#NEXUS [written Thu Jan 20 16:34:12 EST 2011 by Mesquite version 2.73 (build 544) at dhcp128036177160.central.yale.edu/128.36.177.160] BEGIN TAXA; TITLE taxa; DIMENSIONS NTAX=40; TAXLABELS Eudianthe_laeta_1341_EU221635 Lychnis_chalcedonica_7242_EU308502 Lychnis_floscuculi_2406_EU221628 Lychnis_flosjovis_7566_02996 Petrocoptis_pyrenaica_2486_EU221638 Silene_akinfievii_6897_03536 Silene_ammophila_12639_03523 Silene_aprica_6271_04293 Silene_conica_E_EU221624 Silene_conoidea_12655_03518 Silene_diclinis_DIC_7_04428 Silene_dioica_D184_24_4426 Silene_elisabethae_2470_3515 Silene_fedtschenkoana_12132_03517 Silene_fruticosa_1064_EU308501 Silene_heuffelii_H4_6_4339 Silene_integripetala_1920_EU Silene_latifolia_L121_9_3130 Silene_latifolia_L170_10_4415 Silene_latifolia_L200_2_4419 Silene_latifolia_L81_9_3131 Silene_littorea_13501_EU221619 Silene_lydia_L_04373 Silene_macrodonta_13984_03522 Silene_marizii_M4_1_04341 Silene_multinervia_P_03669 Silene_multinervia_R_04375 Silene_multinervia_S_03519 Silene_noctiflora_O_03521 Silene_noctiflora_P_04431 Silene_pseudoatocion_7821_EU221630 Silene_pygmaea_13772_FN821368 Silene_quadriloba_12438_03535 Silene_samia_7822_EU221618 Silene_schafta_7615_02527 Silene_turkestanica_12484_03526 Silene_uniflora_7827_EU221620 Silene_viscosa_7705_03529 Silene_vulgaris_6459_03662 Silene_zawadzkii_2447_EU221621 ; END; BEGIN CHARACTERS; TITLE trnLF_indels; DIMENSIONS NCHAR=195; FORMAT DATATYPE = STANDARD GAP = - MISSING = ? SYMBOLS = " 0 1"; MATRIX Eudianthe_laeta_1341_EU221635 000000100000001?00000?100??0000110110???10010001??????010001?1????0?????00????0??0?0?0?00000001000001?0000100110001000110?1?1000000000000000010?00010000001???1?0?110010?1??????????1??010001?11111 Lychnis_chalcedonica_7242_EU308502 000100?10000001?00??1??????????110100110000100001?????01000010?0000000000000000000000010000000100001000?1??1?01010100010001?100000000000000000010000000001????0101000010?1??????????01?00011??11111 Lychnis_floscuculi_2406_EU221628 000100?10000001?01?????????????1101000?10001000000001?01000010?0000000000000000000001000000000100001000?1??1?01010100010001100000000000010?00?0?00000000001???01010000100001????????01?00101??11111 Lychnis_flosjovis_7566_02996 000000?10000001?00??1??????????110101?????????????????????????????????????????????????????????????????????????????100000001?10000000000000000?1?0?000000001???0100000010?1??????????01?00001??1???? Petrocoptis_pyrenaica_2486_EU221638 010000?100000?00???????????????????????????????????????????????01000??0?0000000??0?000000000010?1?0???0?1??011111010001?1?1?100000010000?0?00?0?00000000001???000100001000101???????00100001??11111 Silene_akinfievii_6897_03536 000?10???100001?00000?100??00?1110110????1?100001?????01010?001000000000000000000010000001000000010???0?1??1?110101000110?10000010???100?0??0??????001?010????01010001?000000001????01?00001??11111 Silene_ammophila_12639_03523 0?1?00?????1001?00000???1??????110110????1?100000001??01010?10?0?100??0?00???00??0?000000?1?????1?0???0?1??1?100101000110?1000?1?0?00000?1?????????01??0001???010100001000000000?1?001?10001??10111 Silene_aprica_6271_04293 000?10??????101?00000?100??10?1110110???100100000?1???01010?10?0000000000001000??0?0000001000000010???0?1??1?110101000110?10000010??1000?0?00???0??00000001???01010000100000000010?101?00001??11110 Silene_conica_E_EU221624 0?1?00?????1001?00000???1??????110110????1?100000?1???01010?10?0?100??0?00???00??0?000000?1????0010???0?1??1?100101000110?1000?1?0?00000?1?????????00000001???010100001000000000?1?001?10001??10111 Silene_conoidea_12655_03518 010000?????1001?00000???1??????110110????1?10001??????01010?10?0?100??0?00???00??0?000000?1?????1?0???0001?1?110101000110?1000?1?0?00000?1?????????00000001???010100001000000001????01?00001??11111 Silene_diclinis_DIC_7_04428 000100??????101?0000010000000?1110110????1?100001?????01010?10?0000000000000000??1????????????????0???000001?11010???0110?100000001??100?0??0??????000000000010101000010000001??????01?00001??11111 Silene_dioica_D184_24_4426 ???????????????????????????????110110????1?10001??????01010?10?000000000000000000000?1????????????0???000001?11010???0110?100000001??100?0??0??????000000000010101000010000001??????01?00001??11111 Silene_elisabethae_2470_3515 000?10??????101?0000000001?00?1110110????1?10001??????01010?10?000000000000?100??0?0000001000000010???0?1??1?110101000110?1000?1?0?0000000??1??????00000000?1?010100001000000001????01?00001??11111 Silene_fedtschenkoana_12132_03517 000?10??????101?0000000001?01??110110????1?100000001??01010?10?000000000000??10??0?0?00000000000010???0?1??1?110101000110?10000010??1000?0?00???0??00000001???01010000?1?0?00000000001?00001??11100 Silene_fruticosa_1064_EU308501 000?10?1000000010000000001?0010110110????1?1010000001?1???0?10?1000010000000000000?1?0????0???0?1?0???0?1??1?110101000110?1?1000000000000000000000000000001???010100001010001???????01?00001??01111 Silene_heuffelii_H4_6_4339 000100??????101?0000010000000?1110010????1?1001???????01010?10?00000000??1????????????????????????0???0?1??1?110101000110?100000001??100?0??0??????000000000010101000010000001??????01?00001??11111 Silene_integripetala_1920_EU 000100???10001??00000?100??00?1110110????1?1001???????010?1???????0?????00????0??0?0?0?000000001000?000?1??1?1101010001001100000?1???000?0?00???0??00000001???01010000100000001?????01?00001??11111 Silene_latifolia_L121_9_3130 ????????????????0000010000000?1110110????1?10001??????01010?10?0000000000000000??1????????????????0???000001?11010???0110?100000001??100?0??0??????00000001???0101000010000001??????01?00001??11111 Silene_latifolia_L170_10_4415 000100??????101?0000010000000?1110110????1?1001???????01010?10?000000000000000000000?1????????????0???000001?11010???0110?100000001??100?0??0??????000000000010101000010000001??????01?00001??11111 Silene_latifolia_L200_2_4419 ???????????????????????????00?1100110????1?1001???????01010?10?000000000000000000000?1????????????0???0?1??1?11010???0110?100000001??100?0??0??????000000000010101000010000001??????01?00001??11111 Silene_latifolia_L81_9_3131 ????????????101?0000010000000?1110010????1?1001???????01010?10?00000000??1????????????????????????0???0?1??1?11010???0110?100000001??100?0??0??????000000000010101000010000001??????01?00001??11111 Silene_littorea_13501_EU221619 000?10?10000001?00000??10??00?1111110????1?1001???????01010?10?000000000000???1??0?0?0????000000010???010001?110101000110?10000010?000000000000?1??00010001???0?1100101000000000001101?00001??11111 Silene_lydia_L_04373 1???00?????1001?00000???1??????110110????1?100001?????01010?10?0??1??????0????0??0?0?0????00000?1?0???0?1??1?110101000110?1000?1?0???100?0??0??????00000001???010100001000000001????01?00001??11111 Silene_macrodonta_13984_03522 0?1?00?????1001?00000???1??????110110????1?100001?????01010?10?0?100??0?00???00??0?000000?1?????1?0???0?1??1?100101000110?1000?1?0?00000?1?????????00000001???010100001000000001????01?10001??10111 Silene_marizii_M4_1_04341 ?????????????01?0000010000000?1110110????1?10001??????01010?10?000000000000000000000?1????????????0???000001?110101000110?10000010?0000000?10??????000000000010101000010000001??????01?00001??11111 Silene_multinervia_P_03669 000100?10000001?00100?0000000?1110110????1?100000?1???01010?10?000000000000000000010000001000000010???0?1??1?110101000110?1000?1?0?0000000?10??????00000001???010100001000000001????01?00001??11111 Silene_multinervia_R_04375 000100?10000001?00100?0000000?1110110????1?100000?1???01010?10?0000000000000000000000001??000000010???0?1??1?110101000110?1000?1?0?0000000?10??????00000001???010100001000000001????01?00001??11111 Silene_multinervia_S_03519 000100100000001?00100?0000000?1110110????1?100000?1???01010?10?0000000000000000000000001??000000010???0?1??1?110101000110?1000?1?0?0000000?10??????00000001???010100001000000001????01?00001??11111 Silene_noctiflora_O_03521 000000???100001?00000?100??00?1110110????1?11????????????????????????????????????????????????????????????????110101000110?1000100000000000?10??????00000001???010100001000000001????01?00001??11111 Silene_noctiflora_P_04431 ?00000???100001?00000?100??00?1110110????1?11????????????????????????????????????????????????????????????????11010???0110?1000100000000000?10??????00000001???010100001000000001????01?00001??11111 Silene_pseudoatocion_7821_EU221630 000??1000000001?0000000001?0000010110?000011000001000000010?10?00000001?00???00??0?0000000001?00010???0?1??1?110110000010?1??1?0000000000000010?01100000001???0101000010?1??????????000000000001011 Silene_pygmaea_13772_FN821368 000100?10000001?0000000001?0000110110????1?000000000010?1?0?10?00000010?0000000??0?0000000001?000000010?1??1?110101000110?1?100000000000000000010100000000010?0101000010?1??????????01?00001??11111 Silene_quadriloba_12438_03535 000?10??????101?0000000000101??110110????1?100001?????01010?0000000000010000000??0?0000001000000010???0?1??1?110101000110?10000010??1000?0?00???0??00000001???010100001000000001????01?00001??11110 Silene_samia_7822_EU221618 000100????10001?0000000001?01??110110????1?100001?????01010?10?00000000000000001000000001?000000010???1????1?110101010110?000000001????1???????????000?1?0????010100000000000001????01?000000111111 Silene_schafta_7615_02527 000100?10000001?0000000001?0000110110????1?100000000000?1?0?10?00001????00????0??0?0?0000001??000000000?1??1?110101000110?1?10000000000000100?0?0100000000010?0101000010?1??????????01?00001??11111 Silene_turkestanica_12484_03526 000100??1000001?10??0???0??00?1110110????1?11????????????????????????????????????????????????????????????????110101000110?1000100000000000?10??????00000001???010100001000000001????01?00001??11111 Silene_uniflora_7827_EU221620 000100??????101?00?10??00??00?1110110????1?10001??????01010?10?000000000001??00??0?00000010000000001000?1??1?110101001?10?1000?1?0????10???????????00000001???010100001000000001????01?00001??11111 Silene_viscosa_7705_03529 000?10??????101?0000000000101??110110????1?100001?????01010?0000000000010000000??0?0000001000000010???0?1??1?110101000110?10000010??1000?0?00???0??00000001???010100001000000001????01?00001??11110 Silene_vulgaris_6459_03662 000100??????101?00?10??00??00?1110110????1?100000001??01010?10?00000000?10????0??0?0?0????000000010???0?1??1?110101001?10?1000?1?0????10???????????00000001???010100001000000001????01?00001??11111 Silene_zawadzkii_2447_EU221621 000100???100001?0000000001?01??110110????1?100000?1???01010?10?0000000000000000?10?00000000000000?1???0????1?110101101?10?1000?1?0?0000000?10??????00000001???010100001000000001????01?00001??11111 ; END; BEGIN CHARACTERS; TITLE trnLF_dna; DIMENSIONS NCHAR=1421; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Eudianthe_laeta_1341_EU221635 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATGAAAAAAAAGGGGCAATCCTGAGCCAACTCC--------TTTATATTTTCCTTTTTT----CAAAAACAAAAAAA----TAATTAAGAAAGCAAGAATAAAAAAGGATAGGTGCAGAGACTCAAAGGGAGTTGTTCTAACAAA------TTAGATTTAATGTGTTGTTAT---AAGTATAAGACTTCTTCTGTCTAAA----TTCCAAACCAA---------GAA----------------------------------------TAAAGGG---TGAAGAATATACATACTGAAATGATTAATGACAACCCGAATCTGTTCTGTATTTTTTTTA--------------CATATTTAA-AAAAATTTTTATTTATT----TATAGAAAT-----------------------------------------------------------------AGAAA-TCTATATATA---------------------TTATAGTAGAAATTTAGA--TTAGAATAGGAAATAAAAAAAATACAA------GAATTGTTGTGAATTGATTCCAAGTTAAAAGCGGAATCCATAT------TTATTCATCAAAACATTCACACCCATTCTATAGCTCTATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGATTTTTTAAATCCTTAACTAATTATCTTTTTTT-GCATT------AACGCTTTAAAGTTAAA------GCGGTTTATGTTCTT-----------------CCTTTTTTTTT----CAAAAGAAGATTCTGTTTTATCTTA-----AGTTTTAGGATATATTT-------------------------------GATAGGCGGA---------TAAATAGCTTTTTTTT------AGCAAGTAATACTC--------AATTCATAATCTATATTTTGACA---TTATT--------------------------------AGATAAAT-------------------TTATAAAATTATATACAGAGTTACTCTTTTTGAAAACCCCCAAAAT-CCGGTACCTATATAAA-----------------TAATTGTAAGA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATACACCAGAAAAGGGAATGGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC Lychnis_chalcedonica_7242_EU308502 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT-AAAAAAAAGGGCAATCCTGAGCCAACTCC---------TTTTCTTTTTCTTTTTT----CAAAAGAAAAAAA------------------------------GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCTGTCTAAA----TTCCAAACCAAAAAAA----GAA------ATAATTAAATAATATAAATAATTTAATAATATAATAAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCGAATCTGTTCTGTATTTTTTTTTT-------------CTAATTTTT-AGATATTTATTAATAATTTTTTAATTAAAT--------------AATATAGTATTTTATATATATTATTATT-----------------ATATATATAAA-TCTATATTT------------------AAATTTCTAGTAGAGAT-------TTATAATAGTAAATGAAAAA--TGCAATAACAATAATTGTTGTGAATCTATTCCAAGTTAAAAGCAGAATCCCTAT------TTATTCATCAAAACATTCACACTCA--------CTCCCTAGTCTGATAGATCTTGTGAAGAGCTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAATCCTTTTTCACTCCTTAAAAAATTATCTTTTTTT-GCATTACCATTACCGTTTTAAAGTTAAA------GATGGTTATGTTCCT-----------------CCTTTTTTTTTT---CAAAATAGGATTTCTTTTTATCTTATCAAAAGTCTTATAATATATA------------------------------------GGCGGACAAA-----TAACTATCTTTTATTT-----GAGTAGGTAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTCTT--------------------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCCAAAATTT------CTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATTTTGTAAAA-----TGGGGAGATGATGCACCAGAAAAGAGAATGGTCGGGATAGCTCAGCTGGTAGAGCAGAGGACTGAAA??? Lychnis_floscuculi_2406_EU221628 