#NEXUS BEGIN DATA; DIMENSIONS NTAX=9 NCHAR=230; FORMAT DATATYPE=DNA MISSING=? GAP=- ; MATRIX Callisia_cordifolia_83197_5S.c TGGGAAGTCCTTGTGTTGCATCCCTTTTTGCCGCT------------CGAACTCCATATATCCTATGAGCTAT-CCGC-CTATTATACTACGCCGATA---TATCGGTTT--TTTCCACCGCTC----TAATATATCATC--TCCCCCCACG---AACCCTCCCCGCG----ACGGCATTA-ATACATTTCACAACCATTGTCTTTCGGATGCGATCATACCAGCGCGAC [197] Callisia_repens_82291_5S.cn TGGGAAGTCCTTGTGTTGCACCCCTTTTT------------------TGATCCGTGCACGTCTTAC---CTATACCGT-ATATTCCCTCGC-CCAACA------CGATTT--TC-------CTT----TTTTATA--------------ACG---AACC-TCCCCGCG----ATAGCCTTATATACATTTACTTACCATACTCTTTCCGGTGCGATCATACCAGCACTAC [166] Callisia_graminea_93L1_5S.cn TGGGAAGTCCTTGTGTTGCATCCCTTTTT-------------------GCCGCGTCTCCATCCTAC---CCACGCCGT-ATAAAAACCCGT-CCTTCA---TAGTGACATCGTATCGAGCGCCT----CCGC---CCTTT--TTACCTCCCGTTCCCCCCCTCCCGCG----ACGCCATTA-GTACGTTTATCGAGCAAACCCTCCCGGATGCGATCATACCAGCACGAC [189] Callisia_navicularis_80410_5S. TGGGAAGTCCTTGTGTTGCATCCCTTTTT-------------------GCCCCGACTGCCTCTTAT---CTGTACCGT---AAAAACACGG-T-TTTA---AACCTATCCCGTAAAAAAAACCC----AAGCATTCTTTT--TTTCCCACCTTTCACCCCTCCTCACG----ACGGCATTA-ATACATTTCCCTGCCATACCCTTTCGGATGCGATCATACCAGCACGAC [189] Tripogandra_serrulata_UGA01_5S TGGGAAGTCCTTGTGTTGCATCCCTTTTT-------------------GCTACCCGTCCATCC-AC---CTATTTTTT-ATACGACGGCGCCGATATA---TCTTTGCCCCGGTTAAACAACGC----CGATATATTTAT--ATTTCCCCCT---ATTTTCCCACACGGTATATAGC-TTAAATATATTTCACGAATGTACTCTTACGGATGCGATCATACCAGCGCGAC [193] Callisia_fragrans_93091_5S.cn TGGGAAGTCCTTGTGTTGCACCCCTTTTT------------------TGCACCCCGTGCATCTCAC---CTATACAAG-AAATACACTCGT-CAAACAGGCTTTTCATCTT-TATGCACTCGTC----AAACACGATTTTCATTTTTTCACTTTCGAACCTCACCTCG----ATAGCCTTATATACATTCACTCACCATTCTCTTTCGGGTGCGATCATACCAGCACGAC [198] Gibasis_consobrina_18843_5S.cn TGGGAAGTCCTTGTGTTGCACCCCTTTTTATTTTTTTTCCCAACG---GCTCAATCTGCATATAACCTATAAAAACTT-ACTTTTAATTACCTCTTTAA--TCGCGACCTCCAATTGTATTTTTTCAATTATATGCTGACCGCTACTTTTAGCTGTCTTTTTACCTCGAAACACAGCATAA-CTGCATTTCCTTGCCACACTCTTTCGGGTGCGATCATACCAGCACTAC [223] Gibasis_karwinskyana_18844_5S. TGGGAAGTCCTTGTGTTGCACCCCTTTTTATTTTTTTCCCCGATTCTCGCTCAGTGTGCGTGCAACCTATTATATTTTTACTTTTAACTGCCCTTTTAA--TCACCGCCTCTTATTATATTTTT--ACTTGTATATTGACAGCTACTTTTAACTACGTTTTTACCTCGAGCGACAGCATAA-CTACATTTCCTGACTATACTCTTTCGGGTGCGATCATACCAGCACGAC [225] Gibasis_pellucida_G02_5S.cn TGGGAAGTCCTTGTGTTGCACCCCTTCTTATTTTTTTCCCCAACG---ACTCCATGCGCATATTACCTATAAAACCTT-ACTTTTAATTACCTTTTTAA--TCACGACTCCTAATTGCATTTCTT--TTTATGTATTGACCGCTACTCTTAACTTACTTTTTACCTCCAAAGAGAGCATAA-CTATATTTCCTGACCATACTCCTTCGGGTGCGATCATACCAGCACGAC [221] ; END; begin taxa; dimensions ntax=9; taxlabels 'Callisia_cordifolia_83197_5S.c' 'Callisia_repens_82291_5S.cn' 'Callisia_graminea_93L1_5S.cn' 'Callisia_navicularis_80410_5S.' 