NEXUS [File created by TreeBASE: 7/26/07 21:03:14] [Matrix accession#: M1598] BEGIN TAXA; TITLE M1598; DIMENSIONS NTAX=36; TAXLABELS Kohleria_eriantha_Gcyc1 Loxostigma_sp._Gcyc1C Loxostigma_sp._Gcyc1D Mitraria_coccinea_Gcyc1E Napeanthus_reitzii_Gcyc1 Nicotiana_tabacum_cyc1 Nicotiana_tabacum_cyc2 Paulownia_tomentosa_Pcyc1 Paulownia_tomentosa_Pcyc2 Ramonda_myconi_Gcyc1 Ramonda_myconi_Gcyc2 Schizanthus_x_wisetonensis_cyc1 Schizanthus_x_wisetonensis_cyc2 Scrophularia_canina_Scyc1 Scrophularia_canina_Scyc2 Sinningia_schiffneri_Gcyc1 Streptocarpus_holstii_Gcyc1A Streptocarpus_holstii_Gcyc1B Tetranema__mexicanum_Tcyc2 Titanotrichum_oldhamii_Gcyc1 Antirrhinum_majus_cyc Antirrhinum_majus_dich Besleria_labiosa_Gcyc1 Calceolaria_arachnoidea_Ccyc1 Calceolaria_arachnoidea_Ccyc2 Chrysothemis_pulchella_Gcyc1 Cyrtandra_apiculata_Gcyc1 Cyrtandra_apiculata_Gcyc2 Didymocarpus_citrinus_Gcyc1C Didymocarpus_citrinus_Gcyc1D Epithema_benthamii_Gcyc1 Epithema_benthamii_Gcyc2 Fieldia_australis_Gcyc1E Fieldia_australis_Gcyc1F Gesneria_humilis_Gcyc1 Jovellana_punctata_Ccyc2 ; END; BEGIN CHARACTERS; TITLE M1598; DIMENSIONS NCHAR=1020; FORMAT DATATYPE = DNA MISSING = ? GAP = - ; MATRIX Kohleria_eriantha_Gcyc1 atgctaGGTTTCGACAAGCCAAGTAAAACCCTTGACTGGTTGCTCACTAAATCTAAAGCAGCCATTAAGGAGCTG---------GTGCAGGCTAAG---AAAAGT------------GGGAGTGGTAGTGCT---AAGAGC------------ATTTCTTCCCCTTCT------GAATGT------GAGGTAGTGTCTGCAGGA---ACT---GGTGAAACT---TTCGAAAATGGCAGCTATTTG------GATGCGGATTCAAAGAAGAAA---TCACTGCCCCTGAATTCT---------------------AATTACAACTGTAAAGAATATTCAAAAGATCCACAGCAGTCTGCATTAAATCTTGCTAAAGTATCAAGGGCCAAGGCAAGAGCAAGGGCCAGAGAAAGAACAAGAGAGAAAATGAGCATCAAGAAGCTTAATGAATCA---AGAAAC---ATGAAC---CCTGAT---TTG---AACCCTTCAAACCAA---ATTCAG---------------------------------------------------------------------------------------------------CCTACCCTCCACTGTCCCTTA---ACTAATAGTGTA------------CCTGCTGCAACAAAT---GAAGATTTAATTCAA---GAATCCATTGTCATTAAAAGGATGTTGAAA---------CAGTACCCG---TCATTTTTTGGATTT---CAACAAAACCTT---ATCATTTCAAGGGATTTG------AACTGCAAT---CTCCCTTCACCT------------------------------------------------AATATCAACTATAATTGGGAT---GTCAATAGCTTAACT---------------------------------------------------TCACAGTCCAAC---CTGTGTGACATTTTG------GATCAGCACAAATTCATA Loxostigma_sp._Gcyc1C ATGCTAGGTTTCGACAAGCCAAGTAAAACACTTGAGTGGTTGTTAACGAAATCGAAAGCAGCCATTAAAGATCTG---------GTTCATACAAAG---AAGAGT------------------TCTAGTTCT---AGGAGC------------ACTTCTTCGCCTTCT------GAATGC------GAAGTAGTGTTA---------AAT---CGTGAAGCT---TTTGAATTTGGGAGTTGTTTATTA---CCTGCGGATTCGAAGAGAAAA---TCAGTGTTGATGAATGCT------------------------AACAAATGTAAAGGA---GCTAAAGATCCAACACAGAGTGCATCAACTCTGGCTAAAGAATCAAGGGCTAAGGCAAGAGCAAGGGCAAGGGAAAGAACGAAGGAAAAAATGGGCATCAAGAAGCTAAATGAATCA---AGAAAC---ATG------------------------------------------------------AAC---AATTTGTTTGAAGTTTGCAGA---CCATCTGCATCTAAT---------------------------------------ATCCAGCCTATTCTTCATTGTCCCATT---ACCAAT---GAAGCTACTGCTGACACAGTAGTAGCAACT---AAACACCTAATTCAA---GAATCCAATGTCGTTAAAAGGATGCTGAGG---------CACCACCCT---TCGTTTTTCGGGTTT------------------------------------------CATTGCAGT---CTCCCATCAACT------------------------------------------------AATGTCAATGATAATTGGGAT---GTCAGCAGTTTAACC---------------------------------------------------TCACAATCCAAC---TTTTGTGACATTTTG------GATCAGCACAAATTCATA Loxostigma_sp._Gcyc1D ATGCTAGGTTTCGACAAGCCAAGTAAAACACTTGAGTGGTTGTTAACGAAATCGAAAGTAGCCATTAAAGATCTG---------GTTCACACAAAG---AAAAGT------------------TCTAGTGCT---AGGAGC------------ACTTCTTCCCCTTCT------GAATGC------GAAGTAGTGTTA---------AAT---GATGAGGCT---TTTGAAAATGGGAGTTATTTATTA---GGTGCAGATTCGAAGAGAAAA---TGGGTATCGATGAATGCT------------------------AACAAATGTAAAGGA---GCTAAAGATCCAACTCAGAGTGCATCAACTCTAGCTAAAGAATCAAGGGCTAAGGCAAGAGCAAGGGCTAGGGAAAGAACCAAGGAGAAAATGTGCATCAAGAAGCTAAATGAATCA---AGAAAC---ATGGGT---TCTAAT---TTA---AATCCTTCAGTCCCA---ATTCAG------AGGAAC---AATTTGTTTGAAGTTTGCAGA---CCATCTGCATCTAAT---------------------------------------------AGTTTTCTTCATTGTTCCATA---ACTAAT---GAAGCAACTGCTGCTACAGTAGCAGCAACTCATGAAGACCTAATTCAA---GAATCCAATGTCATTAAAAGGATGCTGAGG---------CACCACTCT---TCGTTTTTCGGGTTA------------------------------------------TATTGCAGT---CTCCCATCTCCT------------------------------------------------AATGTCAATGAGAATTGGGAT---GCTAGCAGCTTAACC---------------------------------------------------TCACAATCCAAC---TTTTGTGACATTTTG------GATCAGCACAAATTCATA Mitraria_coccinea_Gcyc1E ATGCTAGGTTTCGACAAGCCAAGTAAAACCCTTGAGTGGCTGCTCACGAAATCGAAAGCAGCCATTAAGGAGCTG---------GTGCAGACGAAG---AAAAGT------------GCCAGTGCTAGTGCT---AAGAGC------------ATTTCTTCCCCTTCT------GAATGC------GAGGTCGTGTCTGCAGGA---AAT---GGTGAAGCT---TTCGAAAATGGGAACTATTTA------GGTGCAGATTCAAACAGGAAA---TCGGTACTGCTGAATGCT------------------------TACAAATGTAAAGAA---GCAAAAGATCCACAGCAGCCTGCATTAAATCTTGCTAAAGTATCAAGGGCTAAAGCAAGAGCAAGGGCTAGAGAAGGAACAAGAGAGAAAATGTGCATCAAGAAGCTTAACGAATCA---AGATAC---ATGGAT---CCTGAT---TCG---AACCCCTCAAACCCA---ATTCAGTCC---AGAAAC---AATCTAATCGAAATTTGCAAATCA---TCTGCTTCTAAT---------------------------------------AGCGAGCCTATCCTCCATTGTCCCTTA---ACTAAT---GTA------------GCTGCTGCATCAACT---GAAGACCTAATTCAA---GAATCCATTGTCATCAAAAGGATGCTGAAG------------CACCCT---TCGTTTTTTGGATAT---CAACAAAACCTT---ATCATTTCAAGAGATTTG------AACTGCAGT---CTCCCATCTCCT------------------------------------------------AATATCAATGATAATTGGGAT---ATCAGTAGCTTAACC---------------------------------------------------TCACAATCCAAC---CTATGTGACATTTTG------GATCAGCACAAATTCATA