#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=51; TAXLABELS Phoma_sclerotioides_var_champlainii_Chz1x7r Phoma_sclerotioides_var_champlainii_Chz1x15r Phoma_sclerotioides_var_steubenii_Chz1x16r Phoma_sclerotioides_var_steubenii_All_Isolates_of_steubenii Phoma_sclerotioides_var_steubenii_Stb1x1x1x4r Phoma_sclerotioides_var_viridis_Chz1x30r Phoma_sclerotioides_var_sclerotioides_Chz2x14cr Phoma_sclerotioides_var_sclerotioides_All_isolates_of_sclerotioides Phoma_sclerotioides_var_sclerotioides_Chz7x2r Phoma_sclerotioides_var_sclerotioides_MT1x3x4_etc Phoma_sclerotioides_var_macrospora_Chz7x25cr Phoma_sclerotioides_var_steubenii_Chz10x18r Phoma_sclerotioides_var_steubenii_Chz12x30r Phoma_sclerotioides_var_viridis_Chz12x22r Phoma_sclerotioides_var_viridis_Chz21x19cr_etc Phoma_sclerotioides_var_viridis_Chz17x19Cr Phoma_sclerotioides_var_viridis_All_Isolates_of_viridis Phoma_sclerotioides_var_Chz23x18r Phoma_sclerotioides_var_macrospora_ME1x2x8cr Phoma_sclerotioides_var_macrospora_All_Isolates_of_macrospora Phoma_sclerotioides_var_sclerotioides_ME3x1x7r Phoma_sclerotioides_var_sclerotioides_ME3x4x15cr Phoma_sclerotioides_var_steubenii_ME3x4x16cr Phoma_sclerotioides_var_steubenii_ME4x3x5r_etc Phoma_sclerotioides_var_obscurus_CO7x2x10a Phoma_sclerotioides_var_obscurus_MT1x4x2 Phoma_sclerotioides_var_obscurus_All_Isolates_of_obscurus Phoma_sclerotioides_var_saskatchewanii_MT2x1x3 Phoma_sclerotioides_var_saskatchewanii_SK7x34_SK7x9 Phoma_sclerotioides_var_viridis_MT3x1x2 Phoma_sclerotioides_var_viridis_MT3x3x2a Phoma_sclerotioides_var_sclerotioides_MT4x2x1 Phoma_sclerotioides_var_viridis_MT4x2x7 Phoma_sclerotioides_var_viridis_MT6x2x6 Phoma_sclerotioides_var_obscurus_MT6x5x10 Phoma_sclerotioides_var_viridis_NH4x2x3x8r Phoma_sclerotioides_var_viridis_ON3x7 Phoma_sclerotioides_var_viridis_Q4x12st Phoma_sclerotioides_var_viridis_Q5x21st Phoma_sclerotioides_var_steubenii_NY1x2 Phoma_sclerotioides_var_macrospora_Wyo18x1r Phoma_sclerotioides_var_sclerotioides_SK2x1 Phoma_sclerotioides_var_sclerotioides_SK2x11_etc Phoma_sclerotioides_var_saskatchewanii_SK2x2 Phoma_sclerotioides_var_saskatchewanii_SK3x1_etc Phoma_sclerotioides_var_sclerotioides_SK6x2 Phoma_sclerotioides_var_viridis_SK6x12 Phoma_sclerotioides_SK7x12 Phoma_sclerotioides_var_champlainii_VT3x2x1x7r Phoma_sclerotioides_var_MNxJNLx1a Phoma_medicaginis_Pmed1NY ; END; BEGIN CHARACTERS; TITLE HISchar; DIMENSIONS NCHAR=516; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Phoma_sclerotioides_var_champlainii_Chz1x7r GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTC-----GTCGTCGCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACATTCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_champlainii_Chz1x15r GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTC-----GTCGTCGCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACATTCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_steubenii_Chz1x16r GCCTGCATCTCG---TCGCATGTCGC-TGTTGCCACC---GACATGCGCCCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CGTCCACCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_steubenii_All_Isolates_of_steubenii GCCTGCATCTCG---TCGCATGTCGC-TGTTGCCACC---GACATGCGCCCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CGTCCACCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_steubenii_Stb1x1x1x4r GCCTGCATCTCG---TCGCATGTCGC-TGTTGCCACC---GACATGCGCCCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CGTCCACCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_Chz1x30r GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCTACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCTTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_Chz2x14cr GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTC------GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACCGCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_All_isolates_of_sclerotioides GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTC------GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACCGCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_Chz7x2r GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTT-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATTCGTACGTCT---CTTCCACCAACTACA-GTCGACTA-TAGCTAACACATCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_MT1x3x4_etc GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTT-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATTCGTACGTCT---CTTCCACCAACTACA-GTCGACTA-TAGCTAACACATCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_macrospora_Chz7x25cr GCCTGCATCTCG---TCGCTCGTCGC-TGTTGCCACC---GACATGCGTGCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---ACAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCACTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAGCCACA-GCCGACCA-TAGCTAACACATCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_steubenii_Chz10x18r GCCTGCATCTCG---TCGCATGTCGC-TGTTGCCACC---GACATGCGCCCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACACACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CGTCCACCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_steubenii_Chz12x30r GCCTGCATCTCG---TCGCATGTCGC-TGTTGCCACC---GACATGCGCCCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACACACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CGTCCACCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_Chz12x22r GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GTAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_Chz21x19cr_etc GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GTAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_Chz17x19Cr GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTTCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_All_Isolates_of_viridis GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTTCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_Chz23x18r GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACTACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_macrospora_ME1x2x8cr GCCTGCATCTCG---TCGCTCGTCGC-TGTTGCCACC---GACATGCGTGCTCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCACTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAGCCACA-GCCGACCA-TAGCTAACACATCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_macrospora_All_Isolates_of_macrospora GCCTGCATCTCG---TCGCTCGTCGC-TGTTGCCACC---GACATGCGTGCTCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCACTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAGCCACA-GCCGACCA-TAGCTAACACATCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_ME3x1x7r GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTC------GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACCGCCACAGAGTCTAAGGATATCC Phoma_sclerotioides_var_sclerotioides_ME3x4x15cr GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTC------GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACCGCCACAGAGTCTAAGGATATCC Phoma_sclerotioides_var_steubenii_ME3x4x16cr