#NEXUS [written Thu Jan 20 17:02:49 EST 2011 by Mesquite version 2.73 (build 544) at dhcp128036177160.central.yale.edu/128.36.177.160] BEGIN TAXA; TITLE taxa; DIMENSIONS NTAX=43; TAXLABELS Agrostemma_githago Atocion_lerchenfeldianum Beta_vulgaris Eudianthe_laeta Heliosperma_pusillum Lychnis_coronaria Petrocoptis_pyrenaica Silene_acaulis Silene_akinfievii Silene_ammophila Silene_conica Silene_coniflora_D Silene_coniflora_S Silene_conoidea Silene_davidii Silene_fruticosa Silene_integripetala Silene_latifolia_ASCH Silene_latifolia_BAR Silene_latifolia_SDG Silene_littorea Silene_lydia Silene_macrodonta Silene_multinervia_P Silene_multinervia_S Silene_noctiflora Silene_pendula Silene_pygmaea Silene_samia Silene_schafta Silene_schwarzenbergeri Silene_sorensenis Silene_subconica Silene_turkestanica Silene_uniflora Silene_vulgaris_1v Silene_vulgaris_30v Silene_vulgaris_37v Silene_vulgaris_sv03 Silene_vulgaris_sv06 Silene_zawadzkii Viscaria_alpina Viscaria_vulgaris ; END; BEGIN CHARACTERS; TITLE cox3; DIMENSIONS NCHAR=674; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Agrostemma_githago AGATAGAGACAAATAAGAATAACCAAACCACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATGCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACTACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAAGTGTTGCACCCCCTTGAAATGAGTGCATG Atocion_lerchenfeldianum ??????AGACAAATAAGAATAACCAAACCACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCCAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAAGTGTTGCACCCCCTTGAAATGAGTGCATG Beta_vulgaris ???????????????????????????????????????????CCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCAGATGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTCATAATATTCCATTCCTTGAAAGCCAGTGAAGACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCGAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGATACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCATACAAACATGGTATATAGGATAAAAATAAGGCCCAAACTTAGAA????????????????????????????? Eudianthe_laeta AGATAGAGACAAATAAGAATAACCAAACCACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACTACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAATAAGGCCCAAACTTAGAAGTGTTGCACCCCCTTGAAATGAGTGCATG Heliosperma_pusillum ????????????????????????????????TCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATACCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTTAGAAGTGTTGCACCCCCTTGAAATGAGTGCATG Lychnis_coronaria ???????????????????????????????????????????CCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCAGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAAGAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGAGAAAAAGAAGGCCCAAACTGAGAA????????????????????????????? Petrocoptis_pyrenaica ????????????????????????????CACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAAGTGTTGCACCCCCTTGAAATGAGTGCATG Silene_acaulis ???????????????????????????????????????????CCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTTAAAGAACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAAGAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGAGAAAAAGAAGGCCCAAACTGAGAA????????????????????????????? Silene_akinfievii AGATAGAGACAAATAAGAATAACCAAACCACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAAGAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAAGTGTTGCACCCCC???????????????? Silene_ammophila ?????GAGACGAATAGGAATAACCAAACTACGTCCACAAAATGCCAGTACCAGGCAGCTGCTTCAAAGCCTACGTGATGTTCCTTTGTAAAAGAACCTCGAAATTGTCGAATAGCTGAGACAATCAAGAAGATAGTGCCTATAATGACATGAAAGCCATGAAAGCCTGTTGCTAAGAAAAAGGTCGAACCATAAATGCTATCCGAAATAGTGAAGGGCGCTTGTAAATATTCCATTCCTTGAAATCCGGTGAAGACTAAAGCCATTAAAACAGTTGCTACTAAAGCGAAAACTGCGCGTTTTGACTTCCCCGCGAGTATCGCATGATGAGCCCACGTTACGGCTGCTCCGGATGAGAGAAGAATCATTGTATTCAGAAAAGGTATTTCCCAAGGATCTAAAACTAGAAGGCCTTTAGGCGGCCAAATACCTCCTATCTCTACTGCGGGCGCCAAAGAAGAATGAAAAAAAGCCCAAAAAAAGGCAAAAAAGAACATAACTTCGGAGACGATGAACAAAAGAAAGCCATATCGCAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCGCGCCACCACACCCACATAGTATATAGAAGAAAAAGAATGCCCAAACTGAGCAGTATTTCACCGCCTTGAAATGCGTGCATG Silene_conica ??ATAGAGACGAATAGGAATAACCAAACTACGTCCACAAAATGCCAGTACCAGGCAGCTGCTTCAAAGCCTACGTGATGTTCCTTGGTAAACGAACCTCGAAATTGTCGAATACCTGAGACAATCAAGAAGATAGTTCCTATAATGACATGAAAGCCATGAAAGCCTGTTGCTAAGAAAAAGGTCGAACCATAAATGCTATCCGAAATAGTGAAGGGCGCTTGGAAATACTCCATTCCTTGAAATCCGGTGAAGACTAAAGCCATTAAAACAGTAGCTACTAAAGCGAAAACTGCGCGTTTTGACTTCCCCGCGAGTATCGCATGATGAGCCCATGTTACGGCTGCTCCGGATGAGAGAAGAATCATTGTATTGAGAAAAGGTATTTCCCAAGGATCTAAAACTAGAAGGCCTTTAGGCGGCCAAATACCTCCTATCTCTACTGCGGGCGCCAAAGAAGAATGAAAAAAAGCCCAAAAAAAGGCAAAAAAGAACATAACTTCAGAGACGATGAACAAAAGAAAGCCATATCGCAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCGCGCCACCACACCCACATAGTATAGAGGAGAAAAAGAATGCCCAAACTGAGCAGTATTTCACCGCCTTGAAATGCGTGCATG Silene_coniflora_D ??????????????????????????????????????????????????????????????????????AACGTGATGTTCTTTGGTAAAAGAGCCTCGAAATTGTCGAATACCCGATACAATCAAAAAAAGAGTCCCTATAATGACATGAAAGCCATGAAATCCGGTTGCTAAGAAAAAGGTAGAACCATAAACGCTATCCGAAATAGTGAAGGGCGCTTGAAAATATTCCATTCCTTGAAAGCCCGTGAAGACTATAGCCATTAAAACTGTTGCTACTAAAGCGAAAACTGCTCTTTTTGACTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCTGCTCCGGATGAGAGAAGAATCATTGTATTCAGAAAAGGTATTTCCCAAGGATCTAAAACTAGAAGCCCTTTAGGAGGCCAAATACCCCCTATCTCTACCGCCGGCGCCAAAGAGGAATGAAAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACTTCGGAGACGATGAACAAAAGAAAACCATATCGAAGTCCTAATTGTACTACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCACGCCACCACACCCACATA??????????????????????????????????????????????????????????????? Silene_coniflora_S ??????????????????????????????????????????????????????????????????????AACGTGATGTTCTTTGGTAAAAGAGCCTCGAAATTGTCGAATACCCGATACAATCAAAAAAAGAGTCCCTATAATGACATGAAAGCCATGAAATCCGGTTGCTAAGAAAAAGGTAGAACCATAAACGCTATCCGAAATAGTGAAGGGCGCTTGAAAATATTCCATTCCTTGAAAGCCCGTGAAGACTATAGCCATTAAAACTGTTGCTACTAAAGCGAAAACTGCTCTTTTTGACTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCTGCTCCGGATGAGAGAAGAATCATTGTATTCAGAAAAGGTATTTCCCAAGGATCTAAAACTAGAAGCCCTTTAGGAGGCCAAATACCCCCTATCTCTACCGCCGGCGCCAAAGAGGAATGAAAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACTTCGGAGACGATGAACAAAAGAAAACCATATCGAAGTCCTAATTGTACTACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCACGCCACCACACCCACATA??????????????????????????????????????????????????????????????? Silene_conoidea ????????ACAAACAAGAATAACCAAACTACGTCCACAAAATGCCAGTACCAGGCAGCAGCTTCAAAGCCAACGTGGTGTTCCTTGGTAAAAGAACCTCGAAATTGGCGAATACCCGAGACAATCAAGAAAAGAGTGCCTATAATGACATGAAAGCCATGAAAGCCTGTTGCTAAGAAAAAGGTCGAACCATAAATGCTATCCGAAATAGTGAAGGGCGCTTGCAAATATTCCATTCCTTGAAAGCCCGTGAAGACTATAGCCATTAAAACTGTTGCTACTAAAGCGAAAACTGCTCGTTTTGACTTCCCCGCGAGTATAGCATGATGAGCCCAAGTGACGGCTGCTCCGGATGAGAGAAGAATCATTGTATTCAGAAAAGGTATTTCCCAAGGATCTAAAACTAGAAGCCCTTTAGGAGGCCAAATACCGCCTATCTCTACCGCCGGCGCCAAAGAAGAATGAAAAAAAGCCCAAAAAAAGGCAAAAAAGAACATAACTTCCGAGACGATGAACAAAAGAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCACGCCACCACACCCACATAGTATAGAGGAGAAAAAGAATGCCCAAACTGAGCAGTATTTCACCACCCCGAAATGCGTGCATG