Napeanthus_reitzii_Gcyc1 ATGCTAGGTTTTGACAAGCCAAGCAAAACCCTTGAATGGCTGCTCACGAAATCGAAAGCAGCCATTAAGGAGCTG---------GTGCACACAAAG---AAAAGT------------GCCAGTGCCAGTGCT---AAGAGC------------AATTCTTCCCCTTCT------GAATGC------GAGGTAGTGTCTGCAGGA---AAT---GGCGAAGCT---TTTGATTATGGAAACTATTTA------GGTGCAGATTCAAAGAAGAAA---TCAGCGCTTATGAATGCT------------------------TACAAATGTAAAGGA---CCAAAAGATCCACAGCAGGCTGCATTAAATCTTGCTAAAGAATCCAGGGCTAAAGCAAGAGCAAGGGCTAGAGAAAGAACAAGAGAAAAAATGAGCATCAAGAAGCTTAACGAATCA---ATAAAC---TTGGTC---CCTGAT---TTG---AACCCCTCAAACCCA---ATTCAGTCT---ACAAAC---AATCCATTTGAC------------------------------------------------------------------------------CTCCATTGTCCCTTA---ACTAAT---GTA------------GCTGCACCAGAAACT---GAAGACCTAATTCAA---GAATCCATAGTCATCAAAAGGATGTTGAAG------------CACCCT---TCATTTTTTGGTTTC---CAACAAAACCTT---ATCATTTCAAGAGATTTG------AACTGCAGC---CTCCCATCTGCT------------------------------------------------AATATCAATGAGAATTGGGAT---ATTAGTAGCATAACC---------------------------------------------------TCACAATCCAAC---CTATGCGACATTTTG------GATCAGCACAAATTCATA Nicotiana_tabacum_cyc1 ATGCTTGGTTTTGACAAACCAAGTAAAACCCTTGATTGGCTATTCACAAAGTCCAAATTAGCCATTGAAGAGCTGACTACT---GCTCAGATCAAA---ATCACCAGC---CCTAATGAGTCGTCAGCAGCAAAGAAAAGTACT---TCATCTATTAAT------------TCAGAATGTGAG---GACGTTGTTCTTGCA------------------------------------------------------------------------------------------------------------------AGAGCAAAACAAGAGGAG------------------GCTATACTTAATTTGGTTGCGAGAGAGTCAAGGGCAAAGGCTAGAGCAAGAGCTAGGGAAAGAACAATCAAGAAAATCTGGGCCCAAATT------GAAGCC---AAACTTAAC------------------------TCATCATCAGTAGTA---------------AAGGAGCAGACTAAGATTGAT------------------------------------------------------------GAAATT---------------------------------------------------------------------AAAGAAATG---ATTCAC---GGATCTGTACTTGTGGAAAGGAAGAATATC---------------------------------------------------------------AAGTCTTCTTCCTCAACTTGGGTTTTCATCACCCGAATCTCAGTGGTACTGAAGAGGCTACAGCTAATTCGAACTACAATAGCTCCTCTTCTACCCGAAATTGGGATC------------------ATGATG------------------------------------------------------------------------TTA---ATCGAACAA------------ Nicotiana_tabacum_cyc2 ATACTAGGTTTTGACAAACCAAGCAAAACGCTGGATTGGCTTTTCACTAACTCGAAACTAGCCATTGAGGAGCTCGCTAATTGGTCAACTCAT------CAGGATCATCACCCAAAG---ATTGCAGGAGCAACGAAGTCGAGCTGCAATGAGACCGCCAAGGATTGTGCTTCACAGTGTGAA---GACCTGGCCATAACA---------------------------ACAAAT---------------------GAGGGTTCGGAAAGAAAG------------------------------------------CCCAAAAGAGCAAAAGAA---AAGAAAGAAGTAAAAGATGATCTTGTCCTAGTTGCAAGAGAGTCAAGGGCGAAGGCAAGAGCAAGAGCTAGGGAAAGAACAATCAAGAAAATGTGGAGTAGAATT------GAAACTAGCCAGAGGTCA------ACTTCTCAG---TTG---ATCAGATCTAGTTTT------------------CACCCAAATTTC------------------------------------------------------------TCTGCTCCTATA------------------------------------------------------------------------------------------GAGTCA------------------------------------------------------------------------TCAACTACCTACTATGGTAGCTCTTCTTTCAAC---------------------------------------------------------------------------ACTGAGAATTTGGAC------AAAGGCACAACT---TCAGAA---CTTCAA------------GGTCGCTGG---------------------AAACAATTG---GACTCATGTCACAGCAACCAA------------ Paulownia_tomentosa_Pcyc1 ATGCTAGGTTTCGACAAGCCAAGCAAAACTCTTGATTGGCTGCTCACCAAATCAAAAACAGCCATTAAGCACCTG---------GTGCAGACGAAG---CAACAC------------ACCACTGCTGGTGCC---AAGAGT------------GTTTCTTCTCCTTCT------GAATGT------GAGGTAGAGTCTGAAGGA---AAT---GGGGAGGCT---TTTGAAAATGGGAAATCTTTA------GGGGCAGATTCAAAAGGAAAA---TCAGTTATGATGAAAGCT------------------------AACAAACATAAAGGA---GGAAAGGATCCACAGCAGGCCGCATTAAATCTTGCAAAAGAGTCGAGGGTAAAGGCAAGAGCAAGGGCTAGGGAAAGAACAAGAGAGAAATTGTGCATCAAGCAGCTCAATGAATCC---AGAAAC---ACGGGC---TATGAT---TTG---AACCCCTCCATCCCA---ATTCAGTAT---ATGAAC---AATCAACTTGAAGTTTGCAAAATA---TCAGGTTCTACTAGC------------------AAGGTGGATGCTGGAATT------------CTCCATTGTCCCCCA---ACTTAT---GAA------------------GCAGCAACTCATGAAGACCTAATTCAA---GAATCCATTGTGATCAAAAGGAAGGTGAAG------------CATCCC---TCAATCTTCGGATTT---CAGCCAAACCAT---ATCATTTCTAGAGATTCGAGTTCAAACTACAGT---ATCCCATCTCCTTAT---------------------------------------------AACTCCACTGAGAATTGGGAT---ATAAGTAACTTTACC---------------------------------------------------TCACAATCCAAC---ATATGTGCCATTTTG------GATCAGCACAAATTCATA Paulownia_tomentosa_Pcyc2 