#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=46; TAXLABELS Phoma_sclerotioides_var_champlainii_Chz_1x15r_etc Phoma_sclerotioides_var_champlainii_Vt3x2x1x7r Phoma_sclerotioides_var_viridis_Chz1x30r Phoma_sclerotioides_var_viridis_All_isolates_viridis Phoma_sclerotioides_var_sclerotioides_Chz2x14cr Phoma_sclerotioides_var_sclerotioides_All_isolates_sclerotioides Phoma_sclerotioides_var_sclerotioides_Chz7x2r_etc Phoma_sclerotioides_var_sclerotioides_MT1x3x4 Phoma_sclerotioides_var_macrospora_Chz7x25cr_etc Phoma_sclerotioides_var_macrospora_ON5x6 Phoma_sclerotioides_var_steubenii_Chz10x18r_etc Phoma_sclerotioides_var_steubenii_Chz5x32r Phoma_sclerotioides_var_steubenii_Chz12x30r Phoma_sclerotioides_var_steubenii_All_isolates_steubenii Phoma_sclerotioides_var_viridis_Chz17x19Cr Phoma_sclerotioides_var_viridis_NH4x2x3x5r Phoma_sclerotioides_var_viridis_Chz23x18r Phoma_sclerotioides_var_viridis_ME4x1x9st Phoma_sclerotioides_var_macrospora_ME1x2x8cr Phoma_sclerotioides_var_sclerotioides_ME1x3x8st Phoma_sclerotioides_var_macrospora_ME2x8st Phoma_sclerotioides_var_macrospora_ME5x2x5r_etc Phoma_sclerotioides_var_sclerotioides_ME3x1x7r Phoma_sclerotioides_var_sclerotioides_ME3x4x15cr_etc Phoma_sclerotioides_var_steubenii_ME3x4x16cr Phoma_sclerotioides_var_obscurus_CO7x2x10a Phoma_sclerotioides_var_obscurus_MT4x4x12_etc Phoma_sclerotioides_var_saskatchewanii_MT2x1x3 Phoma_sclerotioides_var_saskatchewanii_SK3x1_etc Phoma_sclerotioides_var_sclerotioides_MT2x2x11 Phoma_sclerotioides_var_sclerotioides_ON4x21_etc Phoma_sclerotioides_var_viridis_MT3x3x2a Phoma_sclerotioides_var_sclerotioides_MT3x4x8 Phoma_sclerotioides_var_sclerotioides_MT4x2x1 Phoma_sclerotioides_var_viridis_MT4x2x7 Phoma_sclerotioides_var_sclerotioides_MT4x4x4 Phoma_sclerotioides_var_viridis_NH4x2x3x8r Phoma_sclerotioides_var_sclerotioides_SK2x1 Phoma_sclerotioides_var_sclerotioides_SK2x11_etc Phoma_sclerotioides_var_saskatchewanii_SK2x2 Phoma_sclerotioides_var_sclerotioides_SK4x1_etc Phoma_sclerotioides_var_sclerotioides_SK7x10 Phoma_sclerotioides_var_sclerotioides_SK6x2 Phoma_sclerotioides_SK7x12 Phoma_sclerotioides_var_viridis_VT3x2x4x1r Phoma_medicaginis_Pmed1NY ; END; BEGIN CHARACTERS; TITLE EFchar; DIMENSIONS NCHAR=478; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Phoma_sclerotioides_var_champlainii_Chz_1x15r_etc AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACAATGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTCGGAGACCCGCGGCGTTCTGATGCGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTACGCTCCATGCGCC------TCACTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_champlainii_Vt3x2x1x7r AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACAATGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTCGGAGACCCGCGGCGTTCTGATGCGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTACGCTCCATGCGCC------TCACTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_viridis_Chz1x30r AGCCCTCCTCGCCCGTCGAACGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTCCTTTACATGGAGACCCGCGGCGTTCCGATGTGCCCTCTGGGTG--TCGCCGTCGCC---GGCTTATTG--CAAAGAGGGGCATTTTTTCGCTGGTGGG--GTGTGCGAGCATTT-GTGCGCTAGCGCTAGGCCCGATACGGGTTTCGCGGGCTGCGACAA--TGCTCCCTCACCTATGCTCCATGCGCC------TCTCTTCACGCGCCT--CT-CTCCACGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_viridis_All_isolates_viridis AGCCCTCCTCGCCCGTCGAACGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTCCTTTACATGGAGACCCGCGGCGTTCCGATGTGCCCTCTGGGTG--TCGCCGTCGCC---GGCTTATTG--CAAAGAGGGGCATTTTTTCGCTGGTGGG--GTGTGCGAGCATTT-GTGCGCTAGCGCTAGGCCCGATACGGGTTTCGCGGGCTGCGACAA--TGCTCCCTCACCTATGCTCCATGCGCC------TCTCTTCACGCGCCT--CT-CTCCACGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_Chz2x14cr AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTTAGACGCGCCCTCTGAGTG--CCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTTCATGCGCC------TCGCTTCTCGCGCCTCGCT-CCTCGGACATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_All_isolates_sclerotioides AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTTAGACGCGCCCTCTGAGTG--CCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTTCATGCGCC------TCGCTTCTCGCGCCTCGCT-CCTCGGACATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_Chz7x2r_etc AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTTCGATGCGCCCTCTGAGTG--TCGCCATCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTCCATGCGCC------TCGCTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-TAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_MT1x3x4 AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTTCGATGCGCCCTCTGAGTG--TCGCCATCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTCCATGCGCC------TCGCTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-TAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_macrospora_Chz7x25cr_etc AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTCCGATGCGCCCTCTGAGTG--TCGCCGTTGCC---GGCTTATCG--CAAAGAGGGGCATTTTT-CGCTGGTGGG--GTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAGCTGCGACAA-ATGCTCCCTCACCTACGCTCCATGCGCC------TCGCTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_macrospora_ON5x6 AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTCCGATGCGCCCTCTGAGTG--TCGCCGTTGCC---GGCTTATCG--CAAAGAGGGGCATTTTT-CGCTGGTGGG--GTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAGCTGCGACAA-ATGCTCCCTCACCTACGCTCCATGCGCC------TCGCTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_steubenii_Chz10x18r_etc AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTCCGATGCGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTT-CGCTGGTGGG--GTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGTTTCGCGAGCTGCGACAA-ATGCTCCCTCACCTGCGCTCCATGCGCC------TCGCTTCTCA---------------GACATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_steubenii_Chz5x32r AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTCCGATGCGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTT-CGCTGGTGGG--GTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGTTTCGCGAGCTGCGACAA-ATGCTCCCTCACCTGCGCTCCATGCGCC------TCGCTTCTCA---------------GACATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_steubenii_Chz12x30r AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTCCGATGCGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTT-CGCTGGTGGG--GTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAGCTGCGACAA-ATGCTCCCTCACCTGCGCTCCATGCGCC------TCGCTTCTCA---------------GACATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_steubenii_All_isolates_steubenii AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTCCGATGCGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTT-CGCTGGTGGG--GTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAGCTGCGACAA-ATGCTCCCTCACCTGCGCTCCATGCGCC------TCGCTTCTCA---------------GACATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_viridis_Chz17x19Cr AGCCCTCCTCGCCCGTCGAACGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTCCTTTACATGGAGACCCGCGGCGTTCCGATGTGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTTTCGCTGGTGGG--GTGTGCGAATTTTC-GCGTGTCAGCGCTAGGCCCGATGCGGGTTTAGCGAGCTGCGACAA--TGCACCCTCACCTATGTTCCATGCGCC------TCTCTCCACGCGCCT--CT-CTCCACGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTTGG-CAAGGGTT-------CCTTCAAGTACGCCTGGGTCCTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_viridis_NH4x2x3x5r AGCCCTCCTCGCCCGTCGAACGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTCCTTTACATGGAGACCCGCGGCGTTCCGATGTGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTTTCGCTGGTGGG--GTGTGCGAATTTTC-GCGTGTCAGCGCTAGGCCCGATGCGGGTTTAGCGAGCTGCGACAA--TGCACCCTCACCTATGTTCCATGCGCC------TCTCTCCACGCGCCT--CT-CTCCACGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTTGG-CAAGGGTT-------CCTTCAAGTACGCCTGGGTCCTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_viridis_Chz23x18r AGCCCTCCTCGCCCGTCGAACGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTCCTTTACATGGAGACCCGCGGCGTTCCGATGTGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTTTCGCTGGTGGG--GTATGCGAGCATTT-GTGCGCTAGCGCTAGGCCCGATACGGGTTTCGCGAGCTGCGACAA--TGCTCCCTCACCTGCGCTCCATGCGCC------TCTCTTCTCA---------------GGCATATGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_viridis_ME4x1x9st AGCCCTCCTCGCCCGTCGAACGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTCCTTTACATGGAGACCCGCGGCGTTCCGATGTGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTTTCGCTGGTGGG--GTATGCGAGCATTT-GTGCGCTAGCGCTAGGCCCGATACGGGTTTCGCGAGCTGCGACAA--TGCTCCCTCACCTGCGCTCCATGCGCC------TCTCTTCTCA---------------GGCATATGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_macrospora_ME1x2x8cr AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTCCGATGCGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTT-CGCTGGTGGG--GTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAGCTGCGACAA-ATGCTCCCTCACCTACGCTCCATGCGCC------TCGCTTCTCA---------------GGCATGTGCTG--ACAGTCTTT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_ME1x3x8st AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTTCTTCCTTGGAGACCCGCGGCGTTTAGACGCGCCCTCTGAGTG--CCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTTCATGCGCC------TCGCTTCTCGCGCCTCGCT-CCTCGGACATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CTTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_macrospora_ME2x8st AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTCCGATGCGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTT-CGCTGGTGGG--GTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAGCTGCGACAA-ATGCTCCCTCACCTACGCTCCATGCGCC------TCGCTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_macrospora_ME5x2x5r_etc AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTCCGATGCGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTT-CGCTGGTGGG--GTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAGCTGCGACAA-ATGCTCCCTCACCTACGCTCCATGCGCC------TCGCTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_ME3x1x7r AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTTCTTCCTTGGAGACCCGCGGCGTTTAGACGCGCCCTCTGAGTG--CCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTTCATGCGCC------TCGCTTCTCGCGCCTCGCT-CCTCGGACATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_ME3x4x15cr_etc AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTTCTTCCTTGGAGACCCGCGGCGTTTAGACGCGCCCTCTGAGTG--CCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTTCATGCGCC------TCGCTTCTCGCGCCTCGCT-CCTCGGACATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_steubenii_ME3x4x16cr AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTCCGATGCGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTT-CGCTGGTGGG--GTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAGCTGCGACAA--TGCTCCCTCACCTGCGCTCTATGCGCC------TCGCTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_obscurus_CO7x2x10a AGCCCTCCTCGCCCGTCGAACGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCAGCGTTCCCATGCGCCCTCTGAGTG--TTGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTTTCGCTGGTGGG--GTGTGCGAGCATTT-GTGCGCTAGCGCTAGGCCCGATACGGGTTTCGCGAGCTGCGACAA--TGCTCCCTCACCTGCGCTCCATGCGCC------TCGCTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_obscurus_MT4x4x12_etc AGCCCTCCTCGCCCGTCGAACGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCAGCGTTCCCATGCGCCCTCTGAGTG--TTGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTTTCGCTGGTGGG--GTGTGCGAGCATTT-GTGCGCTAGCGCTAGGCCCGATACGGGTTTCGCGAGCTGCGACAA--TGCTCCCTCACCTGCGCTCCATGCGCC------TCGCTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_saskatchewanii_MT2x1x3 AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTCCGATGCGCCCTCTGAGTG--TCGCCGTCACC---GGCTTATCG--CAAAGAGGGGCATTTTT-CGCTGGTGGG--GTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAGCTGCGACAA--TGCTCCCTCACCTGCGCTCTATGCGCC------TCGCTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_saskatchewanii_SK3x1_etc AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTCCGATGCGCCCTCTGAGTG--TCGCCGTCACC---GGCTTATCG--CAAAGAGGGGCATTTTT-CGCTGGTGGG--GTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAGCTGCGACAA--TGCTCCCTCACCTGCGCTCTATGCGCC------TCGCTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_MT2x2x11 AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTTAGATGCGCCCTCTGAGTG--CCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTTCATGCGCC------TCGCTTCTCGCGCCTCGCT-CCTCGGACATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_ON4x21_etc AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTTAGATGCGCCCTCTGAGTG--CCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTTCATGCGCC------TCGCTTCTCGCGCCTCGCT-CCTCGGACATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_viridis_MT3x3x2a AGCCCTCCTCGCCCGTCGAACGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTCCCTTTACATGGAGACCCGCGGCGTTCCGATGTGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTTTCGCTGGTGGG--GTGTGCGAGCATTT-GTGCGCTAGCGCTAGGCCCGATACGGGTTTCGCGGGCTGCGACAA--TGCTCCCTCACCTATGCTTCCTCACCT------GCGCTCCATGCGCCT--CT-CTCCACGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_MT3x4x8 AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATTTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTTCGATGCGCCCTCTGAGTG--TCGCCGTCGCC---GGTTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTCCATGCGCC------TCGCTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_MT4x2x1 AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTTCGATGCGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGTGCTCCATGCGCC------TCACTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_viridis_MT4x2x7 AGCCCTCCTCGCCCGTCGAACGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTCCTTTACATGGAGACCCGCGGCGTTCCGATGTGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTTTCGCTGGTGGG--GTGTGCGAGCATTT-GTGCGCTAGCGCTAGGCCCAATACGGGTTTCGCGGGCTGCGACAA--TGCTCCCTCACCTATGCTTCCTCACCT------GCGCTCCATGCGCCT--CT-CTTCACGCATGTGCTA--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_MT4x4x4 AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCCTGGAGACCCGCGGCGTTTAGATGCGCCCTCTGAGTG--CCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACGTTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTCCATGCGCC------TCGCTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_viridis_NH4x2x3x8r AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTTAGACGCGCCCTCTGAGTG--CCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTTCATGCGCC------TCGCTTCTCGCGCCTCGCT-CCTCGGACATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_SK2x1 AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTTCGATGCGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTCCATGCGCC------TCACTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_SK2x11_etc AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTTCGATGCGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTCCATGCGCC------TCACTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_saskatchewanii_SK2x2 AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTCCGATGCGCCCTCTGAGTG--TCGCCGTCATC---GGCTTATCG--CAAAGAGGGGCATTTTT-CGCTGGTGGG--GTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAGCTGCGACAA--TGCTCCCTCACCTGCGCTCTATGCGCC------TCGCTTCTCA---------------GGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_SK4x1_etc AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTTAGATGCGCCCTCTGAGTG--CCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTT--CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTTCATGCGCC------TCGCTTCTCGCGCCTCGCT-CCTCGGACATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_SK7x10 AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTTAGATGCGCCCTCTGAGTG--CCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTT--CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTTCATGCGCC------TCGCTTCTCGCGCCTCGCT-CCTCGGACATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_sclerotioides_SK6x2 AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTTCGATGCGCCCTCTGAGTG--CCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAACTGCGACAA--TGCTCCCTCACCTGCGCTCCATGCGCC------TCACTTCTCA---------------GGCATGTGCTG--ACAATCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_SK7x12 AGCCCTCCTCGCCCGTCGAATGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTTCTTTCCTTGGAGACCCGCGGCGTTTCGATGCGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCA--CAATGAGGGGCATTTTT-CGCTGGTGGGGGGTGTGCGAACATTT-GTGCGCTAGCGCTAGGCCCGATGCGGGCTTCGCGAGCTGCGACAA--TGCTCCCTCACCTGCGCTCCATGCGCC------TCGTTTCTCA---------------GGCATATGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTCGG-CAAGGGTT-------CCTTCAAGTACGCATGGGTCTTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_sclerotioides_var_viridis_VT3x2x4x1r AGCCCTCCTCGCCCGTCGCACGCGGGGTCACAGCAGCTTACACTGGACACAGACTTGATCTACAAGTGCGGAGGTATCGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCATCACTTTCCTTTACATGGAGACCCGCGGCGTTCCGATGTGCCCTCTGAGTG--TCGCCGTCGCC---GGCTTATCG--CAAAGAGGGGCATTTTTTCGCTGGTGGG--GTGTGCGAATTTTC-GCGTGTCAGCGCTAGGCCCGATGCGGGTTTAGCGAGCTGCGACAA--TGCACCCTCACCTATGTTCCATGCGCC------TCTCTCCACGCGCCT--CT-CTCCACGCATGTGCTG--ACAGTCTCT--------------CAGGAAGCCGCCGAACTTGG-CAAGGGTT-------CCTTCAAGTACGCCTGGGTCCTGGACAAATTGAAGGCCGAGCGTGAGCGTGGTAATCACCAT Phoma_medicaginis_Pmed1NY