#NEXUS 

Begin trees;  [Treefile saved 2011��2��9��  11:56 PM]
[!
>Data file = nuclear+plastid17706bp.nex
>Heuristic search settings:
>  Optimality criterion = parsimony
>    Character-status summary:
>      Of 17706 total characters:
>        All characters are of type 'unord'
>        All characters have equal weight
>        11600 characters are constant
>        2235 variable characters are parsimony-uninformative
>        Number of parsimony-informative characters = 3871
>    Gaps are treated as "missing"
>    Multistate taxa interpreted as uncertainty
>  Starting tree(s) obtained via stepwise addition
>  Addition sequence: random
>    Number of replicates = 1000
>    Starting seed = 1735735451
>  Number of trees held at each step during stepwise addition = 10
>  Branch-swapping algorithm: tree-bisection-reconnection (TBR)
>  Steepest descent option not in effect
>  Initial 'MaxTrees' setting = 200 (will be auto-increased by 100)
>  Branches collapsed (creating polytomies) if minimum branch length is zero ("amb-")
>  'MulTrees' option in effect
>  Topological constraints not enforced
>  Trees are unrooted
>
>Heuristic search completed
>   Total number of rearrangements tried = 30114574
>   Score of best tree(s) found = 16684
>   Number of trees retained = 1
>   Time used = 00:04:46.2
]
	Translate
		1 Albizia,
		2 Alnus,
		3 Anisophyllea,
		4 Barbeya,
		5 Begonia,
		6 Broussonetia,
		7 Cannabis,
		8 Ceanothus,
		9 Celtis,
		10 Coriaria,
		11 Cucumis,
		12 Cudrania,
		13 Datisca,
		14 Debregeasia,
		15 Dirachma,
		16 Dryas,
		17 Elaeagnus,
		18 Ficus,
		19 Filipendula,
		20 Gouania,
		21 Hippophae,
		22 Hovenia,
		23 Juglans,
		24 Morus,
		25 Myrica,
		26 Neillia,
		27 Pilea,
		28 Polygala,
		29 Quercus,
		30 Quillaja,
		31 Rhamnus,
		32 Sanguisorba,
		33 Spiraea,
		34 Stylobasium,
		35 Trema,
		36 Ulmus,
		37 Boehmeria,
		38 Zelkova
		;
tree PAUP_1 = [&U] (1,(((((((2,(23,25)),29),(3,((5,13),(10,11)))),(((((4,15),(17,21)),((8,(20,22)),31)),((((((6,18),12),24),((14,37),27)),((7,35),9)),(36,38))),((16,(19,32)),(26,33)))),30),34),28));
End;