ATGCTAGGTTTCGACAAGCCAAGCAAAACTCTTGATTGGCTGCTTACGAAATCAAAAGCAGCCATTAAAGAGCTG---------GTGCAGACGAAA---CAAAAC------------GCCAGTGCTAGTGCT---AAGAGTAGT------------TCTTCATCCTCT------GAATGT------GAGTTACTCTCTTCTGTAGGAAAT---GGGGATGTT---TTTGAATATGGGAACTCTTTA------GGAGCAGGTTCAAAGAGGAAG---TTT---GGT---------------------------------AACAAACATAAAGGA---GCAAAGGATCCACAGCAGGCAGCATCAAATCTTGCCAAAGAGTCAAGGGCAAAGGCAAGAGCAAGGGCTAGGGAAAGAACAAGAGAGAAAATGTGCATCAAGCAGCTCAATGGAGCC---AGGAAC---ACGGGT---TCTGAT---TTG---AACCCCTCCATCCCA---ATGCAATAT---AGGAAC---AATCAACTTGAAGTTTTTCAGTTATCTGCGGGTTCTAGTAGCAACAACTTATCCTGCTTGAAGGCGAATGCTGGAATTCGTGAGCCTATCTTCCATTGTCCCCTA---ACTAAT---GAA------------------GCAGCTACT---GAAGACCTAATTCAA---GAATCTATTGTGATCAAACGGAAGTCGAAG------------AATCCA---TCATTTTTCGGGTTT---CAGCAAAACCTT---ATTGTTTCGAGAGATTTGAGTTCAAACTACGGT---ATCCCATCTGCT------------------------------------------------AATACCACTGAGAATTGGGAT---ATTTGTAGCTTCACC---------------------------------------------------TCACAATCCAAC---CTGTGCGCCATTTTG------GATCAGCACAAATTCATA Ramonda_myconi_Gcyc1 ATGCTAGGTTTCGACAAGCCAAGTAAAACCCTCGACTGGTTGTTAACCAAATCGAAAGTGGCCATCAAAGATCTG---------GTGCATACAAAG---AAAAGTTCTAGT------CCTAGTGCTAGTGCT---AGGGGC------------ATTTCTTCCCCTTCC------GAGTGC------GAAGTAGTGTTA---------AAT---GGTGAA---------------------------------------GATTCGAAGAAGAAA---------------------------------------------------AGTAAAGAA---GCAAAGGATCCAACGCAGATTGCATCAACACTAGCTAAAGAATCAAGGGCTAAGGCAAGAGCAAGGGCTAGGGAAAGAACAAAGGAGAAAATGTGCATCAAAAAGTTGAACGAATCA---GGGAAA---ATGGTT---TCTCAT---CTA---AGTCCTACAATC---------------------------------------------------------------------------------------------------------------CCAATT---CATTGCCCAATCATGACTGAT---GAA------------------GCAACTAAT------GACATGATTCAA---GAATCCAATCTCATTAAAAGGATGATGAGG---------CCGCACCCT---TCGATTTTCGGGTTT------------------------------------------CATCGC------------------------------------------------------------------GATGTCAATGAGAATTGGGAT---ATCAGCAGCTTAACA------------------------------------------------TCGTCACAATCCAAC---TTCTGTGACATTTTG------GATCAGCACAAATTCATA Ramonda_myconi_Gcyc2 ATGCTAGGTTTCGACAAGCCAAGTAAAACCCTTGAATGGCTTCTTACAAAATCGAAAGCAGCCATTAAGGAGCTT---------GTGCAGATGAAG---AAAAAT---------GACTCCACTACTTGCACTAATATGAGT---------GTTGTTTCTTCCCCTTCA------GACTGC------GAT---------------------------------------------GGGAACTACATA------GATCCGGATTCTAATGCA------------CCGGCCAATTATTTTGCT------------------TACGGTTGTGGAAGA---ACAAAAGATCCACAGCAGGATGTAATGAACCTTGCCAAAGAATCGAGGGCTAAGGCGAGGGCGAGGGCTAGGGAAAGAACTAGAGAGAAAATGTGCAAGAAGAAGCTTAATGATTCT---AGAAAC---ATGGCCTCTCCTTCTAGCCTC---AATTTTCCCTTAGCT---------------AATAAT---------------------------------------------------------------------------------------------------------------ACAGCT---GCT------------GCTGCTGCTGCAACT---GAAGAACTGATTCAT---GAATCTCTTGTCATCAGAAGGATGTTGAAG------CAAAACCAT------TCAAATTTCGGGTTT---CACCAAAAC---------------------------------------------------------------------------------------------------------TTAAATCAGAATTGGGAT---ATGAGCAACTTAACA---------------------------------------------------GCACAATCCGAA---CTATGTGACATTTTG------GATCAGCACAAATTCATA Schizanthus_x_wisetonensis_cyc1 ATGTTAGGTTTTGACAAACCAAGCAAAACGCTGGATTGGCTCTTCACAAACTCCAAACTAGCCATTGATGATCTC---------------------------------------------ATCACTCGCGCG---AAATCT---------GCTATTTCA---------------CAATGT---CATGAGGAAACCATT------------------------------AATGAAGCAAAC---------------CCTCCTGCCAAAACCAAA------ACAAGTAGTCATGAC---------------------------CACCAAAAACAGGAGGCTAAAACA------------CTTCATGTCCTCGCGAGAGAGTCGAGGGACAAGGCTAGAGCAAGAGCTAGGGAAAGAACAATCAACAAACTGTGGCCTCGA---CTTGTTGGTGGC---AAGAAA---------------------------TCTAACTCATCATTG---------------AAGGAGCATACACAGATGGAT---------------------------------------------------------AAACCAATTTGT------------------------------------------------------------------------------------------------------------------------------GTCAAACCCTCTTTAATCTTGGGTTTTCATGGCCAGAATCTCACTACTGCTCCAAAAGGGTCTATTTCAAACTACAGT---AACTGTTTTTCTAAT---------------------------------------------------ACCCAGAATTGGGAT---GTTAGTAACACTTTGATGAGCTCCAGTTTAAGTGCTGCAATGACTACCAGTGCTAATAATTACTCATCACAA---------GTATTTCAAAGTTGC------GATCAG------------ Schizanthus_x_wisetonensis_cyc2 ATGCTAGGTTTTGAAAAACCCAGCAAAACGCTGGATTGGCTCTTCACAAACTCCAAACTAGCCATTGAAGTTCTC---------------------------------------------TCTGCCAGG------AAAAACCCAGCTTCTTCTATTTCA---------------CAATGTGAGCAAAAGCCTCCTGTG---------------GATCAAATAGCC---AAATCA---------------------------------------------------AGTACTGGT------------------------AAAAAACAAAAACAG---GTCAAGACACATGATCAGGCTACAGTTCTT---GCAAGGGAGTCAAGGGCTAGGGCAAGAGCAAGAGCTAGAGAAAGAACAATCAACAAAATGTGGACCCGAATTGTTACTGGG------AAGAGATCA------------------------------------TTATCATGT------------CCCCAC------ATGGAT------------------------------------------------------ATACAACCACTTTGTGATTAC------------------------------------------------------------AAAAGAGCT---------TGTGATTCA---GCAATTAAAGAAATGATGATC------------AAACCCTGGGTCATTCTTGGGTTT---------------------TCACCCAAATCTCAGTCCTCCAATCATGGGTTTTTCTGCTGCTGCTAC---------------------------------------------ACTACTACT---------------------------------------------------------------------------------------------------------ACATTA------------------------ Scrophularia_canina_Scyc1 ATGCTAGGTTTCGACAAGCCAAGCAGGACTCTTGATTGGCTGCTAACGGAATCGAAACCCGCCATTAAGGAACTCGCT---------------------------------------GCTAGTGGTCGTGGTAATAAGAGTCGC---------ATTTCTTCCCCTTCTGAT---CAATGT------GAAGTGGTCTCAGTC---------------------------GAAAACGCCAGCTCA------GATTCGAAGAGCACTAAAGGGAAA---------------------------------------------------------------------GAGCCACGTCATCAGCTGGCAGATCTTGCTAAAGAGTCAAGGGCAAAGGCAAGGGCAAGGGCTAGCGAAAGAACAAGAGAGAAAATGTGTATCAAGCAGATTAATGGCGCT---ACAAAC---ACCACTCTTCATGAA------------------------------------------CACCAAATTCCATTTAGGGTT---------------AGTAGTAAT---------------------------------------------------------------------------------------------------AGTAGTACT---GGAAATCAT------CATGAG---------------GGGATGGTTAAT---------------------TCGATTTTCGAGTTT---CAGCAAAATCTC---TTTGTTTCTAGAGATTTCACTTCAAACCACAACATGAATCCTACTCAT---------------------------------------------------------GAAAATTGGGAT------------------------------------------------------------------------------------GTTTGTGCCATTTTG------GATCAGCACAAATTCATA Scrophularia_canina_Scyc2 ATGCTAGGTTTCGACAAGCCAAGCAAAACCCTCGATTGGCTACTTACGGAGTCAAAAGCCTCGATTAAAGACCTC---------ATCTTGAAGAAA---AAATCT---------------------------CAAAACGGTGTA------GTTTCATCTTCTCCTTTT------GAATGT------GAGGTAATTTCTTCTAGA---AAC---------------TTAGAA---------------------------CATTCAAACCGAAAA---TCGATATGTTTA------------------------------------------------------------------------------AGTGCTAAAGAGATGAGAGTCAAAGCAAGAGCAAGAGCTAGGGAAAGAACAAGAGAGAAAATGTGTATCAAACAGCTTAATGAAGCTATTAGAAGAAAT---GGA---TATGAT---TTG---AGCCCTTCAATTCCA---ATTCATTATAATATGAATAATAATAAC---------------------------------TGTAATAATGGT---------------------GGAATTTCGGAATCAATCTTCGATTATCCGATC---AATTAT---GAA---------------GCATCATCAAATCATGAAGACCTAATT---CATGAATCCATTTTAATAAGGAGGAAATTTAAG---------CAATATCCTCCATCAATTTTCGGGTTT---CAACACAACCTT---ATATTTTCTCGGGATTCAAGTTCGAAC------------GCTACTCCA------------------------------------------------TTTACTACACAATCC---GAC------------------------------------------------------------------------------------GTTTGGGCCATTTTG------GATCAGCACAAATTCATA Sinningia_schiffneri_Gcyc1 ATGCTAGGTTTCGACAAGCCAAGTAAAACCTTAGACTGGTTGTTAATTAAATCGAAAGCAGCCATTAAGGAGCTG---------GTGCAGGCTAAG---AAAAGT------------GGGAGT------GCT---AAGAGC------------ATTTCTTCCCCTTCT------GAATGC------GAGGTAGTGTTTGCAGGA---AAT---GGTGAAACT---TTTGAAAATGGCAGCTATTTG------GATGCGGAATCAAAGAAGAAA---TCCATGCCCCTGAATCCT---------------------AATTACAAGTGTAAAGAATATTCAAAAGATCCACAGCAGTCTGCATTAAATCTTGCTAAAGTATCAAGGGCTAAGGCAAGAGCAAGGGCCAGAGAAAGAACAAAGGAGAAAATGTGCATCAAGAAGCTTAATGAATCA---AGAAAC---ATGGAT---CCTGAT---TTG---AACCCTTCAAACCAA---ATTCAG---------------------------------------------------------------------------------------------------CCCACCCTCCACTGTCACTTA---ACTAATAATGTA------------TCTGCTGCAACAACT---GAAGATTTAATTCAA---GAATCCATTGTTTTTAAAAGGATGTTGAAA---------CAGTACCCT---TCATTTTTTGGATTT---CAACAAAACCTT---ATCATTTCAAGGGATTTG------AACTGCAAT---CTCCCTTCTCCT------------------------------------------------AATATCAACGATAATTGGGAT---ATCAATAGCTTAACC---------------------------------------------------TCACAATCCAAC---CTGTGTGACATTTTG------GATCAGCACAAATTCATA Streptocarpus_holstii_Gcyc1A ATGCTAGGTTTCGACAAGCCCAGTAAGACACTCGACTGGCTGTTGACGAAATCAAAAGTCGCCATCAAAGATCTG---------GTGCTTAACAAG---ACGAGT------------------TCCAGCTCT---AGAAGC------------ACTTCCTCCCCTTCA------GAATGT------GAAGTAGTATTG---------AAT---GGTGAGGCT---TTTGAAGATGGGAACTGCTTACCA---CACCCGGATTCG---AGAAAA---TCGTCGTCGATGAATGCC------------------------AAAAAATGT------------AAAGATCCAGCACAGAGGGCATCAAAGCTAGCTAAAGAGTCAAGGGCTAAGGCTAGAGCAAGGGCTAGAGAAAGAACAAAGGAGAAAATGTGCATCAAGAAGCTGAATGAATCA---AGAAAC---ATG---------------------------------------------------AACAAC---AATTTTTTT---------------------GCATCTGAT---------------------------------------AGTCACCCTGTTTTTCATTGCCCCATA---ACTAAT---GAAGCTACT---------------GCAACACATGAAGACCTAATTCAA---GAATCCAGTGTCATTAAAAGGATGCTGAGG---------CATCACCAGTCGTCGTTTTTCGGGTTT------------------------------------------CAATTCGGT---TTACCATCTCCT------------------------------------------------TATGTCAATGAGAACTGGGAT---GTTGGCAGCTTAACA---------------------------------------------------TCCCAATCCAAT---TTGTGTGACATTTTG------GATCAGCACAAATTCATA Streptocarpus_holstii_Gcyc1B ATGCTAGGTTTCGACAAGCCGAGTAAGACACTCGACTGGCTGTTGACGAAATCAAAAGTCGCCATCAAAGATCTG---------GTTCTTACCAAT---AAGAGC------------------TCTAGCTCT---AGGAGC------------CCTTCCTCCCCTTCA------GAATGT------GAAGTTGCGTTG---------AAT---GATGAAGCT---TTTCAAGATGGGAGCTGCTTACTA---CCCCCAGATTCCAAGAGGAAT---TCGGCATCGACA------------------------------------------------GCTAGAGATCCAGCACAGAGTGCATCAACTCTAGCTAAAGAATCAAGGGCTAAGGCAAGAGCAAGGGCTAGGGAAAGAACAAAGGAGAAACTGTGCATCAAGAAGCTgAATGAATCC---AGAAAC---ATG---------------------------------------------------AACAAC---AATCTGTTT---------------------ACATCTAAc---------------------------------------AGCCAACCTGTTCTTCACTGCCCCATA---ACTAAT---GAAGCTACT---------------GCAACTCAACAAGACCTAATTCAA---GAATCCAGTGTCATTAAAAGGATGCTGAGG---------CACCACCAG---TCGTTTTTCGGGTTT------------------------------------------CATTGTGCCGCCCTACCGTCTCCT------------------------------------------------GATGTCAATGAGAACTGGGAT---GCTGGCAGCTTAACC---------------------------------------------------TCACAATCCAAC---TTGTGTGACATTTTG------GATCAGCACAAATTCATA