#NEXUS [written Thu Sep 16 12:06:52 EDT 2010 by Mesquite version 2.7 (build 510) at ComPhy.local/10.0.5.68] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=61; TAXLABELS Passiflora_vitifolia Passiflora_villosa Passiflora_vespertillo Passiflora_trisecta Passiflora_trifoliata Passiflora_trialata Tetrastylis_ovalis Tetrapathea_tetranda Passiflora_speciosa Passiflora_serratodigitata Passiflora_seemannii Passiflora_reflexiflora Passiflora_racemosa Passiflora_platyloba Passiflora_pittieri Passiflora_perfoliata Passiflora_parritae Passiflora_palmeri Passiflora_oblongata Passiflora_nitida Passiflora_murucuja Passiflora_multiflora Passiflora_miersii Passiflora_microstipula100a Passiflora_microstipula100 Passiflora_microstipula Passiflora_menispermifolia Passiflora_manicata Passiflora_maliformis Passiflora_magnifica Passiflora_ligularis Passiflora_laurifolia Passiflora_lancitillensis Passiflora_kawensis Passiflora_holosericea Passiflora_herbertiana Passiflora_guatemalensis Passiflora_glandulosa Passiflora_garkei Passiflora_edulisinter Passiflora_dilkea Passiflora_deidamioides Passiflora_cumbalensis Passiflora_crenata Passiflora_coccinea Passiflora_cirrhiflora Passiflora_ciliata Passiflora_candollei Passiflora_candida Passiflora_campanulata Passiflora_biflora Passiflora_auriculata Passiflora_aurantia Passiflora_antioquiensis Passiflora_andina Passiflora_ampullaceae Passiflora_alata Passiflora_affinis Adenia_sp. Passiflora_acuminata Passiflora_actinia ; END; BEGIN CHARACTERS; TITLE 'C: cpDNA, gaps missing, indels scored (LM2335)'; DIMENSIONS NCHAR=631; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Passiflora_vitifolia TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACGCTC Passiflora_villosa TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCACATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGAGATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACATTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAATAAA-AGATGTAAGTATAATT---AGTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACGCTC Passiflora_vespertillo TTTAGTTCTAGAATAATAA---------------------------TACAGTAC?-GGAAA-AAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTATGA-------------------CTAAGGACATAGT----CAGAAA----GGAGAATAAACGAAGAATAAACGAAGAATAAAAAAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------AGCTATATATATTTAT---------------------GAGATAAAAAA-GATATATGGGGAGAAGGATAGTGAAAAGAGTACGTTAAAACTTATGAGCTTCCCA----GTTAATAAAAGAAAA---------------------TCAGTTA-AGAAAA----TATAAAATAT---------AATCATAAAAAAA--GATGTAA------------GTATAATTAATACTTATTGATTCTT--------------------ACTTTTCAATTATCTATCCTAAGGACGTCA----CCTTAAGGATACCTACATGTTAAAGACAATACACTC Passiflora_trisecta TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAAAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTATTAGGTGTTAAGTTATACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATAT-------AAT----------AAGATGTGA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACGCTC Passiflora_trifoliata TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTGA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACGCTC Passiflora_trialata TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATTTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATAAACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTTACCTT---------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACGCTC Tetrastylis_ovalis TCTAATTCTAGAATAATAATATAATTCTAGAATAATTA--------TACAGTACA-GGAAA-AAAAGAAAGTAAAACTAAGATGGCTCTGACAACTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CATAAA----GGAGAATAAA-----------AGGAGAATAAAATCAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATAT---------------------GGTATAAAAAA-GATATACGGAGAGAAGGATAGTAAAAATAGTACGTTAAACCTTATGAGGTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAA-AGAAAA----TATAATATATATATATAT-AAT---AAAGAAA-AGATGTAA------------GTATAATTAATACTTATTGATTCTTACTTT--CTTATTGATTCTTACTTTTCAATTATCAATTCTAAGGACGTCAAATGATTTAAGGATACCTACATGTTAAGGACAATACGCTC