NEXUS
[File created by TreeBASE:  7/26/07  21:03:01]
[Matrix accession#: M1566]

BEGIN TAXA;
	TITLE M1566;
	DIMENSIONS  NTAX=37;
	TAXLABELS
		Lophodermium_sp_5	Lophodermium_sp_4	Lophodermium_sp_3	Lophodermium_sp_2	Lophodermium_sp_1	Lophodermium_seditiosum_7	Lophodermium_seditiosum_6	Lophodermium_seditiosum_5	Lophodermium_seditiosum_4	Lophodermium_seditiosum_3	Lophodermium_seditiosum_2	Lophodermium_seditiosum_1	Lophodermium_pinastri_Sweden_24	Lophodermium_pinastri_Sweden_21	Lophodermium_pinastri_Scotla	Lophodermium_pinastri_Oregon	Lophodermium_pinastri_NZ	Lophodermium_pinastri_German	Lophodermium_pinastri_Canada	Lophodermium_picea	Lophodermium_nitens_38	Lophodermium_nitens_37	Lophodermium_molitoris_NZ	Lophodermium_molitoris	Lophodermium_indianum_14	Lophodermium_indianum_13	Lophodermium_conigenum_NZ_11	Lophodermium_conigenum_NZ_10	Lophodermium_baculiferum_Ore_28	Lophodermium_baculiferum_Ore_27	Lophodermium_baculiferum_Ore_26	Lophodermium_baculiferum_Mex_30	Lophodermium_baculiferum_Mex_29	Lophodermium_australe_Mexico	Lophodermium_australe_Florida	Leptostroma_sp	Elytroderma_deformans
	;
END;

BEGIN CHARACTERS;
	TITLE M1566;
	DIMENSIONS NCHAR=561;
	FORMAT DATATYPE = DNA MISSING = ? GAP = -  ;
	MATRIX
		Lophodermium_sp_5                     TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAATAAC-AGGGTCTTCGGGCCCC-TATTCTCACCCTT-TGTATACCTAA--CTTTGTTGCTTTGGCGGA-----AACGTCAA----------------GGGACCTAAACCCTCGAATCTCTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGTTCGCCTC-------C--GGGCTTACCTCAAAATCAGT-GGCGGC-CTCGTCTGA-CCTCAAGCGTAGTAATACTCGTCGCTTGGAGAATCAGGC-G-GGTGCTTGCTAT--C-AACCCCCA--CCATACTAGG-TTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_sp_4                     TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAATA-C-ATGGCCTTCGGGTCC--TATTCTCACCCTT-TGTCTACCAAAACTCTTGTTGCCTTGGCGCAT-TCGTGCGCCAA----------------AGGAATCAAACCCTTGAATCTCTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCTGGTATTCCGGGAGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCTCGCCTG-------CTCTGGCCTGCCTCAAAATCAGT-GGCGGC-ACAGTCCGATCCTCAAGCGCAGTAATACACGACGCTTGCCGGTGAAGAT-T-GCTGCT--CCAG--AAACCCCCCA--CAAACTAAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_sp_3                     TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAAGGAT----GCCTTCGGGCT-C-ACTTCTCACCCTT-TGTTTACCACA--CCTAGTTGCCTTGGCGCA---CAG-CGCCAGT------------G----GATCGAAACCCATGAATCATTGCTGTCTGAGTACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCCCGCCCCGGC-TACCCGGGGCTCGCTTCAAAATCAGT-GGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATGCTCGTCGCTGTTAGGGAAGGGCAGCAAGTGCCGTCATGTACAACCCCCACACACACA--AGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_sp_2                     TCCGTAGGTGAACCTGCGG-AAGGATCATTACAGAAGAACACAAGCCTTCGGGCTCA-TCTTCTCACCCTT-TGTTTACCACA--CTTAGTTGCCTTGGCGCA---TCG-CGCCAGT------------G----GATCGAAACTCGTGAATCATTGCCGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCCGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCCCGCCCCGCT-TACCCGGGGCTCGCTTCAAAATCAGT-GGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATGCTCGTCGCTGGTAGGGAAGGGCAGCAAGGGCCGTCAT--CCAACCCCCACACACACA--AGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_sp_1                     