Tetranema__mexicanum_Tcyc2 ATGCTAGGTTTCGACAAGCCAAGCAAAACCCTTGATTGGCTGCTCACGAAATCGAAGGCAGCCATTAAGGAGCTG---------GTGCAGTCCAAA------------------------------AGTGCT---AAAAGT---------GCGTCTTCTTCCCCATCT------GAATGTGAG---GAGGTGGTTTCTGCCGGAGGAAAT---GGGGAGGCT---TCTGAGAATGGGAACTATTTG------GGAGCAGATTCAAAAGGGAAA---TCGGTGCTGCTGAGCTCT------------------------AACAAATGCAAAGGA---GCAAAGGATTCACAGCAGGCTGCATTGAATCTTGCGAAAGAGTCGAGGGCAAAGGCAAGAGCAAGGGCCAGAGAAAGAACCAAGGAAAAAATGTGCATCAAGCAGCTCAATGAAGCC---AGAAAC---AAGGGTTCTTCAGAC---TGG---AATCCCTCCATCCTA---ATTCAGTCCAAGCACCATCAT---CAATTTGAAGTT------------TCAGGAAGCCGC------------------------------------------GAGCCGATCCTCCATTACCCCCTA---GCTTAT---GAA------------------GCTGCAACT---GAAGACCTAATTCATCATGAATCCATTATGATCAAGAGGAAGTTGAAG------------CACCCT---TCCATTTCTGCGCTTCATCAACAAAATCTC---AGCGGTTCGAGAAATTTGAATTCAAACTGCAGT---ATCCCTTCTGCT------------------------------------------------AGTGCCACTGAGAATTGGGAT---TATAGTAACTTTATC---------------------------------------------------GCACAGTCCAACCAGCTATGTGCCATTTTG------GATCAGCACAAATTCATA Titanotrichum_oldhamii_Gcyc1 ATGCTAGGTTTCGACAAGCCAAGTAAAACCCTTGAGTGGCTGCTCACGAAATCGAAAGCAGCCATTAAGGAGCTG---------GTGCAGACGAAG---AAAAGTACC------------AGTGCTAGTGCT---AAGAGC------------ATTTCTTCCCCTTCT------GAATGC------GAGGTAGTGTCTGCAGGA---CAT---GGTGAAACT---TTCGAAAATAGGAACTATTTA------GGAGCAGATTCAAAGAAGAAA---TCAGTACTGCTGAATTCT------------------------TACAAATGTAAAGAA---GCAAAAGATCCACAGCAGGCTGCATTAAATCTTGCTAAAGTATCAAGGGCTAAGGCAAGAGCAAGGGCTAGAGAAAGAACAAGAGAGAAAATGTGCATCAAAAAGCTTAACGAATCA---AGAAAC---ATGGGT---CCTGAT---TTG---AACCCA------------ATTCAGTCT---AGAAAC---AATCTATTTGAAGCTTGCAAATTA---TCTGCTTCTAAT---------------------------------------AGCGATCCTATCCTTCATTGTCCCTTA---ACTAAT---GTA------------GCCGCTGCAGCAACT---GAAGACCTAATTCAA---GAATCCATAGTCATCAAAAGGATGTTGAAG------------CACCCT---TCATTTTTTGGGTTT---CAGCAAAACCTT---ATCATTTCAAGAGATTTG------AACTGCAGT---ATCCCATCTCCT------------------------------------------------AACGTCAATGATAATTTCGAT---ATCAGTAGCTTAACC---------------------------------------------------TCACAATCCAAC---CTATGTGACATTTTG------GATCAGCACAAATTCATA Antirrhinum_majus_cyc ATGCTAGGTTTCGACAAGCCGAGCAAAACCCTTGATTGGCTGCTCACTAAGTCGAAAACCGCTATCAAAGAGCTT---------GTGCAGTCTAAA------------------------AGTACT---------AAGAGCAAC---------TCTTCCTCCCCTTGTGAT---GATTGTGAG---GAAGTTGTGTCTGTA---------------GAT------TCTGAGAATGTGACA------------GAT---CATTCAAAGGGGAAA---TCACTG------AAGGCT---------------------AACAACAAATGTAAAGAA---GCAATGGATTCACATCAAGCAGCA---------GCCAAAGAGTCGAGGGCGAAGGCGAGAGCGAGAGCTAGGGAAAGAACTAAGGAGAAGATGTGTATCAAACAACTGAATGAAGCTATA------------------------------------------GTACTG---------------AGGAACCAT---CAATTTGAAGTT------------TCGGGTACCCGT------------------------------------------------------------------------------GAG------------------GCG---------------------------------TTTGTT------------------------------CATCCA------GTTTTCGGGTTTCATCAGCAAAAC---------------------------------TATGGC---AACGCATCTCAT---------------------------------------------------------GAGAACTGGGAT---CAGAGTAACCTTTCT---------------------------------------------------TCGCAGTCGAACCAGCTATGCGCCATTTTG------AATCAGCACAAGTTCATA Antirrhinum_majus_dich ATGCTAGGTTTTGACAAGCCTAGCAAAACCCTTGATTGGCTGCTCACGAAGTCGAAGGAAGCTATTAAGGAGCTC---------GTGCAGTCGAAA------------------------AGCTCG---------AAAAGTAAT------ATTTCTAATTCTCCTTCT------GAATGTGATCAAGAGGTTTTGTCTGCG---------------GACTTGCCT---------------TATATT---------GGATCATCAAAAGGAAAAGCTGCAGTAGGGCTAAATTCT------------------------AACAAATGTAAAGGG---GGAAGGGAC------------GCGGTGGATCTTGCGAAGGAGTCGAGGGCGAAGGCGAGAGCGAGGGCTAGGGAAAGAACTAAGGAGAAAATGTGCATCAAACAGCTTAATCAAGAA---AGAAAC---AAGAGC---TATGAG---TGG---AACCCCTCAGTTCTA---TTTCAGTCAAAG---AGTAGTCAACAATTTGAAGTT------------TCAGGTCCCTCA---------------------------------------------------------------------ACTAAT---------------------------------TATGAAGAACTAAATCAA---GAATCCATCATGATCAAGAGGAAGTTGAAG------CAGAACCACCCT---TCAATGTTTGGGTTT---CAACCTGAA------------------------------------------------------------------------------------------------------AATGCCACTGAGAATTGGGATTATTACAGTAACTTTACC---------------------------------------------------TCACAGTCCAACCAGCTATGTGCCATTTTG------GATCAGCATAAGTTCATA Besleria_labiosa_Gcyc1 