Tetrapathea_tetranda -CTAACTCTAGAATAATAA---------------------------TACAGTACA-GGAAAT-AAAGAAAGTAAAAATAAGATGGCCTTGACAACTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAA----GGAGAATAAA---------------------------ATAAAAAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATAT---------------------GGTATAAAAAA-GATATACGGAGAGAAGGATAGTAAAAATAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAA-AGAAAA------TAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAATACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGGACGTCAAATGATTTAAGGATACCTACATGTTAAAGACAATACGCT? Passiflora_speciosa TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACGCTC Passiflora_serratodigitata TCTAATTCTAGAATAATAATACAA----------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGG-------------------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAACAGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAAGATACCTACATGTTAAATACAATACGCTC Passiflora_seemannii TCTAATTCTAGAATAATAATACAA----------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGG-------------------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTACTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAACAGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAAGATACCTACATGTTAAATACAATACGCTC Passiflora_reflexiflora TCTAATTCTAGAATAATAA---------------------------TACAGTACGGGGAAA--AAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAGGGAC-TTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGAGATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACGC?? Passiflora_racemosa TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA----------------------ATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGAGATAATATGGTATAAAAA-GGATATACAGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACGCTC Passiflora_platyloba TCTAATTCTAGAATAATAATACAA----------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGG-------------------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAA-GTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAAGATACCTACATGTTAAATACAATACGC?? Passiflora_pittieri TCTAAGTCTAGAATAATAA--------------------------------GACA-GGGAA-AAAAGAAAGTAAAAATAAGATGGCCTTGACAACTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAA----GGAGAAAAAAAGGAGAATAAAAGGAGAATAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAAGTGTTAAGTTAT---------------ACCTACATATATATAT---------------------GGTATAAAAAA-GATATACGGAGAGAAGGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAA-AGAAAA----TATAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAACATCTTATTGATTCTT-------------------ACGTTTCAATTATCGATTCTAAGGACGTCAAATGATTTAAGGATACCTACATGTTAAAGACAATACGCTC Passiflora_perfoliata TCTAATTCTAGAATAATAA---------------------------TACAGTACC-GGAAA-AAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTATGA-------------------CTAAGGACATAGT----CAGAAA----GGAGAATAAACGAAGAATAAACGAAGAATAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------AGCTATATATATTTAT---------------------GGGATAAAAAA-GATATATGGAGAGAAGGATAGTAAAAAGAGTACGTTAAAACGTATGAGCTTCCCA----GTTAAGAAAAGAAAA---------------------TCAGTTA-AGAAAA----TATAATATATATAT--------CATAAAAAAA--GATGTAA------------GTATAATTAATACTTATTGATTCTT--------------------ACTTTTCAATTATCTATCCTAAGGACGTCA----CCTTAAGGATACCTACATGTTAAAGACAATACACTC Passiflora_parritae TCTAAGTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAACCTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTCAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGGATAAAAA-GGATATACGGAGAGGGAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTGA------------GTATAATTAAGACTTATTGATTCTT--------------------ACATTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACG??? Passiflora_palmeri