#NEXUS [MacClade 4.08 registered to Kelly Craven, Noble] BEGIN DATA; DIMENSIONS NTAX=38 NCHAR=777; FORMAT DATATYPE=DNA MISSING=~ GAP=. INTERLEAVE ; MATRIX [ 10 20 30 40 50] [ . . . . .] Epichloe_amarillans_So GTTGACTTTGACCTGTATCATTCGATGTATTGGATAACAGTTGCTAACTT [50] Epichloe_amarillans_Ah GTTGACTTTGACCTGTATCATTCGATGTATTGGATAACAGTTGCTAACTT [50] Epichloe_baconii_Cv GTTGACTTTGACCTGTATCATTCGATGTATTGGATAACAGTTGCTAACTT [50] Epichloe_baconii_As GTTGACTTTGACCTGTATCATTTGATGTATTGGATAACAGTTGCTAACTT [50] Epichloe_baconii_At GTTGACTTTGACCTGTATCATTTGATGTATTGGATAACAGTTGCTAACTT [50] Epichloe_brachyelytri_Bee1 GTCGACTTTGACCTGTATCATTCGATGTATTGGAAAACAGTTGCTAACTT [50] Epichloe_brachyelytri_Bee2 GTCGACTTTGACCTGTATCATTCGATGTATTGGAAAACAGTTGCTAACTT [50] Epichloe_bromicola_Be1 GTTGACTTTGACCTGTATCATTCGATGTATTGGATAACAGTCGCTAACTT [50] Epichloe_bromicola_Be2 GTTGACTTTGACCTGTATCATTCGATGTATTGGATAACAGTCGCTAACTT [50] Epichloe_clarkii_Hl GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGCTGCTAACTT [50] Epichloe_elymi_Evr GTTTACTTTGACCTGTATCATTCGATGTATCGGATAACAGTTGCTAACTT [50] Epichloe_elymi_Ec GTTTACTTTGACCTGTATCATTCGATGTATCGGATAACAGTTGCTAACTT [50] Epichloe_festucae_Frr GTTGACTTTGACCTGTATCATTCGATGTATTGGATAACAGTTGCTGACTT [50] Epichloe_glyceriae_Gs1 GTTGACTTTGACCTGTATCATTCGATGTATTGGATACCAGTTGCTAACTT [50] Epichloe_glyceriae_Gs2 GTTGACTTTGACCTGTATCATTCGATGTATTGGATACCAGTTGCTAACTT [50] Epichloe_sylvatica_Bs1 GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGTTGCTAACTT [50] Epichloe_sylvatica_Bs2 GTTGACTTTGCCCTGTATCGCTCGATGTATCGGATAACAGTTGCTAACTT [50] Epichloe_typhina_Lp1 GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGCTGCTAACTT [50] Epichloe_typhina_Bp1 GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGTTGCTAACTT [50] Epichloe_typhina_Dg1 GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGCTGCTAACTT [50] Epichloe_typhina_Ps1 GTTGACTTTAACCTTTATCGCTCGATGTATTGGATAACAGCTGCTAACTT [50] Epichloe_typhina_Pn1 GTTGACTTTGACCTGTATCGTTCGATGTATTGGATAACAGTTGCTAACTT [50] Epichloe_typhina_Pp1 GTTGACTTTGACCTGTATCGTTCGATGTATTGGATAACAGTTGCTAACTT [50] Neotyphodium_x_schardlii_Ca1 GTTGACTTTGACCTGTATCGTTCGATGTATTGGATAACAGTTGCTAACTT [50] Neotyphodium_x_schardlii_Ca2 GTTGACTTTGACCTGTATCGTTCGATGTATTGGATAACAGTTGCTAACTT [50] Epichloe_typhina_Pp2 GTTGACTTTGACCTGTATCGTTCGATGTATTGGATAACAGTTGCTAACTT [50] Epichloe_typhina_Pp3 GTTGACTTTGACCTGTATCGTTCGATGTATTGGATAACAGTTGCTAACTT [50] Epichloe_typhina_Pn2 GTTGACTTTGACCTGTATCGTTCGATGTATTGGATAACAGTTGCTAACTT [50] Epichloe_typhina_Pn3 GTTGACTTTGACCTGTATCGTTCGATGTATTGGATAACAGTTGCTAACTT [50] Epichloe_typhina_Ps2 GTTGACTTTAACCTTTATCGCTCGATGTATTGGATAACAGCTGCTAACTT [50] Epichloe_typhina_Pp4 GTTGACTTTAACCTGTATCGCTCGATGTATTGGATAACAGCTGCTAACTT [50] Epichloe_typhina_Pp5 GTTGACTTTAACCTTTATCGCTCGATGTATTGGATAACAGCTGCTAACTT [50] Epichloe_typhina_Dg2 GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGCTGCTAACTT [50] Epichloe_typhina_Bp2 .......................GATGTATTGGATAACAGTTGCTAACTT [27] Epichloe_typhina_Bp3 GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGTTGCTAACTT [50] Epichloe_typhina_Ao GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGCTGCTAACTT [50] Epichloe_typhina_Lp2 GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGCTGCTAACTT [50] Epichloe_typhina_Lp3 GTTGACTTTGACCTGTATCGCTCGATGTATTGGATAACAGCTGCTAACTT [50] [ 60 70 80 90 100] [ . . . . .] Epichloe_amarillans_So GTTTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAA [100] Epichloe_amarillans_Ah GTTTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAA [100] Epichloe_baconii_Cv GTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAA [100] Epichloe_baconii_As GTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAA [100] Epichloe_baconii_At GTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAA [100] Epichloe_brachyelytri_Bee1 GTCTTCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAA [100] Epichloe_brachyelytri_Bee2 GTCTTCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAA [100] Epichloe_bromicola_Be1 AACTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTCGCCGAAA [100] Epichloe_bromicola_Be2 AACTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTCGCCGAAA [100] Epichloe_clarkii_Hl GTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAA [100] Epichloe_elymi_Evr GTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAA [100] Epichloe_elymi_Ec GTCTGCTAACAGGGGTACGTACTGCGAAATATCACTCGCCGTTGCCGAAA [100] Epichloe_festucae_Frr GTCTGCCAACAGGGGTACGTACTGCAAAATATCACTCGCCGCTGCCGAAA [100] Epichloe_glyceriae_Gs1 GTCTGCTAACAGGGGTGCGTACTGCGAAATATCACTCGCCGTTGCCGAAA [100] Epichloe_glyceriae_Gs2 GTCTGCTAACAGGGGTGCGTACTGCGAAATATCACTCGCCGTTGCCGAAA [100] Epichloe_sylvatica_Bs1 GTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAA [100] Epichloe_sylvatica_Bs2 GTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Lp1 GTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Bp1 GTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Dg1 GTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Ps1 GTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Pn1 GTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Pp1 GTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAA [100] Neotyphodium_x_schardlii_Ca1 GTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAA [100] Neotyphodium_x_schardlii_Ca2 GTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Pp2 GTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Pp3 GTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Pn2 GTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Pn3 GTCTGCTAACAGGGGTACGTACTGCGAAATAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Ps2 GTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Pp4 GTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Pp5 GTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Dg2 GTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Bp2 GTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAA [77] Epichloe_typhina_Bp3 GTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Ao GTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Lp2 GTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAA [100] Epichloe_typhina_Lp3 