#NEXUS [written Fri Dec 03 15:37:03 BRST 2010 by Mesquite version 2.72 (build 528) at Marilia-PC/192.168.0.132] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=56; TAXLABELS Chiranthodendron_pentadactylon Bernoullia_flammea Huberodendron_patinoi Gyranthera_caribensis Bombax_buonopozense Bombax_ceiba Scleronema_micranthum Catostemma_fragrans Cavanillesia_platanifolia Adansonia_digitata Adansonia_grandidieri Adansonia_za Adansonia_gregorii Spirotheca_rosea Pachira_quinata Pseudobombax_marginatum Pseudobombax_croizatii Pseudobombax_grandiflorum Ceiba_aesculifolia Ceiba_acuminata Ceiba_pentandra Ceiba_crispiflora Ceiba_speciosa Neobuchia_paulinae Ceiba_schottii Pachira_flaviflora Pachira_glabra Pachira_insignis Pachira_minor Pachira_aquatica Eriotheca_gracilipes Eriotheca__parvifolia Eriotheca_dolichopoda Eriotheca_pubescens Eriotheca_surinamensis Eriotheca_sp Eriotheca_macrophylla Eriotheca_pentaphylla Eriotheca_longipedicellata Eriotheca_longitubulosa Eriotheca_candolleana Eriotheca_obcordata Eriotheca_squamigera Eriotheca__roseorum Eriotheca_discolor Eriotheca_ruizii Rhodognaphalon_schumannianum Pentaplaris_doroteae Gossypium_hirsutum Camptostemon_schultzii Abutilon_theophrasti Matisia_palenquiana Fremontodendron_californicum Ochroma_pyramidale Patinoa_sphaerocarpa Septotheca_tessmannii ; END; BEGIN TREES; Title Trees_from_TRNLF_bayesian_analyses; LINK Taxa = Taxa; TRANSLATE 1 Chiranthodendron_pentadactylon, 2 Bernoullia_flammea, 3 Huberodendron_patinoi, 4 Gyranthera_caribensis, 5 Bombax_buonopozense, 6 Bombax_ceiba, 7 Scleronema_micranthum, 8 Catostemma_fragrans, 9 Cavanillesia_platanifolia, 10 Adansonia_digitata, 11 Adansonia_grandidieri, 12 Adansonia_za, 13 Adansonia_gregorii, 14 Spirotheca_rosea, 15 Pachira_quinata, 16 Pseudobombax_marginatum, 17 Pseudobombax_croizatii, 18 Pseudobombax_grandiflorum, 19 Ceiba_aesculifolia, 20 Ceiba_acuminata, 21 Ceiba_pentandra, 22 Ceiba_crispiflora, 23 Ceiba_speciosa, 24 Neobuchia_paulinae, 25 Ceiba_schottii, 26 Pachira_flaviflora, 27 Pachira_glabra, 28 Pachira_insignis, 29 Pachira_minor, 30 Pachira_aquatica, 31 Eriotheca_gracilipes, 32 Eriotheca__parvifolia, 33 Eriotheca_dolichopoda, 34 Eriotheca_pubescens, 35 Eriotheca_surinamensis, 36 Eriotheca_sp, 37 Eriotheca_macrophylla, 38 Eriotheca_pentaphylla, 39 Eriotheca_longipedicellata, 40 Eriotheca_longitubulosa, 41 Eriotheca_candolleana, 42 Eriotheca_obcordata, 43 Eriotheca_squamigera, 44 Eriotheca__roseorum, 45 Eriotheca_discolor, 46 Eriotheca_ruizii, 47 Rhodognaphalon_schumannianum, 48 Pentaplaris_doroteae, 49 Gossypium_hirsutum, 50 Camptostemon_schultzii, 51 Abutilon_theophrasti, 52 Matisia_palenquiana, 53 Fremontodendron_californicum, 54 Ochroma_pyramidale, 55 Patinoa_sphaerocarpa, 56 Septotheca_tessmannii; TREE con_50_majrule = (1:0.015598,(((2:0.096093,(3:0.06765,4:0.035757)0.97:0.04183)0.70:0.028449,(5:0.036863,6:0.087865)1.00:0.080222)0.62:0.031006,(7:0.098678,8:0.098055)0.99:0.0472,9:0.096495,((10:0.089691,(11:0.031417,12:0.030547)1.00:0.060433,13:0.016211)1.00:0.09417,((14:0.119607,15:0.109885,((16:0.014371,17:0.02817,18:0.014122)1.00:0.096641,((19:0.04387,20:0.015089)1.00:0.182495,(21:0.092164,(22:0.01502,23:0.015034)0.99:0.044475,24:0.067629)0.80:0.034657,25:0.072477)1.00:0.086983)0.83:0.044674)0.99:0.050405,(((26:0.018791,27:0.019063)0.94:0.035357,28:0.01566,29:0.015951,30:0.031443,(31:0.05102,(32:0.185181,33:0.289517)1.00:0.113622)0.98:0.03975,(34:0.060309,35:0.015891)0.95:0.028474,36:0.029743,37:0.047319,38:0.097232,(39:0.07779,40:0.02345)0.99:0.058133,41:0.157577,42:0.060381,43:0.081888)0.63:0.028218,44:0.117505,(45:0.026295,46:0.01654)1.00:0.064914)0.99:0.049576)0.96:0.029119)0.92:0.027471,47:0.030522)0.99:0.047789,((48:0.038257,49:0.688139,50:0.159179,51:0.521038)0.85:0.035604,52:0.177448)0.95:0.048815,(53:0.109335,54:0.030143,55:0.090379,56:0.07947)0.74:0.031141); TREE