#NEXUS [written Thu Jan 20 16:36:22 EST 2011 by Mesquite version 2.73 (build 544) at dhcp128036177160.central.yale.edu/128.36.177.160] BEGIN TAXA; TITLE TaxaForAnalysisStep6810; DIMENSIONS NTAX=58; TAXLABELS Atocion_rupestre_13547_FJ383913 Eudianthe_laeta_1341_AJ629284 Lychnis_chalcedonica_2487_AJ629286 Lychnis_coronaria_7484_AJ629287 Lychnis_floscuculi_2406_AJ629288 Petrocoptis_pyrenaica_2486_AJ629289 Petrocoptis_pyrenaica_2875_FJ376880 Silene_akinfievii_6897_04301 Silene_ammophila_12639_03155 Silene_aprica_7570_00632 Silene_aprica_7570_00633 Silene_conica_E_02976 Silene_conica_O_AJ629293 Silene_coniflora_S_04303 Silene_coniflora_Z_04292 Silene_conoidea_12655_02098 Silene_davidii_13374_02634 Silene_davidii_13374_02635 Silene_diclinis_DIC_7_g04582 Silene_diclinis_DIC_7_t02852 Silene_dioica_D184_24_L02850 Silene_dioica_D184_24_S03161 Silene_elisabethae_2470_02942 Silene_fedtschenkoana_12132_04294 Silene_fruticosa_1064_AJ629294 Silene_heuffelii_H4_6_02857 Silene_integripetala_1920_02364 Silene_latifolia_L121_9_03113 Silene_latifolia_L170_10_02855 Silene_latifolia_L200_2_03119 Silene_latifolia_L81_9_A03112 Silene_latifolia_L81_9_B03337 Silene_littorea_13501_ Silene_lydia_L_04359 Silene_lydia_S_04326 Silene_macrodonta_13984_03101 Silene_marizii_M4_1_A02860 Silene_marizii_M4_1_B03096 Silene_multinervia_P_02103 Silene_multinervia_R_04361 Silene_multinervia_S_02943 Silene_nigrescens_KGB217_AJ629298 Silene_noctiflora_O_02975 Silene_noctiflora_P_04109 Silene_pendula_12654_A03097 Silene_pendula_12654_B02097 Silene_pseudoatocion_7821_ Silene_pygmaea_13772_03486 Silene_quadriloba_12438_02102 Silene_samia_7822_02514 Silene_schafta_7615_ Silene_stellata_6374_01440 Silene_subconica_1033_03489 Silene_turkestanica_12484_03156 Silene_uniflora_2403_00589 Silene_viscosa_7705_02994 Silene_vulgaris_6459_00868 Silene_zawadzkii_2447_AJ629306 ; END; BEGIN CHARACTERS; TITLE RPA2_dna; DIMENSIONS NCHAR=2533; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Atocion_rupestre_13547_FJ383913 ?????????????????????CATGCATTTCCTTCTAGGATGACTATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAACTACGTGTCTTTATATATGGCCTTTTATATCTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTAATGTTCTTTATTTTCTATTAAGATAGCCAAAATAACATTTTTTATTT---------ATTTGGCCTTTT-CTATC--CTCACTGATTATTTACCGCTA--------TAATGTTTCCGGACATCTGCTTAAG-CATTT-CCAACAAATA-ACACTGAAGCATACAAATA--------GTTACCCTTTGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTAAGCTT-TTAATCGTGTGTGAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGTCTCTTGT-------GAATTAACTTCCTGGTTTCTATTCTGGGGTGTCCGTTRATTCTTTTTTTTCTT---------------CTTATGTTATTCGTGGTCATTATGGTCTATGT--------------TACTAGATCCATCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATGT------TCATCTCAGTTTGTTGCTTATTAT--GTGTAAAATAAACTATAAATTATCATG-------AACAT--RGGATAA-----CWCAATTT----AAGCTCCCTGGGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATGGCTGT--------GGCTTATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTATATTTATT----ATCTCTTAC-TTCTTTCTGTAGGGTGGTAGTTTGCGWGGAAAATTTGTTGATGCAACACCATTTGAGGACTCTTTGAAGAAGGATGGAGAGTGTGGATCTGATTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTTAATAGATATGGTACTG????????????????????????????????????????? Eudianthe_laeta_1341_AJ629284 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATATGYCTGTTTCTATTTGGCGTTCTATATTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTCTTTATTTTCTACTAAGGTAGCCAGCATAACAAATTTTTT-----------ATTTGGCCTTTT-CTATTCTCTCACTGATTTTTGACCTCTA--------TA------CCGGATAACTACTGCAA-CATTT-CTGACAAATACACACTGAAGCATAAAAATA--------GTTACCCTTTGAACTTTAAAA-------TATT-GTAGAATGAAA-----------------TTAAGCTT-TTAATCTTGTGGGAAGTGAAAACACATAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTACTGGTTTCTATTCTGGGGGCGTCCGCTAATCCTTTTCTTTTTT--------------CTTAAGTTATTCGTGGTCATTGTGGTCTGTGA--------------TCCCAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATGT------ACATCTCAGTTTGTTGCTTATTATCTGTGTAAAATATACTAGAAAGTATCGTG-------AGCATAGAGGATAA-----CTCAATTC----AAGCTCCCTTATGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATCAAAGCATTATTTTTAAG----ATCTCTTACATTCTTGC-GTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACTCCGTGAAGAAGGATGGAGAGAGTGGATCCGAGTCGCCTTCGCTT---GATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAATTAACATGT Lychnis_chalcedonica_2487_AJ629286 ???????????????????????????????????????????????????????????GGAATCCATTGCTTCCAAGGTAA-TATGTCTCTTTCTATTTGGCCTTTTATATCTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT---------------CCGTCTTTTTTATCCTCTCACTGATTATTGACCGCTA--------TAATGTTTCCGGATATGTGCTTCAACCATTT-CCGAGAAATACACACTGAGGCATACAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAAAATGTTGTAGAATGGAATTCGGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCTGTTTTTTT------GAATAAACTTCCTGGTTTCTATTCTGGGGGTATCCACTAATCCTTTTTTT----------------ACCTCAAGTTATTCATGGTCATTG-AGGTTGTGA--------------TCCTAGATCATTCATC-AACTTTTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATCT------ACATCTC-------------------------------------AGTATCGTG-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGTATTAGATTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCCACACCATTTGAGGACGCCTTGAAGAAGGATGAAGAGTGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACGCGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACTGAATTAACATGC Lychnis_coronaria_7484_AJ629287 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATATG--TCTTTCTATTTGGCCTTTTATGTCTTTATTAGGGTGCTGATTTTCGCAGTACGCATTTTACTTGTTACAGTACACTTTGGACAATTTTACCCCTCATTTTTTTCTCCTCTCTACCACCCAATTGTACTACAGTGATAACAAAACAAAAAAAAAAGAAAATCCCCAAAAACTCACGCAACACATCAAAATTATAGTGGGTAAAGGTACTCTTGTGACAATTAGTCAAGCAATTTGATTAATTTGAATGAAAATCTTGTAAACAAATTATTTTACGCTTGAGATTTATTGATAAAAATCTATTCAGATCAACTCCGTACATGGTACATGTGTTACTCCCTTGTAAAAGGTTTTTAAAGTGTAACAATTAAACTTAGTGCATAACTGCWTGACGACGAACGAATGGAGAATCATTTATACTTTTATATCTCAGCAGATGATGATGCATCATCAATGAATATCAAAAGTAAAGTCCTAAGCCAGATCATTCGTGAATAGTGAATATCACTGT?GTGATTAAAACAAGAAAATCTTTATAAACCATAAGACCAGAACATTATTACTTTTGMTAACTAATTTTGCATTACCTAATTAAAAACCATGTTTGGAGATTCCAATTATCATCTATAATTGAAAAAAAGATTATTAATTTGAGAGGTTATAGGGTTAGATATTGAAAGAATTAGGTTTAGAGATTTTTTCTATTAGGGGTATGATGCGAAAATAAATTACGCTTTATTAATGTTCTTTATTTTCTACTAAGGTAGTCAAAATAACATTTTTTTC---------------CGTCTTTT-CTATCCTCTCACTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTAAAACATTT-CCGAGAAATACACACAGAAGCATATAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-ATAGAATGGAA-----------------TTCGGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTGTTTTTT-------GAATAAACTTCCTGGTTTCTATTCTGGGGGTGTCCACTAATCCTTTTTTTTT---------------CCTCAAGTTATTCATGGTCATTG-AGGTTGTGA--------------TCCTAGATCATTCATC-AACTTTTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTATCT------ACATCTC-------------------------------------AGTATCGTCAACCTTGAACAT--AGGATTA-----CTCAATTT----AAGCTCCCTTAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGATTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGCAGTTTGCGTGGAAAATTTGTTGATGCCACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGTGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACTGAATTAACATG? Lychnis_floscuculi_2406_AJ629288 CCTGATCTTATTATGAACCCACATGCGTTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAA-TATG--TCTTTCTATTTGGCCTTTTATATCTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTAGTCAAAATAACATTTTTTTT---------------CGTCTTTT-CTATCCTCTCACTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTAAAACATTTAACGAGAAATACACACTGAAGCATACAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTTAATAGAATGGAA-----------------TTCAGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTGTTTTTT-------GAATAAACTTCCTGGTTTCTATTCTGAGGGTGTCCACTAATCCTTTTTTTT----------------CCTCAAGTTATTCATGGTCATTG-AGATTGTGA--------------TCCTAGATCACTCATC-AACTTTTCTGATACGAGTACGGAAGCGAATTAAATAAAATAATGATGTTTTTGCTAGGGATCGAACTCGAGACTCGTGAGATCGAGGGACAAGTTTGATTCCGTGAGGATATTTAACTAAAAGTCCACCTAGACTTTCTATAATCTGAACCCTTGTTCGATCCCTACTGAATAATTTAATCAACAATATTCGTATCATTTTCTTTCTATCT------ATATCTC-------------------------------------AGTATCGTCAATCGTGAACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGATTTATTTATTATCTCTTTACTTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCCACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGTGTGGATCTGAGTCACCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCTGCACACGGGTTCAATAGATATGGTACTGAAGTAT??????????????????????????????????? Petrocoptis_pyrenaica_2486_AJ629289 