GTCTGCCAACAGGGGTACGTACTGCGAAGTAACACTCGCCGTTGCCGAAA [100] [ 110 120 130 140 150] [ . . . . .] Epichloe_amarillans_So TTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCAC [150] Epichloe_amarillans_Ah TTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCAC [150] Epichloe_baconii_Cv TTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCAC [150] Epichloe_baconii_As TTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCAC [150] Epichloe_baconii_At TTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCAC [150] Epichloe_brachyelytri_Bee1 TTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCAC [150] Epichloe_brachyelytri_Bee2 TTCACGTACTGACTGAAGCGTagcCACGTCGACTCTGGCAAGTCTACCAC [150] Epichloe_bromicola_Be1 TTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCAC [150] Epichloe_bromicola_Be2 TTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCAC [150] Epichloe_clarkii_Hl TTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_elymi_Evr TTGACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCAC [150] Epichloe_elymi_Ec TTGACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCAC [150] Epichloe_festucae_Frr TTCACGTACTGACTGAAGCGTAGCCACGTCGATTCTGGCAAGTCTACCAC [150] Epichloe_glyceriae_Gs1 TTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCAC [150] Epichloe_glyceriae_Gs2 TTCACGTACTGACTGAAGCGTAGCCACGTCGACTCTGGCAAGTCTACCAC [150] Epichloe_sylvatica_Bs1 TTCACGTACTGACTGAAGCGTAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_sylvatica_Bs2 TTCACATACTGACTGAAGCGTAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Lp1 TTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Bp1 TTCACGTACTGACTGAAGCGTAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Dg1 TTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Ps1 TTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Pn1 TTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Pp1 TTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Neotyphodium_x_schardlii_Ca1 TTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Neotyphodium_x_schardlii_Ca2 TTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Pp2 TTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Pp3 TTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Pn2 TTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Pn3 TTCACGTACTGACAGAAGTGTAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Ps2 TTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Pp4 TTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Pp5 TTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Dg2 TTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Bp2 TTCACGTACTGACTGAAGCGTAGCCACGTCGACTCCGGCAAGTCTACCAC [127] Epichloe_typhina_Bp3 TTCACGTACTGACTGAAGCGTAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Ao TTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Lp2 TTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCAC [150] Epichloe_typhina_Lp3 TTCACGTACTGACTGAAGCGCAGCCACGTCGACTCCGGCAAGTCTACCAC [150] [ 160 170 180 190 200] [ . . . . .] Epichloe_amarillans_So CACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_amarillans_Ah CACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_baconii_Cv CACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_baconii_As CACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_baconii_At CACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_brachyelytri_Bee1 CACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_brachyelytri_Bee2 CACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_bromicola_Be1 CACCGGTCACTTGATTTACCAGTGCGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_bromicola_Be2 CACCGGTCACTTGATTTACCAGTGCGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_clarkii_Hl CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_elymi_Evr CACCGGTCACTTGATTTACCAGTGCGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_elymi_Ec CACCGGTCACTTGATTTACCAGTGCGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_festucae_Frr CACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_glyceriae_Gs1 CACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_glyceriae_Gs2 CACCGGTCACTTGATCTACCAGTGCGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_sylvatica_Bs1 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_sylvatica_Bs2 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Lp1 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Bp1 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Dg1 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Ps1 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Pn1 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Pp1 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Neotyphodium_x_schardlii_Ca1 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Neotyphodium_x_schardlii_Ca2 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Pp2 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Pp3 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Pn2 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Pn3 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Ps2 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Pp4 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Pp5 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Dg2 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Bp2 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [177] Epichloe_typhina_Bp3 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Ao CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Lp2 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] Epichloe_typhina_Lp3 CACCGGTCACTTGATCTACCAATGTGGTGGAATTGACAAGCGTACCATCG [200] [ 210 220 230 240 250] [ . . . . .] Epichloe_amarillans_So AGAAGTTCGAGAAGGTAATATATTGTAC..TCCTCTCACGCATAATATCT [248] Epichloe_amarillans_Ah AGAAGTTCGAGAAGGTAATATATTCTAC..TCCTCTCACGCATAATATCT [248] Epichloe_baconii_Cv AGAAGTTCGAGAAGGTAAGATATTCTAC..CCCTCTCACGCATAATATCT [248] Epichloe_baconii_As AGAAGTTCGAGAAGGTAAGATATTCTAC..CCCTCTCACGCATAATATCT [248] Epichloe_baconii_At AGAAGTTCGAGAAGGTAAGATATTCTAC..CCCTCTCACGCATAATATCT [248] Epichloe_brachyelytri_Bee1 AGAAGTTCGAGAAGGTAAGATATTCTTCTTTCACTTCACGCATAATATGT [250] Epichloe_brachyelytri_Bee2 AGAAGTTCGAGAAGGTAAGATATTCTTCTTTCACTTCACGCATAATATGT [250] Epichloe_bromicola_Be1 AGAAGTTCGAGAAGGTAAGACATTCTTCTTTCACTTCACGCATAATATGT [250] Epichloe_bromicola_Be2 AGAAGTTCGAGAAGGTAAGACATTCTTCTTTCACCTCACGCATAATATGT [250] Epichloe_clarkii_Hl AGAAGTTCGAGAAGGTGAGATATATCTTTTTCACTCCACGCATAATATGT [250] Epichloe_elymi_Evr AGAAGTTCGAGAAGGTAAGATATTCTTCTTTCACTTCACGCATAATATGT [250] Epichloe_elymi_Ec AGAAGTTCGAGAAGGTAAGATATTCTTCTTTCACTTCACGCATAATATGT [250] Epichloe_festucae_Frr AGAAGTTCGAGAAGGTAAGATATTTTAC..CCCTCTCACGCATAATATCC [248] Epichloe_glyceriae_Gs1 AGAAGTTTGAGAAGGTAAGATACTCTTCTTTCACGTCGCGCATAATATGT [250] Epichloe_glyceriae_Gs2 AGAAGTTTGAGAAGGTAAGATACTCTTCTTTCACGTCGCGCATAATATGT [250] Epichloe_sylvatica_Bs1 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_sylvatica_Bs2 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_typhina_Lp1 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_typhina_Bp1 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTTCACGCATAATATGT [250] Epichloe_typhina_Dg1 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_typhina_Ps1 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_typhina_Pn1 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_typhina_Pp1 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Neotyphodium_x_schardlii_Ca1 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Neotyphodium_x_schardlii_Ca2 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_typhina_Pp2 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_typhina_Pp3 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_typhina_Pn2 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_typhina_Pn3 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_typhina_Ps2 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_typhina_Pp4 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_typhina_Pp5 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_typhina_Dg2 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_typhina_Bp2 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTTCACGCATAATATGT [227] Epichloe_typhina_Bp3 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTTCACGCATAATATGT [250] Epichloe_typhina_Ao AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_typhina_Lp2 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] Epichloe_typhina_Lp3 AGAAGTTCGAGAAGGTGAGATATATCTCTTTCACTCCACGCATAATATGT [250] [ 260 270 280 290 300] [ . . . . .] Epichloe_amarillans_So GATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACC [298] Epichloe_amarillans_Ah GATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACC [298] Epichloe_baconii_Cv GATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACC [298] Epichloe_baconii_As GATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACC [298] Epichloe_baconii_At GATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACC [298] Epichloe_brachyelytri_Bee1 GATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACC [300] Epichloe_brachyelytri_Bee2 GATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACC [300] Epichloe_bromicola_Be1 GATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACC [300] Epichloe_bromicola_Be2 GATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACC [300] Epichloe_clarkii_Hl GACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_elymi_Evr GATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACC [300] Epichloe_elymi_Ec GATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACC [300] Epichloe_festucae_Frr GATGTTCACTCGCTGCATTGCGAGCCTGCCTTGTGTGTCGCTTTGCAACC [298] Epichloe_glyceriae_Gs1 GATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACC [300] Epichloe_glyceriae_Gs2 GATGTTCAGTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACC [300] Epichloe_sylvatica_Bs1 GACGTTCAGTCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_sylvatica_Bs2 GACGTTCAGTCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_typhina_Lp1 GACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_typhina_Bp1 GACGTTCAATCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_typhina_Dg1 GACGTTCAGTCGTTGCAATTCGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_typhina_Ps1 GACGTTCAGTCGTTGCAACGCGAGCCTGCCTTGCGTGTCGCTTTGCAACT [300] Epichloe_typhina_Pn1 GACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_typhina_Pp1 GACGTTCAGTCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Neotyphodium_x_schardlii_Ca1 GACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Neotyphodium_x_schardlii_Ca2 GACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_typhina_Pp2 GACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_typhina_Pp3 GACGTTCAGTCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_typhina_Pn2 GACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_typhina_Pn3 GACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_typhina_Ps2 GACGTTCAGTCGTTGCAACGCGAGCCTGCCTTGCGTGTCGCTTTGCAACT [300] Epichloe_typhina_Pp4 GACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_typhina_Pp5 GACGTTCAGTCGTTGCAACGCGAGCCTGCCTTGCGTGTCGCTTTGCAACT [300] Epichloe_typhina_Dg2 GACGTTCAGTCGTTGCAATTCGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_typhina_Bp2 GACGTTCAATCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACC [277] Epichloe_typhina_Bp3 GACGTTCAATCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_typhina_Ao GACGTTCAGTCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_typhina_Lp2 GACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] Epichloe_typhina_Lp3 GACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACC [300] [ 310 320 330 340 350] [ . . . . .] Epichloe_amarillans_So T...TGGGTGG....GCAAGCAAGCGACTTGCCCGCCCACCAAAGCCCCT [341] Epichloe_amarillans_Ah T...T.GGTGG....GCAAGCAAGCGACTTGCCCGCCCACCAAAGCCCCT [340] Epichloe_baconii_Cv T...T.GGTGG....GCAAGCAAGCGACTT..............GCCCCT [326] Epichloe_baconii_As T...T.GGTGG....GCAAGCAAGCGACTT.............TGCCCCT [327] Epichloe_baconii_At T...T.GGTGG....GCAAGCAAGCGACTT.............TGCCCCT [327] Epichloe_brachyelytri_Bee1 T...T.AGTGG....GCAAGCAAGCATCT...............GCCCCT [327] Epichloe_brachyelytri_Bee2 T...T.GGTGG....GCAAGCAAGCATCT...............GCCCCT [327] Epichloe_bromicola_Be1 T...T.GGTGG....GCGAGCAAGCATCT...............GCCCCT [327] Epichloe_bromicola_Be2 T...T.GGTGG....GCGAGCAAGCATCT...............GCCCCT [327] Epichloe_clarkii_Hl TCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT [329] Epichloe_elymi_Evr T...T.GGTGG....GCAAGCAAGCATCT...............GCCCCT [327] Epichloe_elymi_Ec T...T.GGTGG....GCAAGCAAGCATCT...............GCCCCT [327] Epichloe_festucae_Frr T...T.GGTGG....GCAAGCAAGCGACTT..............GCCCCT [326] Epichloe_glyceriae_Gs1 T...T.GGTGGGCAAGCAAGCAAGCAACT...............GCCCCT [331] Epichloe_glyceriae_Gs2 T...T.GGTGGGCAAGCAAGCAAGCAACT...............GCCCCT [331] Epichloe_sylvatica_Bs1 T...