AGCACTCCTCTCCGAACGAACGCATGA-CACAACAGCTCACAATGGA-ACAGACTTGATCTACAAGTGCGGTGGTATTGACAAGCGTACCATCGAGAAGTTCGAGAAGGTACGGCA-CACTTTTCTTCCAGTGGCAA--CACGGCCTGCATCTGCGATCTTTGGGCGAGCCGCC-TCGCTTGAGGTTTATCGTTCAATGAGGGGCATTTT-----TGGTGGGG-TTGTGCGAGCTTTTCGTGCGCTAGCGCTAGCCTGCTTCGGGAGCTCGCCAACTCCAACACCATGCCCCACAGCGTATTTTGCACCCTCCAGTGTGTTGCACCGCGAGCTTTTCGACCTTGGTCAAAAGCCGCGACACCCTCCACGCCTCCTTGCACCGCGAGCTTTTCGACTTCGGTCAAAAGCCGCGACACCCTCCACACCTCCTTGCACCGTGAGCTTTTCGACTTCGGTCAAAAGCCGCGACACCCTCCAC ; END; BEGIN TREES; Title 'EFchar: 1 of 9819 MP trees, elongation factor 1-alpha sequence data of Phoma sclerotioides'; LINK Taxa = Taxa; TRANSLATE 1 Phoma_sclerotioides_var_champlainii_Chz_1x15r_etc, 2 Phoma_sclerotioides_var_champlainii_Vt3x2x1x7r, 3 Phoma_sclerotioides_var_viridis_Chz1x30r, 4 Phoma_sclerotioides_var_viridis_All_isolates_viridis, 5 Phoma_sclerotioides_var_sclerotioides_Chz2x14cr, 6 Phoma_sclerotioides_var_sclerotioides_All_isolates_sclerotioides, 7 Phoma_sclerotioides_var_sclerotioides_Chz7x2r_etc, 8 Phoma_sclerotioides_var_sclerotioides_MT1x3x4, 9 Phoma_sclerotioides_var_macrospora_Chz7x25cr_etc, 10 Phoma_sclerotioides_var_macrospora_ON5x6, 11 Phoma_sclerotioides_var_steubenii_Chz10x18r_etc, 12 Phoma_sclerotioides_var_steubenii_Chz5x32r, 13 Phoma_sclerotioides_var_steubenii_Chz12x30r, 14 Phoma_sclerotioides_var_steubenii_All_isolates_steubenii, 15 Phoma_sclerotioides_var_viridis_Chz17x19Cr, 16 Phoma_sclerotioides_var_viridis_NH4x2x3x5r, 17 Phoma_sclerotioides_var_viridis_Chz23x18r, 18 Phoma_sclerotioides_var_viridis_ME4x1x9st, 19 Phoma_sclerotioides_var_macrospora_ME1x2x8cr, 20 Phoma_sclerotioides_var_sclerotioides_ME1x3x8st, 21 Phoma_sclerotioides_var_macrospora_ME2x8st, 22 Phoma_sclerotioides_var_macrospora_ME5x2x5r_etc, 23 Phoma_sclerotioides_var_sclerotioides_ME3x1x7r, 24 Phoma_sclerotioides_var_sclerotioides_ME3x4x15cr_etc, 25 Phoma_sclerotioides_var_steubenii_ME3x4x16cr, 26 Phoma_sclerotioides_var_obscurus_CO7x2x10a, 27 Phoma_sclerotioides_var_obscurus_MT4x4x12_etc, 28 Phoma_sclerotioides_var_saskatchewanii_MT2x1x3, 29 Phoma_sclerotioides_var_saskatchewanii_SK3x1_etc, 30 Phoma_sclerotioides_var_sclerotioides_MT2x2x11, 31 Phoma_sclerotioides_var_sclerotioides_ON4x21_etc, 32 Phoma_sclerotioides_var_viridis_MT3x3x2a, 33 Phoma_sclerotioides_var_sclerotioides_MT3x4x8, 34 Phoma_sclerotioides_var_sclerotioides_MT4x2x1, 35 Phoma_sclerotioides_var_viridis_MT4x2x7, 36 Phoma_sclerotioides_var_sclerotioides_MT4x4x4, 37 Phoma_sclerotioides_var_viridis_NH4x2x3x8r, 38 Phoma_sclerotioides_var_sclerotioides_SK2x1, 39 Phoma_sclerotioides_var_sclerotioides_SK2x11_etc, 40 Phoma_sclerotioides_var_saskatchewanii_SK2x2, 41 Phoma_sclerotioides_var_sclerotioides_SK4x1_etc, 42 Phoma_sclerotioides_var_sclerotioides_SK7x10, 43 Phoma_sclerotioides_var_sclerotioides_SK6x2, 44 Phoma_sclerotioides_SK7x12, 45 Phoma_sclerotioides_var_viridis_VT3x2x4x1r, 46 Phoma_medicaginis_Pmed1NY; TREE PAUP_9819 = ((((((1:5.0,2:5.0):0.0,34:1.0,38:0.0,39:0.0):1.0,((((((((3:0.0,4:0.0):2.0,((15:0.0,16:0.0,45:1.0):16.0,(32:1.0,35:3.0):9.0):1.0):6.0,(17:0.0,18:0.0):2.0):5.0,(26:0.0,27:0.0):3.0):3.0,(11:0.0,12:0.0):1.0):1.0,(25:0.0,(28:0.0,29:0.0,40:1.0):2.0):1.0):0.0,((9:0.0,10:0.0):1.0,19:1.0,21:0.0,22:0.0):1.0,(13:0.0,14:0.0):1.0):3.0,44:2.0):4.0,(7:0.0,8:0.0):2.0,33:2.0):2.0,43:3.0):2.0,36:4.0):0.0,((5:0.0,6:0.0,(20:1.0,23:0.0,24:0.0):2.0,37:0.0):1.0,30:0.0,31:0.0,41:0.0,42:0.0):1.0,46:133.0); END; BEGIN TREES; Title 'EFchar: Best