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACGTCTGTTTCTATTTGGCCTTTTATATCTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCTCTTTATTTTCTACTTAGGTAGCCAACATAACATTTTTTT------------ATTTGGCCTTTTTTTATTCTCTCACTGATTATTGACCTCTA--------TAATGTTTCCGGATATCTGCTTAAA-CATTT-CCAACAAATACCCACTGAAGCATACAAATA--------GTTATCCTTTGAACTGTAAAA-------TGTT-GGAGAATGAAA-----------------TTAAGCTTCT-AATCTTAAGTTGAGAAAGAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTAT-------GAATAAACTTCCTGGTTTCTAATCTGGGGGTGTCCACTAATCCTTTTTTT------------------CTCAAGTTATTCGTGGTCATTATGGTCTGTGA--------------TGCCAGATCATTCATC-AATGTATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTGT------ACATCTCATTTTGTTGATTATTATTTGTGTAATATTAACTGGGAGGTATCGTG-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCCTCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTATATTTATT----ATCTCTT-----CTTGCTGTAGGGTGGTAGTTTGAGTGGAAAATTTGTTGACGCAACACCATTTGAGGACTCCTTGAGGAAGGATAAAGAGTGTGGATCTGAGTCACCTTCACTTGTTGATGAACTTGGCTCCATGTTAGCAGAACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAATTAACATGT Petrocoptis_pyrenaica_2875_FJ376880 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACGTCTGTTTCTATTTGGCCTTTTATATCTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCTCTTTATTTTCTACTTAGGTAGCCAACATAACATTTTTTT------------ATTTGGCCTTTTTTTATTCTCTCACTGATTATTGACCTCTA--------TAATGTTTCCGGATATCTGCTTAAA-CATTT-CCAACAAATACCCACTGAAGCATACAAATA--------GTTATCCTTTGAACTGTAAAA-------TGTT-GGAGAATGAAA-----------------TTAAGCTTCT-AATCTTAAGTTGAGAGAGAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTAT-------GAATAAACTTCCTGGTTTCTAATCTGGGGGTGTCCACTAATCCTTTTTTT------------------CTCAAGTTATTCGTGGTCATTATGGTCTGTGA--------------TGCCAGATCATTCATC-AATGTATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTGT------ACATCTCATTTTGTTGATTATTATTTGTGTAATATTAACTGGGAGGTATCGTG-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCCTCCTGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTATATTTATT----ATCTCTT-----CTTGCTGTAGGGTGGTAGTTTGAGTGGAAAATTTGTTGACGCAACACCATTTGAGGACTCCTTGAGGAAGGATAAAGAGTGTGGATCTGAGTCACCTTCACTTGTTGATGAACTTGGCTCCATGTTAGCAGAACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAATTAACATGT Silene_akinfievii_6897_04301 ???????????????????????????TTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTTGTTGATAATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGTTGTCCACGAATCCTTTTTTTT--------------CTCCTTAAGTTATTCATCGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT-------AG-----GTCATTGT---------------GGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_ammophila_12639_03155 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAATTACG-CTCTTTCTATTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTAGTCAAAATAACATTTTTTT------------ATTTGGCATTTT-CTATCCTCTCGCTTATTATTGACCGCTA--------TAATATTTCCGGATATTTGCGTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAW-------TGTT-GTAGAATGGAA-----------------TTTGGCTTCTTAATCT-ACATGAAGAGAAAACATGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAGCTTCCTGGTTTCTATTCTGGAGGTGTCGACGAATCCTTTTTTT-----------------CCTTAAGTTATCCATGGTCATTGTGGTCTGTTA--------------TCCTAGATCATTCATC-GACTTATCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCTTA-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTTTT?---ATCTCTTAC-TTCTTTCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAGCTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACCGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_aprica_7570_00632 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTATTTATTTTCTACTATGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAW-------TGTT-GTAGARTGGAA-----------------TTCGGCTTCTTAATCT-GCGTGAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTGTTCTGGAGGTGTCCACGAATCCTTTTTTTT----------------CCTTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATTATTCATC-AACTTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGTGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_aprica_7570_00633 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTATTTATTTTCTACTATGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCATCTCGCTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CTGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAAC----------------------------AT-----------------TTTGGCTTCTTGATCT-GCGTGAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCACGAGTCCTTTTTTTT----------------CCTTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-GACTTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATTTC-------------------------------------AGTTTCGTG-------AACAT--AGAATAA-----CTCAATTT----AAGCTCCCTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTAC-TTGTTGCAGTAGGGTGGTAGTTTGTGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_conica_E_02976 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAATTACG-CTCTTTCTACTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTAGTCAAAATAACATTTTTTT--------------TTGGCATTTT-CTATCCTCTCGCTTATTATTGACCGTTA--------CAATGTTTCCGGATATCTGCGTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-ACATGATGAGAAAACATGTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAGCTTCCTGGTTTCTATTCTGGAGGTGTCCACGAATCCTTTTTTT-----------------CCTCAAGTTATCCATGGTCATTGTAGTCTGTTA--------------TCCTAGATCATTCATC-GACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCTTA-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTTTT----ATCTCTTAC-TTCTTTCTGTAGGGTGGTAGTTTGCATGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACGGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_conica_O_AJ629293 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAATTACG-CTCTTTCTACTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTAGTCAAAATAACATTTTTTT--------------TTGGCATTTT-CTATCCTCTCGCTTATTATTGACCGTTA--------CAATGTTTCCGGATATCTGCGTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-ACATGATGAGAAAACATGTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAGCTTCCTGGTTTCTATTCTGGAGGTGTCCACGAATCCTTTTTTT-----------------CCTCAAGTTATCCATGGTCATTGTAGTCTGTTA--------------TCCTAGATCATTCATC-GACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCTTA-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTTTT----ATCTCTTAC-TTCTTTCTGTAGGGTGGTAGTTTGCATGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACGGAAGTATTGTATAGTGGAGTTTATGGCACCGAG????????? Silene_coniflora_S_04303 ?????????????????????????????????????????????????????GCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCAACGAAGGTAGTCAAAATAACTTTTTTTTT-----------ATTTGGCATTTT-CTATCCTCTCGCTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCGTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-ACATGAAGAGAAAACATGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCATGAATCCTTTTTTT-----------------CCTTAAGTTATTCATGGTCATTGTGGTCTGTTA--------------TCCTAGATCATTCATC-GACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTTGTA-------AACAT--AGGATAA-----CTCAATTT----AAGCTCTCTTAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACCGAAGTACTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_coniflora_Z_04292 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCAACGAAGATAGTCAAAATAACTTTTTTTTTTT---------ATTTGGCATTTT-CTATCCTCTCCCTGATTATTGACCGCTA--------TAATGTTTCTGGATATCTGTGTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-ACATGAAGAGAAAACATGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCATGAATCCTTTTTTT-----------------CCTTAAGTTATTCATGGTCATTGTGGTCTGTTA--------------TCCTAGATCATTCATC-GACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTTGTA-------AACAT--AGGATAA-----CTCAATTT----AAGCTCTCTTAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACCGAAGTACTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_conoidea_12655_02098 ???????TTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACT--------------------------------------------------------------------------------------------------------------------------------------GAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-ACATGAAGAGAAAACATGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTATTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCACGAATCCTTTTTTT-----------------CCTTAAGTTATTCATGGTCATTGTGGTCTGTTA--------------TCCTAGATCATTCGTC-GACTTATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTTGTA-------TACAT--AGGATAA-----CTCAATTT----AAGCTCTCTTAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTTTT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCCGCACACGGGTTCAATAGATATGGTACCGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_davidii_13374_02634 ??????????????????????????????????????????????????????????????????????????????????ATACG-CTCTTTCTATTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTGGCCAAAATAACATTTTTTTTT----------ATTTGGCCTTTT-CTAYCCTCTYGCTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTATAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCACGAATCCTTTTTTT---------------CCCCTTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGTGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTG?????????????????????????? Silene_davidii_13374_02635 ???????????????????????????????????????????????????????????????????????????????????TACG-CTCTTTCTATTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTGGCCAAAATAACATTTTTTTTT----------ATTTGGCCTTTT-CTAYCCTCTYGCTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTATAAAA-------TGTT-GTAGAATGGAA-----------------TTCGTCTTCTTAATCT-GCGTGAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCACGAATCCTTTTTTTT--------------CCCCTTAAGTTATTCATGGTCATTGTAGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGTGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGTACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTG?????????????????????????? Silene_diclinis_DIC_7_g04582 ????????????????????????????????????????????????????????????????????????????AGGTAAATATG-CTCTTTCTATTTGGC-TTTTATATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGTCCG-TA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATAGAA-----------------TTCGGCTTCTTAATCT-GCGTGGAGAAAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTTGACTTTTGAACAAACTTCCTGGTTTATATTCTGGAGATGTCCACGAATTCTTTTTTTTTTTTTT?-------CTCCYTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGTTAC-----CTCAATTTT---AAGCCCCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTAT--------GGCTCATCCAGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGTATGAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGT??????????????????????????????????????????????????????????? Silene_diclinis_DIC_7_t02852 ????????????????????????????????????????????????????????????????????????????AGGTAAATATG-CTCTTTCTATTTGGC-TTTTATATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGTCCG-TA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATAGAA-----------------TTCGGCTTCTTAATCT-GCGTGGAGAAAAAACACTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTTGACTTTTGAACAAACTTCCTGGTTTATATTCTGGAGATGTCCACGAATTCTTTTTTTTTTTTTT?-------CTCCYTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGTTAC-----CTCAATTTT---AAGCCCCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTAT--------GGCTCATCCAGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGTATGAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGT??????????????????????????????????????????????????????????? Silene_dioica_D184_24_L02850 ???????????????????????????????????????????????????????????????????????????????????TATG-CTCTTTCTATTTGGC-TTTTATATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCCCGCTGATTATTGTCCG-TA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGGAGAAAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTATATTCTGGAGATGTCCACGAATTCTTTTTTTT---------------CTCTCAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGTTAC-----CTCAATTTT---AAGCCCCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTAT--------GGCTCATCCAGACGAAAATGGATCCTCTCCATTTATTTCTCTCCATTTCCTCTCCATTTTCTCTCTTAAACTCATTTAATAATATTATTCTCACCAAACCCCATTATCCCTTTATTTTTATCCATAAATTTTGAGCCGTTCGATGATGCCAGAATACGATCTGGACCACCGAAAGGAAATGGCCTCTCCATTTCTTAAAAGGAAATGGAGAGAAACTCTCCTCCATCCAGACATATCAAAGTATGAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_dioica_D184_24_S03161 ???????????????????????????????????????????????????????????????????????????????????TATG-CTCTTTCTATTTGGC-TTTTATATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGTCCG-TA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAATCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGGAGAAAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTATATTCTGGAGATGTCCACGAATTCTTTTTTTTTTT-----------CTCCTTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAC-----CTCAATTTT---AAGCCCCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTAT--------GGCTCATCCAGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGTATGAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_elisabethae_2470_02942 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTTGCTGATAATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------CGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGTTGTCCACGAATCCTTTTTTTTT---------------CCTTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT-------AG-----GTCATTGT---------------GGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_fedtschenkoana_12132_04294 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCT---AAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCACGAATCCTTWTTTT----------------TCCTTAAGTTATTCATGGTCACTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGTGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGG???????????????? Silene_fruticosa_1064_AJ629294 CCTGATCTTATTATAATCCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCGTCCAAGGTAA-TACAACTCTTTCTATTTGGCCTGTTATATTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTATGGTAGCCGCAATAACATTTTTTT------------ATTTGGCCTTTT-CTATCCTCTCACTGGTTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTCAAA-CATTT-CCAACAAATACACACTGAAGCATACAAATA--------GTTTCTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGTTTTATGATCTTGTTTGAAGAGAGAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTAT-------GAATAAGGTTCCTGGT------------GGTGTCCACTGATCCTTTTTT-----------------CCCTTAAGTTATTCGTGGTCATTGTGGTCTGTTA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGATCT------ACATCTCAATTTGTTGCT--TTATTTGTGTAAAATAACCTAGGAAGTATTGTG-------AACAT--AGGATAA-----CTCAGTTT----AAGCTCCCTTAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGTTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGATTTATTT---ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACTCCTTGAAGAAGGATGGAGAGTGTGGATCTGAGTCGCCGTCGCTTGTTGATGAACTTGGCTCAATGTTAGCAGAACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAATTAACATGT Silene_heuffelii_H4_6_02857 CCTGATCTTATTATAAACCCACATGCATTTCCTT?TAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATATG-CTCTTTCTATTTGGC-TTTTATATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGTCCG-TA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGGAGAAAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTATATTCTGGAGATGTCCACGAATTCTTTTTTTTTT?