TCTAATTCTAGAGTAATAA---------------------------TACAGTAC-GGGAAAAAAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAATAATCTATGA-------------------CTAAGGACATTTT----CAGAAA----GGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTATATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TATAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAAATAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACA??? Passiflora_oblongata TCTAATTCTAGAATAATAA---------------------------TACAGTACC-GGAAA-AAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTATGA-------------------CTAAGGACATAGT----CAGAAA----GGAGAATAAACGAAGAATAAACGAAGAATAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------AGCTATATATATTTAT---------------------GGGATAAAAAA-GATATATGGAGAGAAGGATAGTAAAAAGAGTACGTTAAAACGTATGAGCTTCCCA----GTTAAGAAAATAAAA---------------------TCAGTTA-AGAAAA----TATAATATATATAT--------CATAAAAAAA--GATGTAA------------GTATAATTAATACTTATTGATTCTT--------------------ACTTTTCAATTATCTATCCTAAGGACGTCA----CCTTAAGGATACCTACATGTTAAAGACAATACACTC Passiflora_nitida TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAAAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAAACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAACACTAGTACGTTAAAACTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATATAT-AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACT--------CTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACG???????? Passiflora_murucuja TCTAATTCTAGAATAATAA---------------------------TACAGTACC-GGAAA-AAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTATGA-------------------CTAAGGACATAGT----CAGAAA----GGAGAATAAACGAAGAATAAACGAAGAATAAAATAAACTAAAGAATAG-ATAAAAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------AGCTATATATATTTAT---------------------GGGATAAAAAA-GATATATGGAGAGAAGGATAGTAAAAAGAGTACGTTAAAAAGTATGAGCTTCCCA----GTTAAGAAAAGAAAA---------------------TCAGTTA-AGAAAA----TATAATATATAT----------CATAAAAAAA--GATGTAA------------GTATAATTAATACTTATTGATTCTT--------------------ACTTTTCAATTATCTATCCTAAGGACGTCA----CCTTAAGGATACCTACATGTTAAAGACAATACACTC Passiflora_multiflora TCTAATTCTAGAATAATAA---------------------------TACAGTACA-GGAAA-AAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTATGA-------------------CTAAGGACATAGT----CAGAAA----GGAGAATAAA-----------CGAAGAATAAAAAAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTATATATATATA----------------------GGATAAAAAA--GATATACGGAGAGAAGGATAGTAAAAAGAGTACGTTAAAACTTATGAGCTTCCCA----GTTAAGAAAAGAAAA---------------------------------------TATAATATATATAT--------CATAAAAAAAAAGATCTAA------------GTATAATTAATACTTATTGATTCTT--------------------ACTTTTCAATTATCTATCCTAAGGACGTCA----CTTTAAGGATACCTACATGTTAAAGACAATACGC?? Passiflora_miersii TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGGATAAACCAGATTAGTCTTTACGAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGAGATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAATAAA-AGATGTAAGTATAATTGTAAGTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACGCT? Passiflora_microstipula100a TATAATTCTACAATAATAA---------------------------TACAGTACAGGGW-----AAGAAAGTAAAACTAAGATGGCCTTGACAACTTAAGTAATGG-----------------------GWAAGGACATTTT----CAGAAA----GGAGAATAAA----------------------ATAAACTAAAGAAGGG-----GAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCGGGW----GATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATAT-------------------------GGGWTAAAAAA-GATATACGGAGGGAAGGATAGTAAAAATAGTACGGG----WTTATGAGCTTCCCA----GTTAA-------------------------GAAAACTAAGAAA-AGAAAA----TAGGGWATAT------------CATAAAGAAA-AGATGTAA------------GTATAATTAATACTTATTGGG------------------------WCTTTTCAATTATCTATTCTAAGGACGTCAAATGATTTAAGG----GGWCATGTTAAAGACAATACGCTC