ML tree, elongation factor 1-alpha sequence data of Phoma sclerotioides'; LINK Taxa = Taxa; TRANSLATE 1 Phoma_sclerotioides_var_champlainii_Chz_1x15r_etc, 2 Phoma_sclerotioides_var_champlainii_Vt3x2x1x7r, 3 Phoma_sclerotioides_var_viridis_Chz1x30r, 4 Phoma_sclerotioides_var_viridis_All_isolates_viridis, 5 Phoma_sclerotioides_var_sclerotioides_Chz2x14cr, 6 Phoma_sclerotioides_var_sclerotioides_All_isolates_sclerotioides, 7 Phoma_sclerotioides_var_sclerotioides_Chz7x2r_etc, 8 Phoma_sclerotioides_var_sclerotioides_MT1x3x4, 9 Phoma_sclerotioides_var_macrospora_Chz7x25cr_etc, 10 Phoma_sclerotioides_var_macrospora_ON5x6, 11 Phoma_sclerotioides_var_steubenii_Chz10x18r_etc, 12 Phoma_sclerotioides_var_steubenii_Chz5x32r, 13 Phoma_sclerotioides_var_steubenii_Chz12x30r, 14 Phoma_sclerotioides_var_steubenii_All_isolates_steubenii, 15 Phoma_sclerotioides_var_viridis_Chz17x19Cr, 16 Phoma_sclerotioides_var_viridis_NH4x2x3x5r, 17 Phoma_sclerotioides_var_viridis_Chz23x18r, 18 Phoma_sclerotioides_var_viridis_ME4x1x9st, 19 Phoma_sclerotioides_var_macrospora_ME1x2x8cr, 20 Phoma_sclerotioides_var_sclerotioides_ME1x3x8st, 21 Phoma_sclerotioides_var_macrospora_ME2x8st, 22 Phoma_sclerotioides_var_macrospora_ME5x2x5r_etc, 23 Phoma_sclerotioides_var_sclerotioides_ME3x1x7r, 24 Phoma_sclerotioides_var_sclerotioides_ME3x4x15cr_etc, 25 Phoma_sclerotioides_var_steubenii_ME3x4x16cr, 26 Phoma_sclerotioides_var_obscurus_CO7x2x10a, 27 Phoma_sclerotioides_var_obscurus_MT4x4x12_etc, 28 Phoma_sclerotioides_var_saskatchewanii_MT2x1x3, 29 Phoma_sclerotioides_var_saskatchewanii_SK3x1_etc, 30 Phoma_sclerotioides_var_sclerotioides_MT2x2x11, 31 Phoma_sclerotioides_var_sclerotioides_ON4x21_etc, 32 Phoma_sclerotioides_var_viridis_MT3x3x2a, 33 Phoma_sclerotioides_var_sclerotioides_MT3x4x8, 34 Phoma_sclerotioides_var_sclerotioides_MT4x2x1, 35 Phoma_sclerotioides_var_viridis_MT4x2x7, 36 Phoma_sclerotioides_var_sclerotioides_MT4x4x4, 37 Phoma_sclerotioides_var_viridis_NH4x2x3x8r, 38 Phoma_sclerotioides_var_sclerotioides_SK2x1, 39 Phoma_sclerotioides_var_sclerotioides_SK2x11_etc, 40 Phoma_sclerotioides_var_saskatchewanii_SK2x2, 41 Phoma_sclerotioides_var_sclerotioides_SK4x1_etc, 42 Phoma_sclerotioides_var_sclerotioides_SK7x10, 43 Phoma_sclerotioides_var_sclerotioides_SK6x2, 44 Phoma_sclerotioides_SK7x12, 45 Phoma_sclerotioides_var_viridis_VT3x2x4x1r, 46 Phoma_medicaginis_Pmed1NY; TREE ML = (((30:1.0E-8,((41:1.0E-8,42:1.0E-8):1.0E-8,31:1.0E-8):1.0E-8):1.0E-8,((6:1.0E-8,(5:1.0E-8,(20:0.00234483,(24:1.0E-8,23:1.0E-8):1.0E-8):0.00470674):1.0E-8):1.0E-8,37:1.0E-8):0.00234744):1.0E-8,(36:0.00494464,(33:0.00490265,((8:1.0E-8,7:1.0E-8):0.00490505,((34:0.00244637,(38:1.0E-8,(39:1.0E-8,((2:1.0E-8,1:1.0E-8):0.01242812,43:0.0049044):1.0E-8):1.0E-8):1.0E-8):0.00244509,(44:0.00491805,(((11:1.0E-8,12:1.0E-8):0.00245767,(14:1.0E-8,13:1.0E-8):1.0E-8):0.00246126,((((28:1.0E-8,29:1.0E-8):1.0E-8,40:0.00245472):0.00493241,25:1.0E-8):0.00246387,(((10:1.0E-8,9:1.0E-8):0.00245814,(21:1.0E-8,(19:0.0024578,22:1.0E-8):1.0E-8):1.0E-8):0.00245919,((26:1.0E-8,27:1.0E-8):0.00750219,((18:1.0E-8,17:1.0E-8):0.00482253,(((32:0.00228396,35:0.00725596):0.02506508,(3:1.0E-8,4:1.0E-8):0.00490312):0.00211302,(45:0.00237357,(16:1.0E-8,15:1.0E-8):1.0E-8):0.04046487):0.01443336):0.01427898):0.01087984):1.0E-8):1.0E-8):0.00815889):0.00267763):1.0E-8):1.0E-8):0.00543014):0.00812417,46:0.69591513); END;