-------------CCTTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAC-----CTCAATTTT---AAGCCCCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTAT--------GGCTCATCCAGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGTATGAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTG?????????????????????????? Silene_integripetala_1920_02364 ?????????????????????????????????????????????????????GCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATATGGGCTTTCATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTGTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT----------AATTTGGCCTTCT-CTATCCTCTCACTGATTATTGACCGCTA--------TGACGTTTTTGGATATCTGCTTACA-CATTT-CCGTCAAATACACACTGAAGCATAGAWATA--------GTTACTCCTGGAAC--------------TGTTTGTAGAATGGAA-----------------TTTGGTTTCTTAATCT-GCGCGAAGAGAAAACRCGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTCCCTCATTTGTATTCTGGAGGTGTCCACGAATACTTTWTTTTT--------------YCCTTAAGTTATTCATGGTCATTGGGGTCTGTTA--------------TCCTAGACCATTCATC-MAATTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--ATGATAA-----CTCAATTT----AAGCTCCCTTAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GACTCATCCGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATWTCAAAGCATTAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCATGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCACCTTCGCTTGTTGATGAACTTGGTTCCATGCTAGCAGCACACGGGTTCAATAGATATGGTACTGAAG?????????????????????????????????????? Silene_latifolia_L121_9_03113 ?????????????????????????????????????????????????????????????????????????????????AATATG-CTCTTTCTATTTGGC-TTTTATATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGTCCG-TA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGGAGAAAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTATATTCTGGAGATGTCCACGAATTCTTTTTTTTTTTTTTTTTTTTT?CTCCTCAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGGTAC-----CTCAATTTT---AAGCCCCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTAT--------GGCTCATCCAGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGTATGAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGAACACGGGT??????????????????????????????????????????????????????????? Silene_latifolia_L170_10_02855 ????????????????????????????????????????????????????????????????????????????AGGTAAATATG-CTCTTTCTATTTGGC-TTTTATATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGTCCG-TA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAGTA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGGAGAAAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTATATTCTGGAGATGTCCACGATTTTTTTTTTTTTT?-----------CTCCTTAAGTTTTTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGTTAC-----CTCAATTTT---AAGCCCCCTTAGGTCTGAATGTCTGATGGCCAGGGGCGGACCCACCTAGTAGCAACAGGTGGCGGCTGCTACCCCAAATATAAAAAAAAAAAAATAGTTTAGAAGACCGATTTTTGCTACCCAATTATTGTTGAATAGTAGATAAATAAATATTACGGAGTGTTCCGCTAAATCTTCAAGAAATAGCTTGTGGTTCAATGGTAAAAGCTTTGGTTTTCCACCAATTGCCCCAGGTTCGAATCCCTTCACATGCATATATAGACTATTTTTTTTGCTATCCTATACATTAAATCCTAGGTCTGCCCCTGCTGATGGCTAT--------GGCTCATCCAGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGTATGAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGT??????????????????????????????????????????????????????????? Silene_latifolia_L200_2_03119 ????????????????????????????????????????????????????????????????????????????AGGTAAATATG-CTCTTTCTATTTGGC-TTTTATATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGTCCG-TA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGGAGAAAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTATATTCTGGAGATGTCCACGAATTCTTTTTTTTTTTTTTTTTTTTT?CTCCTCAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGGTAC-----CTCAATTTT---AAGCCCCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTAT--------GGCTCATCCAGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGTATGAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGAACACGGGT??????????????????????????????????????????????????????????? Silene_latifolia_L81_9_A03112 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATATG-CTCTTTCTATTTGGC-TTTTATATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGTCCG-TA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGGAGAAAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTATATTCTGGAGATGTCCACGGATTCTTTTTTTTT-------------CTCCTTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGG?TAC-----CTCAATTTT---AAGCCCCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTAT--------GGCTCATCCAGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGTATGAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGT?????????????????????????????????????????????????????????????????????????? Silene_latifolia_L81_9_B03337 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATATG-CTCTTTCTATTTGGC-TTTTATATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGTCCG-TA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGGAGAAAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTATATTCTGGAGATGTCCACGAAT------------------------------------TTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGG?TAC-----CTCAATTTT---AAGCCCCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTAT--------GGCTCATCCAGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGTATGAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGT?????????????????????????????????????????????????????????????????????????? Silene_littorea_13501_ ??????????????????????????????????????????????????????????????????????????????????ATACA-CTCTTTCTATTTGGCCTTTTATATCTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTCTTTG----CTACTAAGGTAGCCAAAATTACATA-------------------------------------CTCGCTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGTATAGAAATA--------GTTACCCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------CTCGGCTTCTTAATCT-GCGTGAAGAGAAAACATGTAACCAGTGGTGGATCTAGGGGGGGGGGGG??????????????????????????????TTGAGATTTTTGAATTTTTAGTTGCATTTTTCCAAAAAAAATTCGGGTGTGCCTTACATTATTACCATTCGCCCCCCCTAAAATTTTTTCGCCCCCCCGAGCTTAATTCCTGGCTCTGCCACCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGAAGGTGTCCCTTTCATTTTTT--------------------CCTTAAATTATTCATG-TCATTGTGGTCTGTGATCCTAGATCCTAGATCCTAGATCATTCATCTAACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAA-------AG-----GTCATTGT---------------GGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCTAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCAGTAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCATGGAAAATTTGTTGATGCAACACCATTTGAAGACGCCTTGAAGAAGGATAGAGAGGGTGGATCTGAGTCACCTTCGCTTGT?????????????????????????????????????????????????????????????????????????????????????????????? Silene_lydia_L_04359 ???GATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTT----CTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGCTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCGTACA-CATTT-CCGACAAATAAACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAAAGGAA-----------------TTCGGCTTCTTAATCT-GCGGGAAGAGAAAACATGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCACGACTCCTTTTTTT-----------------CCTTAAGTTATTCATGGTCATTGTGGTCTGTTA--------------TCCTAGATCATTCATC-GACCAATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AATTTTGTG-------AACGT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCGTTAGATTTTTT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGATTTAACATGC Silene_lydia_S_04326 ?????????????????????????????????????????????????????????????????????GCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTT----CTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGCTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCGTACA-CATTT-CCGACAAATAAACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAAAGGAA-----------------TTCGGCTTCTTAATCT-GCGTGAAGAGAAAACATGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCACGACTCCTTTTTTT-----------------CCTTAAGTTATTCATGGTCATTGTGGTCTGTTA--------------TCCTAGATCATTCATC-GACCAATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AATTTTGTG-------AACGT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCGTTAGATTTTTT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGATTTAACATGC Silene_macrodonta_13984_03101 