ATGCTAGGTTTTGACAAGCCAAGCAAAACCCTTGAGTGGGTGCTAAAGAAATCAAAGGCCGGGATTAAAGAATTG---------GTGCAGACAAAAGAAAATAGTGGGAATGCTAATGCCAGTGCTAGTGCTGCTAAGAGC------------ATTTCTTCGCCTTCT------GAGTGT------GAGGTGGTGTCTGCAGGA---AATTACGGCGAAGCCCCTTACGAAAACGGGAGCTACGTGGCGTGTGCTGCGGATTCAAGGAAGAAA---------------------------------------------------------------------GATCCACAGAAGAATGTGTTGAATCTTGCTAAAATGTCGAGAGCCAAGGCGAGGGCGAGGGCGAGGGAAAGAACGAGAGAGAAAATGTGCATAAAGAAGTTTAATGAATCA---AGGAACAATATGTGTGGCCCTGATCATTTGATCAACCCTTCAAGCTCATCAATTCATTCA---AGAAAC---GATATGTTTGAAGTTTGT------CCCATG---AGTAAT------------------------------------------------------------------------------GTGGCATCTTCTGCTGCAGCAGCTCCAAAT---GAAGACCTAATTCAA---GAATCCATTGTCATCAAAAGGATGTTGAAG------------CACCCGTCTTCGTTCTTCGGATTT---CAACAAAACCTT---ATTATTTCAAGAGATTTG------AACTGCACT---CTCCCATCTCCT------------------------------------------------AATGTGAGTGACAATTGGGAT---ATTAGTAGCTTTAAC---------------------------------------------------TCACAGTCAAAT---CTATGTGACATTTTG------GATCAGCACAAATTCATA Calceolaria_arachnoidea_Ccyc1 ATGCTAGGTTTCGACAAGCCGAGTAAAACTCTCGAGTGGCTATTGACCAAGTCAAAATCCGCCATTAAGGAG------------------ACGAAA---GAG---------------------------------AAGTGT---------ACTTCTTCCTCACCGTCT------GAATGT------------GTTTCTGCAGGT---AAC---GGTGAA---------------------TTTTTA------------GATTCAAAGGGAAAA---TCT------------------------------------------------AAAGGATCTGGAAAAGAG------------GCGTTGAATCTCGCAAAAGAGTCGAGGGACAAGGAGAGAGCGAGAGCTAGGGAAAGAACGAGGGAGAAAATGAACTTAAAAAAGCTCGACGAATCG---------------------------------------------------------------------AAC---CAAGTTTTTGAT---------------------------------------------------------------------------------CACTTTCCATCG---AGTAGT---------------------------ACTGCT---GAAGATCTTATTCGA---GAATCGATTCTCGTAAAGAGGATGATGAGA------------CACCCT---TCGATTTTCGGGTTC---CAGCAAAACGAT---ACCGTTTCAAGACAT------TCAAATTTTAATAATTTTCAATCTCAT------------------------------------------------AATGTGAATGAGAATTGGGAT---TTGAGCAACTTGAAC---------------------------------------------------TCACAATCCAAC---TTATCGGACATTTTG------GATCAGCACAAATTCATA Calceolaria_arachnoidea_Ccyc2 ATGCTAGGTTTCGACAAGCCGAGCAAAACCCTCGATTGGCTACTCACGAAATCGAAAGCTGCCATTAAAGAGCTG---------GTGCAGAACAAG---CAA---------------------GGAACTGAT---AAGAAC---------------------ATTTAT------GAATGTGAC---GAGGTT---------------------------------ATAGAAAATGGGAAC------------------ATATCGAAGAGGAAA---TCT------------------------------------------AAATGTAAGGGAGTAGTAAAAGATCCC---------GCGTTGAATAGTGTGAAAGAATCGAGGGATAAGGCGAGAGCGAGGGCTAGGGAAAGAACAAGAGAGAAAGTAAATGCGAAAAAAATCGATGAGTGC---AGAAATAATATGTGTTCTTCTGAT---TTG------------------------------------AAC---AATATGTTC---------------------AGTAGCAAT---------------------------------------------------------TTTTCGTTA---CCTAAT---GAA---------------GCTGTGGTAACT---GAAGATTTTACTCAA---GAATCGATTCTCATCAAGAGGATGATGAAA------------AACCCT---TCGATTTTTGGGTTT---CAGCAAAACATC---GGCGGT------------------------AGT---TTTCCGTGTCCTAAT---------------------------------------------AATGTCGGCGAGAACTGGGAT---ATGAGTAGCTTAAAC---------------------------------------------------TCACAAACCAAT---TTGTGTGACATTTTG------GATCAGCACAAATTCATA Chrysothemis_pulchella_Gcyc1 ATGCTAGGTTTCGACAAGCCAAGTAAAACCCTTGACTGGTTACTCACTAAATCTAAAGCAGCCATTAAGGAGCTG---------GTGCAGGCTAAG---AAAAGT------------GGGAGTGGGAGTGCT---AAGAGC------------ATTTCTTCCCCTTCT------GAATGC------GAGGTAGTGTCTGCAGGA---AAT---GGTGAAACT---TTCGAAAATGGCAGCTATTTG------GATGCTGATTCAAAGAAGAAA---TCACTGCCCGTGAATCCT---------------------AACTACAAGTGTAAAGAATATTCAAAAGATCCACAGCAGTCTGCATTAAATCTTGCTAAAGTATCAAGGGCTAAGGCAAGGGCAAGGGCCAGAGAAAGAACAAGAGAGAAAATGTGCATCAAGAAGCTTAATGAATCA---AGAAGC---ATGGAT---CCTGAT---TTG---AACCCTTCAAACCAA---ATTCAG---------------------------------------------------------------------------------------------------CCTACCCTCCACTGTCCCTTA---ACTAATAATGTA------------CCTGCTGCGACGACT---GAAGATTTAATTCAA---GAATCTATTGTCATTAAAAGGATGTTGAAA---------CAGTACCCT---CCATTTTTTGGATTT---CAACAAAACCTT---ATCATTTCAAGGGATTTG------AACTGCCAT---CTCCCTTCTCCT------------------------------------------------AATATCAACGACAATTGGGAT---ATCAATAGCTTAACC---------------------------------------------------TCACAATCCAAC---CTGTGTGACATTTTG------GATCAGCACAAATTCATA Cyrtandra_apiculata_Gcyc1 ATGCTAGGTTTCGACAAGCCAAGTAAAACACTTGAGTGGTTGTTAACGAAATCGAAAGTAGCCATTAAAGATCTG---------GTTCACACAAAG---AAAAGT------------------TCTAGTGCT---AGGAGC------------ACTTCTTCCCCTTCT------GAATGC------GGAGTAGTGTTA---------AAT---GGTGAAGCT---TTTGAAAATGGGAGTTGTTTATTA---GGTGCAGATTTGAAAAGAAAA---TCGGTATCGATGAATGCT------------------------AACAAATGTAAAGGA---GCTAAAGATCCAACACAGAGTGCATCAACTCTAGCTAAAGAATCAAGGGCTAAGGCAAGAGCAAGGGCTAGGGAAAGAACCAAGGAGAAAATGTGCATCAAGAAGCAAAATGAATCA---AGAAAC---ATGTGT---TCTAAT---TTA---AATCCTTCCGTCCCA---ATTCAG------AGAAAC---AATTTGTTTGAAGTTTGCAGA---CCCTTTGCATCTAAT---------------------------------------------AGTATTCTTCATTGTCCCATA---ACTAAT---GAAGCAACTGCCTCTACAGTAGCAGCAACTCATGAAGACCTAATTCAA---GAATCCAATGTCATTAAAAGGATGCTGAGG---------CACCACTCT---TCGTTTTTCGGGTTC------------------------------------------CATTGCAGT---CTCCCATCTCCT------------------------------------------------AATGTTAATGAGAATTGGGAT---GTTAGCAGCTTAACC---------------------------------------------------TCACAATCCAAC---TTTTGTGACATTTTG------GATCAGCACAAATTCATA