Passiflora_microstipula100 TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAAAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAAACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAACACTAGTACGTTAAAACTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATATAT-AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACT--------CTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACG??? Passiflora_microstipula TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAAAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAAACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAACACTAGTACGTTAAAACTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATATAT-AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACT--------CTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACG??? Passiflora_menispermifolia TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACGAAGATAGTAAAAACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGAGATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAATTAAGAAATAGAAA------TTAAGAAATAGAAAA----TGTAATATATATATATAT-AAT---AAATAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAA-TACAATACG??? Passiflora_manicata TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTCAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGGAGATAGTAAACCTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATATAT-AAT---AAAGAAA-AGATGTGA------------GTATATTTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTT??????????????? Passiflora_maliformis TCTAATTCTAGAATAATAATACAA----------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGG-------------------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAAGATACCTACATGTTAAATACAATACGC?? Passiflora_magnifica TCTAATTCTAGAATAATAATACAA----------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGG-------------------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCACCTTGGTATAAACCAGATTAGTCTTTACTAAGAGAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACAGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATATAT-------AAAGAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGAT-CTA-GAACGTCAA-TGATTTAAAGATACCTACATGTTAA-TACAATACG??? Passiflora_ligularis TCTAATTCTAGAATAATAATACAA----------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATTTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGG-------------------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCACCTTGGTATAAACCAGATTAGTCTTTACTAAGAGAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAAGATACCTACATGTTAAATACAATACR??? Passiflora_laurifolia TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAATAAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------GTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATAC????????? Passiflora_lancitillensis TCTAATTCTAGAATAATAATATAATTCTAGAATAATAA--------TACAGTACA-GGAAAAAAAAGAAAGTAAAACTAAGATGGCCTTGACAACTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAA----GGAGAATAAA----------------------ATAAACTAAAGAAAAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATAT---------------------GGTATAAAAAA-GATATACGGAGGGAAGGATAGTAAAAATAGTACGTTAAACCTTATGAGCTTCCCA----GTTAA-------------------------GAAAACTAAGAAA-AGAAAA----TATAATATATATAT--------CATAAAGAAA-AGATGTAA------------GTATAATTAATACTTATTGATTCTT--------------------ACTTTTCAATTATCTATTCTAAGGACGTCAAATGATTTAAGGATACCTACATGTTAAAGACAATACGCTC Passiflora_kawensis TCTAAGTCTAGAATAATAA--------------------------------TACAGGGGAA--AAAGAAAGTAAAAATAAGATGGCCTTGACAACTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAA----GGAGAATAAA-----------AGGAGAATAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATAT---------------------GGTATAAAAAA-GATATACGGAGAGAAGGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAA-AGAAAA----TATAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAATACTTATTGATTCTT--------------------ACGTTTCAATTATCGATTCTAAGGACGTCAAATGATTTAAGGATACCTACATGTTAAAGACAATACGCTC