Silene_davidii ????AGAGACAAATAAGAATAACCAAACCACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAACCCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAACCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAAGTCTTGCACCCCCTTGAAATGAGTGCATG Silene_fruticosa ???????????????????????????CCACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGCTTAAAGAACCAAAGTATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCAGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGAATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCAGAGACGATGAAAAAAAGAAAACCATATCGCAGCCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTAGATTCACGTAGAACATCACGCCACCACACAAACATGGTATATAGGAGAAAAAGAAGGCCCAAACTGAGAAGTGTTGAACCC?????????????????? Silene_integripetala ????????????????????????????CACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAACCCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAAGTGTTGCACCCCCTTGAAATGAGTGCAT? Silene_latifolia_ASCH ???????????????????????????????????????????CCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCAGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAA????????????????????????????? Silene_latifolia_BAR ???????????????????????????????????????????CCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCAGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACTACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGAGAAAAAGAAGGCCCAAACTGAGAA????????????????????????????? Silene_latifolia_SDG ????????????????????????????????????????????CAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCAGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAA????????????????????????????? Silene_littorea ???????????????????????????CCACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAAGTGTTGCACCC?????????????????? Silene_lydia AGATAGAGACAAATAGGAATAACCAAACTACGTCCACAAAATGCCAGTACCAGGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTAAAAGACCCTCGAAATTGTCGAATACCTGAGACAATCAAGAAAAGAGTGCCTATAATGACATGAAAGCCATGAAATCCTGTCGCTAAGAAAAAGGTCGAACCATAAACGCTATCCGAAATAGTGAAGGGCGCTTCCAAATATTCCATTCCTTGAAAGCCCGTGAAGACTAAAGCCAGTAAAACTGTTGCTACTAAAGCGCAAACTGCTCTTTTTGCCTTCCCTGCGAGTATAGCATGATGAGCCCAAGTTACGGCTGCTCCGGATGAGAGAAGAATCAGGGTATTCAGAAAGGGTATTTCCCAAGGATCTAAAACAAGAAGACCTTTAGGAGGCCAAATTCCTCCTATCTCTACCGCCGGCGCCAAAGAAGAATGAAAAAAAGCCCAAAAAAAGGCAAAAAAGAACATAACTTCCGAGACGATGAACAAAAGAAAGCCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCACGCCACCACACCCACATAGTATAGAGGAGAAAAAGAATGCCCAAACTGAGCAGGATTTCACCCCCTTGAAATGAGTGCATG Silene_macrodonta ?????GAGACAAATAGGAATAACCAAACTACGTCCACAAAATGCCAGTACCAGGCAGCTGCTTCAAAGCCAACGTGATGATCCTTGGTAAAAGAACCTCTAAATTGTCGAATACCTGAGACAATCAAGAAAAGAGTGCCTATAATGACATGAAAGCCATGAAAGCCGGTTGCTAAGAAAAAGGTCGAACCATAAATGCTATCCGAAATAGTGAAGGGCGCTTGGAAATATTCCATTCCTTGAAAGCCTGTGAAGACTAAAGCCATTAAAACTGTTGCTACTAAAGCGAAAACTGCGCGTTTTGCCTTCCCGGCGAGTATAGCATGATGAGCCCAAGTTACGGCTGCTCCGGATGAGAGAAGAATCATTGTATTCAGAAAGGGTATTTCCCAAGGATCTAAAACTAGAAGGCCTTTAGGAGGCCAAATACCTCCTATCTCTACTGCGGGCGCCAAAGAAGAATGAAAAAAAGCCCAAAAAAAGGCAAAAAAGAACATAACTTCCGAGACGATGAACAAAAGAAAGCCATATCGCAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCGCGCCACCACACCCACATAGTATAGAGAAGAAAAAGAATGCCCAAACTGAGCAGTATTTCACCACCTTGAAATGCGTGCATG Silene_multinervia_P ????????ACAAATAAGAATAACCAAACTACATCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTTAAAGAACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATACCTTTTGGAGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCTGAGACGATGAACAAAAGAAAACCATATCGCAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTGTATAGGAGAAAAAGAAGGCCCAAACTGAGAAGTTTTTCACCCCCTTGAAATGAGTGCATG Silene_multinervia_S ????????ACAAATAAGAATAACCAAACTACATCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTTAAAGAACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATACCTTTTGGAGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCTGAGACGATGAACAAAAGAAAACCATATCGCAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTGTATAGGAGAAAAAGAAGGCCCAAACTGAGAAGTTTTTCACCCCCTTGAAATGAGTGCATG Silene_noctiflora ???????????????????????????????????????????CCAGTACCAAGCAGCAGCTTCAAAGCCAACGTGATGAGACTTGCTAAAAGAACCAAAATATTGACGAATACCACAGATAATCAAGAAAAGACTACCTATAAGCACATGAAAACCATGAAAGCCAGTTGCTAAGAAAAAAGTAGAACCATAAATACTATCAGAAATAGTAAAGGGAGCTTGATAATATTCCATCCCTTGAAAGCCAGTGAAGACCAGAGCCAGTAAAACAGTAGCTACTAAAGCGTAAACAGCACTCTTTTGCTTACCCGCCAGTATAGCATGATGAGCCCAAGTTACGCCAGCTCCAGATGAAAGAAGAATCAGCGTATTCAGAAAAGGGATTTCCCAAGGATCTAAAACAAAGATACCTTTTGGGGGCCAAATACCTCCTATCTCTATTGAAGGTGCCAAAGACGAATGAGAGAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAAGAAAAGAAAGCCATATCGCAGTCCTAATTGTACTACTTTGGTATGATGTCCTTCTAATGTGGATTCGCGTAGAACATCCCGCCACCACACAAACATGGTATAGAGGAGAAAAAGAAGGCCCAAAGTCAGAA????????????????????????????? Silene_pendula AGATAGAGACAAATAAGAATAACCAAACCACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAACCCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTAGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGAGAAAAAGAAGGCCCAAACTGAGAAGTGTTGCACCCCCTTGAAATGAGTGCAT? Silene_pygmaea ???TAGAGACAAATAAGAATAACCAAACCACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCCAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGAGAAAAAGAAGGCCCAAACTGAGAAGTGTTGAACCCCCTTGAAATGAGTGCATG Silene_samia ???????????????????????????CCACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAACCCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATCAGGGTATTAAGAAAAGGTATTTCCCAAGGATCTAAAACCCAAATACCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGAGAAAAAGAAGGCCCAAACTGAGAAGTGTTGCACCC?????????????????? Silene_schafta ??????????AAATAAGAATAACCAAACCACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCCAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCAGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAAGAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGAGAAAAAGAAGGCCCAAACTGAGAAGTGTTGCACCCCCTTGAAATGAGTGCATG Silene_schwarzenbergeri AGATAGAGACAAATAAGAATAACCAAACCACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGCTTAAAGAACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAACCCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGAATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAAAAAAAGAAAACCATATCGCAGCCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTAGATTCACGTAGAACATCACGCCACCACACAAACATGGTATATAGGAGAAAAAGAAGGCCCAAAATTATAAGTGTTGAACCCCCTTGAAATGAGTGCATG Silene_sorensenis ????????????????????????????CACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAACCCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAACCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAAGTCTTGCACCCCCTTGAAATGAGTGCAT? Silene_subconica ????????ACGAATAGGAATAACCAAACTACGTCCACAAAATGCCAGTACCAGGCAGCTGCTTCAAAGCCTACGTGATGTTCCTTGGTAAACGAACCTCGAAATTGTCGAATACCTGAGACAATCAAGAAGAGAGTTCCTATAATGACATGAAAGCCATGAAAGCCTGTTGCTAAGAAAAAGGTCGAACCATAGATGCTATCCGAAATAGTGAAGGGCGCTTGGAAATACTCCATTCCTTGAAATCCGGTGAAGACTAAAGCCATTAAAACAGTAGCTACTAAAGCGAAAACTGCGCGTTTTGACTTTCCCGCGAGTATCGCATGATGAGCCCACGTTACGGCTGCTCCGGATGAGAGAAGAATCATTGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACTAGAAGGCCTTTAGGCGGCCAAATACCTCCTATCTCTACTGCGGGCGCCAAAGAGGAATGAAAAAAAGCCCAAAAAAAGGCAAAAAAGAACATAACTTCAGAGACGATGAACAAAAGAAAGCCATATCGCAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCGCGCCACCACACCCACATAGTATAGAGGAGAAAAAGAATGCCCAAACTGAGCAGTATTTCACCGCCTTGAAATGCGTGCATG Silene_turkestanica AGATAGAGACAAATAAGAATAACCAAACCACGTCTACAAAATGCCAGTACCAAGCAGCAGCTTCAAAGCCAACGTGATGAGACTTGCTAAAAGAACCAAAATATTGACGAATACCACAGATAATCAAGAAAAGACTACCTATAAGCACATGAAAACCATGAAAGCCAGTTGCTAAGAAAAAAGTAGAACCATAAATACTATCAGAAATAGTAAAGGGAGCTTGATAATATTCCATCCCTTGAAAGCCAGTGAAGACCAGAGCCAGTAAAACAGTAGCTACTAAAGCGTAAACAGCACTCTTTTGCTTACCCGCCAGTATAGCATGATGAGCCCAAGTTACGCCAGCTCCAGATGAAAGAAGAATCAGTGTATTCAGAAAAGGGATTTCCCAAGGATCTAAAACAAAGATACCTTTTGGGGGCCAAATACCTCCTATCTCTATTGCAGGTGCCAAAGACGAATGAGAGAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAAGAAAAGAAAGCCATATCGCAGTCCTAATTGTACTACTTTGGTATGATGTCCTTCTAATGTGGATTCGCGTAGAACATCCCGCCACCACACAAACATGGTATAGAGGAGAAAAAGAAGGCCCAAAGTCAGAAGGTATTCACCCCCTTCAAATGAGTGCATG Silene_uniflora AGATAGAGACAAATAAGAATAACCAAACCACGTCTACAAAATGCCAGTACCATGCAGCAGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAACCCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAAGTGTTGCACCCCCTTGAAATGAGTGCATG Silene_vulgaris_1v ???????????????????????????????????????????CCAGTACCATGCAGCAGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAACCCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAA????????????????????????????? Silene_vulgaris_30v ???????????????????????????????????????????CCAGTACCATGCAGCAGCTTCAAAGCCAACGTGATGTTCCTTGGTCAGATGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAACCCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAA????????????????????????????? Silene_vulgaris_37v ???????????????????????????????????????????CCAGTACCATGCAGCAGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAACCCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGAGAAAAAGAAGGCCCAAACTGAGAA????????????????????????????? Silene_vulgaris_sv03 ???????????????????????????????????????????CCAGTACCATGCAGCAGCTTCAAAGCCAACGTGATGTTCCTTGGTCAGATGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAACCCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCCAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAA????????????????????????????? Silene_vulgaris_sv06 ???????????????????????????????????????????CCAGTACCATGCAGCAGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAACCCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAAGGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAA????????????????????????????? Silene_zawadzkii ???????????????????????????CTACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTTAAAGAACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAACCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCTAAACTGAGAAGTCTTGCACCC?????????????????? Viscaria_alpina AGATAGAGACAAATAAGAATAACCAAACCACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGACGATGAACAAAAGAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAAGTGTTGCACCCCCTTGAAATGAGTGCATG Viscaria_vulgaris ????AGAGACAAATAAGAATAACCAAACCACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGTTCCTTGGTCATCTGACCAAAATATTGGCGAATACCACATATAATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCAGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTGAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTTTTGCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGAAGAATAAGGGTATTAAGAAAAGGGATTTCCCAAGGATCTAAAACCCAAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAGAAAAAGCCCAAAAAAAAGCAAAAAAGAACATAACCTCCGAGATGATGAACAAAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCTAACGTGGATTCGCGTAGAACATCACGCCACCACACAAACATGGTATATAGGATAAAAAGAAGGCCCAAACTGAGAAGTGTTGCACCCCCTTGAAATGAGTGCATG ; END; BEGIN TREES; Title cox3_TB; LINK Taxa = taxa; TRANSLATE 1 Agrostemma_githago, 2 Atocion_lerchenfeldianum, 3 Beta_vulgaris, 4 Eudianthe_laeta, 5 Heliosperma_pusillum, 6 Lychnis_coronaria, 7 Petrocoptis_pyrenaica, 8 Silene_acaulis, 9 Silene_akinfievii, 10 Silene_ammophila, 11 Silene_conica, 12 Silene_coniflora_D, 13 Silene_coniflora_S, 14 Silene_conoidea, 15 Silene_davidii, 16 Silene_fruticosa, 17 Silene_integripetala, 18 Silene_latifolia_ASCH, 19 Silene_latifolia_BAR, 20 Silene_latifolia_SDG, 21 Silene_littorea, 22 Silene_lydia, 23 Silene_macrodonta, 24 Silene_multinervia_P, 25 Silene_multinervia_S, 26 Silene_noctiflora, 27 Silene_pendula, 28 Silene_pygmaea, 29 Silene_samia, 30 Silene_schafta, 31 Silene_schwarzenbergeri, 32 Silene_sorensenis, 33 Silene_subconica, 34 Silene_turkestanica, 35 Silene_uniflora, 36 Silene_vulgaris_1v, 37 Silene_vulgaris_30v, 38 Silene_vulgaris_37v, 39 Silene_vulgaris_sv03, 40 Silene_vulgaris_sv06, 41 Silene_zawadzkii, 42 Viscaria_alpina, 43 Viscaria_vulgaris; TREE COX3_MB_con_50_majrule = (3:0.160824,4:0.035674,((1:0.050085,2:0.033815,((6:0.038754,19:0.044828)0.65:0.038434,43:0.034491,18:0.018905,20:0.019312)0.62:0.035384,7:0.01738,(42:0.017583,9:0.01764)0.57:0.029197,((8:0.01931,((16:0.07659,31:0.086586)1.00:0.152952,(26:0.055298,34:0.026317)1.00:1.145069,((((10:0.105978,(11:0.044039,33:0.111685)1.00:0.12052)1.00:0.249275,23:0.118608)1.00:0.172232,22:0.318855)0.81:0.125145,(12:0.019781,13:0.020396)1.00:0.340986,14:0.146531)1.00:1.227249,(25:0.017709,24:0.016596)1.00:0.108905)0.88:0.050975)0.68:0.045504,41:0.095954)1.00:0.120086,((15:0.017604,32:0.018167)0.98:0.051292,17:0.01777,(27:0.044776,(35:0.017259,36:0.019241,(37:0.019149,39:0.036966)1.00:0.057283,38:0.027432,40:0.018899)0.83:0.036137)0.89:0.038295,29:0.082604)0.78:0.034022,21:0.017671,(28:0.04353,30:0.046896)0.85:0.044739)0.75:0.035538,5:0.039486)0.85:0.038681); TREE COX3_BS_PAUP_1 = (3,1,2,4,5,6,7,42,43,((8,((16,31),(((26,34),((((10,(11,33)),23),((12,13),14)),22)),(25,24)))),41),9,(15,32),17,18,19,20,21,27,28,29,30,35,36,(37,39),38,40); END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 674; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 674; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 674; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1295560969600; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 4273613997834695360; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 4199656493216048097; mqVersion 273; checksumv 0 2 4133672335 null getNumChars 674 numChars 674 getNumTaxa 43 numTaxa 43 short true bits 15 states 15 sumSquaresStatesOnly 488088.0 sumSquares 488088.0 NumFiles 1 NumMatrices 1 errorReportedDuringRun; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 329; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1033 532; setLocation 123 71; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; endTell; end;