con_50_majrule = (1:0.015598,(((2:0.096093,(3:0.06765,4:0.035757):0.04183):0.028449,(5:0.036863,6:0.087865):0.080222):0.031006,(7:0.098678,8:0.098055):0.0472,9:0.096495,((10:0.089691,(11:0.031417,12:0.030547):0.060433,13:0.016211):0.09417,((14:0.119607,15:0.109885,((16:0.014371,17:0.02817,18:0.014122):0.096641,((19:0.04387,20:0.015089):0.182495,(21:0.092164,(22:0.01502,23:0.015034):0.044475,24:0.067629):0.034657,25:0.072477):0.086983):0.044674):0.050405,(((26:0.018791,27:0.019063):0.035357,28:0.01566,29:0.015951,30:0.031443,(31:0.05102,(32:0.185181,33:0.289517):0.113622):0.03975,(34:0.060309,35:0.015891):0.028474,36:0.029743,37:0.047319,38:0.097232,(39:0.07779,40:0.02345):0.058133,41:0.157577,42:0.060381,43:0.081888):0.028218,44:0.117505,(45:0.026295,46:0.01654):0.064914):0.049576):0.029119):0.027471,47:0.030522):0.047789,((48:0.038257,49:0.688139,50:0.159179,51:0.521038):0.035604,52:0.177448):0.048815,(53:0.109335,54:0.030143,55:0.090379,56:0.07947):0.031141); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 6479982105029921521; endTell; getWindow; tell It; suppress; setResourcesState false false 230; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 464; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #6479982105029921521 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #6479982105029921521; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 470 397; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; setActive; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; endTell; end; #NEXUS begin trees; tree con_50_majrule = ( Chiranthodendron_pentadactylon : 0.015571 , ( ( ( Bernoullia_flammea : 0.095978 , ( Huberodendron_patinoi : 0.067624 , Gyranthera_caribensis : 0.035724 ) 0.97 : 0.041761 ) 0.70 : 0.028395 , ( Bombax_buonopozense : 0.036764 , Bombax_ceiba : 0.087794 ) 1.00 : 0.080194 ) 0.62 : 0.030968 , ( Scleronema_micrantha : 0.098574 , Catostemma_fragans : 0.097966 ) 0.99 : 0.047167 , Cavanillesia_plantanifolia : 0.096401 , ( ( Adansonia_digitata : 0.089675 , ( Adansonia_grandidieri : 0.031416 , Adansonia_za : 0.030520 ) 1.00 : 0.060369 , Adansonia_gibbosa : 0.016168 ) 1.00 : 0.094079 , ( ( Spirotheca_rosea : 0.119447 , Bombacopsis_quinata : 0.109775 , ( ( Pseudobombax_marginatum : 0.014372 , Pseudobombax_croizatii : 0.028152 , Pseudobombax_grandiflorum : 0.014101 ) 1.00 : 0.096536 , ( ( Ceiba_aesculifolia : 0.043890 , Cebia_acuminata : 0.015041 ) 1.00 : 0.182350 , ( Ceiba_pentandra : 0.092059 , ( Ceiba_crispifolia : 0.014968 , Ceiba_speciosa : 0.014993 ) 0.99 : 0.044407 , Neobuchia_paulinae : 0.067519 ) 0.80 : 0.034615 , Ceiba_schotti : 0.072287 ) 1.00 : 0.086861 ) 0.83 : 0.044670 ) 0.99 : 0.050414 , ( ( ( Rhodognaphalopsis_flaviflora : 0.018733 , Pachira_glabra : 0.019000 ) 0.94 : 0.035317 , Pachira_insignis : 0.015663 , Pachira_minor : 0.015948 , Pachira_aquatica : 0.031409 , ( Eriotheca_gracilipes : 0.051002 , ( Eriotheca__parvifolia : 0.185134 , Eriotheca_dolichopoda : 0.289182 ) 1.00 : 0.113384 ) 0.98 : 0.039717 , ( Eriotheca_pubescens : 0.060314 , Eriotheca_surinamensis : 0.015871 ) 0.95 : 0.028421 , Eriotheca_sp_nova_89 : 0.029729 , Eriotheca_cf_macro_90 : 0.047324 , Eriotheca_pentaphylla : 0.097143 , ( Eriotheca_longipedicellata : 0.077602 , Eriotheca_longitubulosa : 0.023437 ) 0.99 : 0.058029 , Eriotheca_candolleana : 0.157598 , Eriotheca_af._obcordata_15 : 0.060306 , Eriotheca_squamigera : 0.081848 ) 0.63 : 0.028198 , Eriotheca__roseorum : 0.117471 , ( Eriotheca_discolor : 0.026216 , Eriotheca_ruizii : 0.016512 ) 1.00 : 0.064886 ) 0.99 : 0.049557 ) 0.96 : 0.029084 ) 0.92 : 0.027431 , Rhodognaphalon_schumannianium : 0.030453 ) 1.00 : 0.047817 , ( ( Pentaplaris_doroteae : 0.038225 , Gossypium : 0.687849 , Camptostemon_shultzii : 0.159127 , Abutilon_theophrasti : 0.520490 ) 0.85 : 0.035535 , Matisia_palenquiana : 0.177271 ) 0.95 : 0.048755 , ( Fremontodendron_califrnicum : 0.109284 , Ochroma_pyramidale : 0.030063 , Patinoa_sp_269 : 0.090256 , Septotheca_tessmannii : 0.079329 ) 0.74 : 0.031083 ); tree con_50_majrule = ( Chiranthodendron_pentadactylon : 0.015571 , ( ( ( Bernoullia_flammea : 0.095978 , ( Huberodendron_patinoi : 0.067624 , Gyranthera_caribensis : 0.035724 ) : 0.041761 ) : 0.028395 , ( Bombax_buonopozense : 0.036764 , Bombax_ceiba : 0.087794 ) : 0.080194 ) : 0.030968 , ( Scleronema_micrantha : 0.098574 , Catostemma_fragans : 0.097966 ) : 0.047167 , Cavanillesia_plantanifolia : 0.096401 , ( ( Adansonia_digitata : 0.089675 , ( Adansonia_grandidieri : 0.031416 , Adansonia_za : 0.030520 ) : 0.060369 , Adansonia_gibbosa : 0.016168 ) : 0.094079 , ( ( Spirotheca_rosea : 0.119447 , Bombacopsis_quinata : 0.109775 , ( ( Pseudobombax_marginatum : 0.014372 , Pseudobombax_croizatii : 0.028152 , Pseudobombax_grandiflorum : 0.014101 ) : 0.096536 , ( ( Ceiba_aesculifolia : 0.043890 , Cebia_acuminata : 0.015041 ) : 0.182350 , ( Ceiba_pentandra : 0.092059 , ( Ceiba_crispifolia : 0.014968 , Ceiba_speciosa : 0.014993 ) : 0.044407 , Neobuchia_paulinae : 0.067519 ) : 0.034615 , Ceiba_schotti : 0.072287 ) : 0.086861 ) : 0.044670 ) : 0.050414 , ( ( ( Rhodognaphalopsis_flaviflora : 0.018733 , Pachira_glabra : 0.019000 ) : 0.035317 , Pachira_insignis : 0.015663 , Pachira_minor : 0.015948 , Pachira_aquatica : 0.031409 , ( Eriotheca_gracilipes : 0.051002 , ( Eriotheca__parvifolia : 0.185134 , Eriotheca_dolichopoda : 0.289182 ) : 0.113384 ) : 0.039717 , ( Eriotheca_pubescens : 0.060314 , Eriotheca_surinamensis : 0.015871 ) : 0.028421 , Eriotheca_sp_nova_89 : 0.029729 , Eriotheca_cf_macro_90 : 0.047324 , Eriotheca_pentaphylla : 0.097143 , ( Eriotheca_longipedicellata : 0.077602 , Eriotheca_longitubulosa : 0.023437 ) : 0.058029 , Eriotheca_candolleana : 0.157598 , Eriotheca_af._obcordata_15 : 0.060306 , Eriotheca_squamigera : 0.081848 ) : 0.028198 , Eriotheca__roseorum : 0.117471 , ( Eriotheca_discolor : 0.026216 , Eriotheca_ruizii : 0.016512 ) : 0.064886 ) : 0.049557 ) : 0.029084 ) : 0.027431 , Rhodognaphalon_schumannianium : 0.030453 ) : 0.047817 , ( ( Pentaplaris_doroteae : 0.038225 , Gossypium : 0.687849 , Camptostemon_shultzii : 0.159127 , Abutilon_theophrasti : 0.520490 ) : 0.035535 , Matisia_palenquiana : 0.177271 ) : 0.048755 , ( Fremontodendron_califrnicum : 0.109284 , Ochroma_pyramidale : 0.030063 , Patinoa_sp_269 : 0.090256 , Septotheca_tessmannii : 0.079329 ) : 0.031083 ); END;