TCCGTAGGTGAACCTGCGG-AAGGATCATTACAGAAGAACACACGCCTTCGGGCTCG-TCTTCTCACCCTT-TGTTTACCACA--CTTAGTTGCCTTGGCGCA---CCG-CGCCAGT------------G----GATCGAAACTCCTGAATCATTGCCGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCCGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCCCGCCCCGCT-TACCCGGGGCTCGCTTCAAAATCAGT-GGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATGCTCGTCGCTGGTAGGGAAGGGCAGCAAGGGCCGTCAT--CCAACCCCCACACACACACAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_seditiosum_7             TCCGTAGGTGAACCTGCGG-AAGGATCATTATAGAAT-ACACGCGCCG-CGAGGTGC-TATTCTCACCCTT-TGTTTACCACA--CTCAGTTGCCTTGGCGCA---CAG-CGCCAGC------------G----GATTGAAACTCCTGAATCATTGCTGTCTGAGTACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGGGCTCGCCTTCGT--CACGAAGGCTTGCCTCAAAATCAGT-GGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATGCTCGTCGCTGGTAGGGAAGGACAGCAGGTGCCGTCAG-CACAACCCCCACACACA----AGGTTGACCTCGGATCAGGTAGGA-TACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_seditiosum_6             TCCGTAGGTGAACCTGCGG-AAGGATCATTATAGAAT-ACACGCGCCG-CGAGGTGC-TATTCTCACCCTT-TGTTTACCACA--CTCAGTTGCCTTGGCGCA---CAG-CGCCAGC------------G----GATTGAAACTCCTGAATCATTGCTGTCTGAGTACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGGGCTCGCCTTCGT--CACGAAGGCCTGCCTCAAAATCAGT-GGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATGCTCGTCGCTGGTAGGGAAGGACAGCAGGTGCCGTCAG-CACAACCCCCACATACA----AGGTTGACCTCGGATCAGGTAGGA-TACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_seditiosum_5             TCCGTAGGTGAACCTGCGG-AAGGATCATTATAGAAT-ACACGCGCCG-CGAGGTGC-TATTCTCACCCTT-TGTTTACCACA--CTCAGTTGCCTTGGCGCA---CAG-CGCCAGC------------G----GATTGAAACTCCTGAATCATTGCTGTCTGAGTACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGGGCTCGCCTTCGT--CACGAAGGCCTGCCTCAAAATCAGT-GGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATGCTCGTCGCTGGTAGGGAAGGACAGCAGGTGCCGTCAG-CACAACCCCCACATACA----AGGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_seditiosum_4             TCCGTAGGTGAACCTGCGG-AAGGATCATTATAGAAT-ACACGCGCCG-CGAGGTGC-TATTCTCACCCTT-TGTTTACCACA--CTCAGTTGCCTTGGCGCA---CAG-CGCCAGC------------G----GATTGAAACTCCTGAATCATTGCTGTCTGAGTACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGGGCTCGCCTTCGT--CACGAAGGCCTGCCTCAAAATCAGT-GGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATGCTCGTCGCTGGTAGGGAAGGACAGCAGGTGCCGTCAG-CACAACCCCCACACACA----AGGTTGACCTCGGATCAGGTAGGA-TACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_seditiosum_3             TCCGTAGGTGAACCTGCGG-AAGGATCATTATAGAAT-ACACGCGCCG-CGAGGTGC-TATTCTCACCCTT-TGTTTACCACA--CTCAGTTGCCTTGGCGCA---CAG-CGCCAGC------------G----GATTGAAACTCCTGAATCATTGCTGTCTGAGTACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGGGCTCGCCTTCGT--CACGAAGGCCTGCCTCAAAATCAGT-GGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATGCTCGTCGCTGGTAGGGAAGGACAGCAGGTGCCGTCAG-CACAACCCCCACACACA----AGGTTGACCTCGGATCAGGTAGGA-TACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_seditiosum_2             TCCGTAGGTGAACCTGCGG-AAGGATCATTATAGAAT-ACACGCGCCG-CGAGGTGC-TATTCTCACCCTT-TGTTTACCACA--CTCAGTTGCCTTGGCGCA---CAG-CGCCAGC------------G----GATTGAAACTCCTGAATCATTGCTGTCTGAGTACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGGGCTCGCCTTCGT--CACGAAGGCCTGCCTCAAAATCAGT-GGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATGCTCGTCGCTGGTAGGGAAGGACAGCAGGTGCCGTCAG-CACAACCCCCACACACA----AGGTTGACCTCGGATCAGGTAGGA-TACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_seditiosum_1             