GCCTGCATCTCG---TCGCACGTCGC-TGTCGCCACC---GACATGCCTGCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCCACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_steubenii_ME4x3x5r_etc GCCTGCATCTCG---TCGCACGTCGC-TGTCGCCACC---GACATGCCTGCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCCACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_obscurus_CO7x2x10a GCCTGCATCTCG---TCGCACGCCGC-TGTCGCCGCC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_obscurus_MT1x4x2 GCCTGCATCTCG---TCGCACGCCGC-TGTCGCCGCC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACTGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_obscurus_All_Isolates_of_obscurus GCCTGCATCTCG---TCGCACGCCGC-TGTCGCCGCC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACTGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_saskatchewanii_MT2x1x3 GCCTGCATCTCG---TCGCACGTCGC-TGTTGCCACC---GACATGCGTGCGCCGCTGCATCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACCGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCTCAGGACTTCAAATCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCTAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GTCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_saskatchewanii_SK7x34_SK7x9 GCCTGCATCTCG---TCGCACGTCGC-TGTTGCCACC---GACATGCGTGCGCCGCTGCATCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACCGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCTCAGGACTTCAAATCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCTAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GTCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_MT3x1x2 GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGACCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTTCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_MT3x3x2a GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GCC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_MT4x2x1 GCCTGCATCTCG---TCGCACGTCGT-TGTCGCCACC---GAC------------------------TCTTT-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATTCGTACGTCT---CTTCCACCAACTACA-GTCGACTA-TAGCTAACACATCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_MT4x2x7 GCCTGCATCTT------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_MT6x2x6 GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_obscurus_MT6x5x10 GCCTGCATCTCG---TCGCACGCCGC-TGTCGCCGCC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACCA-TAGCTAACACCTCCACAGAATCCAAGGATATCC Phoma_sclerotioides_var_viridis_NH4x2x3x8r GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTC------GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACCGCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_ON3x7 GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTTCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGATACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_Q4x12st GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTTCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGATACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_Q5x21st GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTTCAGGAGTCTGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_steubenii_NY1x2 GCCTGCATCTCG---TCGCATGTCGC-TGTTGCCACC---GACATGCGCCCGCCGCTGCACCTTGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CGTCCACCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_macrospora_Wyo18x1r