'Callisia_fragrans_93091_5S.cn' 'Gibasis_consobrina_18843_5S.cn' 'Gibasis_pellucida_G02_5S.cn' 'Gibasis_karwinskyana_18844_5S.' Tripogandra_serrulata_UGA01_5S ; end; begin trees; tree PAUP_1 = [&R] [&R=true](('Callisia_cordifolia_83197_5S.c':100.0,'Callisia_repens_82291_5S.cn':100.0,('Callisia_graminea_93L1_5S.cn':100.0,'Callisia_navicularis_80410_5S.':100.0):55.0,'Callisia_fragrans_93091_5S.cn':100.0,(('Gibasis_consobrina_18843_5S.cn':100.0,'Gibasis_pellucida_G02_5S.cn':100.0):70.0,'Gibasis_karwinskyana_18844_5S.':100.0):100.0):100.0,Tripogandra_serrulata_UGA01_5S:0.0); end; begin figtree; set appearance.backgroundColour=#-1; set appearance.branchColorAttribute="User Selection"; set appearance.branchLineWidth=2.0; set appearance.foregroundColour=#-16777216; set appearance.selectionColour=#-2144520576; set branchLabels.displayAttribute="Branch times"; set branchLabels.fontName="sansserif"; set branchLabels.fontSize=8; set branchLabels.fontStyle=0; set branchLabels.isShown=false; set branchLabels.significantDigits=4; set layout.expansion=0; set layout.layoutType="RECTILINEAR"; set layout.zoom=0; set nodeBars.barWidth=4.0; set nodeLabels.displayAttribute="Node ages"; set nodeLabels.fontName="sansserif"; set nodeLabels.fontSize=8; set nodeLabels.fontStyle=0; set nodeLabels.isShown=false; set nodeLabels.significantDigits=4; set polarLayout.alignTipLabels=false; set polarLayout.angularRange=0; set polarLayout.rootAngle=0; set polarLayout.rootLength=100; set polarLayout.showRoot=true; set radialLayout.spread=0.0; set rectilinearLayout.alignTipLabels=false; set rectilinearLayout.curvature=0; set rectilinearLayout.rootLength=100; set scale.offsetAge=0.0; set scale.rootAge=1.0; set scale.scaleFactor=1.0; set scale.scaleRoot=false; set scaleAxis.automaticScale=true; set scaleAxis.fontSize=8.0; set scaleAxis.isShown=false; set scaleAxis.lineWidth=1.0; set scaleAxis.majorTicks=1.0; set scaleAxis.origin=0.0; set scaleAxis.significantDigits=4; set scaleBar.automaticScale=true; set scaleBar.fontSize=10.0; set scaleBar.isShown=true; set scaleBar.lineWidth=1.0; set scaleBar.scaleRange=0.0; set scaleBar.significantDigits=4; set tipLabels.displayAttribute="Names"; set tipLabels.fontName="sansserif"; set tipLabels.fontSize=8; set tipLabels.fontStyle=0; set tipLabels.isShown=true; set tipLabels.significantDigits=4; set trees.order=false; set trees.orderType="increasing"; set trees.rooting=false; set trees.rootingType="User Selection"; set trees.transform=false; set trees.transformType="cladogram"; end;