Cyrtandra_apiculata_Gcyc2 ATGCTAGGTTTCGACAAGCCAAGTAAAACCCTTGAATGGCTGCTTACAAAATCAAAAACAGCAATTAAGGAGCTG---------GTGCAGATAAAG---AAAAGT---------GATGCCCCTACTTGCACTAATAAGAGA------------ATTTCGTCCCCTTCA------GGGTGC------GAGGTA---------------ATA---GAG---------TTGGAAAATGGGAACTACTTA------GACGCGGATTATAATGGGAAC---TTGGTCCCGGCCAATACT------------------------TACAGATGTAGAAGA---GCAAAAGATGCACAGCAGGATGTATGGAACCTTGCCAAAGACTCGAGGGCTAAGGCAAGAACAAGGGCTAGGGAAAGAACGAGAGAAAAAATGTGCATGAAGAAGCTTACTGAATCA---AGCAAC---ATGGCT---TCTGAC---TTG---AACCTTTCAATCCCA---AGTCAGGCT---AGAAAA---AGTTTCTCAGAAGTTTGCAAAGTACCCCCT---TCTAAT---------------------------------------ACTGAGCCTAGGCTCCATTTTCCCTTA---ACCAAT------------------ACAGCTGCTGCAACT---GAAGACCTAATTCAA---GAATCCCTTGTCATCAGAAGGATGTTGAAG------------CACAAT---TCGATGCTCGGGTTT---CAGCAAAAC---------------------------------------------------------------------------------------------------------GTAAATCAAAATTGGGAT---ATTAGCAGCTTAACA---------------------------------------------------GCACGATCCAAC---CTATGTGACATTTTG------GATCAGCACAAATTCATA Didymocarpus_citrinus_Gcyc1C ATGCTAGGTTTCGACAAGCCAAGTAAAACACTTGACTGGTTATTAACGAAATCGAAGGTAGCCATTAAAGATCTG---------CTTCATACAAAG---AAAAGT------------------TCTAGTGCT---AGGAGC------------ACTTCTTCGCCTTCT------GAATGC---------GTAGGGTTA---------AAT---GGTAAAGAT---TTTGAATATGGGAGTCGTTTATTA---CCTGCGGATTCAAAGAGAAAA---TCTGAGTTGATGAATGCG------------------------AACAAATGTAAAGGA---GCTAAAGATCCAACACAGAGTGCATCAACTCTATCTAAAGAATCAAGGGCTAAGGCAAGAGCAAGGGCTAGGGAAAGAACGAAGGAGAAAATGTGCATCAAGAAGCTAAATGAATCA---AGAAAC---CTG------------------------------------------------------AAC---AGTTTGTTCGAAGTTCATAGA---CCATCTTCATCTAAC---------------------------------------AGCCAGCCTATTCTTCATTGTCCCATA---TCCAAT---GAAGCTACTGCTGCCACAGTGGCAGCAACT---GAACACCTAATTCAA---GAATCCAATGTCGTTAAAAGGATGTTGAGGCACCATTATTATCACCCT---TCTTTTTTCGGGTTT------------------------------------------CATTGCAGT---TTCCCATCTCCA------------------------------------------------------AATGAGAATTGGGAT---GTTAGCAGTTTAACC---------------------------------------------------TCGCAAACCAAC---TTTTGTGACATTTTG------GATCAGCACAAATTCATA Didymocarpus_citrinus_Gcyc1D ATGCTAGGTTTCGACAAGCCAAGTAAAACACTTGAGTGGTTGTTAACGAAATCGAAAGTAGCCATTAAAGATCTG---------GTTCACGCAAAG---AAAAGT------------------TCTAGTGCT---AGGGGC------------ACTTCTTCCCCTTCT------GAATGC------GAAGTAGTGTTA---------AAT---GGTGAAGCT---TTTGAAAATGGGACTTGTTTAGTA---GGTGCAGATTCGAAGAGAAAA---TGGGTATCGATTAACGCT------------------------AACAAATGTAAAGGA---GCTAAAGATCCGTCACAGAGTGCATCAACTCTAGCTAAAGAATCAAGGGCTAAGGCAAGAGCAAGGGCTAGGGAAAGAACCAAGGAGAAAATGTGCATCAAGCAGCTAAATGAATCA---AGAAAC---ATGGGT---TCTATT---TTA---AATCCTTCAGTTCCG---ATTCAG------AGGAAC---AATTTGTTTGAAGTGTGCAGA---CCATCAGCATCTAAT---------------------------------------------AGTATTCTTCTTTGTCCCATA---ACTAGT---GAAGCAACTACTGCTACAGTAGCAGCAACTCATGAAGACCTAATTCAA---GACTCCAATGTCATTAAAAGGATGCTGAGG---------CACCACTCT---TCGTTTTTCGGGTTC------------------------------------------CATTGCAGC---CTTCCAGCTCCT------------------------------------------------AATGTCAATGAGGATTGGAAT---GTTAGCAGCTTAACC---------------------------------------------------TCACAATCCAAC---TTTTGTGACATTTTG------GATCAGCACAAATTCATA Epithema_benthamii_Gcyc1 ATGCTAGGTTTCGACAAGCCTAGCAAAACCCTTGAGTGGCTTCTAACAAAGTCCAAAGCAGCAATCAAGGATCTT---------GTGCTCTCCAAA---AAATGT------------GCAAGTTCTAGTGCT---AAGAGC------------ACTTCCTCCCCTTCT------GAA------------GTGGTG------------AAT---GGGGAGGAT---TTTGAGACTGGGAATTCTTTAGTG------GCCGATTCGAAGAGGAAG---TTGGTGGTTACG---------------------------------AGATGTAGAGGA---GGTAAAGATCCGCAACTAGCTGTGCCAAATCATGAAAAAGAGTCGAGGGCAAAGGCCAGAGCGAGGGCCATGGAAAGGACCAAGGAGAAAATGTGCATGAAGAAGCTCAATGAAACA---AGAAAC---TTGGGG---CCTGAT---GTG---AACCCTGCAATGCCA---ATGCAG---------------------------------------------------------------------------------------------------CCAATTTTCCAGTGTCCCTTG---ACAAAT---GAA------------GCTGCATCCAAC------GAAGACCTAATTCAA---GAATCTTTCACCGTTAGGAGAATGTCGAAG---------CATCAGCCG------TTTTTCGGGTTT---CAACAA---------------------------------------------------------------------------------------------------------------AATGAGAACTGGGAT---ATAACCAGTTTACCC---------------------------------------------------TCACAATCCAAT---CTTTGTGACATTTTG------GATCAGCACAAATTCATA Epithema_benthamii_Gcyc2 ATGCTAGGTTTCGACAAGCCAAGTAAAACACTCGAGTGGCTGCTCACGAAATCAAAAGCAGCCATTAATGAGCTC---------GTGCAGATGAAA---AAAAGT---------ACTACTAGTACTAGTACT------AGT---------------------GCTCGT------GAATGC------CAGGCACCATCAACAGGA---AATGATACTCAAGCT---TTAGAAAACGGA---------------------------------------------------------------------------------AACAAATGTAAGAGG---GGGAAAGATTTACCA---------TTGAATGTTGCTAAAGAATCAAGGGTTAAAGCAAGAGCAAGGGCTAGAGAAAGAACACAGGAGAAAATGTGCATAAAAAAGCTTAATGAATCG---AGAAAC---TTG---TCTTCGGGT---CTC---CACTCTTCAGACCCA---ATTCAGTCA---AGAAAT------------------------------------------------------------------------------------------------------CACTTG---AACAAT---ATA------------TCGGCTGCATCAAGT---GATGATCTAATTCAA---GAATCAGTTCTCATCAAAAGGATGTTGAAG------------GACCCT---TCATTTTTCGGGTTC---CAAGAAAACCTT---ATCATTTCCAGAGATTTG------AGTTACAGT---ATCCCTTACGAT------------------------------------------------AGTGCCAATGAGAATTGGGAT---ATCAGTACCTTAAGC---------------------------------------------------GAACAATCCAAC------------ATTTTG------GATCAGCACAAATTCATA