TCCGTAGGTGAACCTGCGG-AAGGATCATTATAGAAT-ACACGCGCCG-CGAGGTGC-TATTCTCACCCTT-TGTTTACCACA--CTCAGTTGCCTTGGCGCA---CAG-CGCCAGC------------G----GATTGAAACTCCTGAATCATTGCTGTCTGAGTACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGGGCTCGCCTTCGT--CACGAAGGCCTGCCTCAAAATCAGT-GGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATGCTCGTCGCTGGTAGGGAAGGACAGCAGGTGCCGTCAG-CACAACCCCCACACACA----AGGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_pinastri_Sweden_24       TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAAT-AAAGGGGCCTCCGGGCCCCCTATTCTCACCCTT-TGCCTACCATA--CATTGTTGCCTTGGCGCC---TCG-CGCCAGT------------G----GACAGAAACCCTTGAATCATTGCCGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCCGCTTGGTGTTGGGCTCGCCCT-------CTAGGGCTTGCCTCAAAATCAGT-GGCGGCCACAGCCCGA-CCTCTAGCGCAGTACTACTCGTCGCT-GGAAGGAGAGGC--CTAG--GCGCTAT-GACAACCCCCTTTTTTACA--AGGTTGACCTCGGATCAGGTAGGA-TACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_pinastri_Sweden_21       TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAAT-AAACGGGCCTCCGGGCCCCCTATTCTCACCCTT-TGCCTACCATA--CATTGTTGCCTTGGCGCT---TTG-CGCCAGT------------G----GACAGAAACCCTTGAATCATTGCCGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCCGCTTGGTGTTGGGCTCGCCCT-------CTAGGGCTTGCCTCAAAATCAGT-GGCGGCCACAGCCCGA-CCTCTAGCGCAGTACTACTCGTCGCT-GGAAGGAGAGGC--CTAG--GCGCTAT-GACAACCCCCTTTTTTACA--AGGTTGACCTCGGATCAGGTAGGA-TACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_pinastri_Scotla          TCCGTAGGTGAACCTGCGGGAAGGATCATTAAAGAAT-AAACGGGCCTCCGGGCCCCCTATTCTCACCCTT-TGCCTACCATA--CATTGTTGCCTTGGCGCT---TTG-CGCCAGT------------G----GACAGAAACCCTTGAATCATTGCCGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTTCGAGCGTCATTACAACCCTCAAGCTCCGCTTGGTGTTGGGCTCGCCCT-------CTAGGGCTTGCCTCAAAATCAGTTGGCGGCCACAGCCCGA-CCTCTAGCGCAGTACTACTCGTCGCT-GGAAGGAGAGGC--CTAG--GCGCTATAGACAACCCCCTTTTTTACA--AGGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_pinastri_Oregon          TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAAT-AACCGGGCCTTCGGGCCCC-TATTCTCACCCTT-TGTCTACCACA--CTTTGTTGCCTTGGCGCT---TCGGCGCCAGT------------G----GAACGAAACCCTGGAATCATTGCTGTCTGAATACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCTCGCCCT-------GTAGGGCCTGCCTCAAAATCAGT-GGCGGCCACCGTCCGA-CCTTCAGCGCAGTAATGCTCGTCGCTGTAAGGGAGGGCC--GAAG--CCGTCAT-GACAACCCCCACTTT-ACA--AGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_pinastri_NZ              TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAAT-AACCGGGCCTTCGGGCCCCCTATTCTCACCCTT-TGTCTACCACA--CTTTGTTGCCTTGGCGCT---GCGGCGCCAGT------------G----GAACGAAACCCTGGAATCATTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCTCGCCCT-------GTAGGGCCTGCCTCAAAATCAGT-GGCGGCCACCGTCCGA-CCTTCAGCGCAGTAATGCTCGTCGCTGTAAGGGAGGGCC--GCAG--CCGTCAT-GACAACCCCCACTTT-ACA--AGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_pinastri_German          TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAAT-AAACGGGCCTCCGGGCCCCCTATTCTCACCCTT-TGCCTACCATA--CATTGTTGCCTTGGCGCC---TCG-CGCCAGT------------G----GACAGAAACCCTTGAATCATTGCCGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCCGCTTGGTGTTGGGCTCGCCCT-------CTAGGGCTTGCCTCAAAATCAGT-GGCGGCCACAGCCCGA-CCTCTAGCGCAGTACTACTCGTCGCT-GGAAGGAGAGGC--CTAG--GCGCTAT-GACAACCCCCTTTTT-ACA--AGGTTGACCTCGGATCAGGTAGGA-TACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_pinastri_Canada          TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAAT-AAACGGGCCTCCGGGCCCCCTATTCTCACCCTT-TGCCTACCATA--CATTGTTGCCTTGGCGCT---TTG-CGCCAGT------------G----GACAGAAACCCTTGAATCATTGCCGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCCGCTTGGTGTTGGGCTCGCCCT-------CTAGGGCTTGCCTCAAAATCAGT-GGCGGCCACAGCCCGA-CCTCTAGCGCAGTACTACTCGTCGCTTGGAAGGAAAGGC--CTAA--GCGCTTT-GACAACCCCCTTTTTTACA--AGGGTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_picea                    TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAATT---TACGTCTTCGGACGC--TATTCTCACCCTT-TGTATA-TTAA--CTTTGTTGCTTTGGCAGGCCTCCGGCTTCGGCTGGGTCGTGTCTGCCAGAGGCCTAACTCTTGAATCACTGCGGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAATTAATGTGAATTGCAGAACTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGGGCTCGCCCT-------GTAGGGCCTGCCTCAAAGTCAGT-GGCGGC-ACCGTCTGA-CCCTAAGCGTAGTAATACTCGCCGCTTGTGGACTCAG-C-GCGTGGCCTGCCAG--CCAACCCCCA--CCAT-CAAGG-TTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_nitens_38                TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAATA-C-ATGGCCTTCGGGTCC--TATTCTCACCCTT-TGCCTACCAAAACTCTTGTTGCCTTGGCGCAT-TCGTGCGCCAA----------------AGGAATCAAACCCTTGAATCTCTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCTGGTATTCCGGGAGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCTCGCCTC-------CTTTGGCCTGCCTCAAAATCAGT-GGCGGC-ACAGTCCGATCCTCAAGCGCAGTAATACACGACGCTTGCTGGTGAAGGT-T-GCTGCT--CCAG--AAACCCCCCA--CAAACTAAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_nitens_37                TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAATA-C-ATGGCCTTCGGGTCC--TATTCTCACCCTT-TGTTTACCAAAACTCTTGTTGCCTTGGCGCAT-TCGTGCGCCAA----------------AGGAATCAAACCCTTGAATCTCTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCTGGTATTCCGGGAGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCTCGCCTC-------CTTTGGCCTGCCTCAAAATCAGT-GGCGGC-ACAGTCCGATCCTCAAGCGCAGTAATACACGACGCTTGCCGGTGAAGGT-T-GCTGCT--CCAG--AAACCCCCCA--CAAACTAAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_molitoris_NZ             TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAATAAC-AGGGTCTTCGGGCCCC-TATTCACACCCTAGTGTTTACCTAA--CTTTGTTGCTTTGGCGGA-----AACGTCAG----------------AGGACCTAAACCCTAGAATCTCTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGTTCGCCTC-------C--GGGCTTACCTCAAAATCAGT-GGCGGC-CTCGTCTGA-CCTCAAGCGTAGTAATACTCGTCGCTTGGAGAATCAGTC-G-AAAGCCTGCTAG--A-AACCCCCACACTATACTAGG-TTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_molitoris                TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAATAAC-AGGGTCTTCGGGCCCC-TATTCACACCCTTATGTCTACCTAA--CTTTGTTGCTTTGGCGGA-----GACGTCAG----------------AGGACCTAAACTCTAGAATCTCTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGTTCGCCTC-------C--GGGCTTACCTCAAAATCAGT-GGCGGC-CTCGGCTGA-CATCAAGCGTAGTAATACTCGTCGCTTGGAGAATCAGTC-GTAAAGCCTGCTAG--C-AACCCCCACACTATACTAGG-TTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_indianum_14              