#NEXUS [written Wed Feb 23 18:52:56 CET 2011 by Mesquite version 2.74 (build 550) at pcpats132/130.192.168.132] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=30; TAXLABELS Heterobasidion_annosum_sensu_stricto_109SA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 12SA' Heterobasidion_annosum_sensu_stricto_BM39NA Heterobasidion_annosum_sensu_stricto_BM41NF Heterobasidion_annosum_sensu_stricto_BM42SA Heterobasidion_annosum_sensu_stricto_137OC Heterobasidion_annosum_sensu_stricto_141SA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 144OB' 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 45EH' Heterobasidion_annosum_sensu_stricto_108OA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 41SB' 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 84SB' 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 89NB' 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 51OA' Heterobasidion_irregulare_38NA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 136SG' 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 115OG' 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 81EB' 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 6EA' Heterobasidion_irregulare_56EC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 10SA' 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 150EA' Heterobasidion_irregulare_3OA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 57SA' Heterobasidion_irregulare_59SA Heterobasidion_irregulare_29NA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 7NC' 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 116EG' Heterobasidion_irregulare_127NA Heterobasidion_insulare_ATCC_26719 ; END; BEGIN CHARACTERS; TITLE Heterobasidion_annosum_GST_Alignment; DIMENSIONS NCHAR=383; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = -; MATRIX Heterobasidion_annosum_sensu_stricto_109SA CTGCTCCATAATGAATACGTGTGTATCACGATATCAAGTAT-TCATCGACGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 12SA' CTGCTCCATAATGAATACGTGTGTATCACGATATCAAGTAT-TCATCGACGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA Heterobasidion_annosum_sensu_stricto_BM39NA CTGCTCCATAATGAATACGTGTGTATCACGATATCAAGTAT-TCATCGACGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA Heterobasidion_annosum_sensu_stricto_BM41NF CTGCTCCATAATGAATACGTGTGTATCACGATATCAAGTAT-TCATCGACGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA Heterobasidion_annosum_sensu_stricto_BM42SA CTGCTCCATAATGAATACGTGTGTATCACGATATCAAGTAT-TCATCGACGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA Heterobasidion_annosum_sensu_stricto_137OC CTGCTCCATAATGAATACGTGTGTATCACGATATCAAGTAT-TCATCGACGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA Heterobasidion_annosum_sensu_stricto_141SA CTGCTCCATAATGAATACGTGTGTATCACGATATCAAGTAT-TCATCGACGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 144OB' CTGCTCCATAATGAATACGTGTGTATCACGATATCAAGTAT-TCATCGACGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 45EH' CTGCTCCATAATGAATACGTGTGTATCACGATATCAAGTAT-TCATCGACGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA Heterobasidion_annosum_sensu_stricto_108OA CTGCTCCATAATGAATACGTGTGTATCATGATATCAAGTAT-TCATCGACGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 41SB' CTGCTCCATAATGAATACGTGTGTATCATGATATCAAGTAT-TCATCGACGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 84SB' CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 89NB' CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 51OA' CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA Heterobasidion_irregulare_38NA CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 136SG' CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 115OG' CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 81EB' CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 6EA' CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA Heterobasidion_irregulare_56EC CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 10SA' CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 150EA' CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA Heterobasidion_irregulare_3OA CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 57SA' CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA Heterobasidion_irregulare_59SA CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA Heterobasidion_irregulare_29NA CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 7NC' CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 116EG' CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA Heterobasidion_irregulare_127NA CTGCCCCATAATGAATACGTGT--ATCATGATATCAAGTAT-TCCTCGGCGTACGGAGAGACGACTTTCTCAAATGCGATGACCGCCGCCAATGGCTCAA Heterobasidion_insulare_ATCC_26719 CTGCCCCATGATGAATACGCGTGTATCATGATATCAAGTATATCTTCGACGTACGGAGAGACAACTTTCTCGAATGCGATGACCGCCGCCAATGGCTCAA Heterobasidion_annosum_sensu_stricto_109SA AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATAGTGCGTCTGCCTTCGCGTACTTTGTTGCAAG 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 12SA' AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATAGTGCGTCTGCCTTCGCGTACTTTGTTGCAAG Heterobasidion_annosum_sensu_stricto_BM39NA AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATAGTGCGTCTGCCTTCGCGTACTTTGTTGCAAG Heterobasidion_annosum_sensu_stricto_BM41NF AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATAGTGCGTCTGCCTTCGCGTACTTTGTTGCAAG Heterobasidion_annosum_sensu_stricto_BM42SA AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATAGTGCGTCTGCCTTCGCGTACTTTGTTGCAAG Heterobasidion_annosum_sensu_stricto_137OC AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATAGTGCGTCTGCCTTCGCGTACTTTGTTGCAAG Heterobasidion_annosum_sensu_stricto_141SA AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATAGTGCGTCTGCCTTCGCGTACTTTGTTGCAAG 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 144OB' AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATAGTGCGTCTGCCTTCGCGTACTTTGTTGCAAG 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 45EH' AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATAGTGCGTCTGCCTTCGCGTACTTTGTTGCAAG Heterobasidion_annosum_sensu_stricto_108OA AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATAGTGCGTCTGCCTTCGCGTACTTTGTTGCAAG 