Fieldia_australis_Gcyc1E ATGCTAGGTTTCGACAAGCCAAGTAAAACCCTTGAGTGGCTGCTCACGAAATCGAAAGCAGCCATTAAGGAGCTG---------ATGCAGACGAAG---AAAAGA------------GCCAGTGCTAGTGCT---AAGAGC------------ATTTCTTCCCCTTCT------GAATGC------GAGGTCGTGTCTGCAGGA---AAT---GGTGAAGCT---TTCGAAAATGGGAACTATTTA------GATGCAGATTCAAAGAGGAAA---TCGGTACTGCTGAATGCT------------------------TACAAATGTAAAGAA---GCAAAAGATCCACAGCAGGCTGCATTAAATCTTGCTAAAGTATCAAGGGCTAAAGCAAGAGCAAGGGCTAGAGAAAGAACAAGAGAGAAAATGTGCATCAAAAAGCTTAACGAATCA---AGAAAC---TTGGAT---CCTGAT---TTG---AACCCCTCAAACCCA---ATTCAGTTC---AGAAAC---AATCTATTCGAAATTTGCAAATTA---TCTGCTTCTAAT---------------------------------------AGCGAGCCTATCCTTCATTGTCCCTTA---ACTAAT---GTA------------GCTGCTGCAGCAACT---GAAGACCTAATTCAA---GAATCCATTGTCATCAAAAGGATGCTGAAG------------CACCCT---TCATTTTTTGGATTT---CAACAAAACCTT---ATCATTTCAAGAGATTTG------AACTGCAGT---CTCCCATCTCCT------------------------------------------------AATATCAATGATAATTGGGAT---ATCAGTAGCTTAACC---------------------------------------------------TCACAATCCAAC---CTATGTGACATTTTG------GATCAGCACAAATTCATA Fieldia_australis_Gcyc1F ATGCTAGGTTTCGACAAGCCAAGTAAGACCCTTGAGTGGCTGCTCACGAAATCGAAATCAGCCATTAAGGAGCTG---------GTTCAGACAAAG---AAAAGT------------GGCAGTGCTAGTGCT---AAGAGC------------ATTTCTTCCCCTTCT------GAATCC------GAGGTAGTGTCTGCAGGA---AAT---GGTGAAGCT---TTCGAAAATGGGAACTATGTT------GGTGCAGAT---------------GACCGTCCGTTAAACTACCAAAAAAACTTCAAGTTGAATGCTTACAATTGTAAAGAA---GCAAAAGATCCACAGCAGGCTGCAATTAATCTAGCCAAAGTTTCAAGGTCTAAAGCAAGAGCAAGGGCTAGAGAAAGAACAAGAGAGAAAATGTGCATCAAGAATCTTAACGAATCG---AGAAAC---ATGGAT---CTTGAT---TTG---AACCCCTCA---ACA---ATTCAGTCT---AGAAAC---AATCTATTTGAAGTTTGCAAATTA---TCTGCTTCTAAC---------------------------------------ATCCAGCCTCTTCTCCATTGTCCCTTA---ACTAAT---GAA------------ACTGCTGCCGCAACT---GAAGACCTAATTCAA---GAATCCATTGTCATCAAAAGGATGTTGAAG------------CATCCT---TCGTTTTTTGGATTT---CAACAAAACCTT---ACCATTTCAAGAGATTTG------AACTGCAGT---CTCCCATCTCCT------------------------------------------------AATATCAATGATAATTGGGAT---ATTAATAGCTTAACC---------------------------------------------------TCACAATCCAAC---ATATGTGACATTTTG------GATCAGCACAAATTCATA Gesneria_humilis_Gcyc1 ATGCTAGGTTTCGACAAGCCAAGTAAAACCCTTGACTGGTTGCTCTCTAAATCTAAAGCAGCCATTAAGGAGCTG---------GTGCAGGCTAAG---AAAAGT------------GGGAGTGGTAGTGCT---AAGTGC------------ATTTCTTCCCCTTCT------GAATGC------GAGGTAGTGTCTGCAGGA---ACT---GGTGAAACT---TTCGAAAATGTCAGCTATTTG------GATGCGGATTCAAAGAAGAAA---TCACTGTCCCTGAATCCT---------------------ATTTACAAGTGTAAAGAATATTCAAAAGATCCACAGCAGTCTGCATTAAATCTTGCTAAAGTATCAAGGGCTAAGGCAAGAGCAAGGGCCAGAGAAAGAACAAGAGAGAAAATGTGCATCAAGAAGCTTAATGAATCA---AGAAAC---ATGGAC---CCTGAT---TTG---AACCCTTCAAACCAA---ATTCAG---------------------------------------------------------------------------------------------------CCTACCCTCCACTGTCCCTTA---ACTAATAGTGTA------------CCTGCTGCAACAACT---GAAGATTTAATTCAA---GAATCCATTGTCATTAAAAGGATGTTGAAA---------CAGTATCCT---TCATTTTTTGGATTT---CAACAAAACCTT---ATCATGTCAAGGGATTTG------AACTGCAAT---CTCCCTTCACCT------------------------------------------------AATATCAACGATAATTGGGAT---ATCAATAGCTTAACC---------------------------------------------------TCACAGTCCAAC---CTGTGTGACATTTTG------GATCAGCACAAATTCATA Jovellana_punctata_Ccyc2 ATGCTAGGTTTCGACAAGCCAAGTAAGACCTTGGAGTGGCTACTCACGACATCGAAAGCAGACATTAAAGAGCTG---------GTGCAGACCAAG---CAA---------------------AGTACTGCT---AAGAAC---------------------ATTTCT------GAATGT------GAAGCTGTGTCA---------AAT---GGAGAAGTT---CTTGAAAATGGGAACTGTGTATGG------GCAGATTTGAAGAGGAAA---TCT------------------------------------------AAATGTATAGGA---GTAAATGATCCC---------GCATTAAATCTTGCGAAAGAATCGAGGGATAAAGCTAGAGCAAGGGCTAGGGAAAGAACAAGAGAGAAAGTAAACGCGAAAAAACTCGACGAATGC---AGAAGAAATATGGGTTCTTCTGAT---TTG------------------------------------AAC---AATCTGTTT---------------------------AATACC---------------------------------------------------CATTTTCCGTTA---CCTAAT---GAA---------------GCTGCAGCAACT---GAAGATTTTACTCAA---GAATCCGTTCTCATCAAAAGGATGATGAAA------------CTCCCT---TCTATTTTCGGGTTT---CAGCAGAACCTT---AGCAGT------------------------AGT---TTCCCATGTTCT------------------------------------------------AATGTGGGTGAGAATTGGGAT---ATTAGTAACTTAAAC---------------------------------------------------TCACAATCCAAT---CGGTGTGACATTTTG------GATCAGCACAAATTCATA ; END; BEGIN CODONS; CODONPOSSET * CodonPositions = 1: 1 - 1018 \ 3 , 2: 2 - 1019 \ 3 , 3: 3 - 1020 \ 3 1020 ; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; EXSET amb_noTCPR3rd = 12 21 - 36 \ 3 42 - 75 \ 3 76 - 84 106 - 117 133 - 135 142 - 153 277 - 318 369 - 381 \ 3 387 - 408 \ 3 417 - 423 \ 3 432 - 453 \ 3 469 - 474 568 - 579 649 - 678 745 - 747 814 - 816 829 - 831 ; END;