#NEXUS [written Wed Nov 17 22:39:56 EST 2010 by Mesquite version 2.73 (build 544) at ComPhy.local/10.0.1.7] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=39; TAXLABELS Hedera_algeriensis_H_a0 Hedera_azorica_Sao_Miguel_a0 Hedera_colchica_H_a0 Hedera_cypria_H_a0 Hedera_helix_Baltica_a0 Hedera_maroccana_H_a0 Hedera_maroccana_sample2_H_a0 Hedera_nepalensis_var_sinensis_H_a0 Hedera_pastuchovii_H_a0 Hedera_pastuchovii_sample2_H_a0 Hedera_azorica_Pico_b0 Hedera_helix_Emerald_Gem_b0 Hedera_helix_Baltica_b0 Hedera_hibernica_H_b0 Hedera_hibernica_hibernica_b0 Hedera_hibernica_hibernica_b3 Hedera_helix_subsp._caucausigena_H_a1 Hedera_algeriensis_H_a2 Hedera_colchica_H_a3 Hedera_colchica_H_a4 Hedera_rhombea_H_a5 Hedera_rhombea_Pierot_a5 Hedera_helix_Emerald_Gem_a6 Hedera_pastuchovii_sample2_H_a7 Hedera_colchica_H_a8 Hedera_algeriensis_H_a9 Hedera_algeriensis_H_a10 Hedera_maderensis_H_a11 Hedera_maderensis_H_a12 Hedera_maroccana_S2_H_b1 Hedera_hibernica_H_b2 Hedera_hibernica_H_b4 Brassaia_actinophylla_C11FR Brassaia_actinophylla_F12FR Fatsia_japonica_C6FR Fatsia_japonica_F6FR Polyscias_fruitcosa_C8FR Polyscias_fruitcosa_G8FR Trevesia_sundica_F10FR ; END; BEGIN CHARACTERS; TITLE GBSSI_low_copy_nDNA; DIMENSIONS NCHAR=500; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Hedera_algeriensis_H_a0 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_azorica_Sao_Miguel_a0 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_colchica_H_a0 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_cypria_H_a0 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_helix_Baltica_a0 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_maroccana_H_a0 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_maroccana_sample2_H_a0 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_nepalensis_var_sinensis_H_a0 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_pastuchovii_H_a0 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_pastuchovii_sample2_H_a0 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_azorica_Pico_b0 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACACCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_helix_Emerald_Gem_b0 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACACCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_helix_Baltica_b0 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACACCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_hibernica_H_b0 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACACCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_hibernica_hibernica_b0 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACACCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_hibernica_hibernica_b3 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACACCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATAGTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_helix_subsp._caucausigena_H_a1 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATTCATTACCT Hedera_algeriensis_H_a2 GCTCCAGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_colchica_H_a3 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTGTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_colchica_H_a4 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAAGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_rhombea_H_a5 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCTTCCATTACCT Hedera_rhombea_Pierot_a5 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCTTCCATTACCT Hedera_helix_Emerald_Gem_a6 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGATATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_pastuchovii_sample2_H_a7 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTCAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_colchica_H_a8 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GAAATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTTAGAAGAGGCTTTGCATCCATTACCT