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 41SB' AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATAGTGCGTCTGCCTTCGCGTACTTTGTTGCAAG 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 84SB' AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACTTTGTTGCAAG 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 89NB' AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACTTTGTTGCAAG 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 51OA' AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACTTTGTTGCAAG Heterobasidion_irregulare_38NA AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACTTTGTTGCAAG 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 136SG' AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACTTTGTTGCAAG 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 115OG' AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACTTTGTTGCAAG 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 81EB' AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACTTTGTTGCAAG 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 6EA' AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACTTTGTTGCAAG Heterobasidion_irregulare_56EC AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACTTTGTTGCAAG 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 10SA' AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACGTTGTTGCAAG 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 150EA' AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACGTTGTTGCAAG Heterobasidion_irregulare_3OA AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACGTTGTTGCAAG 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 57SA' AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACGTTGTTGCAAG Heterobasidion_irregulare_59SA AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACGTTGTTGCAAG Heterobasidion_irregulare_29NA AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACTTTGTTGCAAG 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 7NC' AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACTTTGTTGCAAG 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 116EG' AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACTTTGTTGCAAG Heterobasidion_irregulare_127NA AGCTATTCTGCTCCACACTCGCGGCCTCCTCAAACAGCGCATTTGGTATGGCATCGCGTGGGATTAATGGCGCGTCTGCCTTCGCGTACTTTGTTGCAAG Heterobasidion_insulare_ATCC_26719 AGCTATTCTGCTCCACACTCGCAGCCTGCTCGAACAGCGCATTTGATATGGCATCGCGTGGAATCAATGGCGCGTCTGCCTTCGCGTACTTTGCTGCAAG Heterobasidion_annosum_sensu_stricto_109SA GTAGCGACATATAGCGCGCGATTCGTATAACACGAAACCATCGTCATCCTGGCTCAAGAATCAACGTCATGAATGAAATGATCAAGATGTATTCGATCGA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 12SA' GTAGCGACATATAGCGCGCGATTCGTATAACACGAAACCATCGTCATCCTGGCTCAAGAATCAACGTCATGAATGAAATGATCAAGATGTATTCGATCGA Heterobasidion_annosum_sensu_stricto_BM39NA GTAGCGACATATAGCGCGCGATTCGTATAACACGAAACCATCGTCATCCTGGCTCAAGAATCAACGTCATGAATGAAATGATCAAGATGTATTCGATCGA Heterobasidion_annosum_sensu_stricto_BM41NF GTAGCGACATATAGCGCGCGATTCGTATAACACGAAACCATCGTCATCCTGGCTCAAGAATCAACGTCATGAATGAAATGATCAAGATGTATTCGATCGA Heterobasidion_annosum_sensu_stricto_BM42SA GTAGCGACATATAGCGCGCGATTCGTATAACACGAAACCATCGTCATCCTGGCTCAAGAATCAACGTCATGAATGAAATGATCAAGATGTATTCGATCGA Heterobasidion_annosum_sensu_stricto_137OC GTAGCGACATATAGCGCGCGATTCGTATAACACGAAACCATCGTCATCCTGGCTCAAGAATCAACGTCATGAATGAAATGATCAAGATGTATTCGATCGA Heterobasidion_annosum_sensu_stricto_141SA GTAGCGACATATAGCGCGCGATTCGTATAACACGAAACCATCGTCATCCTGGCTCAAGAATCAACGTCATGAATGAAATGATCAAGATGTATTCGATCGA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 144OB' GTAGCGACATATAGCGCGCGATTCGTATAACACGAAACCATCGTCATCCTGGCTCAAGAATCAACGTCATGAATGAAATGATCAAGATGTATTCGATCGA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 45EH' GTAGCGACATATAGCGCGCGATTCGTATAACACGAAACCATCGTCATCCTGGCTCAAGAATCAACGTCATGAATGAAATGATCAAGATGTATTCGATCGA Heterobasidion_annosum_sensu_stricto_108OA GTAGCGACAAATAGCGCGCGATTCGTATAACACGAAACCATCGTCATCCTGGCTCAAGAATCAACGTCATGAATGAAATGATCAAGATGTATTCGATCGA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 41SB' GTAGCGACAAATAGCGCGCGATTCGTATAACACGAAACCATCGTCATCCTGGCTCAAGAATCAACGTCATGAATGAAATGATCAAGATGTATTCGATCGA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 84SB' GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGAATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 89NB' GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGAATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 51OA' GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGAATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA Heterobasidion_irregulare_38NA GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGAATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 136SG' GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGAATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 115OG' GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGAATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 81EB' GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGAATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 6EA' GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGAATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA Heterobasidion_irregulare_56EC GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGAATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 10SA' GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGAATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 150EA' GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGAATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA Heterobasidion_irregulare_3OA GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGAATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 57SA' GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGAATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA Heterobasidion_irregulare_59SA GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGAATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA Heterobasidion_irregulare_29NA GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGGATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 7NC' GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGGATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 