TCCGTAGGTGAACCTGCGG-AAGGATCATTACAGAAGAAAGCACGCCTTCGGGCTCC-TCTTCTCACCCTT-TGTTTACCACA--CTTAGTTGCCTTGGCGCA---TCG-CGCCAGT------------G----GATCAAAACTCGTGAATCATTGCCGTCTGAGTACTATACAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCCGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCCCGCCCCGCT-TACCCGGGGCTCGCTTCAAAATCAGT-GGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATGCTCGTCGCTGGTAGGGAAGGGCAGCAAGGGCCGTCAT--CCAACCCCCACACACA----AGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_indianum_13              TCCGTAGGTGAACCTGCGG-AAGGATCATTACAGAAGAAAGCACGCCTTCGGGCTCC-TCTTCTCACCCTT-TGTTTACCACA--CTTAGTTGCCTTGGCGCA---CCG-CGCCAGT------------G----GATCGAAACTCGTGAATCATTGCCGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCCGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCCCGCCCCGCT-TACCCGGGGCTCGCTTCAAAATCAGT-GGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATGCTCGTCGCTGGTAGGGAAGGGCAGCAAGGGCCGTCAT--CCAACCCCCACACACACACAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_conigenum_NZ_11          TCCGTAGGTGAACCTGCGG-AAGGATCATTACAGAAGGATAT-CGCCCTCGGGCTTC-TCTTCTCACCCTT-TGTTTACCACA--CGTAGTTGCCTTGGCGCT---CCG-CGCCAGT------------G----GATCGAAACTCCTGAATCATTGCCGTCTGAGTACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCCGGCATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCCCGCCCCGGCCTGCCCGGGGCTCGCTTCAAAGTCAGT-GGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATGCTCGCCGCTGTTAGGGAAGGGCAGCAAGGGCCGTCAT--ACAACCCCCACACACA----AGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_conigenum_NZ_10          TCCGTAGGTGAACCTGCGG-AAGGATCATTACAGAAGGATAT-CGCCCTCGGGCTTC-TCTTCTCACCCTT-TGTTTACCACA--CGTAGTTGCCTTGGCGCT---CCG-CGCCAGT------------G----GATCGAAACTCCTGAATCATTGCCGTCTGAGTACTATTCAATAGTTAAAACTTTCAACAACCGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCCGGCATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCCCGCCCCGGCCTGCCCGGGGCTCGCTTCAAAGTCAGT-GGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATGCTCGCCGCTGTTAGGGAAGGGCAGCAAGGGCCGTCAT--ACAACCCCCACACACA----AGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_baculiferum_Ore_28       TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAATA-C-ACGGCCTCACGGCCC--TATTCTCACCCTT-TGTATACTTAA--CTTTGTTGCTTTGGCGGA-----AACGTCAG----------------AGGACCGAAACCCTTGAATCTCTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCTCGCCTC-------C--GGGCTTGCCTCAAAGTCAGT-GGCGGC-ACCGTCTGA-CCTTAAGCGCAGTAATACTCGCCGCTTGTAGAATCAGGA-GGATAGCTTGCTAA--G-AACCCCCA--TCATACAAAG-TTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_baculiferum_Ore_27       TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAATA-C-ACGGCCTCACGGCCC--TATTCTCACCCTT-TGTATACTTAA--CTTTGTTGCTTTGGCGGA-----AACGTCAG----------------AGGACCGAAACCCTTGAATCTCTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCTCGCCTC-------C--GGGCTTGCCTCAAAGTCAGT-GGCGGC-ACCGTCTGA-CCTTAAGCGCAGTAATACTCGCCGCTTGTAGAATCAGGA-GGATAGCTTGCTAA--G-AACCCCCA--TCATACAAAG-TTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_baculiferum_Ore_26       TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAATA-C-ACGGCCTCACGGCCC--TATTCTCACCCTT-TGTATACTTAA--CTTTGTTGCTTTGGCGGA-----AACGTCAG----------------AGGACCGAAACCCTTGAATCTCTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCTCGCCTC-------C--GGGCTTGCCTCAAAGTCAGT-GGCGGC-ACCGTCTGA-CCTTAAGCGCAGTAATACTCGCCGCTTGTAGAATCAGGA-GGATAGCTTGCTAA--G-AACCCCCA--TCATACAAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_baculiferum_Mex_30       TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAATAAC-AAGGCCTCCGGGCCC--TATTCTCACCCTT-TGTATACTTAA--CTTTGTTGCTTTGGCGGA-----AACGTCAG----------------AGGACCGAAACCCTTGAATCTCTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCACCGTCTGGTATTCCGGACGGTATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCTCGCCTC-------C--GGGCTTGCCTCAAAGTCAGT-GGCGGC-ACCGTCTGA-CCTTAAGCGCAGTAATTACCGCCGCTTGTAGGACCAGAG-GGATGGCTCGCTAA--G-AACCCCCA--CTTTACAATGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_baculiferum_Mex_29       TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAATAAC-AAGGCCTCCGGGCCC--TATTCTCACCCTT-TGTATACTTAA--CTTTGTTGCTTTGGCGGA-----AACGTCAG----------------AGGACCGAAACCCTTGAATCTCTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCACCGTCTGGTATTCCGGACGGTATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCTCGCCTC-------C--GGGCTTGCCTCAAAGTCAGT-GGCGGC-ACCGTCTGA-CCTTAAGCGCAGTAATTACCGCCGCTTGTAGGACCAGAG-GGATGGCTCGCTAA--G-AACCCCCA--CTTTACAAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_australe_Mexico          TCCGTAGGTGAACCTGCGG-AAGGATCATTACAGAAGGATAT-CGCCCTCGGGCTTC-TCTTCTCACCCTT-TGTTTACCACA--CGTAGTTGCCTTGGCGCT---CCG-CGCCAGT------------G----GATCGAAACTCCTGAATCATTGCCGTCTGAGTACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCCGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCCCGCCCCGGCCTGCCCGGGGCTCGCTTCAAAGTCAGT-GGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATGCTCGCCGCTGTTAGGGAAGGGTAGCAAGGGCCGTCAT--ACAACCCCCACACACA----AGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Lophodermium_australe_Florida         TCCGTAGGTGAACCTGCGG-AAGGATCATTACAGAAGGATAT-CGCCCTCGGGCTTC-TCTTCTCACCCTT-TGTTTACCACA--CGTAGTTGCCTTGGCGCT---CCG-CGCCAGT------------G----GATCGAAACTCCTGAATCATTGCCGTCTGAGTACTATTCAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCCGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTGTTGAGCCCGCCCCGGCCTGCCCGGGGCTCGCTTCAAAGTCAGT-GGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATGCTCGTCGCTGTTAGGGAAGGGTAGCAAGGGCCGTCAT--ACAACCCCCACACACA----AGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Leptostroma_sp                        TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAATA-C-ATGGCCTTCGGGTCC--TATTCTCACCCTT-TGTCTACCAAAACTCTTGTTGCCTTGGCGCAT-TCGTGCGCCAA----------------AGGAATCAAACCCTTGAATCTCTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTCCTGGTATTCCGGGAGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCTCGCCTG-------CTCTGGCCTGCCTCAAAATCAGT-GGCGGC-ACAGTCCGATCCTCAAGCGCAGTAATACACGACGCTTGCCGGTGAAGAT-T-GCTGCT--CCAG--AAACCCCCCA--CAAACTAAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
		Elytroderma_deformans                 TCCGTAGGTGAACCTGCGG-AAGGATCATTAAAGAAT--TACGGGCTTTCGGGCCTC-TATTCTCACCCTT-TGTTTACCACA--CTTTGTTGCCTTGGCGCC---TAG-CGCCAGC------------G----GATCAAAACCCTTGAATCATTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCAAGCTCAGCTTGGTGTTGGGCTCGCCCCGCT-TACCCGGGGCTTGCCTCAAAATCAGT-AGCGGCCGCCGTCCGA-CCTTCAGCGCAGTAATACTCGTCGCTCGGAGGGAAAGACGGTA----TCGTTAACCCGAACCCCCACACA------AGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 561 ; 
 CODESET * UNTITLED = Universal.ext: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;