Hedera_algeriensis_H_a9 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAAAGAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_algeriensis_H_a10 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAAAGAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCCTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_maderensis_H_a11 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGATGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_maderensis_H_a12 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACCCCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGATGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACCGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_maroccana_S2_H_b1 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACACCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAATTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCT Hedera_hibernica_H_b2 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACACCCTTAGGAATATGTTTAAGGCTGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATC-AACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCC Hedera_hibernica_H_b4 GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCATTCCTCTGGCTTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTAAGGAAGTGAAGCACACCCTTAGGAATATGTTTAAGGATGTTTTTGTATCAAATAAACTGACAGGGTTGGAGATATTACACAATATATCCCTTATTAGGAAG-TGAAGCACCCACTAGGAATGA-GCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATAGTAGGGATACTTACTAGAACTATTATCTGAACTTTCTGGTCTATGAACTTAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCCTCCTTCAGAAGAGGCTTTGCATCCATTACCC Brassaia_actinophylla_C11FR GCTCCGGCTGTGAGCATATGGGCCAGTGGAACATTGAATTTTGCCACTCCTCTGGCCTTGTCTGGGTATAATATTTCCAACTGCTCAATTTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTTAGGAAGTGATGCACCC-ATTAGGAATATGTTTAGGGCTGTTTTTGTATCAAATAAACTAACAGGGTTGGAGATACTAC-TAATATATCCCTTATAAGGAAG-TGAATCACCC-TAAGGAATGAGACTGTTTTTGTATCAAACAAACTAACAGGGTTGGGGATATTACAACTTCCT-GATATACTTGGGATACTTACTAGAACTATTATCTGAACTTCCTCATCTATGAACTCAGAGATAGCTGCTGCAAGGATATCTGAACCCTTCTGCTCTTCTAATCTGCCAATGAAGCCTAGAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCCTGGAGCGCTTCTTTCAGAAGAGGCTTTGCATCCATTACCT Brassaia_actinophylla_F12FR GCTCCGGCTGTGAGCATATGGGCCAGTGGAACATTGAATTTTGCCACTCCTCTGGCCTTGTCTGGGTATAATATTTCCAACTGCTCAATTTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATTTAGGAAGTGATGCACCC-ATTAGGAATATGTTTAGGGCTGTTTTTGTATCAAATAAACTAACAGGGTTGGAGATACTAC-TAATATATCCCTTATAAGGAAG-TGAATCACCC-TAAGGAATGAGACTGTTTTTGTATCAAACAAACTAACAGGGTTGGGGATATTACAACTTCCT-GATATACTTGGGATACTTACTAGAACTATTATCTGAACTTCCTCATCTATGAACTCAGAGATAGCTGCTGCAAGGATATCTGAACCCTTCTGCTCTTCTAATCTGCCAATGAAGCCTAGAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCCTGGAGCGCTTCTTTCAGAAGAGGCTTTGCATCCATTACCT Fatsia_japonica_C6FR GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTTGCCACTCCTCTGGCCTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTAT-AAGGAAGTGAAGCACCC-ATTAGGAATATGTTTAGGGCTGTTTTTGTATCAAATAAACTAACAGGGTTGGAGATATTACATGATATATCCCTTATAAGGAAG-TGAAGCACCCATTTGGAATGAGGCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCTCGATATACTAGGGATACTTACTAGAACTATTATCTGAACTTCCTCATCTATGAACTCAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTATTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCTTCTTTCAGAAGAGGCTTTGCATCCATTACCT Fatsia_japonica_F6FR GCTCCGGCTGTGATCATATGGGCCAGTGGAACATTGAATTTAGCCACTCCTCTGGCCTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTAC-AAGGAAGTGAAGCACCC-ATTAGGAATATGTTTAGGGCTGTTTTTGTATCGAATAAACTAACAGGGTTGGAGATATTACACGATATATCCCTTATAAGAAAG-TGAAGCACCCATTAGGAATGAGGCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTCCTCGTCTATGAACTCAGAGATAGCTGCCGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCTTCTTTCAGAAGAGGCTTCGCATCCATTACCT Polyscias_fruitcosa_C8FR