116EG' GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGGATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA Heterobasidion_irregulare_127NA GTAGCGACAAATAGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTAGATCAAGGATCAACGTCATGAATGGGATGATCAAGATGTATTCGGTCGA Heterobasidion_insulare_ATCC_26719 ATAGCGACAAATTGCGCGCGATTCGTATAACACAAAACCATCGTCATCCTGGTTCAAGAAACAACGTCGTGAATGGGATGATTAAGATGTATTCGGACGA Heterobasidion_annosum_sensu_stricto_109SA GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGAGCCTTCTGTTCCTGCTTGAATAGATCGAC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 12SA' GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGAGCCTTCTGTTCCTGCTTGAATAGATCGAC Heterobasidion_annosum_sensu_stricto_BM39NA GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGAGCCTTCTGTTCCTGCTTGAATAGATCGAC Heterobasidion_annosum_sensu_stricto_BM41NF GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGAGCCTTCTGTTCCTGCTTGAATAGATCGAC Heterobasidion_annosum_sensu_stricto_BM42SA GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGAGCCTTCTGTTCCTGCTTGAATAGATCGAC Heterobasidion_annosum_sensu_stricto_137OC GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGAGCCTTCTGTTCCTGCTTGAATAGATCGAC Heterobasidion_annosum_sensu_stricto_141SA GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGAGCCTTCTGTTCCTGCTTGAATAGATCGAC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 144OB' GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGAGCCTTCTGTTCCTGCTTGAATAGATCGAC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 45EH' GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGAGCCTTCTGTTCCTGCTTGAATAGATCGAC Heterobasidion_annosum_sensu_stricto_108OA GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGAGCCTTCTGTTCCTGCTTGAATAGATCGAC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 41SB' GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGAGCCTTCTGTTCCTGCTTGAATAGATCGAC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 84SB' GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 89NB' GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 51OA' GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC Heterobasidion_irregulare_38NA GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 136SG' GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 115OG' GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 81EB' GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 6EA' GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC Heterobasidion_irregulare_56EC GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 10SA' GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 150EA' GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC Heterobasidion_irregulare_3OA GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 57SA' GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC Heterobasidion_irregulare_59SA GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC Heterobasidion_irregulare_29NA GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 7NC' GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 116EG' GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC Heterobasidion_irregulare_127NA GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAACGAATGATGGGGCCTTCTGTTCCTGCTTGAATAGATCGAC Heterobasidion_insulare_ATCC_26719 GAACGCACTATACATGGCACCATCGCGAAGGGATTCTTCTCAATGAACGATGGGCCCTTCTGTTCCTGCTTGAACAGATCGAC ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 383; END; BEGIN TREES; Title MP_tree_from_GST_Analysis; LINK Taxa = Taxa; TRANSLATE 1 Heterobasidion_annosum_sensu_stricto_109SA, 2 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 12SA', 3 Heterobasidion_annosum_sensu_stricto_BM39NA, 4 Heterobasidion_annosum_sensu_stricto_BM41NF, 5 Heterobasidion_annosum_sensu_stricto_BM42SA, 6 Heterobasidion_annosum_sensu_stricto_137OC, 7 Heterobasidion_annosum_sensu_stricto_141SA, 8 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 144OB', 9 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 45EH', 10 Heterobasidion_annosum_sensu_stricto_108OA, 11 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 41SB', 12 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 84SB', 13 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 89NB', 14 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 51OA', 15 Heterobasidion_irregulare_38NA, 16 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 136SG', 17 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 115OG', 18 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 81EB', 19 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 6EA', 20 Heterobasidion_irregulare_56EC, 21 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 10SA', 22 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 150EA', 23 Heterobasidion_irregulare_3OA, 24 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 57SA', 25 Heterobasidion_irregulare_59SA, 26 Heterobasidion_irregulare_29NA, 27 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 7NC', 28 'Heterobasidion irregulare - Heterobasidion annosum sensu stricto admixed genotype 116EG', 29 Heterobasidion_irregulare_127NA, 30 Heterobasidion_insulare_ATCC_26719; TREE PAUP_1 = (30,((1,2,3,4,5,6,7,8,9),10,11),(12,13,14,15,16,17,18,19,20,(21,22,23,24,25),(26,27,28,29))); END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 383; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 383; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1298483576531; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 2495559692415999648; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 591209010909576061; mqVersion 274; checksumv 0 2 1871801447 null getNumChars 383 numChars 383 getNumTaxa 30 numTaxa 30 short true bits 15 states 15 sumSquaresStatesOnly 239173.0 sumSquares 239173.0 NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 500; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #591209010909576061 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 0 -67; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; getWindow; tell It; forceAutosize; endTell; hideWindow; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;