Passiflora_holosericea TCTAATTCTAGAATAATAA---------------------------TACAGTACA-GGAAA-AAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTATGA-------------------CTAAGGACATAGT----CAGAAA----GGAGAATAAA-----------CGAAGAATAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTATATATATAT-----------------------GGGATAAAAAA-GATATACGGAGAGAAGGATAGTAAAAAGAGTACGTTAAAACTTATGAGCTTCCCA----GTTAATAAAAGAAAA---------------------TCAGTTA-AGAAAA----TATAATATATATAT-----CATCATAAAAAAA-AGATGTAA------------GTATAATTAATACTTATTGATTCTT--------------------ACTTTTCAATTATCTACCCTAAGGACGTCA----CTTTAAGGATACCTACATGTTAAAGACAATACGCTC Passiflora_herbertiana TCTAATTCTAGGATAATAA---------------------------TACAGTACA-GGAAA-AAAAGAAAGTAAAACCAAGATGACCTTGACAATTTAAGTAATCTATGA-------------------CTAAGGACATAGT----CAGAAA----GGAGAATAAA-----------CGAAGAATAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTATATATATATAT---------------------GGGATAAAAAA-GATATACGGAAAGAAGGATAGTAAAAATAGTACTTTAAAAAGTATGAGCTTCCCA----GTTAATAAAA--------------------------------------------TATAATATATATAT--------CATAAAAAAA-AGATGTAA------------GTATAATTAATACTTATTGATTCTT--------------------ACTTTTCAATTATCTATCCTAAGGACGTCA----CTTTAAGGATACCTACATGTTAAAGACAATACG??? Passiflora_guatemalensis TCTAATTCTAGAATAATAA---------------------------TACAGTACA-GGAAA-AAAAGAAAGTAAAACTAAGATGGCCTTGACAACTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAA----GGAGAATAAA-----------CGGAGAATAAAATAAACTAAAGAATAG-TTAAGAGAAAGCAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATAT---------------------GGGATAAAAAA-GATATACAGAGAGAAGGATAGTGAAAATAGTACGTTAAAACTTATGAGCTTCCCA----GTTAAGCAAAGAAAA--------------CGAAAACTAAGAAA-AGAAAA----TATAATATATATAT--------CATAAAGAAA-AGATGTAA------------GTATAATTAATACTTATTGATTCTT--------------------ACTTTTCAATTATCTATCCTAAGGACGTCA----ATTTAAGGATACCTACATGTTAAAGACAATACG??? Passiflora_glandulosa TCTA-TTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTAA----AGATGTAAGTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACG??? Passiflora_garkei TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAACCTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACGAAGATAGTAAAAACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGAGATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAATTAAGAAATAAAAA------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAATAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACGTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACG??? Passiflora_edulisinter TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACGCTC Passiflora_dilkea -------CTAGAATAATAA---------------------------TGCAGTCC-GGGAAA--AAAGAAAGTAAAAATAAGATGGCCTTGACAACTTAAGTAATCTATGACTAAGGACATTATCTATGACTAAGGACATTTT----CAGAAA----GGAGAATAAA-----------AGGAGAATAAAAGAAAAAAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATAT---------------------GGTATAAAAAA-GATATACGGAGAGAAGGATAGTAAAAATAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA------------------------------AAAAA----TATA-TATATATAT-----AAT---AAAGAAA-AGATGTAA------------GTATAATTAA---TTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGGACGTCAAATGATTTAAGGATACCTACATGTTAAAGACAATACG??? Passiflora_deidamioides TCTAATTCTAGAAGAATTA---------------------------TACAGTACA-GGAAA-AAAAGAAAGTAAAACTAAGATGGCCCTGACAACTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAA----GGAGAATAAA----------------------ATCAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATAT---------------------GGTATAAAAAA-GATATACGGGGAGAAGGATAGTAAAAATAGTACGTTAAACCTTATGAGGTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAA-AGAAAA----TATAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAATACTTATTGATTCTTACTTT--CTTATTGATTCTTACTTTTCAATTATCAATTCTAAGGACGTCAAATGATTTAAGGATACCTACATGTTAAAGACAATACGCTC