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT [327] Epichloe_sylvatica_Bs2 T...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT [327] Epichloe_typhina_Lp1 TCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT [329] Epichloe_typhina_Bp1 T...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT [327] Epichloe_typhina_Dg1 TCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT [329] Epichloe_typhina_Ps1 TCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT [329] Epichloe_typhina_Pn1 T...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT [327] Epichloe_typhina_Pp1 T...T.GGTGG....GCAAGCAAGCGACT...............GCTCCT [327] Neotyphodium_x_schardlii_Ca1 T...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT [327] Neotyphodium_x_schardlii_Ca2 T...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT [327] Epichloe_typhina_Pp2 T...T.GGTGG....GCAAGCAAGCGACT...............GCTCCT [327] Epichloe_typhina_Pp3 T...T.GGTGG....GCAAGCAAGCGACT...............GCTCCT [327] Epichloe_typhina_Pn2 T...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT [327] Epichloe_typhina_Pn3 T...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT [327] Epichloe_typhina_Ps2 TCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT [329] Epichloe_typhina_Pp4 TCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT [329] Epichloe_typhina_Pp5 TCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT [329] Epichloe_typhina_Dg2 TCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT [329] Epichloe_typhina_Bp2 T...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT [304] Epichloe_typhina_Bp3 T...T.GGTGG....GCAAGCAAGCGACT...............GCCCCT [327] Epichloe_typhina_Ao TCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT [329] Epichloe_typhina_Lp2 TCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT [329] Epichloe_typhina_Lp3 TCAA..GGTGG....GCAAGCAAGCGACT...............GCCCCT [329] [ 360 370 380 390 400] [ . . . . .] Epichloe_amarillans_So .CTTTTTCGCCCGCGATACGAA..TTTTTTTTTTTT...CGGTCGCGGGG [385] Epichloe_amarillans_Ah TC.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTT..CGGTCGCGGGG [385] Epichloe_baconii_Cv .CTTTTTCGCCCGCGATACGAAA.TTTTTTTTT......CGGTCGCGGGG [368] Epichloe_baconii_As .C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTT..CGGTCGCGGGG [371] Epichloe_baconii_At .C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTT..CGGTCGCGGGG [371] Epichloe_brachyelytri_Bee1 .C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTT....CGGTCGCGGGG [369] Epichloe_brachyelytri_Bee2 .C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTT....CGGTCGCGGGG [369] Epichloe_bromicola_Be1 .C.TTTTCGCCCGCGATACGAA.CTTTTTTTTTTTTTT.CGGTCGCGGGG [373] Epichloe_bromicola_Be2 .C.TTTTCGCCCGCGATACGAA.CTTTTTTTTTTT....CGGTCGCGGGG [370] Epichloe_clarkii_Hl .C.TCTTCGCCCGCGATACGAA..TTTTTTTTTTT....CGGTCGCGGGG [371] Epichloe_elymi_Evr .C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTTTTCGGTCGCGGGG [373] Epichloe_elymi_Ec .C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTTTTCGGTCGCGGGG [373] Epichloe_festucae_Frr .C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTT..CGGTCGCGGGG [370] Epichloe_glyceriae_Gs1 .C.TTTTCGCCCGCGATTCGAA..TTTTTTTTTTTTT..CGGTCGCGGGG [375] Epichloe_glyceriae_Gs2 .C.TTTTCGCCCGCGATTCGAA..TTTTTTTTTTTTT..CGGTCGCGGGG [375] Epichloe_sylvatica_Bs1 .C.TTTTCGCCCGCGATACGAAA.TTTTTTTTTTTTT..CGGTCGCGGGG [372] Epichloe_sylvatica_Bs2 .C.TTTTCGCCCGCGATACGAAA.TTTTTTTTTTTTT..CAGTCGCGGGG [372] Epichloe_typhina_Lp1 .C.TTTTCGCCCGCGATACGA...TTTTTTTTTTTTTTTCGGTCGCGGGG [374] Epichloe_typhina_Bp1 .C.TTTTCGACCGCGATACGAA..TTTTTTTTTTTT...CGGTCGCGGGG [370] Epichloe_typhina_Dg1 .C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTT..CGGTCGCGGGG [373] Epichloe_typhina_Ps1 .C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTTTTTGGTCGCGGGG [375] Epichloe_typhina_Pn1 .C.TTTTCGCCCGCGATACGAAA.TTTTTTTTTTT....CGGTCGCGGGG [370] Epichloe_typhina_Pp1 .C.TTTTCGCCCGCGATACGA..GTTTTTTTTTTTTTTTCGGTCGCGGGG [373] Neotyphodium_x_schardlii_Ca1 .C.TTTTCGCCCGCGATACGAG.GTTTTTTTTTTTT...CGGTCGCGGGG [371] Neotyphodium_x_schardlii_Ca2 .C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTT...CGGTCGCGGGG [370] Epichloe_typhina_Pp2 .C.TTTTCGCCCGCGATACGAG..TTTTTTTTTTTTTT.CGGTCGCGGGG [372] Epichloe_typhina_Pp3 .C.TTTTCGCCCGCGATACGAG..TTTTTTTTTTTTTTTCGGTCGCGGGG [373] Epichloe_typhina_Pn2 .C.TTTTCGCCCGCGATACGAAA.TTTTTTTTTTT....CGGTCGCGGGG [370] Epichloe_typhina_Pn3 .C.TTTTCGCCCGCGATACGAAA.TTTTTTTTTTT....CGGTCGCGGGG [370] Epichloe_typhina_Ps2 .C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTTTTTGGTCGCGGGG [375] Epichloe_typhina_Pp4 .C.TTTTCGCCCGCGATACGA...TTTTTTTTTTTTTT.CGGTCGCGGGG [373] Epichloe_typhina_Pp5 .C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTTTTTGGTCGCGGGG [375] Epichloe_typhina_Dg2 .C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTTT..CGGTCGCGGGG [373] Epichloe_typhina_Bp2 .C.TTTTCGACCGCGATACGAA..TTTTTTTTTTTT...CGGTCGCGGGG [347] Epichloe_typhina_Bp3 .C.TTTTCGACCGCGATACGAA..TTTTTTTTTTTT...CGGTCGCGGGG [370] Epichloe_typhina_Ao .C.TTTTCGCCCGCGATACGAA..TTTTTTTTTTTT...CGGTCGCGGGG [372] Epichloe_typhina_Lp2 .C.TTTTCGCCCGCGATACGA...TTTTTTTTTTTTTTTCGGTCGCGGGG [374] Epichloe_typhina_Lp3 .C.TTTTCGCCCGCGATACGA...TTTTTTTTTTTTTTTCGGTCGCGGGG [374] [ 410 420 430 440 450] [ . . . . .] Epichloe_amarillans_So CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCTTGA [434] Epichloe_amarillans_Ah CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCTTGA [434] Epichloe_baconii_Cv CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.AA [416] Epichloe_baconii_As CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCTTGA [420] Epichloe_baconii_At CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCTTGA [420] Epichloe_brachyelytri_Bee1 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTTGGTCT.GA [418] Epichloe_brachyelytri_Bee2 CTCAGTCTGACTTTtGGTGGGgCACCTCTCAACCCGTCACTTGGTCT.GA [418] Epichloe_bromicola_Be1 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.AA [421] Epichloe_bromicola_Be2 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.AA [418] Epichloe_clarkii_Hl CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [419] Epichloe_elymi_Evr CTCAGTCTGACTTTTGGTGGGGCACCTCTCTACCCGTCACT.GGTCT.AA [421] Epichloe_elymi_Ec CTCAGTCTGACTTTTGGTGGGGCACCTCTCTACCCGTCACT.GGTCT.AA [421] Epichloe_festucae_Frr CTCAGTATGACTTTTGGTGGGGCACCT.TCAACCCGTCACT.GGTCTTGA [418] Epichloe_glyceriae_Gs1 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GTTAT.GA [423] Epichloe_glyceriae_Gs2 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GTTAT.GA [423] Epichloe_sylvatica_Bs1 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [420] Epichloe_sylvatica_Bs2 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [420] Epichloe_typhina_Lp1 CTCAGTTTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [422] Epichloe_typhina_Bp1 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [418] Epichloe_typhina_Dg1 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [421] Epichloe_typhina_Ps1 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [423] Epichloe_typhina_Pn1 CTCAGTCTGACTTTTGGTGGGGCACCTCTTAACCCGTCACT.GGTCT.GT [418] Epichloe_typhina_Pp1 CTCAGTCTGACTTTTGGTGGGGCATCTCTCAACCCGTCACT.GGTCT.GT [421] Neotyphodium_x_schardlii_Ca1 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [419] Neotyphodium_x_schardlii_Ca2 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTTACT.GGTCT.GT [418] Epichloe_typhina_Pp2 CTCAGTCTGACTTTTGGTGGGGCATCTCTCAACCCGTCACT.GGTCT.GT [420] Epichloe_typhina_Pp3 CTCAGTCTGACTTTTGGTGGGGCATCTCTCAACCCGTCACT.GGTCT.GT [421] Epichloe_typhina_Pn2 CTCAGTCTGACTTTTGGTGGGGCACCTCTTAACCCGTCACT.GGTCT.GT [418] Epichloe_typhina_Pn3 CTCAGTCTGACTTTTGGTGGGGCACCTCTTAACCCGTCACT.GGTCT.GT [418] Epichloe_typhina_Ps2 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [423] Epichloe_typhina_Pp4 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [421] Epichloe_typhina_Pp5 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [423] Epichloe_typhina_Dg2 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [421] Epichloe_typhina_Bp2 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [395] Epichloe_typhina_Bp3 CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [418] Epichloe_typhina_Ao CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [420] Epichloe_typhina_Lp2 CTCAGTTTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [422] Epichloe_typhina_Lp3 CTCAGTTTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT.GGTCT.GT [422] [ 460 470 480 490 500] [ . . . . .] Epichloe_amarillans_So GCTAGAAGAC.GCAAACGAGAGAGACATGA.....CATGACATTCGCGTG [478] Epichloe_amarillans_Ah GCTAGAAGAC.GCAAACGAGAGAGACATGA.....CATGACATTCGCGTG [478] Epichloe_baconii_Cv GCTAGAAGAC.GCAAAC..GAGAGACATGA.....CATGACATTCGCGTG [458] Epichloe_baconii_As GCTTGAAGAC.GCAAACGAGAGAGACAGAA.....CATGACATTCGCGTG [464] Epichloe_baconii_At GCTTGAAGAC.GCAAACGAGAGAGACATGA.....CATGACATTCGCGTG [464] Epichloe_brachyelytri_Bee1 GCTAGA.GAC.GCAAACGAGAGAGACATGA.....CATGACATTCGCGTG [461] Epichloe_brachyelytri_Bee2 GCTAGA.GAC.GCAAACGAGAGAGACATGA.....CATGACATTCGCGTG [461] Epichloe_bromicola_Be1 GCTAGA.GAC.GCAAACGAGAGAGTCATGA.....CATGACATTCGCGTG [464] Epichloe_bromicola_Be2 GCTAGA.GAC.GCAAACGAGAGAGTCATGA.....CATGACATTCGCGTG [461] Epichloe_clarkii_Hl GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTG [460] Epichloe_elymi_Evr GCTAGA.GAC.GCAAACGAGAGAGACATGA.....CATGGGATTCGCGTG [464] Epichloe_elymi_Ec GCTAGA.GAC.GCAAACGAGAGAGACATGA.....CATGGGATTCGCGTG [464] Epichloe_festucae_Frr GCTAAAAAAC.GCAAACGAGAAAGACATGA.....CATGACATTCGCGTG [462] Epichloe_glyceriae_Gs1 GCTAGA.GAC.GCAAACGAGAGAGACATGACATGGCATGACATTCGCGTG [471] Epichloe_glyceriae_Gs2 GCTAGA.GAC.GCAAACGAGAGAGACATGACATGGCATGACATTCGCGTG [471] Epichloe_sylvatica_Bs1 GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTG [461] Epichloe_sylvatica_Bs2 GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTG [461] Epichloe_typhina_Lp1 GCTAGA.GAC.GCAAACGAGAGATACA..A.....CATGACATTCGCGTG [463] Epichloe_typhina_Bp1 GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTG [459] Epichloe_typhina_Dg1 GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTG [462] Epichloe_typhina_Ps1 GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTG [464] Epichloe_typhina_Pn1 GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTG [459] Epichloe_typhina_Pp1 GCTAGA.GAC.GCAAACGAGAGAAATA..A.....CATGACATTCGCGTG [462] Neotyphodium_x_schardlii_Ca1 GCTAGA.GAC.GCAAACGAGAGAAATA..A.....CATGACATTCGCGTG [460] Neotyphodium_x_schardlii_Ca2 GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGATATTCGCGTG [459] Epichloe_typhina_Pp2 GCTAGA.GAC.GCAAACGAGAGAAATA..A.....CATGACATTCGCGTG [461] Epichloe_typhina_Pp3 GCTAGA.GAC.GCAAACGAGAGAAATA..A.....CATGACATTCGCGTG [462] Epichloe_typhina_Pn2 GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTG [459] Epichloe_typhina_Pn3 GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTG [459] Epichloe_typhina_Ps2 GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTG [464] Epichloe_typhina_Pp4 GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTG [462] Epichloe_typhina_Pp5 GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTG [464] Epichloe_typhina_Dg2 GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTG [462] Epichloe_typhina_Bp2 GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTG [436] Epichloe_typhina_Bp3 GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTG [459] Epichloe_typhina_Ao GCTAGA.GAC.GCAAACGAGAGATATA..A.....CATGACATTCGCGTG [461] Epichloe_typhina_Lp2 GCTAGA.GAC.GCAAACGAGAGATACA..A.....CATGACATTCGCGTG [463] Epichloe_typhina_Lp3 GCTAGA.GAC.GCAAACGAGAGATACA..A.....CATGACATTCGCGTG [463] [ 510 520 530 540 550] [ . . . . .] Epichloe_amarillans_So G..............CCCCCC....AAAAAAAA.TTGTGATTAAAAATCA [509] Epichloe_amarillans_Ah G..............CCCCCC....AAAAAAAA.TTGTGATTAAAAATCA [509] Epichloe_baconii_Cv G..............CCTCCC...AAAAAAAAA.TTGTGATGACAAATTA [490] Epichloe_baconii_As G..............CCCCCC....AAAAAAAA.TTGCGATAAAAAATCA [495] Epichloe_baconii_At G..............CCCCCC....AAAAAAAA.TTGCGATAAAAAATCA [495] Epichloe_brachyelytri_Bee1 A..............CCTCCC....AAAAAAAA.TTGTGATGACAAATCA [492] Epichloe_brachyelytri_Bee2 G..............CCTCCC....AAAAAAAA.TTGTGATGACAAATCA [492] Epichloe_bromicola_Be1 ..............CCCTCCC...AAAAAAAAA.CTGTGATGACAAATCA [496] Epichloe_bromicola_Be2 ..............CCCTCCC..AAAAAAAAAAA..GTGATGACAAATCA [493] Epichloe_clarkii_Hl A..............CCTCCC.....AAAAAAA.TTGTGATGACAAATCA [490] Epichloe_elymi_Evr G..............CCTCCC....AAAAAAAA.CTGTGATGACAAATCA [495] Epichloe_elymi_Ec G..............CCTCCC....AAAAAAAA.CTGTGATGACAAATCA [495] Epichloe_festucae_Frr GCCCACCTCTCCCCCCCCCCCCC....AACAAA.TTGTGATAAAAAATCA [507] Epichloe_glyceriae_Gs1 G..............CCTCCC...AAAAAAAAA.CTGTGATGACAAATCA [503] Epichloe_glyceriae_Gs2 G..............CCTCCC...AAAAAAAAA.CTGTGATGACAAATCA [503] Epichloe_sylvatica_Bs1 A..............CCTCCC....AAAAAAAA.TTGTGATGACAAATCA [492] Epichloe_sylvatica_Bs2 A..............CCTCCC.....AAAAAAA.TTGTGATGACAAATCA [491] Epichloe_typhina_Lp1 A..............TCTCCC....AAAAAAAA..TGTGATGACAAATCA [493] Epichloe_typhina_Bp1 A..............CGTCCC.....AAAAAAA.TTGTGATGACAAATCA [489] Epichloe_typhina_Dg1 A..............TCTCCC....AAAAAAAA..TGTGATGACAAATCA [492] Epichloe_typhina_Ps1 A..............CCTCCC.....AAAAAAA.TTGTGATGACAAATCA [494] Epichloe_typhina_Pn1 A..............CCTCCC......AAAAAA.TTGTGATGACAAATCA [488] Epichloe_typhina_Pp1 A..............CCTCCC......AAAAAA.TTGTGATGACAAATCA [491] Neotyphodium_x_schardlii_Ca1 A..............CCTCCC......AAAAAA.TTGTGATGACAAATCA [489] Neotyphodium_x_schardlii_Ca2 A..............CCTCCC......AAAAAA.TTGTGATGACAAATCA [488] Epichloe_typhina_Pp2 A..............CCTCCC......AAAAAA.TTGTGATGACAAATCA [490] Epichloe_typhina_Pp3 A..............CCTCCC......AAAAAA.TTGTGATGACAAATCA [491] Epichloe_typhina_Pn2 A..............CCTCCC......AAAAAA.TTGTGATGACAAATCA [488] Epichloe_typhina_Pn3 A..............CCTCCC......AAAAAA.TTGTGATGACAAATCA [488] Epichloe_typhina_Ps2 A..............CCTCCC.....AAAAAAA.TTGTGATGACAAATCA [494] Epichloe_typhina_Pp4 A..............CCTCCC.....AAAAAAA.TTGTGATGACAAATCA [492] Epichloe_typhina_Pp5 A..............CCTCCC.....AAAAAAA.TTGTGATGACAAATCA [494] Epichloe_typhina_Dg2 A..............TCTCCC....AAAAAAAA..TGTGATGACAAATCA [492] Epichloe_typhina_Bp2 A..............CGTCCC.....AAAAAAA.TTGTGATGACAAATCA [466] Epichloe_typhina_Bp3 A..............CGTCCC.....AAAAAAA.TTGTGATGACAAATCA [489] Epichloe_typhina_Ao A..............TCTCCC...AAAAAAAAA..TGTGATGACAAATCA [492] Epichloe_typhina_Lp2 A..............TCTCCC....AAAAAAAA..TGTGATGACAAATCA [493] Epichloe_typhina_Lp3 A..............TCTCCC....AAAAAAAA..TGTGATGACAAATCA [493] [ 560 570 580 590 600] [ . . . . .] Epichloe_amarillans_So CTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [559] Epichloe_amarillans_Ah CTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [559] Epichloe_baconii_Cv CTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [540] Epichloe_baconii_As CTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [545] Epichloe_baconii_At CTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [545] Epichloe_brachyelytri_Bee1 CTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [542] Epichloe_brachyelytri_Bee2 CTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [542] Epichloe_bromicola_Be1 CTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [546] Epichloe_bromicola_Be2 CTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [543] Epichloe_clarkii_Hl CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [540] Epichloe_elymi_Evr CTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [545] Epichloe_elymi_Ec CTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [545] Epichloe_festucae_Frr CTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [557] Epichloe_glyceriae_Gs1 CTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGCTTCTT [553] Epichloe_glyceriae_Gs2 CTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGCTTCTT [553] Epichloe_sylvatica_Bs1 CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [542] Epichloe_sylvatica_Bs2 CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [541] Epichloe_typhina_Lp1 CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [543] Epichloe_typhina_Bp1 CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [539] Epichloe_typhina_Dg1 CTGACTTGTCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [542] Epichloe_typhina_Ps1 CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [544] Epichloe_typhina_Pn1 CTGACTTGCGTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [538] Epichloe_typhina_Pp1 CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [541] Neotyphodium_x_schardlii_Ca1 CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [539] Neotyphodium_x_schardlii_Ca2 CTGACTTGCGTTTTCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [538] Epichloe_typhina_Pp2 CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [540] Epichloe_typhina_Pp3 CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [541] Epichloe_typhina_Pn2 CTGACTTGCGTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [538] Epichloe_typhina_Pn3 CTGACTTGCGTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [538] Epichloe_typhina_Ps2 CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [544] Epichloe_typhina_Pp4 CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [542] Epichloe_typhina_Pp5 CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [544] Epichloe_typhina_Dg2 CTGACTTGTCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [542] Epichloe_typhina_Bp2 CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [516] Epichloe_typhina_Bp3 CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [539] Epichloe_typhina_Ao CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [542] Epichloe_typhina_Lp2 CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [543] Epichloe_typhina_Lp3 CTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTT [543] [ 610 620 630 640 650] [ . . . . .] Epichloe_amarillans_So TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [609] Epichloe_amarillans_Ah TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [609] Epichloe_baconii_Cv TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [590] Epichloe_baconii_As TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [595] Epichloe_baconii_At TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [595] Epichloe_brachyelytri_Bee1 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [592] Epichloe_brachyelytri_Bee2 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [592] Epichloe_bromicola_Be1 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [596] Epichloe_bromicola_Be2 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [593] Epichloe_clarkii_Hl TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [590] Epichloe_elymi_Evr TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [595] Epichloe_elymi_Ec TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [595] Epichloe_festucae_Frr TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [607] Epichloe_glyceriae_Gs1 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [603] Epichloe_glyceriae_Gs2 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [603] Epichloe_sylvatica_Bs1 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [592] Epichloe_sylvatica_Bs2 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [591] Epichloe_typhina_Lp1 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [593] Epichloe_typhina_Bp1 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [589] Epichloe_typhina_Dg1 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [592] Epichloe_typhina_Ps1 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [594] Epichloe_typhina_Pn1 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [588] Epichloe_typhina_Pp1 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [591] Neotyphodium_x_schardlii_Ca1 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [589] Neotyphodium_x_schardlii_Ca2 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [588] Epichloe_typhina_Pp2 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [590] Epichloe_typhina_Pp3 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [591] Epichloe_typhina_Pn2 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [588] Epichloe_typhina_Pn3 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [588] Epichloe_typhina_Ps2 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [594] Epichloe_typhina_Pp4 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [592] Epichloe_typhina_Pp5 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [594] Epichloe_typhina_Dg2 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [592] Epichloe_typhina_Bp2 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [566] Epichloe_typhina_Bp3 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [589] Epichloe_typhina_Ao TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [592] Epichloe_typhina_Lp2 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [593] Epichloe_typhina_Lp3 TCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGT [593] [ 660 670 680 690 700] [ . . . . .] Epichloe_amarillans_So ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [659] Epichloe_amarillans_Ah ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [659] Epichloe_baconii_Cv ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [640] Epichloe_baconii_As ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [645] Epichloe_baconii_At ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [645] Epichloe_brachyelytri_Bee1 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [642] Epichloe_brachyelytri_Bee2 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [642] Epichloe_bromicola_Be1 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [646] Epichloe_bromicola_Be2 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [643] Epichloe_clarkii_Hl ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [640] Epichloe_elymi_Evr ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [645] Epichloe_elymi_Ec ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [645] Epichloe_festucae_Frr ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [657] Epichloe_glyceriae_Gs1 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTTTGT [653] Epichloe_glyceriae_Gs2 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTTTGT [653] Epichloe_sylvatica_Bs1 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [642] Epichloe_sylvatica_Bs2 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [641] Epichloe_typhina_Lp1 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [643] Epichloe_typhina_Bp1 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [639] Epichloe_typhina_Dg1 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [642] Epichloe_typhina_Ps1 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [644] Epichloe_typhina_Pn1 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [638] Epichloe_typhina_Pp1 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [641] Neotyphodium_x_schardlii_Ca1 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [639] Neotyphodium_x_schardlii_Ca2 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [638] Epichloe_typhina_Pp2 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [640] Epichloe_typhina_Pp3 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [641] Epichloe_typhina_Pn2 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [638] Epichloe_typhina_Pn3 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [638] Epichloe_typhina_Ps2 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [644] Epichloe_typhina_Pp4 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [642] Epichloe_typhina_Pp5 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [644] Epichloe_typhina_Dg2 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [642] Epichloe_typhina_Bp2 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [616] Epichloe_typhina_Bp3 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [639] Epichloe_typhina_Ao ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [642] Epichloe_typhina_Lp2 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [643] Epichloe_typhina_Lp3 ATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGT [643] [ 710 720 730 740 750] [ . . . . .] Epichloe_amarillans_So CACCGTCATTGGTAAGCCTTGGTCGACGCATTAGACTC.TTCTCACCCGA [708] Epichloe_amarillans_Ah CACCGTCATTGGTAAGCCTTGGTCGACGCATTAGACTC.TTCTAACCCGA [708] Epichloe_baconii_Cv CACCGTCATTGGTAAGCCTTGGTCGATACACTAGACTC.TATCAACCCGA [689] Epichloe_baconii_As CACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.TACCAACCCGA [694] Epichloe_baconii_At CACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.TACCAACCCGA [694] Epichloe_brachyelytri_Bee1 CACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.TATCTACCCGA [691] Epichloe_brachyelytri_Bee2 CACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.TATCTACCCGA [691] Epichloe_bromicola_Be1 CACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCTTATCAACCTGA [696] Epichloe_bromicola_Be2 CACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTC.TATCAACCTGA [692] Epichloe_clarkii_Hl CACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.TATCTACCCAA [689] Epichloe_elymi_Evr CACCGTCATTGGTAAGCCTTGGTCGACACACTAGACTCTTATCAACCCGA [695] Epichloe_elymi_Ec CACCGTCATTGGTAAGCCTTGGTCGACACACTAGACTCTTATCAACCCGA [695] Epichloe_festucae_Frr CACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.CACCAACCCGA [706] Epichloe_glyceriae_Gs1 CACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.CATCAACCCGA [702] Epichloe_glyceriae_Gs2 CACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.CATCAACCCGA [702] Epichloe_sylvatica_Bs1 CACCGTCATTGGTAAGCCTTGGTCGACAAATTAGACTC.TATCGACCCGA [691] Epichloe_sylvatica_Bs2 CACCGTCATTGGTAAGCCTTGGTCGACAAATTAGACTC.TATCTACCCGA [690] Epichloe_typhina_Lp1 CACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGA [692] Epichloe_typhina_Bp1 CACCGTCATTGGTAAGCCCTGGTCGACAAATTAGACTA.TATCTACCCGA [688] Epichloe_typhina_Dg1 CACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGA [691] Epichloe_typhina_Ps1 CACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGA [693] Epichloe_typhina_Pn1 CACCGTCATTGGTAAGCCTTGATCGACACATTAGACTC.TATTTACCCGA [687] Epichloe_typhina_Pp1 CACCGTCATTGGTAAGCCTTGATCGACACATTAGACTC.TATCTACCCGA [690] Neotyphodium_x_schardlii_Ca1 CACCGTCATTGGTAAGCCTTGATCGACACATTAGACTC.TATCTACCCGA [688] Neotyphodium_x_schardlii_Ca2 CACCGTCATTGGTAAGCCTTGATCGACACATTAGACTC.TATTTACCCGA [687] Epichloe_typhina_Pp2 CACCGTCATTGGTAAGCCTTGATCGACACATTAGACTC.TATCTACCCGA [689] Epichloe_typhina_Pp3 CACCGTCATTGGTAAGCCTTGATCGACACATTAGACTC.TATCTACCCGA [690] Epichloe_typhina_Pn2 CACCGTCATTGGTAAGCCTTGATCGACACATTAGACTC.TATTTACCCGA [687] Epichloe_typhina_Pn3 CACCGTCATTGGTAAGCCTTGATCGACACATTAGACTC.TATTTACCCGA [687] Epichloe_typhina_Ps2 CACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGA [693] Epichloe_typhina_Pp4 CACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTC.TATCTACCCGA [691] Epichloe_typhina_Pp5 CACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGA [693] Epichloe_typhina_Dg2 CACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGA [691] Epichloe_typhina_Bp2 CACCGTCATTGGTAAGCCTCGGTCGACAAATTAGACTA.TATCTACCCGA [665] Epichloe_typhina_Bp3 CACCGTCATTGGTAAGCCCTGGTCGACAAATTAGACTA.TATCTACCCGA [688] Epichloe_typhina_Ao CACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGA [691] Epichloe_typhina_Lp2 CACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGA [692] Epichloe_typhina_Lp3 CACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTC.TACCTACCCGA [692] [ 760 770 ] [ . . ] Epichloe_amarillans_So TCTGCATCATTAACGTGCATCTATTAG [735] Epichloe_amarillans_Ah TCTGCATCATTAACGTGCATCTATTAG [735] Epichloe_baconii_Cv TCTGTATCATTAACGTGCATCTACTAG [716] Epichloe_baconii_As TCTGTATCATTAACGTGCATCTATTAG [721] Epichloe_baconii_At TCTGTATCATTAACGTGCATCTATTAG [721] Epichloe_brachyelytri_Bee1 TCTGTATCATTAACGTGCATCTATTAG [718] Epichloe_brachyelytri_Bee2 TCTGTATCATTAACGTGCATCTATTAG [718] Epichloe_bromicola_Be1 TCTGTATCACTAACGTGCATCTACTAG [723] Epichloe_bromicola_Be2 TCTGTATCACTAACGTGCATCTACTAG [719] Epichloe_clarkii_Hl TCTGTATCATTAACGCGCATCTATTAG [716] Epichloe_elymi_Evr TCTGTATCATTAACGTGCATCTTTTAG [722] Epichloe_elymi_Ec TCTGTATCATTAACGTGCATCTTTTAG [722] Epichloe_festucae_Frr TCTGTATCATTAACGTGCATCTATTAG [733] Epichloe_glyceriae_Gs1 TCTGTATCATTAACGTACATATACTAG [729] Epichloe_glyceriae_Gs2 TCTGTATCATTAACGTACATATACTAG [729] Epichloe_sylvatica_Bs1 TCTGTATCATTAACGCGCATCTATTAG [718] Epichloe_sylvatica_Bs2 TCTGTATCATTAACGCGCATCTATTAG [717] Epichloe_typhina_Lp1 TCTGTATCATTAACGCGCATCTATTAG [719] Epichloe_typhina_Bp1 TCTGTATCATTAACGCGCATCTATTAG [715] Epichloe_typhina_Dg1 TCTGTATCATTAACGCGCATCTATTAG [718] Epichloe_typhina_Ps1 TCTGTATCATTAACGCGCATCTATTAG [720] Epichloe_typhina_Pn1 TCTGTATCATTAACGCGCATCTATTAG [714] Epichloe_typhina_Pp1 TCTGTATCATTAACGCGCATCTATTAG [717] Neotyphodium_x_schardlii_Ca1 TCTGTATCATTAACGCGCATCTATTAG [715] Neotyphodium_x_schardlii_Ca2 TCTGTATCATTAACGCGCATCTATTAG [714] Epichloe_typhina_Pp2 TCTGTATCATTAACGCGCATCTATTAG [716] Epichloe_typhina_Pp3 TCTGTATCATTAACGCGCATCTATTAG [717] Epichloe_typhina_Pn2 TCTGTATCATTAACGCGCATCTATTAG [714] Epichloe_typhina_Pn3 TCTGTATCATTAACGCGCATCTATTAG [714] Epichloe_typhina_Ps2 TCTGTATCATTAACGCGCATCTATTAG [720] Epichloe_typhina_Pp4 TCTGTATCATTAACGCGCATCTATTAG [718] Epichloe_typhina_Pp5 TCTGTATCATTAACGCGCATCTATTAG [720] Epichloe_typhina_Dg2 TCTGTATCATTAACGCGCATCTATTAG [718] Epichloe_typhina_Bp2 TCTGTATCATTAACGCGCATCTATTAG [692] Epichloe_typhina_Bp3 TCTGTATCATTAACGCGCATCTATTAG [715] Epichloe_typhina_Ao TCTGTATCATTAACGCGCATCTATTAG [718] Epichloe_typhina_Lp2 TCTGTATCATTAACGCGCATCTATTAG [719] Epichloe_typhina_Lp3 TCTGTATCATTAACGCGCATCTATTAG [719] ; END; BEGIN CODONS; CODONPOSSET * CodonPositions = N: 1-777; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; END; BEGIN MacClade; Version 4.0 87; LastModified -940355391; FileSettings editor '0' '0' '1' '1'; Singles 100; Editor 00011001111111100100010010 '1' '24' Geneva '9' '164' '1' all; EditorPosition '50' '3' '883' '1219'; TreeWindowPosition '46' '6' '907' '1230'; ListWindow Characters closed Geneva '9' 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