GCCTGCATCTCG---TCGCTCGTCGC-TGTTGCCACC---GACATGCGTGCGCCGCTGCACCTCGCATCTTC-----GTC---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGCCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCACTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAGCCACA-GCCGACCA-TAGCTAACACATCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_SK2x1 GCCTGCATCTCC---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAAC-CATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACC-GTCGACTA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_SK2x11_etc GCCTGCATCTCC---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAAC-CATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACC-GTCGACTA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_saskatchewanii_SK2x2 GCCTGCATCTCG---TCGCACGTCGC-TGTTGCCACC---GACATGCGTGCGCCGCTGCATCTCGCATCTTC-----GTT---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACCGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCTCAGGACTTCAAATCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCTAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GTCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_saskatchewanii_SK3x1_etc GCCTGCATCTCG---TCGCACGTCGC-TGTTGCCACC---GACATGCGTGCGCCGCTGCATCTCGCATCTTC-----GTT---GCAACCCACCACTAACGCCCT---GCAGGCAAGTCCACCGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCTCAGGACTTCAAATCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCTAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GTCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_sclerotioides_SK6x2 GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTT-----GTC---GCAACTCATCAGTAACTTCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACCA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_viridis_SK6x12 GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GTAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACTGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTTGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACCA-TAGCTAACACCTCCACAGAGTCCAAGGATATCC Phoma_sclerotioides_SK7x12 GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACATCAACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_champlainii_VT3x2x1x7r GCCTGCATCTCG---TCGCACGCCGT-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCTTCCAAGGCCGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCATCGCTACAAGCCCGGAACCGTCGCCCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTTCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTCCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATTCGTACGTCT---CTTCCACCAACCACA-GTCGACTA-TAGCTAACACATTCACAGAGTCCAAGGATATCC Phoma_sclerotioides_var_MNxJNLx1a GCCTGCATCTC------GCACGCTGC-TGTCGCCACC---GAC------------------------TCTTC-----GTC---GCAACCCATCACTAACGCCCT---GCAGGCAAGTCCACGGGTGGCAAAGCCCCCCGCAAGCAGCTCGCCTCCAAGGCTGCGCGCAAGTCCGCGCCGTCCACCGGAGGTGTCAAGAAGCCCCACCGCTACAAGCCCGGAACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGCCTTGTCCGTGAGATCGCCCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGAGCCCTTCAGGAGTCCGTCGAGGCCTACCTCGTCTCGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATTCGTACGTCT---CTTCCATCAACCACA-GCCGACAA-TAGCTAACACCACCACAGAGTCCAAGGATATCC Phoma_medicaginis_Pmed1NY GCCTTGGTGTTGCCGTCGCAGTCTGCCTGCCGCCACCTCTGGCACGACCGCGTCTCTGCGCATTACCTCATCACACCCTCACCTCCACACTCGACTAACACACTACTGCAGGTAAGTCCACTGGTGGCAAGGCTCCCCGTAAGCAGCTCGCCTCCAAGGCCGCTCGCAAGTCTGCACCATCAACCGGTGGTGTCAAGAAGCCTCACCGCTACAAGCCTGGTACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCGACCGAGCTCCTCATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAGATCGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCTGCCATCGGCGCCCTTCAGGAGTCGGTCGAGGCCTACCTCGTCTCCCTGTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATCCGTACGTCCTACCTTGACTTGATCTCATGATGATCACTCGCTAAC-TGTCTGCAGAGTCCAAGGATATCC ; END; BEGIN TREES; Title 'HISchar: 1 of 23027 MP trees, histone sequence data of Phoma sclerotioides'; LINK Taxa = Taxa; TRANSLATE 1 Phoma_sclerotioides_var_champlainii_Chz1x7r, 2 Phoma_sclerotioides_var_champlainii_Chz1x15r, 3 Phoma_sclerotioides_var_steubenii_Chz1x16r, 4 Phoma_sclerotioides_var_steubenii_All_Isolates_of_steubenii, 5 Phoma_sclerotioides_var_steubenii_Stb1x1x1x4r, 6 Phoma_sclerotioides_var_viridis_Chz1x30r, 7 Phoma_sclerotioides_var_sclerotioides_Chz2x14cr, 8 Phoma_sclerotioides_var_sclerotioides_All_isolates_of_sclerotioides, 9 Phoma_sclerotioides_var_sclerotioides_Chz7x2r, 10 Phoma_sclerotioides_var_sclerotioides_MT1x3x4_etc, 11 Phoma_sclerotioides_var_macrospora_Chz7x25cr, 12 Phoma_sclerotioides_var_steubenii_Chz10x18r, 13 Phoma_sclerotioides_var_steubenii_Chz12x30r, 14 Phoma_sclerotioides_var_viridis_Chz12x22r, 15 Phoma_sclerotioides_var_viridis_Chz21x19cr_etc, 16 Phoma_sclerotioides_var_viridis_Chz17x19Cr, 17 Phoma_sclerotioides_var_viridis_All_Isolates_of_viridis, 18 Phoma_sclerotioides_var_Chz23x18r, 19 Phoma_sclerotioides_var_macrospora_ME1x2x8cr, 20 Phoma_sclerotioides_var_macrospora_All_Isolates_of_macrospora, 21 Phoma_sclerotioides_var_sclerotioides_ME3x1x7r, 22 Phoma_sclerotioides_var_sclerotioides_ME3x4x15cr, 23 Phoma_sclerotioides_var_steubenii_ME3x4x16cr, 24 Phoma_sclerotioides_var_steubenii_ME4x3x5r_etc, 25 Phoma_sclerotioides_var_obscurus_CO7x2x10a, 26 Phoma_sclerotioides_var_obscurus_MT1x4x2, 27 Phoma_sclerotioides_var_obscurus_All_Isolates_of_obscurus, 28 Phoma_sclerotioides_var_saskatchewanii_MT2x1x3, 29 Phoma_sclerotioides_var_saskatchewanii_SK7x34_SK7x9, 30 Phoma_sclerotioides_var_viridis_MT3x1x2, 31 Phoma_sclerotioides_var_viridis_MT3x3x2a, 32 Phoma_sclerotioides_var_sclerotioides_MT4x2x1, 33 Phoma_sclerotioides_var_viridis_MT4x2x7, 34 Phoma_sclerotioides_var_viridis_MT6x2x6, 35 Phoma_sclerotioides_var_obscurus_MT6x5x10, 36 Phoma_sclerotioides_var_viridis_NH4x2x3x8r, 37 Phoma_sclerotioides_var_viridis_ON3x7, 38 Phoma_sclerotioides_var_viridis_Q4x12st, 39 Phoma_sclerotioides_var_viridis_Q5x21st, 40 Phoma_sclerotioides_var_steubenii_NY1x2, 41 Phoma_sclerotioides_var_macrospora_Wyo18x1r, 42 Phoma_sclerotioides_var_sclerotioides_SK2x1, 43 Phoma_sclerotioides_var_sclerotioides_SK2x11_etc, 44 Phoma_sclerotioides_var_saskatchewanii_SK2x2, 45 Phoma_sclerotioides_var_saskatchewanii_SK3x1_etc, 46 Phoma_sclerotioides_var_sclerotioides_SK6x2, 47 Phoma_sclerotioides_var_viridis_SK6x12, 48 Phoma_sclerotioides_SK7x12, 49 Phoma_sclerotioides_var_champlainii_VT3x2x1x7r, 50 Phoma_sclerotioides_var_MNxJNLx1a, 51 Phoma_medicaginis_Pmed1NY; TREE PAUP_23027 = (((((((((1:4.0,49:1.0):1.0,(9:0.0,32:1.0):3.0):1.0,48:4.0):0.0,(7:0.0,21:1.0,36:0.0):2.0):1.0,42:3.0):2.0,46:8.0):4.0,(25:0.0,26:1.0,35:1.0):6.0):4.0,(((3:0.0,12:1.0,40:1.0):5.0,((11:1.0,19:1.0,41:2.0):5.0,(28:0.0,44:1.0):7.0):1.0):2.0,23:1.0):10.0):1.0,(((6:2.0,18:1.0):0.0,(((14:0.0,47:2.0):1.0,(31:1.0,33:1.0):1.0,34:0.0):2.0,37:2.0):1.0):0.0,(16:0.0,30:1.0,39:1.0,50:1.0):1.0):3.0,51:62.0); END; BEGIN TREES; Title 'HISchar: Best ML tree, histone sequence data of Phoma sclerotioides'; LINK Taxa = Taxa; TRANSLATE 1 Phoma_sclerotioides_var_champlainii_Chz1x7r, 2 Phoma_sclerotioides_var_champlainii_Chz1x15r, 3 Phoma_sclerotioides_var_steubenii_Chz1x16r, 4 