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAATTATG-CTCTTTCTATTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTAGTCAAAATAACATTTTTTT------------ATTTGGCATTTT-CTATACTCTCGCTTATTATTGACTGCTA--------CAATGTTTCCGGATATCTGCGTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-ACATGAAGAGAAAACATGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------TAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCACGAATCCTTTTTTT-----------------CCTTAAGTTATTCATGGTCATTGTGGTCTGTTA--------------TCCTAGATCATTCATC-GACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCATA-------AACAT--AAGATAA-----CTCAATTT----AAGCTCCCTTATCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCACTAGGTTTTTT----ATCTCTTAC-TTCTTTCTGTAGGGTGGTAGTTTGCATGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACCGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_marizii_M4_1_A02860 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATATG-CTCTTTCTATTTGGC-TTTTATATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGTCCG-TA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGGAGAAAAAACATGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTATATTCTGGAGATGTCCACGAATTCTTTTTTTTT---------------CCTCAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGTTAC-----CTCAATTTT---AAGCCTCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTAT--------GGCTCATCCAGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGTATGAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATA????????????????????????????????????????????????? Silene_marizii_M4_1_B03096 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATATG-CTCTTTCTATTTGGC-TTTTATATCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGTCCG-TA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGGAGAAAAAACATGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTATATTCTGGAGATGTCCACGAATTCTTTTTTTTT------------CCTCCTTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGTTAC-----CTCAATTTT---AAGCCCCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTAT--------GGCTCATCCAGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGTATGAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATA????????????????????????????????????????????????? Silene_multinervia_P_02103 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTTCTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTCAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCACGAATCCTTTTTT---------------CTTCCTTAAGTTATTCATGGTCATTGTAGTCGGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCTATATCTACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATGCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTA----CTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAAGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCTGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_multinervia_R_04361 ???GATCTTATTGTAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTTCTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTCAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCACGAATCCTTTTTT---------------CTTCCTTAAGTTATTCATGGTCATTGTAGTCGGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCTATATCTACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATGCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTA----CTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAAGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCTGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_multinervia_S_02943 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTTCTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTCAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCACGAATCCTTTTTT---------------CTTCCTTAAGTTATTCATGGTCATTGTAGTCGGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCTATATCTACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATGCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTA----CTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAAGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCTGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_nigrescens_KGB217_AJ629298 ???????????????????????????????????????????????????????????GGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTGGCCAAAATAACATTTTCTTTTT---------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACCAACTTCCTGGTTTCTATTCTGGAGGTGTCCACGAATCCTTTTTTTTTT-------------CCCTTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACA-CTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGTGGGCCTGTGGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGTGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGA???????????????????????????????????????? Silene_noctiflora_O_02975 ????????????????????????????????????AGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAAGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-TTATCCTCTCGCTGATTATTGACCGCTA--------TAATGTTTCTGGATATCTGCTTACA-CATTT-CCGACAAATACACGCTGAAGCATAGAAATA--------GTTACTCTTGGAACTTTAAAA-------TGTT-GTAGAATGGAA-----------------TCCGGCTT----ATCT-GAGTGAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTATGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGGGTCCACGAATCCTTTTTT------------------CCTTAAGTTATTCATTGTCATTGTGGTCTGTGA--------------TCCTGGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAA-----CCCAATTC----AAGCTCCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGCTTATT----A----TTAT-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGCCGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGATCTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACTGAGTT??????? Silene_noctiflora_P_04109 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAAGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-TTATCCTCTCGCTGATTATTGACCGCTA--------TAATGTTTCTGGATATCTGCTTACA-CATTT-CCGACAAATACACGCTGAAGCATAGAAATA--------GTTACTCTTGGAACTTTAAAA-------TGTT-GTAGAATGGAA-----------------TCCGGCTT----ATCT-GAGTGAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTATGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGGGTCCACGAATCCTTTTTT------------------CCTTAAGTTATTCATTGTCATTGTGGTCTGTGA--------------TCCTGGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAA-----CCCAATTC----AAGCTCCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGCTTATT----A----TTAT-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGCCGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGATCTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACTGAGTTAACATGC Silene_pendula_12654_A03097 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATTTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTTGCCAAAATAACATTTTTTT-------------TTTGGCCTTTT-CAATCCTCTCGCTAATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATAGACACTGAATCATAGGAATAGCCGAATAGTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTTGGCTTCTTAATCT-GCGTGAAGAGAAAACACGTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCTGC------------------------------------------------------------------------------------------------------------------------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGTAGTAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_pendula_12654_B02097 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATTTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CAATCCTCTCGCTAATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATAGACACTGAAGCATAGGAATAGCCGAATAGTTACTCTTGGAACTGTAAAA-------TGTT-ATAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGAAGAGAAAACACGTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCTGC------------------------------------------------------------------------------------------------------------------------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACATCT------ACATC---------------------------------------AGTTTCGTG-------AACAT--AGGATAA-----ATCAATTT----AAGCTCGCTTAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_pseudoatocion_7821_ CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGAATGACCATTGCTATGCTTTTGGAATCCATTGCGTCCAAGGTAAATACATCTCTTTCTGTTTGGCCTGTTACATATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGTTCATTATTTTCTACAACGGT-GCCAAAATAACATTTTCTT------------ATTTGGCCTTTT-CTATCCTCCCACTGATTATTGACCGCTA--------TAATGTTTCTGGATATCTGCTCAAA-CATTT-CCAACAAATACACGCTGAAGCATACAAATA--------GTTTTTCTTGCAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGTTTTATAATCTTGTTTGAAGAGAGAATACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTAT-------GAATAAGGTTCCCGGTTTCCATTCTGGGAGTGTCCTCTAATCCTTTTTT----------------------------ACCTAGATCATTGTGGTCTGCTA------------TATCCTAGCTCATTCATC-AACTTATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGATCT------ACATCTCAATTTGTTGCTTATTATTTGTGTAAAATGAACTAGGAAGTCTTGTG-------AACAT--AGGTTAA-----CTCAGTTTAATTAACCTCCCTTAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGTCTGT--------GGCTCATATAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAATGCATTAGATTTATT----ATCTTTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACTCCTTGAAGAAGGATGGAGAGTGTGGATCTGAGTCGCCGTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGAACATGGGTTCAATAGATATGGTACAGAAGTATTGTATAGTGGAGTTTATGGCACCGAATTAACATGT Silene_pygmaea_13772_03486 CCTGATCTTATTATAAACCCACATGCATTCCCATCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCGTCCAAGGTAAATACATCTCTTTCTATTTGGCCTGTTATATTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATTTTTTATTTTCTACTACGGTGGCCAAAATAACATTTTTT-------------ATTTGGCCTTTT-CT----------------------------------------------------GCTCAAA-CATTT-CCAACAAATACACATTGAAGCATACAAATA--------GTTTCTCTTGGAACTGTAAAA----------------------------------------------------ATCTTGTTTGAAGAGAGAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTGTGTTAT-------AAATAAGGTTCCTGGTTTCTATTCTGGTGGTGTCCACTAATCCTTTTTT-----------------CCCTTGAGTTATTCGTGGTCATTGTGGTCTGTTA--------------TCCTAGATCATTGATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGATCT------ACATCTCAGTTTGTTGCTTATTATTTGTGTAAAATAAACTAGGAAGTATTTTG-------AACAT--AGGATAA-----CTCAGTTT----AAGCTCCCTTAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGATTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACTCCTTGAAGAAGGATGGAGAGTCTGGATCTGAGTCGCCGTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGAACACGGGTTCA???????????????????????????????????????????????????????? Silene_quadriloba_12438_02102 ????????????????????????????????????????????????????????????????????????????AGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACACTTTTTTTTT--------?ATTTGGCCTTTT-CTATCCTCCCGCTGATTATTGACCGCTAGTCCGCTATAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTCTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCACGAATCCTTTTTT----------------CCCCTTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCATCT------GCATCTC-------------------------------------AGTTTCGTT-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGACTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGTGTGGAAAATTTGTTGATGCAACACCATTTGAGGATGCCTTGAAGAAGGATGGAGAGGGTGGAT????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Silene_samia_7822_02514 ????????????????????????????????????????????CATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTGTTTGGCCTTTTATATTTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTA-----TACTACGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGACCGCTA--------TAATGTTTTCGGATATCTGCTTACA-CATTT-CCGGCAAATAGACACTGAAGCATAGGAATA--------GTTACTCTTGGAAGTTGGAACTGTAAAATGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGAAGAGAAAACGCGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCT--GTTTT-------GAACAAACTTCCCGGTTTCTATTCGGGAGGTGTCCACGAATCCTTTTTTT---------------CCCCTTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------GACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTAC-TTCTTGTTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCACTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGTTTCAATAGATATGGTACTGAAGTATTGTATAGTG?????????????????????????? Silene_schafta_7615_ CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCGTCCAAGGTAAATACATCTCTTTCTATTTGGCCTGTTATATTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATTCTTTATTTTCTACTACGGTAGCCAAAATAACATTTTTT-------------ATTTGGCCTTTT-CT----------------------------------------------------GCTCAAA-CATTT-CCAACAAATACACATTGAAGCATACAAATA--------GTTTCTCTTGGAACTGTAAAA----------------------------------------------------ATCTTGTTTGAAGAGAGAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTGTGTTAT-------AAATAAGGTTCCTGGTTTCTATTCTGGTGGTGTCCACTAATCCTTTTTT-----------------CCCTTAAGTTATTCGTGGTCATTGTGGTCTGTTA--------------TCCTAGATCATTAATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGATCT------ACATCTCAGTTTGTTGCTTATTATTTGTGTAAAATAAACTAGGAAGTATTTTG-------AACAT--AGGATAA-----CTCAGTTT----AAGCTCCCTTAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTCGATTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACTCCTTGAAGAAGGATGGAGAGTCTGGATCTGAGTCGCCGTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGAACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAATTAACGTGT Silene_stellata_6374_01440 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTGGCCAAAATAACATTTTTTTTTTTTTTTTTT-ATTTTGCCTTTT-CTATCCTCTCGCTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCCTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCACGAATACTTTTTTT---------------CCCCTTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCAAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTT-----CTTGCTGTAGGGTGGTAGTTTGTGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_subconica_1033_03489 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAATTACG-CTCTTTCTATTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTAGTCAAAATAACATTTTTTT------------ATTTGGCATTTT-CTATCCTCTCGCTTATTATT-------------------------AGGATATCTGCGTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-ACATGAAGAGAAAACATGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAGCTTCCTGGTTTCTATTCTGGAGGTGTCCACGAATCCTTTTTTTT----------------CCTCAAGTTATCCATGGTCATTGTGGTCTGTTA--------------TCCTAGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCTTA-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCAGATATATCAAAGCATTAGGTTTTTT----ATCTGTTAC-TTCTTTCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACCGAAGTATTGTATAGTGGAGTTTATGGCACTGAGTTAACATGC Silene_turkestanica_12484_03156 ????????????????????????????????????????????????????????????????????????????AGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAAGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-TTA?CCTCTCGCTGATTATTGAYCGCTA--------TAATGTTTCTGGATATCTGCTTACA-CATTT-CCGACAAATACATGCTGAAGCATAGAAATA--------GTTACTCTTGGAACTTCAAAA-------TGTT-GTAGAATGGAA-----------------TCCGGCTT----ATCT-GAGTGAAGAGAAAACACGTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTATGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGGGTCCACGAATCCTTTTTTT-----------------CCTTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTGGATCATTCATC-AACTTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTTGTG-------AACAT--AGGATAA-----CCCAATTC----AAGCTCCCTTAGGTCTGAATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGCTTATT----A----TTAT-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGATCTTGGCTCCATGT?????????????????????????????????????????????????????????????????????????? Silene_uniflora_2403_00589 CCTGATCTTATTATAAACCCACATGCATTCCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCGTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTTT----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGACCACTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATATAAATA--------GTTACTCTTGGAAATGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCCTGAAGAGAAAACACCTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAAGTTCCTGGTTTCTATTCTAGAGGTGTTTACAAATCCTTTTTTT---------------CCCCTTAAGTTATTCATGATTATTGTTGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCGTAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAAAAGCATTGGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGAAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_viscosa_7705_02994 