GCTCCGGCTGTGAGCATATGGGCTAGTGGAACATTGAATTTTGCCACTCCTCTGGCCTTGTCTGGGTATAATATCTCTAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATAAAG-AAGTGAAGCGCCC-ATTAGGAATATGTTTACGGCTGTTTTTGTATCAAATAAACTAACAGGATTGAAGATATTTTATGATATATCCCTTACAAGGAATATGAAGCACCCATTAGGAATGAGGTTGTTTATGTATTAAACAAACTAACAGGGTTGGAGCTATTACAACTTCCT-GATATAGTA-GGATACTTACTAGAACTATTATCTGAACTTCCTCATCTATGAACTCAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCGATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGAAGTGCTTCTTTCAGAAGAGGCTTTGCATCCATTACCT Polyscias_fruitcosa_G8FR GCTCCGGCTGTGAGCATATGGGCTAGTGGAACATTGACTTTTGCCACTCCTCTGGCCTTGTCTGGGTATAATATCTCTAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTATAAAG-AAGTGAAGCGCCC-ATTAGGAATATGTTTACGGCTGTTTTTGTATCAAATAAACTAACAGGATTGAAGATATTTTATGATATATCCCTTACAAGGAATATGAAGCACCCATTAGGAATGAGGTTGTTTATGTATTAAACAAACTAACAGGGTTGGAGCTATTACAACTTCCT-GATATAGTA-GGATACTTACTAGAACTATTATCTGAACTTCCTCATCTATGAACTCAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCGATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGAAGTGCTTCTTTCAGAAGAGGCTTTGCATCCATTACCT Trevesia_sundica_F10FR GCTCCGGCTGTGATCATATGGGCCAGGGGAACATTGAATTTTGCCACTCCTCTGGCCTTGTCTGGGTATAATATCTCCAACTGCTCAAGCTGTTTCTCCATTTGCTTTTTGCCAGTTCCCTAT-AAGGAAGTGAAGCACCC-ATTAGGAATATGTTTAGGGCTGTTTTTGTATCAAATAAACTAACAGGGTTGGAGATATTACATGATATATCCCTTATAAGGAAG-TGAAGCACCCATTAGGAATGAGGCTGTTTTTGTATCAAACAAACTAACAGGGTTGGAGATATTACAACTTCCT-GATATACTAGGGATACTTACTAGAACTATTATCTGAACTTCCTCATCTATGAACTCAGAGATAGCTGCTGCAAGGATATCTGAACCCTTTTGCTCTTCTAATCTGCCAATGAAGCCTATAACAGGGACTTTACTATCCACTGGTAATCCAACTTCTGCTTGGAGCGCTTCTTTCAGAAGAGGCTTTGCATCCATTACCT ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 500; END; BEGIN TREES; Title GBSSI_low_copy_nDNA; LINK Taxa = Taxa; TRANSLATE 1 Hedera_algeriensis_H_a0, 2 Hedera_azorica_Sao_Miguel_a0, 3 Hedera_colchica_H_a0, 4 Hedera_cypria_H_a0, 5 Hedera_helix_Baltica_a0, 6 Hedera_maroccana_H_a0, 7 Hedera_maroccana_sample2_H_a0, 8 Hedera_nepalensis_var_sinensis_H_a0, 9 Hedera_pastuchovii_H_a0, 10 Hedera_pastuchovii_sample2_H_a0, 11 Hedera_azorica_Pico_b0, 12 Hedera_helix_Emerald_Gem_b0, 13 Hedera_helix_Baltica_b0, 14 Hedera_hibernica_H_b0, 15 Hedera_hibernica_hibernica_b0, 16 Hedera_hibernica_hibernica_b3, 17 Hedera_helix_subsp._caucausigena_H_a1, 18 Hedera_algeriensis_H_a2, 19 Hedera_colchica_H_a3, 20 Hedera_colchica_H_a4, 21 Hedera_rhombea_H_a5, 22 Hedera_rhombea_Pierot_a5, 23 Hedera_helix_Emerald_Gem_a6, 24 Hedera_pastuchovii_sample2_H_a7, 25 Hedera_colchica_H_a8, 26 Hedera_algeriensis_H_a9, 27 Hedera_algeriensis_H_a10, 28 Hedera_maderensis_H_a11, 29 Hedera_maderensis_H_a12, 30 Hedera_maroccana_S2_H_b1, 31 Hedera_hibernica_H_b2, 32 Hedera_hibernica_H_b4, 33 Brassaia_actinophylla_C11FR, 34 Brassaia_actinophylla_F12FR, 35 Fatsia_japonica_C6FR, 36 Fatsia_japonica_F6FR, 37 Polyscias_fruitcosa_C8FR, 38 Polyscias_fruitcosa_G8FR, 39 Trevesia_sundica_F10FR; TREE PAUP_1 = (((((((1:0.0,(2:0.0,(3:0.0,(4:0.0,(5:0.0,(6:0.0,(7:0.0,(8:0.0,(9:0.0,(10:0.0,(17:1.0,((((((18:1.0,20:1.0):0.0,(28:0.0,29:1.0):1.0):0.0,(25:2.0,(26:0.0,27:1.0):2.0):0.0):0.0,23:1.0):0.0,24:1.0):0.0,(21:0.0,22:0.0):1.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0,((((((11:0.0,30:1.0):0.0,12:0.0):0.0,13:0.0):0.0,14:0.0):0.0,15:0.0):0.0,(16:1.0,(31:0.0,32:2.0):1.0):0.0):1.0):0.0,19:1.0):12.0,36:7.0):2.0,(33:0.0,34:0.0):15.0):1.0,(35:2.0,39:1.0):0.0):0.0,(37:0.0,38:1.0):20.0); END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 500; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 500; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1290051596413; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 456391764309441755; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 392378082280840823; mqVersion 273; checksumv 0 2 3810555871 null getNumChars 500 numChars 500 getNumTaxa 39 numTaxa 39 short true bits 15 states 15 sumSquaresStatesOnly 481197.0 sumSquares 481197.0 NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 285; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1167 615; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; endTell; end;