Phoma_sclerotioides_var_steubenii_All_Isolates_of_steubenii, 5 Phoma_sclerotioides_var_steubenii_Stb1x1x1x4r, 6 Phoma_sclerotioides_var_viridis_Chz1x30r, 7 Phoma_sclerotioides_var_sclerotioides_Chz2x14cr, 8 Phoma_sclerotioides_var_sclerotioides_All_isolates_of_sclerotioides, 9 Phoma_sclerotioides_var_sclerotioides_Chz7x2r, 10 Phoma_sclerotioides_var_sclerotioides_MT1x3x4_etc, 11 Phoma_sclerotioides_var_macrospora_Chz7x25cr, 12 Phoma_sclerotioides_var_steubenii_Chz10x18r, 13 Phoma_sclerotioides_var_steubenii_Chz12x30r, 14 Phoma_sclerotioides_var_viridis_Chz12x22r, 15 Phoma_sclerotioides_var_viridis_Chz21x19cr_etc, 16 Phoma_sclerotioides_var_viridis_Chz17x19Cr, 17 Phoma_sclerotioides_var_viridis_All_Isolates_of_viridis, 18 Phoma_sclerotioides_var_Chz23x18r, 19 Phoma_sclerotioides_var_macrospora_ME1x2x8cr, 20 Phoma_sclerotioides_var_macrospora_All_Isolates_of_macrospora, 21 Phoma_sclerotioides_var_sclerotioides_ME3x1x7r, 22 Phoma_sclerotioides_var_sclerotioides_ME3x4x15cr, 23 Phoma_sclerotioides_var_steubenii_ME3x4x16cr, 24 Phoma_sclerotioides_var_steubenii_ME4x3x5r_etc, 25 Phoma_sclerotioides_var_obscurus_CO7x2x10a, 26 Phoma_sclerotioides_var_obscurus_MT1x4x2, 27 Phoma_sclerotioides_var_obscurus_All_Isolates_of_obscurus, 28 Phoma_sclerotioides_var_saskatchewanii_MT2x1x3, 29 Phoma_sclerotioides_var_saskatchewanii_SK7x34_SK7x9, 30 Phoma_sclerotioides_var_viridis_MT3x1x2, 31 Phoma_sclerotioides_var_viridis_MT3x3x2a, 32 Phoma_sclerotioides_var_sclerotioides_MT4x2x1, 33 Phoma_sclerotioides_var_viridis_MT4x2x7, 34 Phoma_sclerotioides_var_viridis_MT6x2x6, 35 Phoma_sclerotioides_var_obscurus_MT6x5x10, 36 Phoma_sclerotioides_var_viridis_NH4x2x3x8r, 37 Phoma_sclerotioides_var_viridis_ON3x7, 38 Phoma_sclerotioides_var_viridis_Q4x12st, 39 Phoma_sclerotioides_var_viridis_Q5x21st, 40 Phoma_sclerotioides_var_steubenii_NY1x2, 41 Phoma_sclerotioides_var_macrospora_Wyo18x1r, 42 Phoma_sclerotioides_var_sclerotioides_SK2x1, 43 Phoma_sclerotioides_var_sclerotioides_SK2x11_etc, 44 Phoma_sclerotioides_var_saskatchewanii_SK2x2, 45 Phoma_sclerotioides_var_saskatchewanii_SK3x1_etc, 46 Phoma_sclerotioides_var_sclerotioides_SK6x2, 47 Phoma_sclerotioides_var_viridis_SK6x12, 48 Phoma_sclerotioides_SK7x12, 49 Phoma_sclerotioides_var_champlainii_VT3x2x1x7r, 50 Phoma_sclerotioides_var_MNxJNLx1a, 51 Phoma_medicaginis_Pmed1NY; TREE ML = (51:0.37206847,(31:0.00250523,(((((((16:1.0E-8,(17:1.0E-8,(50:0.00257122,(39:0.00253621,(37:1.0E-8,38:1.0E-8):0.00510585):1.0E-8):1.0E-8):1.0E-8):1.0E-8,30:0.00255022):0.00256829,6:0.00515367):1.0E-8,18:0.00256484):0.00781732,(15:1.0E-8,14:1.0E-8):0.00252693):1.0E-8,34:1.0E-8):0.00254578,(47:0.00500306,((((26:1.0E-8,27:1.0E-8):0.00249195,(35:0.0024999,25:1.0E-8):1.0E-8):0.00319654,(46:0.01678581,((((2:1.0E-8,1:1.0E-8):1.0E-8,(((10:1.0E-8,9:1.0E-8):1.0E-8,32:0.00244453):0.00752236,49:1.0E-8):0.00246381):0.00236639,48:0.00784788):0.00265115,((43:1.0E-8,42:1.0E-8):0.00505169,((22:1.0E-8,21:1.0E-8):0.00252899,((8:1.0E-8,7:1.0E-8):1.0E-8,36:1.0E-8):1.0E-8):0.00513827):1.0E-8):0.00183973):0.00792048):0.00486212,((23:1.0E-8,24:1.0E-8):0.00328943,((((11:0.00225855,41:0.00447044):1.0E-8,(19:1.0E-8,20:1.0E-8):0.00226255):0.01275879,((45:1.0E-8,44:1.0E-8):0.00216038,(29:1.0E-8,28:1.0E-8):1.0E-8):0.01731237):0.00135712,(40:0.00225178,(((4:1.0E-8,3:1.0E-8):1.0E-8,5:1.0E-8):1.0E-8,(12:1.0E-8,13:1.0E-8):0.00228089):1.0E-8):0.01213778):0.00454052):0.01082109):0.01492516):1.0E-8):1.0E-8):0.00254495,33:1.0E-8); END;