CCTGATCTTATTATAAACTCACATGCATTTCCTTCTAGGATGACCATTGGTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCCTTCTATTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACACTTTTTTTTT---------ATTTGGCCTTTT-CTATCCTCCCGCTGATTATTGACCGCTAGTCCGCTATAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCGTGAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCACGAATCCTTTTTT----------------CCCCTTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCGTAGATCATTCATC-AACTTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCATCT------GCATCTC-------------------------------------AGTTTCGTT-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGACTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGTGTGGAAAATTTGTTGATGCAACACCATTTGAGGATGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_vulgaris_6459_00868 CCTGATCTTATTATAAACCCACATGCATTCCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCGTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTYTCGCTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTSCTTACA-CATTT-CCGACAAATACACACTGAAGCATATAAATA--------GTTACTCTTGGAAATGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCCTGAAGAGAAAACACCTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTAGAGGTGTCCACAAATCCTTTTTTT---------------CCCCTTAAGTTATTCATGATTATTGTTGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAA-----CTCAATTT----AARCTCCCGTAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATAAAAGCATTGGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGTGGTAGTTTGCGTGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGAAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACACGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC Silene_zawadzkii_2447_AJ629306 CCTGATCTTATTATAAACCCACATGCATTTCCTTCTAGGATGACCATTGCTATGCTTTTGGAATCCATTGCTTCCAAGGTAAATACG-CTCTTTCTATTTGGCCTTTTATATCTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTCTTTATTTTCTACTAAGGTAGCCAAAATAACATTTTTTTT-----------ATTTGGCCTTTT-CTATCCTCTCGCTGATTATTGACCGCTA--------TAATGTTTCCGGATATCTGCTTACA-CATTT-CCGACAAATACACACTGAAGCATAGAAATA--------GTTACTCTTGGAACTGTAAAA-------TGTT-GTAGAATGGAA-----------------TTCGGCTTCTTAATCT-GCTTGAAGAGAAAACACGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTTTT-------GAACAAACTTCCTGGTTTCTATTCTGGAGGTGTCCACGAATCCTCTTTTT-----------------CCTTAAGTTATTCATGGTCATTGTGGTCTGTGA--------------TCCTAGATCATTCATC-AACTTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCT------ACATCTC-------------------------------------AGTTTCGTG-------AACAT--AGGATAA-----CTCAATTT----AAGCTCCCTTAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATGGCTGT--------GGCTCATCCAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAGCATTAGGTTTATT----ATCTCTTAC-TTCTTGCTGTAGGGCGGTAGTTTGCATGGAAAATTTGTTGATGCAACACCATTTGAGGACGCCTTGAAGAAGGATGGAGAGGGTGGATCTGAGTCGCCTTCGCTTGTTGATGAACTTGGCTCCATGTTAGCAGCACGCGGGTTCAATAGATATGGTACTGAAGTATTGTATAGTGGAGTTTATGGCACCGAGTTAACATGC ; END; BEGIN CHARACTERS; TITLE RPA2_indels; DIMENSIONS NCHAR=110; FORMAT DATATYPE = STANDARD GAP = - MISSING = ? SYMBOLS = " 0 1"; MATRIX Atocion_rupestre_13547_FJ383913 0000001000000000000000001?101001011110010110100010001?0000000000000000000?1??00?111100001110110?1?10?11?000100 Eudianthe_laeta_1341_AJ629284 000000??100000000000?10???1000011110100101101000?1?0??000000000000000000000?100?111100000100110?1?10?11?000011 Lychnis_chalcedonica_2487_AJ629286 100000??100000000000??1???000001001010010101?????0000100000000?100??0???0?0?001?1111001??110110?1?10?11?000100 Lychnis_coronaria_7484_AJ629287 0?100000000000000000??1???100001001010010111?????0001?000000000000000???1?0?001?1111001??010110?1?10?11?000100 Lychnis_floscuculi_2406_AJ629288 1?1000??100000000000??1???100001000010010011?????0001?000000000000??1?????0?001?1101001??010110?1?10?100000000 Petrocoptis_pyrenaica_2486_AJ629289 000000??100000000100??0???000001011010010110001010001?00000000???1???????????00?111100000110110?1?10?11?01??00 Petrocoptis_pyrenaica_2875_FJ376880 000000??100000000100??0???000001011010010110001010001?00000000???1???????????00?111100000110110?1?10?11?01??00 Silene_akinfievii_6897_04301 010000??100000000000?10???100001011010010110000110001?000000000000100??0000?000?1111001??1?11?1?0110?11?000100 Silene_ammophila_12639_03155 010000??100000000100??0???100001011010010110000110001?00000000??10????????0?000?1111001??110110?1?10?1??000100 Silene_aprica_7570_00632 010000??100000000000?10???100001011010010110000110001?000000000000??1?????0?000?1111001??110110?1?10?11?000100 Silene_aprica_7570_00633 010000??100000000000?10???10000101101?1?0?10000110001?000000000000??1?????0?000?1111001??110110?1?10?11?000100 Silene_conica_E_02976 010000??100000000??1??0???100001011010010110000110001?00000000??10????????0?000?1111001??110110?1?10?11?000100 Silene_conica_O_AJ629293 010000??100000000??1??0???100001011010010110000110001?00000000??10????????0?000?1111001??110110?1?10?11?000100 Silene_coniflora_S_04303 010000??100000000000?10???100001011010010110000110001?00000000??10????????0?000?1111001??110110?1?10?11?000100 Silene_coniflora_Z_04292 010000??10000000000000001?100001011010010110000110001?00000000??10????????0?000?1111001??110110?1?10?11?000100 Silene_conoidea_12655_02098 010000??100001??????????????????????10010110000110001?00000000??10????????0?000?1111001??110110?1?10?11?000100 Silene_davidii_13374_02634 010000??1000000000000001??100001011010010110000110001?000000001000?00??0000?000?1111001??110110?1?10?11?000100 Silene_davidii_13374_02635 ?10000??1000000000000001??100001011010010110000110001?000000000000100??0000?000?1111001??110110?1?10?11?000100 Silene_diclinis_DIC_7_g04582 010100?1000000000000?10???1000110110100101100001100?000??????????????????????00?1111001??11010010110?11?000100 Silene_diclinis_DIC_7_t02852 010100?1000000000000?10???1000110110100101100001100?000??????????????????????00?1111001??11010010110?11?000100 Silene_dioica_D184_24_L02850 ?10100?1000000000000?10???100011011010010110000110001?000000000000?10???0?0?000?1111001??11010010110001?000100 Silene_dioica_D184_24_S03161 ?10100?1000000000000?10???100011011010010110000110001?0000000000000000000001000?1111001??11010010110?11?000100 Silene_elisabethae_2470_02942 010000??100000000000?10???100001011010010110000110001?000000000000000???1?0?000?1111001??1?11?1?0110?11?000100 Silene_fedtschenkoana_12132_04294 010000??100010000000?10???100001011010010110000110001?00000000?100??0???0?0?000?1111001??110110?1?10?11?000100 Silene_fruticosa_1064_AJ629294 100000??100000000100??0???100001011010010110000010001?100??100??00??0???0?0?000?111100010110110?1?10?101000100 Silene_heuffelii_H4_6_02857 010100?1000000000000?10???1000110110100101100001100?1?0?????????????????????000?1111001??11010010110?11?000100 Silene_integripetala_1920_02364 010001???000000000001000001000010110110?0010000110001?000000000000000??10?0?000?1111001??110110?1?10?11?000100 Silene_latifolia_L121_9_03113 010100?1000000000000?10???1000110110100101100001100?1?0??0???????????0???????00?1111001??11010010110?11?000100 Silene_latifolia_L170_10_02855 010100?1000000000000?10???1000110110100101100001100?1?0?????????????????????000?1111001??11010010010?11?000100 Silene_latifolia_L200_2_03119 010100?1000000000000?10???1000110110100101100001100?1?0??0???????????0???????00?1111001??11010010110?11?000100 Silene_latifolia_L81_9_A03112 010100?1000000000000?10???100011011010010110000110001?000000000000000?10000?000?1111001??11010010110?11?000100 Silene_latifolia_L81_9_B03337 010100?1000000000000?10???100011011010010110000110001?01?????????????????????00?1111001??11010010110?11?000100 Silene_littorea_13501_ 010000??10100001???????????0?001011010010110000100001?001????0???0????????0?01000011001??1?11?1?0110?11?00010? Silene_lydia_L_04359 010010???1???0?????????????0?001011010010110000110001?00000000??10????????0?000?1111001??110110?1?10?11?000100 Silene_lydia_S_04326 010010???1???0?????????????0?001011010010110000110001?00000000??10????????0?000?1111001??110110?1?10?11?000100 Silene_macrodonta_13984_03101 010000??100000000100??0???100001011010010110000110001?00000000??10????????0?000?1111001??110110?1?10?11?000100 Silene_marizii_M4_1_A02860 010100?1000000000000?10???100011011010010110000110001?000000000000000???1?0?000?1111001??11010010110?11?000100 Silene_marizii_M4_1_B03096 