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT-AAAAAAAAGGGCAATCCTGAGCCAACTCC---------TTTTATTTTTTTTTTTT----CAAAAGAAAAAA-------------------------------GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCTGTCTAAA----TTCCAAACCAAAAAAATAAAGAA-----------------------------------TATAATAAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCGAATCTGTTCTGTATTGTATTTTTTTT----------CTAATTTTT-AGATATTTCTTAATAATTTATTACTAAAAG--------------AATATAGTATTTTATATATATATA-------------TTTCTATTATATATAGAAA-TCTATATTT------------------AAATTTCTAGTAGAGAT-------TTATAATAGTAAATGAAAAA--TGCAATAACAATAATTCTTGTGAATCTATTCCAAGTTAAAAGCGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCCCAGTCTGATAGATCTTGTGAAGAGCTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAATCCTTTTTCACTCCTTAACAAATTTTCTTTTTTT-GCATTACCATTACCGTTTTAAAGTTAAA------GATGGTTATGTTCCT-----------CCCCCCCCTTTTTTT------CAAAATAGGATTTATTTTTATCTTATCAAAAGTCTTATAATATATAT-------------------------------GATAGGTGGACAAA-----GAAATATCTTTTATTT-----GAGCAGGTAGTACTCCGTTGAGTAATTCATAATCTATTTTTTGACA---TTATTATATA---------------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCTTCTTGTTGAAGACCCCCCAATTT--GGTACCTATA---------------------TAATTGTAAGA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTTGTAAAA-----TGGGGAGATGATGCACCATAAAAGAGAATGGTCGGGATAGCTCAGCTGGTAGAGCAGAGGACTGAAAA?? Lychnis_flosjovis_7566_02996 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATTAAAAAAAAAGGGCAATCCTGAGCCAACTCC---------TTTTATTTTTCTTTTTT----CAAAAGAAAAAAA------------------------------GGATAGGTGCAGAGGCTCAAAGGGAGTTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCTGTCTAAA----TTCCAAACCAAACAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGGTTCAAGTCCCTTTATCCCCA-------AAATTCTTTTTCACTCCTTAACAAATTTTCTTTTTTTTGCATTACCATTACCGTTTTAAAGTTAAA------GATGGTTGTGTTCCT-----------------CCTTTTTTTTT--------ATAGGATTTATTTTTATCTTATCAAAAGTCTTATAATATATAT-------------------------------CATAGGCGGACAAA-----TAAATATCTTTTATTTTATTTGAGCAGGTAGTACTCCGTTGAGGAATTCATAATCCATATTTTTACA---TTATT--------------------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCAAAAAATTTCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCC?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Petrocoptis_pyrenaica_2486_EU221638 ACCTATTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAAT-AAAAAAAAAGGGCAATCCTGAGCCAACTCC---------TTTTATTTTCCTTTTTTTTTT??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????TATATA-----------------------TTATATATAAAATAAATCTATA-----TTCTATA-------------------------TTATAGTAGAAAT-------TTAGAATAGGAAATGAAAAAA-TGCAA------GAATTGTTGTGAATAGATTCCAAGTTAAAAGAGGAATCCATAT------TTATTCAT-----CATTCATACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTTATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCRAGTCCCTCTATCCCCA-------AAAGCTTTTTTGACTCCTTAACTAATTATATTTTTTT-GCATT---------------AATTTAAA------GATGGTTATGTTCCT-----------------CCTTTTTT-------CAAAAGAGGATTCATTTTTCTCTTATCACAAGTCTTGTGATATATAT-------------------------------GATAGACGGACAAATAAAATAAATATCTTTGATTT-----GATCTGGTAGTACTCTGTTGAGTAATTCATAATCCATATTTTTACA---TTATTT--TATT-------------------------ATATAAAACTTATATA-----------ATATAAAATTATATACCGAGTTCCTCTTTTTTAAGACCCCAAAATTTTCGGTATCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TAGGGAGATGCTGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGCTGGTAGAGCAGAGGACTGAAAATC Silene_akinfievii_6897_03536 ?CCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT--AAAAAAAGGGCAATCCTGAGCCAACTCC-----------TTTTTTTCCTTTTTT----CAAAAGCAAAAAAA----GTATTAAGAAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTTTT-------------ATAATTTTG-AGATAT-----------------ATAAAATAATACT--------AATATAGTATTTTATATATATA-----TATTATATA------------------TTTTATATAT------------------------TTATAGTAGAGAT-------TTATAATAGGAAATTAAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTTAACAAATTATCTTTTTTT-GCATT------ACCGTTTTAAAGTTAAA------GATGGTTATGTTCCTATATATATA----------TTTTTT-------------------------GATCTTATCACAAGTCTT----TATAT---------------------------------GATAGGAAGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATA-----------TTTTTATATATTATTATTA------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCCAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCA?????????????????????????? Silene_ammophila_12639_03523 ??????????????????????AATTCAGAGAAACCCTGGAAT--AAAAAAAAGGGCAATCCTGAGCCAACTCC-------------TTTTTCCTTTTTT----CAAAAGCAAAAAAA-----------------------------GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTTTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTTTTTT-----------CTAATTTTG-AGATAT-----------------ATAAAAT--------------AATATA--------------------------TATA----------------------CTATT-------------------------TTATAGTAGAGAT-------TTATAATAGGAAATTAAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATATCCATATTTATTCATTAAAACATTCACACTCA--------CTCCATAGT?TGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTTAACAAATTCTATTTTTTT-GCATT------ACCATTTTAACGTTAAA------GATGGTTAGGTTCCTATATATAT-----------TTTTTTT-------------------------ATCTTATCACAAGT-------TATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTTGTATATATTATTATTTA--------TATAAAATAATATAAAACTT----------------ATGTAAAATTTT--------TTTCTCTTTTTGAAGACCCCCAAAATGCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTTATAATTGATTAACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGCTG?????????????????????? Silene_aprica_6271_04293 ?CCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT--AAAAAAAGGGCAATCCTGAGCCAACTCC--------------------TTTTTT----CAAAAGCAAAAAAA----GTATTAAGAAAG--AAAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCCCTAAA----TTCCAAACCAA---------GAA----------------------------------------TAAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTTTTT------------CTAATTTTG-AGATAT-----------------ATAAAAT--------------AATATAGTATTTTTTATAT-----------TATATA------------------TTTTCTATAT------------------------TTATCGTAGAGAT-------TTATAATAGGAAATTGAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAACCATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAACTTTTTTCACTCCTTAACAAATTATCTTTTTTT-GCATT------ACCGTTTTAAAGTTAAA------GATGGTTATGTTCCGATATATATA----------TTTTTT-----------------------GTGATCTTATCACAAGTCTTATAATATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTTTTATATATTATTATTAA--TATTA----------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCCAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGATTA------ATTGACACAAA-CCCAAGTTATCTAGTAAAATAAAATGGGGAGAGGATGCACCAGAAAAAGGAATGGTCGGGATAGCTCAG????????????????????????? Silene_conica_E_EU221624 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAAT--AAAAAAAAGGGCAATCCTGAGCCAACTCC-------------TTTTTCCTTTTTT----CAAAAGCAAAAAAA-----------------------------GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTTTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTTTTT------------CTAATTTTG-AGATAT-----------------ATAAAAT--------------AATATA--------------------------TATA----------------------CTATTT------------------------TTATAGTAGAGAT-------TTATAATAGGAAATTAAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATATCCATATTTATTCATTAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTTAACAAATTCTATTTTTTT-GCATT------ACCATTTTAACGTTAAA------GATGGTTAGGTTCCTATATATAT-----------TTTTTTT-------------------------ATCTTATCACAAGTCTTATAATATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TATTTATATATTATTATAAA--------TATAAAATAATATAAAACTT----------------ATGTAAAATTTT--------TTTCTCTTTTTGAAGACCCCCAAAATGCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTTATAATTGATTAACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATG?TCGGGATAGCTCAGCTGGTAGAGCAGAGGACTGAAAATC Silene_conoidea_12655_03518 ??????????????????????AATTCAGAGAAACCCTGGAAT-AAAAAAAAAGGGCAATCCTGAGCCAACTCC-------------TTTTTCCTTTTTT----CAAAAGCAAAAAAA-----------------------------GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCTAAATCTGTTCTGTATTTTTTTTT--------------CTAATTTTG-AGATAT-----------------ATAAAAT--------------AATATA--------------------------TATA----------------------CTATT-------------------------TTATAGTAGAGATTTAT---TTATAATAGGAAATTAAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATTAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTTAACAAATTCTATTTTTTT-GCATT------ACCATTTTAACGTTAAA------GATGGTTATGTTCCTATATATAT-----------TTTTTTT-------------------------ATCTTATCATAAGTCTTATAATATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTTTTATATATTATTATTA------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCCAAAATGACGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCTTTT-TAAGTGATTAACTA------ATTGACACAAA-CCCAAATTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGCTG?????????????????????? Silene_diclinis_DIC_7_04428 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT-AAAAAAAAGGGCAATCCTGAGCCAACTCC--------------------TTTTTT----CAAAAGCAAAAAAA---GGTATTAAGAAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTTTT-------------CTAATTTTG-AGATAT-----------------ATAAAAT--------------AATATACTATTTTATATATA---------------------------------------------------------------------TATAGTAGAGATTTATAATTTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCC?????????????????????CTCCTTAACAAATTATCTTTTTTT-GCATT------ACCATTTTAAAGTTAAA------GATGGTTTTGTTCCTATATATATATA--------TTTTTT-------------------------GATCTTATTACAAGTCTTATAATATATATGATGATCTTATAATA-----------TATATGATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCCTAATCCATATTTTTACA---TTTTTATATATTA------------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGCTGGTAGAGCAGAGGACTGAAAATC Silene_dioica_D184_24_4426 ???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????AGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTTT--------------CTAATTTTG-AGATAT-----------------ATAAAAT--------------AATATAGTATTTTATATATATATA-----------------------------------------------------------------TATAGTAGAGATTTATAATTTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCT?????????????????????????????CTCCTTAACAAATTATCTTTTTTT-GCATT------ACCATTTTAAAGTTAAA------GATGGTTTTGTTCCTATATATATATA--------TTTTTT-------------------------GATCTTATTACAAGTCTTATAATATATATGATGATCTTATAATA-----------TATATGATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCCTAATCCATATTTTTACA---TTTTTATATATTA------------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGC???????????????????????? Silene_elisabethae_2470_3515 ??????????????????????AATTCAGAGAAACCCTGGAATT--AAAAAAAGGGCAATCCTGAGCCAACTCC--------------------TTTTTT----CAAAAGCAAAAAAAA---GTATTAAGAAAGCAATAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATAAATGACAACCCAAATCTGTTCTGTATTTTTTTTT--------------CTAATTTTG-AGATAT-----------------ATAAAAT--------------AATATAGTATTTTATATAT------------ATATA------------------TTTTCTATAT------------------------TTATAGTAGAGAT-------TTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTTAACAAATTATCTTTTTTT-GCATT------ACCGTTTTAAAGTTAAA------GATGGTTATGTTCCTATATATAT-----------TTTTTTTT------------------------ATCTTATCACAAGTCTTATAATATATATG----------------------------ATGATAGGAGAACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTTTTATATATTATTATTA------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAG????????????????????????? Silene_fedtschenkoana_12132_03517 ??????????????????????AATTCAGAGAAACCCTGGAATT--AAAAAAAGGGCAATCCTGAGCCAACTCC--------------------TTTTTT----CAAAAGCAAAAAAAA---TTATTAAGAAAGAAAGAAAAAA---GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCCCTAAA----TTCCAAACCAA---------GAT-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTTTTTT-----------CGAATTTTG-AGATAT-----------------ATAAAAT--------------AATATAGTATTTTATATAT------------------TTTCTATTCTTTATATATTTTCTATAT------------------------TTATAGTAGAGAT-------TTATAATAGGAAATTAAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAATTGATTAATCGGATGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAATTTTTTTCACTCCTTAACAAATTATCTTTTTTT-GCATT------ACCGTTTTAAAGTTAAA------GATGGTTATGTTCCGATATATATA----------TTTTTT-----------------------GTGATCTTATCACAAGTCTTATAATATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATATTTTTATA-----------TATTATTATTAATTTAATTATTAATATTAATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAACTCCAAGTTATCTCGTAAAATAAAATGGGGAGATGATGCACCAGAAAAAGGAATGGTCGGGATAGCTCAGCT??????????????????????? Silene_fruticosa_1064_EU308501 ACCTACTAAGTGAAAACTTCCAAATTCAGAGAAACCCTGGAATT--AAAAAAAGGGCAATCCTGAGCCAACTCC---------TTTTATTTTCCTTTTTTT---CAAACGCAAAATAAA---GGATGAAGAAAGCAAGAAAAAAA-GGGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCGTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCGAA---------AATTTTTTTAATTTT----------CTATTTTA-------------------------ATAATAT--------------AATA---TATTT-ATATATATA----------------------------------TTCTATA-------------------------TTATAGTAGAGAT-------TTAGAATAGGAAATTAAAAA--TGCAA------GAATTGTTGTGAATTGATTCCAAGTTAAAAGCGGAATCCATAT------TTATTCATGAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCAGATGAGAATAAAGATAGAGTCCCGTTTTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGTTTTTTTCACTTTTTAACAAATTATCTTTTTTT-GCATT------ACCTTTTTAAAGTTAAA------GATGGTTATGTTCCT-----------------CCTTTTTTTTTTTTTCAAAAGAGGATTTATTTTTATCTTATCACAAATCTTATAATATATAT-------------------------------GATAGGCGGACAAA-----TAAATATCTTTTATTT-----GAGCAGGTAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTATT--ATATT-------------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATAATAATACTTTTTATCTTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGCTGGTAGAGCAGAGGAC???????? Silene_heuffelii_H4_6_4339 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT-AAAAAAAAGGGCAATCCTGAGCCAACTCC--------------------TTTTTT----CAAAAGCAAAAAAA---GGTATTAAGAAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAATAAATTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTT---------------CTAATTTTG-AGATAT-----------------ATAAAAT--------------AATATAGTATTTTATA-------------------------------------------------------------------------TATAGTAGAGAT-------TTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTTAACAAATTATCTTTTTTT-GCATT------ACCATTTTAAAGTTAAA------GATGGTTTTGTTCCTATATATATATA--------TTTTTT-------------------------GATCTTATTACAAGTCTTATAATATATATGATGATCTTATAATA-----------TATATGATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCCTAATCCATATTTTTACA---TTTTTATATATTA------------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGC???????????????????????? Silene_integripetala_1920_EU ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT-AAAAAAAAAGGCAATCCTGAGCCAACTCC-----------TTTTTTTCCTT------------AGCAAAAAAA----GTATTAAGAAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCCCTAAA----TGCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATAACAACCCAAATCTGTTCTGTATTTTTTTT---------------CTAATTTTG-ATATAT-------------------------------------------------------------------------------------------ATTTTCTATA------------------------TTTAGAGTATAGAT-------TTATAATAGGAAATTAAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACGGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTTAACAAATTATCTTTTTTT-GCATTA-----GCGTTTTTAAAGTTAAA------GATGTTTATGTTTCTATATATATA---------------------------------------TTTTTCTTATCACAAGTCTTATAATATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTTTTATATATTATTA---------------------ATATAAAACTT----------------ATGTAAAAATATATACAGAGTTCCTCTTTTTGAATACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGCTGGTAGAGCAGAGGACTGAAAAT? Silene_latifolia_L121_9_3130 ????????????????????????????????????????????????????????????????????????????????????????????????????????CAAAAGCAAAAAAA---GGTATTAAGAAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTTT--------------CTAATTTTG-AGATAT-----------------ATAAAAT--------------AATATAGTATTTTATATATA---------------------------------------------------------------------TATAGTAGAGATTTATAATTTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTC????????????????????????????????CTCCTTAACAAATTATCTTTTTTT-GCATT------ACCATTTTAAAGTTAAA------GATGGTTTTGTTCCTATATATATATA--------TTTTTT-------------------------GATCTTATTACAAGTCTTATAATATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCCTAATCCATATTTTTACA---TTTTTATATATTA------------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGC???????????????????????? Silene_latifolia_L170_10_4415 ???????????????????????????????AAACCCTGGAATT-AAAAAAAAGGGCAATCCTGAGCCAACTCC--------------------TTTTTT----CAAAAGCAAAAAAA---GGTATTAAGAAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTT---------------CTAATTTTG-AGATAT-----------------ATAAAAT--------------AATATAGTATTTTATATATATATA-----------------------------------------------------------------TATAGTAGAGATTTATAATTTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA????????????????????CTCCTTAACAAATTATCTTTTTTT-GCATT------ACCATTTTAAAGTTAAA------GATGGTTTTGTTCCTATATATATATA--------TTTTTT-------------------------GATCTTATTACAAGTCTTATAATATATATGATGATCTTATAATA-----------TATATGATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCCTAATCCATATTTTTACA---TTTTTATATATTA------------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGC???????????????????????? Silene_latifolia_L200_2_4419 ??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????AAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTATTATAAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTT---------------CTAATTTTG-AGATAT-----------------ATAAAAT--------------AATATAGTATTTTATATATATATA-----------------------------------------------------------------TATAGTAGAGAT-------TTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA????????????????????CTCCTTAACAAATTATCTTTTTTT-GCATT------ACCATTTTAAAGTTAAA------GATGGTTTTGTTCCTATATATATATA--------TTTTTT-------------------------GATCTTATTACAAGTCTTATAATATATATGATGATCTTATAATA-----------TATATGATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCCTAATCCATATTTTTACA---TTTTTATATATTA------------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACTAGAAAAGGGAATGGTCGGGATAGCTCAGC???????????????????????? Silene_latifolia_L81_9_3131 ?????????????????????????????????????????????AAAAAAAAGGGCAATCCTGAGCCAACTCC--------------------TTTTTT----CAAAAGCAAAAAAA---GGTATTAAGAAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAATAAATTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTT---------------CGAATTTTG-AGATAT-----------------ATAAAAT--------------AATATAGTATTTTATA-------------------------------------------------------------------------TATAGTAGAGAT-------TTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCC???????????????????????????????CTCCTTAACAAATTATCTTTTTTT-GCATT------ACCATTTTAAAGTTAAA------GATGGTTTTGTTCCTATATATATATA--------TTTTTT-------------------------GATCTTATTACAAGTCTTATAATATATATGATGATCTTATAATA-----------TATATGATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCCTAATCCATATTTTTACA---TTTTTATATATTA------------------------ATAAAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGC???????????????????????? Silene_littorea_13501_EU221619 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT--AAAAAACGGGCAATCCTGAGCCAACTCC---------TTTTTTTTTCCTTTTGA----AAAAAGGAAAAAAA-----TATTAAGAAAACAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAATATAAGA----TTCCCTATAAA----TTACAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATAATTAATGACAACCCAAATCTGTTCTGTATTTTTTTT---------------ATAATTTTG-AGATAT-----------------ATAAAAT--------------AATATAGTATTTTATATAT------------------------------------TTTCTATAT------------------------TTATAGTAGAGAT--ATAATTTATAATAGGAAATTTAAAA--TGCAA------GAATTCTTGTGAATCGATTCCAAATTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACGCTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTTAACAAATTATCTTTTTTT-GCATT------ACCGTTTTAAAGTTAAA------GATGGTTATGTTCCTATATATATA----------TTTTTTTTTT---------------------GATCTTATCACAAGTCTTA---TATATAT-------------------------------GATAGGAGTACAAA------AAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGATTAATTC-------ATATTTTTACA---TTTATATATATTATTATTAAT-TATTA----------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-TCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATG?TCGGGATAGCTCAGCTGGTAGAGCAGAGGACTGAAAATC Silene_lydia_L_04373 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAA---AAAAAAAAGGGCAATCCTGAGCCAACTCC-------------TTTTTGCTTTTTT----CAAAAGCAAAAAAA-----------------------------GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTTTT-------------CTAATGTTG-AGATAT-----------------ATAAAAT--------------AATATA------------------------------------------------TATACTATT-------------------------TTATAGTAGAGAT-------TTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTGATTAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGACCTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTTAACAAATTCTATTTTTGT-GCATT------ACCATTTTAACGTTAAA------GATGGTTATGTTCCTATATATAT-----------TTTTTT-------------------------AATCTTATCACAAGTCTTATAATATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTTCGTTGAGTAATTCATAATCCATATTTTTACA---TTTTTTTATATTATTATTA------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCCAAAATACCGGTACTTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTAACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGCTGGTAGAGCAGAG??????????? Silene_macrodonta_13984_03522 ??????????????????????AATTCAGAGAAACCCTGGAAT--AAAAAAAAGGGCAATCCTGAGCCAACTCC-------------TTTTTCCTTTTTT----CAAAAGCAAAAAAA-----------------------------GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTTTT-------------CTAATTTTG-AGATAT-----------------ATAAAAT--------------AATATA--------------------------TATA----------------------CTATT-------------------------TTATAGTAGAGAT-------TTATAATAGGAAATTAAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATATCCATATTTATTCATTAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTTAACAAATTCTATTTTTTT-GCATT------ACCATTTTAACGTTAAA------GATGGTTAGGTTCCTATATATAT-----------TTTTTTT-------------------------ATCTTATCACAAGTCTTATAATATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTTTTATATATTATTATTA------------------ATATAAAACTT----------------ATGTAAAAATTT--------TTTCTCTTTTTGAAGACCCCCAAAATACCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTTATAATTGATTAACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGCT??????????????????????? Silene_marizii_M4_1_04341 ??????????????????????????????????????????????????????????????????????????????????????????????TTTTTT----CAAAAGCAAAAAAA---GGTATTAAGAAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTTT--------------CTAATTTTG-AGATAT-----------------ATAAAAT--------------AATATAGTATTTTATATATATATA-----------------------------------------------------------------TATAGTAGAGATTTATAATTTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTTAACAAATTATCTTTTTTT-GCATT------ACCATTTTAAAGTTAAA------GATGGTTTTGTTCCTATATATATA----------TTTTTTTT-----------------------GATCTTATTACAAGTCTTATAATATATATGATGATCTTATAATA-----------TATATGATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCCTAATCCATATTTTTACA---TTTTTATATATTA------------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCA?????????????????????????? Silene_multinervia_P_03669 ??CTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT-AAAAAAAAGGGCAATCCTGAGCCAACTCC---------TTTTTTTTTTCTTTTTT----CAAAATCAAAAAA----GGTATTAAGAAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTTTTT------------ATAATTTTT-AGATAT-----------------ATAAAAT--------------AATATAGTATTTTATATATATA-----TATTATATA------------------TTTTCTATAT------------------------TTATAGTAGAGAT-------TTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAATCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTAAACAAATTATCTTTTTTT-GCATT------ACCGTTTTAAAGTTAAA------GATGGTTATGTTCCTATATATAT-----------TTTATTTT-----------------------GATCTTATAACAAGTCTTATAATATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATAATTTTACA---TTTTTATATATTATTATTA------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGC???????????????????????? Silene_multinervia_R_04375 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT-AAAAAAAAGGGCAATCCTGAGCCAACTCC---------TTTTTTTTTTCTTTTTT----CAAAATCAAAAAA----GGTATTAAGAAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTTTTT------------ATAATTTTT-AGATAT-----------------ATAAAAT--------------AATATAGTATTTTATATATATATATTATATA-----------------------TTTTCTATAT------------------------TTATAGTAGAGAT-------TTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAATCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTAAACAAATTATCTTTTTTT-GCATT------ACCGTTTTAAAGTTAAA------GATGGTTATGTTCCTATATATAT-----------TTTATTTT-----------------------GATCTTATAACAAGTCTTATAATATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATAATTTTACA---TTTTTATATATTATTATTA------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGCTGGTAGAGCAGAG??????????? Silene_multinervia_S_03519 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT-AAAAAAAAGGGCAATCCTGAGCCAACTCC--------TTTTTTTTTTTCTTTTTT----CAAAATCAAAAAA----GGTATTAAGAAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTTTTT------------ATAATTTTT-AGATAT-----------------ATAAAAT--------------AATATAGTATTTTATATATATATATTATATA-----------------------TTTTCTATAT------------------------TTATAGTAGAGAT-------TTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAATCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTAAACAAATTATCTTTTTTT-GCATT------ACCGTTTTAAAGTTAAA------GATGGTTATGTTCCTATATATAT-----------TTTATTTT-----------------------GATCTTATAACAAGTCTTATAATATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATAATTTTACA---TTTTTATATATTATTATTA------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGCT??????????????????????? Silene_noctiflora_O_03521 ??????????????????????AATTCAGAGAAACCCTGGAATTAAAAAAAAAGGGCAATCCTGAGCCAACTCC-----------TTTTTTTCCTTTTTT----CAAAAGCAAAAAAA----GTATTAAGAAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGTTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCTGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTTAACAAATTATCTTTTTTT-GTATT------ACCATTTTAAAGTTAAA------GATGGTTATGTTCCTATATATAT----------CTTTTTTTT-----------------------GATCTTATCACAAGTCTTATAATATATAT-------------------------------GATAGGAGGGCAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTTTTTTTTATTATTAAAA------------------ATATAAAAATT----------------ATGTAAAATTAGATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-GAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATATCGTAAAA-----TGCGGAGATGATGCACCAGAAAAGGGAATG???????????????????????????????????????? Silene_noctiflora_P_04431 ???????????????????????????????????????????TAAAAAAAAAGGGCAATCCTGAGCCAACTCC-----------TTTTTTTCCTTTTTT----CAAAAGCAAAAAAA----GTATTAAGAAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGTTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCTGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA????????????????????CTCCTTAACAAATTATCTTTTTTT-GTATT------ACCATTTTAAAGTTAAA------GATGGTTATGTTCCTATATATAT----------CTTTTTTTT-----------------------GATCTTATCACAAGTCTTATAATATATAT-------------------------------GATAGGAGGGCAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTTTTTTTTATTATTAAAA------------------ATATAAAAATT----------------ATGTAAAATTAGATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-GAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATATCGTAAAA-----TGCGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGCTGGTAGAGCAGAGGACTGAAAATC Silene_pseudoatocion_7821_EU221630 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT---AAAAAAGGGCAATCCTGAGCCAACTCCTTTTTATTTTTTTATTTTCCTTTTTT----CAAAAGGAAAATAAA---GGATTAAGAAAGCAAGAAAAAAGGGGGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAAAACAAATGGGGTTGACTGTGTTATTAT---AAGTATAAGACTTCTTCCGTCTAAA----TTCCAAACCAA---------GAACAAGAA-----------------------------------AAAAGG---TGAAGAATATACGTACTGAAAAGATTAATGACAACCCGAATCTGTTCTGTATTTTTTTTTTT---AGCTATTAGCTATTTATTTAGATAT-----------------TTAAAAT--------------AATAAAATAAATAA--------------------TATATAAATATATA--------TTCTATAT------------------------TTATAGTAGAGAT-------TTAGAATAGGAAATTAAAAA--TGCAC------GAATTGTTGTGAATCGATTCCAAGTTAAAAGCGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCAAAATCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTTTACATGTCAATACTGACAACAATTAAATTTATAGTAAGAGGAAAATCCGTCGACTTTT-AAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAACCCCAAAAGATTTTTTCACTTTTTAACAAATTTTCTTTTTTTTGCATT------ACCATTTTAAAGTTAAA------GATGGTTATGTTCCT------------------CTTTTTTTTT----CAA-GGAGTATTT-TTTTTATCTTATCACAAATCTTATAATATATAT-------------------------------GATAGGCGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGTAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTTTT--------------------------------TTATAAAACTTATGTAAAATTATATACATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCCAAAATTCCGGTACCTATATAATATAATTGTAAATAATAATAATTGTAATAGTAATACTTTTTATCCTTT-TAATTGGTTGACTAGTTGACATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGCTGGTAGAGCAGAGGACTGAA???? Silene_pygmaea_13772_FN821368 