Passiflora_cumbalensis TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTCAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGGAGATAGTAAACCTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATATAT-AAT---AAAGAAA-AGATGTGA------------GTATACTTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACGCTC Passiflora_crenata TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAATAAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATATAT-AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACG??? Passiflora_coccinea TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATG????????????????? Passiflora_cirrhiflora TCTAATTCTAGAAGAATAATTA------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAACTAAGATGGCCCTGACAACTTAAGTAATATATGA-------------------CTAAGGACATTTT----CAGAAA----GGAGAATAAA-----------AGGAGAATAAAATCACCTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATAT---------------------GGCATAAAAAA-GATATACAGAGAGAAGGATAGTAAAAATAGTACGTTAAAACTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAA-AGAAAA----TATAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAATACTTATTGATTCTTACTTT--CTTATTGATTCTTACTTTTCAATTATCGATTCTAAGGACGTCAAATGATTTAAGGATACCTACATGTTAAAGACAATACGCTC Passiflora_ciliata TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAAAAAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACCTTTT----CAGAAA----GAAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAAAGAGTAMAGACATAGGTGTTAAGTTAT---------------ACTTATATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TATAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAAATAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACG???????? Passiflora_candollei TTTAATTCTAGAATAATAA---------------------------TACAGTACC-GGAAA-AAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTATGA-------------------CTAAGGACATAGT----CAGAAA----GGAGAATAAACGAAGAATAAACGAAGAATAAAAAAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------AGCTATATATATTTAT---------------------GAGATAAAAAA-GATATATGGGGAG--AGATAGTAAAAAGAGTACGTTAAAACTTATGAGCTTCCCA----GTTAATAAAATAAAA---------------------TCAGTTA-AGAAAA----TATAATATATATAT--------CATAAAAAAA--GATGTAA------------GTATAATTAATACTTATTGATTCTT--------------------ACTTTTCAATTATCTATCCTAAGGACGTCA----CCTTAAGGATACCTACATGTTAAAGACAATACACTC Passiflora_candida TCTAAGTCTAGAATAATAA-------------------------------G-ACAGGGAAA--AAAGAAAGTAAAAATAAGATGGCCTTGACAACTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAA----GGAGAATAAA-----------AGGAGAATAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATAT---------------------GGTATAAAAAA-GATATACGGAGAGAAGGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCAGTCAGTTAAGAAAAGAAAA--------------------TTAAGAAA-AGAAAA----TATAATATATATATATAT-AAT---AAAGAAA-AGATGTAA------------GTATAATTAATACTTATTGATTCTT--------------------ACGTTTCAATTATCGATTCTAAGGACGTCAAATGATTTAAGGATACCTACATGTTAAAGACAATACGC?? Passiflora_campanulata TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGAGATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAATAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACGC?? Passiflora_biflora TCTAATTCTAGAATAATAA---------------------------TACAGTAC--GGAAA-AAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTATGA-------------------CTAAGGACATAGT----CAGAAA----GGAGAATAAACGAAGAATAAACGAAGAATAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------AGCTATATATATTTAT---------------------GGGATAAAAAA-GATATATGGAGAGAAGGATAGTAAAAAGAGTACGTTAAAACGTATGAGCTTCCCA----GTTAAGAAAAGAAAA---------------------TCAGTTA-AGAAAA----TATAATATTTATAT--------CATAAAAAAA--GATGTAA------------GTATAATTAATACTTATTGATTCTT--------------------ACTTTTCAATTATCTATCCTAAGGACGTCA----CCTTAAGGATACCTACATGTTAAAGACAATACACT? Passiflora_auriculata