010100?1000000000000?10???100011011010010110000110001?0000000000000001000000000?1111001??11010010110?11?000100 Silene_multinervia_P_02103 010000??100000000000?10???100001011010010110000110001?000100000000000?000000000?1110001??110110?0110?11?001?00 Silene_multinervia_R_04361 010000??100000000000?10???100001011010010110000110001?000100000000000?000000000?1110001??110110?0110?11?001?00 Silene_multinervia_S_02943 010000??100000000000?10???100001011010010110000110001?000100000000000?000000000?1110001??110110?0110?11?001?00 Silene_nigrescens_KGB217_AJ629298 010000??10000000000000001?100001011010010110000110001?000000000000000000010?000?1111101??110110?1?00?11?000100 Silene_noctiflora_O_02975 010000??100000000000?10???100001011010010110?1?110001?000???10???0????????0?000?1111001??110110?0110?11?100100 Silene_noctiflora_P_04109 010000??100000000000?10???100001011010010110?1?110001?000???10???0????????0?000?1111001??110110?0110?11?100100 Silene_pendula_12654_A03097 010000??100000000?10??0???10000101100001011000011001?????????????????????????????111001??110110?1?10?11?000100 Silene_pendula_12654_B02097 010000??100000000000?10???10000101100001011000011001?????????????????????????????11101???110110?1?11??1?000100 Silene_pseudoatocion_7821_ 000000??100000100100??0???100001011010010110000010001?000????1???????????????00101110000011010001?10?11?000100 Silene_pygmaea_13772_03486 000000??100000001?00??0???11?????110100?1??0???010001?000??100??00??0???0?0?000?111100000110110?1?10?11?000100 Silene_quadriloba_12438_02102 010000??1?000?0?????0?????100000011010010110000110001?000?1000?000?00??0000?000?1111001??110110?1?10?11?00010? Silene_samia_7822_02514 010000??10?100000000?10???100001011010000110000110101?000000001000?00??0000?000?1111001??110110?1?10?11?000100 Silene_schafta_7615_ 000000??100000001?00??0???11?????110100?1??0???010001?000??100??00??0???0?0?000?111100000110110?1?10?11?000100 Silene_stellata_6374_01440 010000??100000000000000001100001011010010110000110001?000000001000?00??0000?000?1111001??110110?1?10?11?01??00 Silene_subconica_1033_03489 010000??100000000100??0???1001???11010010110000110001?000000000000??1?????0?000?1111001??110110?1?10101?000100 Silene_turkestanica_12484_03156 010000??1?000?0?0000?10???1?0001011010010110?1?110001?00000000??10????????0?000?1111001??110110?0110?11?100100 Silene_uniflora_2403_00589 010000??1000000000000001??100001011010010110000110001?000000001000?00??0000?000?1111001??110110?1?10?11?000100 Silene_viscosa_7705_02994 010000??10000000000000001?100000011010010110000110001?000?1000?000?00??0000?000?1111001??110110?1?10?11?000100 Silene_vulgaris_6459_00868 010000??100000000000?10???100001011010010110000110001?000000001000?00??0000?000?1111001??110110?1?10?11?000100 Silene_zawadzkii_2447_AJ629306 010000??100000000000?10???100001011010010110000110001?00000000??10????????0?000?1111001??110110?1?10?11?000100 ; END; BEGIN TREES; Title RPA2_TB; LINK Taxa = TaxaForAnalysisStep6810; TRANSLATE 1 Atocion_rupestre_13547_FJ383913, 2 Eudianthe_laeta_1341_AJ629284, 3 Lychnis_chalcedonica_2487_AJ629286, 4 Lychnis_coronaria_7484_AJ629287, 5 Lychnis_floscuculi_2406_AJ629288, 6 Petrocoptis_pyrenaica_2486_AJ629289, 7 Petrocoptis_pyrenaica_2875_FJ376880, 8 Silene_akinfievii_6897_04301, 9 Silene_ammophila_12639_03155, 10 Silene_aprica_7570_00632, 11 Silene_aprica_7570_00633, 12 Silene_conica_E_02976, 13 Silene_conica_O_AJ629293, 14 Silene_coniflora_S_04303, 15 Silene_coniflora_Z_04292, 16 Silene_conoidea_12655_02098, 17 Silene_davidii_13374_02634, 18 Silene_davidii_13374_02635, 19 Silene_diclinis_DIC_7_g04582, 20 Silene_diclinis_DIC_7_t02852, 21 Silene_dioica_D184_24_L02850, 22 Silene_dioica_D184_24_S03161, 23 Silene_elisabethae_2470_02942, 24 Silene_fedtschenkoana_12132_04294, 25 Silene_fruticosa_1064_AJ629294, 26 Silene_heuffelii_H4_6_02857, 27 Silene_integripetala_1920_02364, 28 Silene_latifolia_L121_9_03113, 29 Silene_latifolia_L170_10_02855, 30 Silene_latifolia_L200_2_03119, 31 Silene_latifolia_L81_9_A03112, 32 Silene_latifolia_L81_9_B03337, 33 Silene_littorea_13501_, 34 Silene_lydia_L_04359, 35 Silene_lydia_S_04326, 36 Silene_macrodonta_13984_03101, 37 Silene_marizii_M4_1_A02860, 38 Silene_marizii_M4_1_B03096, 39 Silene_multinervia_P_02103, 40 Silene_multinervia_R_04361, 41 Silene_multinervia_S_02943, 42 Silene_nigrescens_KGB217_AJ629298, 43 Silene_noctiflora_O_02975, 44 Silene_noctiflora_P_04109, 45 Silene_pendula_12654_A03097, 46 Silene_pendula_12654_B02097, 47 Silene_pseudoatocion_7821_, 48 Silene_pygmaea_13772_03486, 49 Silene_quadriloba_12438_02102, 50 Silene_samia_7822_02514, 51 Silene_schafta_7615_, 52 Silene_stellata_6374_01440, 53 Silene_subconica_1033_03489, 54 Silene_turkestanica_12484_03156, 55 Silene_uniflora_2403_00589, 56 Silene_viscosa_7705_02994, 57 Silene_vulgaris_6459_00868, 58 Silene_zawadzkii_2447_AJ629306; TREE RPA2_mb_con_50_majrule = (1:0.071457,(((3:0.028585,(4:0.010595,5:0.028574)1.00:0.008897)1.00:0.026531,((((8:0.005032,23:0.002418)1.00:0.004957,33:0.048857)1.00:0.00862,((20:0.002717,19:0.001342)1.00:0.004183,21:0.003915,22:0.002601,26:0.002452,31:0.002507,32:0.001319,(28:0.001369,30:0.001368)0.83:0.003652,29:0.006862,(37:0.002494,38:0.001323)0.97:0.002456)1.00:0.022207,((43:0.001313,44:0.001204)1.00:0.003824,54:0.007299)1.00:0.024701,(39:0.001201,41:0.001191,40:0.002412)1.00:0.011978)0.83:0.00267,((((11:0.016499,10:0.003677)1.00:0.003572,((18:0.005523,17:0.001373)0.96:0.002693,42:0.00541,52:0.006151)0.95:0.002375,24:0.003687,(49:0.00285,56:0.004213)1.00:0.011403)1.00:0.003553,(55:0.007188,57:0.001231)1.00:0.020929,58:0.005765)0.98:0.002404,(27:0.047115,((((9:0.010214,(13:0.001227,12:0.00124)1.00:0.010247,53:0.011512)0.84:0.00465,36:0.013069)1.00:0.007133,((15:0.00608,14:0.00127)1.00:0.008405,16:0.011771)0.92:0.003463)1.00:0.00759,(35:0.001427,34:0.002632)1.00:0.018507)1.00:0.008148)0.94:0.003702,((45:0.006226,46:0.011171)1.00:0.015488,50:0.026352)1.00:0.005859)0.92:0.002754)1.00:0.018563)1.00:0.009969,(25:0.021027,47:0.05168,(48:0.009349,51:0.003208)1.00:0.015651)1.00:0.026566)1.00:0.009139,(2:0.055682,(7:0.002344,6:0.002309)1.00:0.048675)0.99:0.007692); TREE RPA2_PAUP_1 = (1,(2,(7,6)100)88,(((3,(4,5)95)100,((((8,23)94,33)95,((20,19)89,21,22,26,31,32,(28,30)78,29,(37,38)61)100,((43,44)91,54)100,(39,41,40)100)60,(((11,10)83,((18,17)62,42,52)61,24,(49,56)100)79,(55,57)100,58)55,(27,((((9,(13,12)100,53)52,36)97,((15,14)100,16)68)90,(35,34)100)97)55,((45,46)100,50)86)100)99,((25,47)70,(48,51)100)100)97)0; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED (CHARACTERS = RPA2_dna) = unord: 1 - 2533; TYPESET * UNTITLED (CHARACTERS = RPA2_indels) = unord: 1 - 110; END; BEGIN CODONS; CODESET * UNTITLED (CHARACTERS = RPA2_dna) = universal: 1 - 2533; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED (CHARACTERS = RPA2_dna) = 'Jukes-Cantor': 1 - 2533; ProbModelSet * UNTITLED (CHARACTERS = RPA2_indels) = 'Mk1 (est.)': 1 - 110; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1295559382705; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 6836119197476964813; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 4488809509534557588; mqVersion 273; checksumv 0 2 3765708519 null getNumChars 2533 numChars 2533 getNumTaxa 58 numTaxa 58 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 1195173.0 sumSquares -4.611686018427378E19 NumFiles 1 NumMatrices 2 errorReportedDuringRun; mqVersion; setID 1 8444312615382598346; mqVersion 273; checksumv 1 2 1656043736 null getNumChars 110 numChars 110 getNumTaxa 58 numTaxa 58 short true bits 3 states 3 sumSquaresStatesOnly 9873.0 sumSquares 9873.0 NumFiles 1 NumMatrices 2 errorReportedDuringRun; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 329; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 464; setLocation 264 26; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; endTell; end;