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT-AAAAAAAAGGGCAATCCTGAGCCAACTCC---------TTTTATTTTCCTTTTTT----CAAAAGCAAAAGAAA---GGATTAAGAAAGCAATAAAAAAAGGGGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCGTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGGTGGTGAAGAATATACGTACTGAAATGATTAATGACAACCCGAATCTGTTCTGTATTTTATTTTTTTTT-----TTAGCTATTTTAA------------------------ATAATAG--------------AATATCGAATATA--------------TATTATATATATAAATATATA--------TTCGATATTATAA-------------------TTATAGTAGAGAT-------TTAGAATAGGAAATAAAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGCGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGACGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACACCAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTTTTTAACAAATTATCTTTTTTT-GCATT------ACCGTTTTAAAGTTAAA------GATGATTATGTTCCT-----------------CCTTTTTTTTTT---CAA-AGAGGATTCATTTTTATCTGATCACAAATCTTATAATATATATG-------------------------TATATGATAGGCGGACAAA-----GAAATATCTTTTATTT-----TAGCAGGTAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTATT--------------------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTTATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCATAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGCTGGTAGAGCAGAGGACTGAAAAT? Silene_quadriloba_12438_03535 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT--AAAAAAAGGGCAATCCTGAGCCAACTCC--------------------TTTTTT----CAAAAGCAAAAAAAAAA-GTATTAAGAAAGAAAGAAAAAA---GGATAGGTGCAGAGACTCAAAGGGAGTTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCCCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGATAACCCAAATCTGTTCTGTATTTTTTTTTT-------------CTAATTTTG-AGATAT-----------------ATAAACTACTATATATAAAATAATATAGTATTTTATA-----------TATTATATA------------------TTTTCTATAT------------------------TTATAGTAGAGAT-------TTATAATAGGAAATTTAAAA--CGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAACTTTTTTCACTCCTTAACAAATTATCTTTTTTT-GCATT------ACCGTTTTAAAGTTAAA------GATGGTTATGTTCCGATATATATA----------TTTTTT-----------------------GTGACCTTATCACAAGTCTTATAATATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GATCAGGCAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTTTTATATATTATTATTA------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAATAAAATGGGGAGATGATGCACCAGAAAAAGGAAGGGTCGGGATAGCTCAGCTGGTAGAGCAGAGGACTGAAAATC Silene_samia_7822_EU221618 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT-AAAAAAAAGGGCAATCCTGAGCCAACTCC------------TTTTTTCCTTTTTT----AAAAAGCAAAAAAAA---GTATTAAGAAAGCAAGAAAAAA---GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTTACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAAACCAAATCTGTTCTGTATTTTTTTTTT-------------CTAATTTTG-AGATAT-----------------ATAAAAT--------------AATATAGTATTTTAGATATA--TATTATATTATA--------------------TTTTCTATAT------------------------TTATAGTAGA-------------TAATAGGAAATTTAAAA--TGCAA------GAATTATTGTGAATCGATTCCAAGTTAAAAGTAGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTT----------AAAAAATTATCTTTTTTT-GCATT------ACCGTTTTAAAGTTAAAGAAGAAGATGGTTATGTTCCTATATATATATA--------TTTTTT---------------------------TCTTATCACAAGTCTTA-----------------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATGCATAATTTTAAATAAGTTTTATATATTATTATTA------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATATTATA----------------TAATTTTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAAAAAAGGGAATGGTCGGGATAGCTCAGCTGGTAGAGCAGAGGACTGAAAATC Silene_schafta_7615_02527 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT-AAAAAAAAGGGCAATCCTGAGCCAACTCC---------TTTTATTTTCCTTTTTT----CAAAAGCAAAAGAAA---GGATTAAGAAAGCAAGAAAAAAAGGGGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCGTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCGAATCTGTTCTGTATTTTTTTTTTTTTTTTTTTTTAGCTATTTTAA------------------------ATAATAG--------------AATATCGAA-----------------------------TATATA------------TTCTATATATAAATATATAGAATATATTATAATTATAGTAGAGAT-------TTAGAATAGGAAATAAAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGCGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGACGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACACCAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTTTTTAACAAATTATCTTTTTTT-GCATT------ACCGTTTTAAAGTTAAA------GATGATTATGTTCCT-----------------CCTTTTTTTT-----CAA-AGAGGATTCATTTTTATCTGATCACAAATCTTATAATATATATG-------------------------TATATGATAGGCGGACAAA-----GAAATATCTTTTATTT-----TAGCAGGTAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTATT--------------------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTTATCCTTT-TAATTGATT?ACTA------AWTGACACAAA-CCCAAGTTATCTCATAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGCTGGTAGAGCAGAGGACTGAAAATC Silene_turkestanica_12484_03526 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT-AAAAAAAAGGGCAATCCTGAGCCAACTCC----------TTTTTTTTCCTTTTTT----CAAAAGCAAAA-----------TAAGAAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGTTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCTGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTTAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTTAACAAATTATCTTTTTTT-GTATT------ACCGTTTTAAAGTTAAA------GATGGTTATGTTCTTATATATAT----------CTTTTTTTT-----------------------GATCTTATCACAAGTCTTATAATATATAT-------------------------------GATAGGAGGGCAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTTTTATATATTATTATTA------------------ATATAAAAATT----------------ATGTAAAATTAGATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-GAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATATCGTAAAA-----TGCGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGCTGGTAGAGCAGAGGACTGAAAATC Silene_uniflora_7827_EU221620 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT-AAAAAAAAGGGCAATCCTGAGCCAACTCC--------------------TTTTTT----CAAAAGCAAAAAA-----GTATTAAGAAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTATGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAT-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTTT--------------CTAATTTTG-AGATAT-----------------ATAAAAT--------------AATATAGTATTTTATATA--------------TATA------------------TTTTCTATATTT------------------ATATTTATAGTAGAGAT-------TTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAATTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTAATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTTAACAAATTATCTTTTTT--GCATT------ACCGTTTTAAAGTTAAA------GATGGTTATGTTGCTATATATAT-----------TTTTTT--------------------------ATCTTATCACAAGTCTTATAATATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGTAGGCAGTACTCCGTTGAGTAATTCATAATCCATATTCTTACA---TTTTTTTATATTATTATTA------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTTAAGACCTAAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAAAAAAGGGAATG?TCGGGATAGCTCAGCTGGTAGAGCAGAGGACTGAAAATC Silene_viscosa_7705_03529 ?????????????AAACTTTCAAATTCAGAGAAACCCTGGAATT--AAAAAAAGGGCAATCCTGAGCCAACTCC--------------------TTTTTT----CAAAAGCAAAAAAAAAA-GTATTAAGAAAGAAAGAAAAAA---GGATAGGTGCAGAGACTCAAAGGGAGTTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCCCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGATAACCCAAATCTGTTCTGTATTTTTTTTTT-------------CTAATTTTG-AGATAT-----------------ATAAAATACTATATATAAAATAATATAGTATTTTATA-----------TATTATATA------------------TTTTCTATAT------------------------TTATAGTAGAGAT-------TTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAACTTTTTTCACTCCTTAACAAATTATCTTTTTTT-GCATT------ACCGTTTTAAAGTTAAA------GATGGTTATGTTCCGATATATATA----------TTTTTT-----------------------GTGATCTTATCACAAGTCTTATAATATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GATCAGGCAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTTTTATATATTATTATTA------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCCAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAATAAAATGGGGAGATGATGCACCAGAAAAAGGAAGGGTCGG??????????????????????????????????? Silene_vulgaris_6459_03662 ???????????????????????ATTCAGAGAAACCCTGGAATT-AAAAAAAAGGGCAATCCTGAGCCAACTCC--------------------TTTTTT----CAAAAGCAAAAAA-----GTATTAAGAAAGCAAGAAAAAAA--GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTATGTTGTTAT---AAGTATAAGACTTCTTCCCTCTAAA----TTCCAAACCAA---------GAT-----------------------------------------AAAGGG---TGAAGAATATACGTACTGAAATGATTAATGACAACCCAAATCTGTTCTGTATTTTTTTTTTTT-----------CTAATTTTG-AGATAT-----------------ATAAAAT--------------AATATAGTATTATATA--------------------------------------TTTTCTATAT------------------------TTATAGTAGAGAT-------TTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAATTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTAATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGCTTTTTTCACTCCTTAACAAATTATCTTTTTT--GCATT------ACCGTTTTAAAGTTAAA------GATGGTTATGTTGCTATATATAT-----------TTTTTT--------------------------ATCTTATAACAAGTCTTATAATATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATATTCTTACA---TTTTTTTATATTATTATTA------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCTAAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAAAAAAGGGAATGGTCGGGAT???????????????????????????????? Silene_zawadzkii_2447_EU221621 ACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATT-AAAAAAAAGGGCAATCCTGAGCCAACTCC-----------TTTTTTTCCTTTTTT----CAAAAGGAAAAAAAA---GTATTAAGAAAGAAAGAAAAAA---GGATAGGTGCAGAGACTCAAAGGGAGCTGTTCTAACAAA------TGGGGTTGACTGTGTTGTTAT---AAGTATAAGACTTCTTCCCCCTAAA----TTCCAAACCAA---------GAA-----------------------------------------AAAGGG---TAAAGAATATACGTACTGAAATGATTAATGACAATCCAAATCTGTTCTGTATTTTTTTTTTT------------CTAATTTTG-AGATAT-----------------AAAAAAT--------------AATATAGTATTTTATATATA-------TATTATATATTTTCTATTCTTTATATATTTTCTATAT--------------------------------------------TTATAATAGGAAATTTAAAA--TGCAA------GAATTGTTGTGAATCGATTCCAAGTTAAAAGTGGAATCCATAT------TTATTCATCAAAACATTCACACTCA--------CTCCATAGTCTGATAGATCTTGTGAAGAACTGATTAATCGGATGAGAATAAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGCAATTTATAGTAAGAGGAAAATCCGTCGACTTTTAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA-------AAAGC-TTTTTCACTCCTTAACAAATTATATTTTTT--GCATT------ACCGTTTTAAAGTTAAA------GATGGTTATGTTCCGATATATAT-----------TTTTTTTT-----------------------GATCTTATCACAAGTCTTATAATATATAT-------------------------------GATAGGAGGACAAA-----AAAATATCTTTTATTT-----GAGCAGGCAGTACTCCGTTGAGTAATTCATAATCCATATTTTTACA---TTTTTATATATTATTATTA------------------ATATAAAACTT----------------ATGTAAAATTATATACAGAGTTCCTCTTTTTGAAGACCCCAAAAATTCCGGTACCTATA---------------------TAATTGTAATA------CTTTTCATCCTTT-TAATTGATTGACTA------ATTGACACAAA-CCCAAGTTATCTCGTAAAA-----TGGGGAGATGATGCACCAGAAAAGGGAATGGTCGGGATAGCTCAGCTGGTAGAGCAGAGGACTGAAAATC ; END; BEGIN TREES; Title trnLF_TB; LINK Taxa = taxa; TRANSLATE 1 Eudianthe_laeta_1341_EU221635, 2 Lychnis_chalcedonica_7242_EU308502, 3 Lychnis_floscuculi_2406_EU221628, 4 Lychnis_flosjovis_7566_02996, 5 Petrocoptis_pyrenaica_2486_EU221638, 6 Silene_akinfievii_6897_03536, 7 Silene_ammophila_12639_03523, 8 Silene_aprica_6271_04293, 9 Silene_conica_E_EU221624, 10 Silene_conoidea_12655_03518, 11 Silene_diclinis_DIC_7_04428, 12 Silene_dioica_D184_24_4426, 13 Silene_elisabethae_2470_3515, 14 Silene_fedtschenkoana_12132_03517, 15 Silene_fruticosa_1064_EU308501, 16 Silene_heuffelii_H4_6_4339, 17 Silene_integripetala_1920_EU, 18 Silene_latifolia_L121_9_3130, 19 Silene_latifolia_L170_10_4415, 20 Silene_latifolia_L200_2_4419, 21 Silene_latifolia_L81_9_3131, 22 Silene_littorea_13501_EU221619, 23 Silene_lydia_L_04373, 24 Silene_macrodonta_13984_03522, 25 Silene_marizii_M4_1_04341, 26 Silene_multinervia_P_03669, 27 Silene_multinervia_R_04375, 28 Silene_multinervia_S_03519, 29 Silene_noctiflora_O_03521, 30 Silene_noctiflora_P_04431, 31 Silene_pseudoatocion_7821_EU221630, 32 Silene_pygmaea_13772_FN821368, 33 Silene_quadriloba_12438_03535, 34 Silene_samia_7822_EU221618, 35 Silene_schafta_7615_02527, 36 Silene_turkestanica_12484_03526, 37 Silene_uniflora_7827_EU221620, 38 Silene_viscosa_7705_03529, 39 Silene_vulgaris_6459_03662, 40 Silene_zawadzkii_2447_EU221621; TREE trnLF_MB_con_50_majrule = (1:0.07035,5:0.035232,((2:0.01297,3:0.021553,4:0.021082):0.021974,((6:0.007587,((8:0.010666,14:0.00968,(33:0.00365,38:0.001351):0.005263):0.008615,40:0.0092):0.00447,(11:8.06E-4,12:9.47E-4,((16:8.49E-4,21:0.002622):0.001725,20:0.002903):0.001468,18:0.001661,19:8.52E-4,25:0.002079):0.007514,13:0.006666,17:0.020115,22:0.024756,((29:9.46E-4,30:9.52E-4):0.002985,36:0.004737):0.013775,34:0.020144,(37:0.002571,39:0.00177):0.011748,((((7:0.002652,9:0.001731):0.001788,24:0.002596):0.007103,10:0.008242):0.002249,23:0.011051):0.011536,(26:8.23E-4,28:0.001651,27:8.14E-4):0.010385):0.013947,((15:0.01704,(32:0.00319,35:0.001526):0.01209):0.003344,31:0.035318):0.008001):0.003367):0.011352); TREE trnLF_BS_PAUP_1 = (1,((2,(3,4)51)99,((6,(8,(14,(33,38)94)66)95,(11,12,(16,21)63,18,19,20,25)95,13,17,22,((29,30)89,36)100,34,(37,39)100,40,((((7,9)76,24)99,10)89,23)100,(26,28,27)100)99,(15,31,(32,35)100)78)63)92,5)0; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED (CHARACTERS = trnLF_indels) = unord: 1 - 195; TYPESET * UNTITLED (CHARACTERS = trnLF_dna) = unord: 1 - 1421; END; BEGIN CODONS; CODESET * UNTITLED (CHARACTERS = trnLF_dna) = universal: 1 - 1421; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED (CHARACTERS = trnLF_indels) = 'Mk1 (est.)': 1 - 195; ProbModelSet * UNTITLED (CHARACTERS = trnLF_dna) = 'Jukes-Cantor': 1 - 1421; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1295559252612; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 8605727485795499454; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 8243283546776682000; mqVersion 273; checksumv 0 2 2158047805 null getNumChars 195 numChars 195 getNumTaxa 40 numTaxa 40 short true bits 3 states 3 sumSquaresStatesOnly 9687.0 sumSquares 9687.0 NumFiles 1 NumMatrices 2 errorReportedDuringRun; mqVersion; setID 1 1442059431730877986; mqVersion 273; checksumv 1 2 4183549589 null getNumChars 1421 numChars 1421 getNumTaxa 40 numTaxa 40 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 966527.0 sumSquares 9.223372036855286E18 NumFiles 1 NumMatrices 2 errorReportedDuringRun; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 329; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 464; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; endTell; end;