TCTAATTCTAGAATAATAA---------------------------TACAGTACA-GGAAA--AAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTATGA-------------------CTAAGGACATAGT----CAGAAA----GGAGAATAAA-----------CGAAGAATAAAATAAACTAAAGAATAGCATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACTTATATATATATAT---------------------GGTATAAAAAAAGATATACGGAGAGAAGGATAGTAAAAAGAGTACGTTAAAAATTATGAGCTTCCCA----GTTAATAAAAGAATA---------------------------------------TATAATATATATC------AATCAGAAAAAAA-AGATATTA------------GTATAATTAATACTTATTGATTCTT--------------------ACTTTT-AATTATCTATCCTAAGGACGTCA----CTTTAAGGATACCTACATCTTAAAGACAATACGCT? Passiflora_aurantia TCTAATTCTAGGATAATAA---------------------------TACAGTACA-GGAAA-AAAAGAAAGTAAAACCAAGATGACCTTGACAATTTAAGTAATCTATGA-------------------CTAAGGACATAGT----CAGAAA----GGAGAATAAACGAAGAATAAA-------AAAAAAAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTATATATATATAT---------------------GGGATAAAAAA-GATATACGGAGAGAAGGATAGTAAAAATAGTACTTTAAAAATTATGAGCTTCCCA----GTTAATAAAAGAAAA--------------------------------------------TATATAT----------CATAAAAAAA-AGATGTAA------------ATATAATTAATACTTATTGATTCTT--------------------ACTTTTCAATTATCTATCCTAAGGACWTCA----CTTTAAGGATACCTACATGTTAAAGACAA?ACG??? Passiflora_antioquiensis YCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTCAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGGATAAAAA-GGATATACGGAGAGGGAGATAGTAAAACTAGTACGTTAAAACTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTGA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATAC????????? Passiflora_andina TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGAC-TTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTCAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGGATAAAAA-GGATATACGGAGAGGGAGATAGTAAAACTAGTACGTTAAAACTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATA----------AAAGAAA-AGATGTGA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACGCT? Passiflora_ampullaceae TCTAATTCTAGAATAATAA---------------------------CACAGTAC-GGGATA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTCAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGGATAAAAA-GGATATACAGAGAGGGAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATATGA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACG??? Passiflora_alata TCTAATTTTAGAATAATAA---------------------------TACAGTAC-GGGAAA-ARAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATTTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAACCTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTATCTTAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTTACCTT---------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATATCTACATGTTAAATACAATACG??? Passiflora_affinis TCTAATTCTAGAATAATAA---------------------------TACAGTACC-GGAAA-AAAAGAAAGTAAAACTAAGATGACCTTGACAATTTAAGTAATCTATGA-------------------CTAAGGACATAGT----CAGAAA----GGAGAATAAA-----------CGAAGAATAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------AGCTATATATATTTAT---------------------GGGATAAAAAA-GATATATGGAGAGAAGGATAGTAAAAAGAGTACGTTAAAGCGTATGAGCTTCCCA----GTTAAGAAAAGAAAA---------------------TCAGTTA-AGAAAA----TATAATATATATAT--------CATAAAAAAA--GATGTAA------------GTATAATTAATACTTATTGATTCTT--------------------ACTTTTCAATTATCTATCCTAAGGACGTCA----CCTTAAGGATACCTACATGTTAAAGACAATACACTC Adenia_sp. TCTAATTCTAGAATAATAATACAATA--AGAATAATAATACAATATTACAGTACGGGGAAA--AAAGAAAGTAAAAATAAGATGGCCTTGACAACTTAAGTAATCTATGACTCAAGACATTATCTATAACTAAGGACATTTTTTTTCAGAAA-------------------------CG-AGAATAAAATAGACTAAAAAATAG-ATAAGAGAAAGTAGAGATAGCAGCTGGCTATAAAGCAGATTAATCTTTAATAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATA-----------------------GTAGAAAAAA-GATATACGGAGAGAAGGATAGTAAAAATACTACGTTAAACCTTATGAGCTTCCCA----GTTAAGG-AAGA-----------------------TTAAGAAA-AGAAAATATATGAAAATTTATAAATTTATAATCTTAAAGAAA-AGATGTAAGTCTAATT---AGTCTAATTAATACTTATTGATTCTTACTTTTACTTATTGATTCTTACTTTTCAATTATCGATTCTAAGGGCGTCAAATGATTTAAGGATACTGACATGTTAAAGACAATAGG??? Passiflora_acuminata TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAATAAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGTACGTTAAACCTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATATAT-AAT---AAAGAAA-AGATGTAA------------GTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGATTTAAGGATACCTACATGTTAAATACAATACGC?? Passiflora_actinia TCTAATTCTAGAATAATAA---------------------------TACAGTAC-GGGAAA-AAAAGAAAGTAAAAAGAAGATGGCCTTGACATCTTAAGTAATCTATGA-------------------CTAAGGACATTTT----CAGAAAGAAAGGAGAATAAA-----------AGGAGAAAAAAATAAACTAAAGAATAG-ATAAGAGAAAGTAGAGATAGCATCTTGGTATAAACCAGATTAGTCTTTACTAAGATAGTAAAGACATAGGTGTTAAGTTAT---------------ACCTACATATATATATCGTATAAAAAAGATATAATATGGTATAAAAA-GGATATACGGAGAGGAAGATAGTAAAACTAGCACGTTAAAACTTATGAGCTTCCCA----GTTAAGAAAAGAAAA--------------------TTAAGAAATAGAAAA----TGTAATATATATATAT---AAT---AAAGAAA-AGATGTAAGTA-AGATGTAAGTATAATTAAGACTTATTGATTCTT--------------------ACTTTTCAATTATCGATTCTAAGAACGTCAAATGTTTTAAGGATACCTACATGTTAAATAGAATACGCT? ; END; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS; TYPESET * UNTITLED (CHARACTERS = 'C: cpDNA, gaps missing, indels scored (LM2335)') = unord: 1 - 631; END; BEGIN CODONS; CODONPOSSET * UNTITLED (CHARACTERS = 'C: cpDNA, gaps missing, indels scored (LM2335)') = N: 1- 631 ; CODONPOSSET CodonPositions (CHARACTERS = 'C: cpDNA, gaps missing, indels scored (LM2335)') = N: 1- 631 ; CODESET * UNTITLED (CHARACTERS = 'C: cpDNA, gaps missing, indels scored (LM2335)') = universal: 1 - 631; END; BEGIN TREES; Title 'C: cpDNA markers, gaps missing, indels scored'; LINK Taxa = Taxa; TRANSLATE 1 Passiflora_vitifolia, 2 Passiflora_villosa, 3 Passiflora_vespertillo, 4 Passiflora_trisecta, 5 Passiflora_trifoliata, 6 Passiflora_trialata, 7 Tetrastylis_ovalis, 8 Tetrapathea_tetranda, 9 Passiflora_speciosa, 10 Passiflora_serratodigitata, 11 Passiflora_seemannii, 12 Passiflora_reflexiflora, 13 Passiflora_racemosa, 14 Passiflora_platyloba, 15 Passiflora_pittieri, 16 Passiflora_perfoliata, 17 Passiflora_parritae, 18 Passiflora_palmeri, 19 Passiflora_oblongata, 20 Passiflora_nitida, 21 Passiflora_murucuja, 22 Passiflora_multiflora, 23 Passiflora_miersii, 24 Passiflora_microstipula100a, 25 Passiflora_microstipula100, 26 Passiflora_microstipula, 27 Passiflora_menispermifolia, 28 Passiflora_manicata, 29 Passiflora_maliformis, 30 Passiflora_magnifica, 31 Passiflora_ligularis, 32 Passiflora_laurifolia, 33 Passiflora_lancitillensis, 34 Passiflora_kawensis, 35 Passiflora_holosericea, 36 Passiflora_herbertiana, 37 Passiflora_guatemalensis, 38 Passiflora_glandulosa, 39 Passiflora_garkei, 40 Passiflora_edulisinter, 41 Passiflora_dilkea, 42 Passiflora_deidamioides, 43 Passiflora_cumbalensis, 44 Passiflora_crenata, 45 Passiflora_coccinea, 46 Passiflora_cirrhiflora, 47 Passiflora_ciliata, 48 Passiflora_candollei, 49 Passiflora_candida, 50 Passiflora_campanulata, 51 Passiflora_biflora, 52 Passiflora_auriculata, 53 Passiflora_aurantia, 54 Passiflora_antioquiensis, 55 Passiflora_andina, 56 Passiflora_ampullaceae, 57 Passiflora_alata, 58 Passiflora_affinis, 59 Adenia_sp., 60 Passiflora_acuminata, 61 Passiflora_actinia; TREE Fig._C = ((((((((((((((((57,6),(20,25,26),40),(5,4)),12),13),((((39,27),23),50),2)),((((30,31),(10,(11,29))),14),((1,(38,61)),(((55,54),56,17),(43,28))))),(32,(44,60))),45),9),(18,47)),((15,34),49)),(41,8)),((7,42),46)),((24,33),(((35,(52,(36,53))),(((16,(48,3),19,51,21),58),22)),37))),59); END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED (CHARACTERS = 'C: cpDNA, gaps missing, indels scored (LM2335)') = 'Jukes-Cantor': 1 - 631; END;