#NEXUS [written Mon Mar 07 12:28:17 CET 2011 by Mesquite version 2.74 (build 550) at C007STAM0004/172.16.10.35] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=17; TAXLABELS Homo_sapiens Pan_troglodytes Pongo_abelii Macaca_sylvanus Papio_hamadryas Theropithecus_gelada Chlorocebus_aethiops Colobus_guereza Piliocolobus_badius Procolobus_verus Presbytis_melalophos Pygathrix_nemaeus Nasalis_larvatus Simias_concolor Rhinopithecus_avunculus Semnopithecus_entellus Trachypithecus_obscurus ; END; BEGIN CHARACTERS; TITLE IRBP3; DIMENSIONS NCHAR=1615; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = -; MATRIX Homo_sapiens GTGGAGAAGCTTTCTCCTTTCTGCTGTCATTCTAGAAGCTTCTGGGAAACCAGGGAAAGACAGCTTGGGTGTAGGTAAAAGTCATAGTAACCAGAATGTA Pan_troglodytes GTGGAGAAGCTTTCTCCTTTCTGCTGTCATTCTAGAAGCTTCTGGGAAACCAGGGAAAGACAGCTTGGGTGTAGGTAAAAGTCATAGTAACCAGAATGTA Pongo_abelii GTGGAGAAGCTTTCTCCTTTCTGCTGTCATTCTAGAAGCTTCTGGGAAACCAGGGAAAGACAGCTTAGGTGTAGGTAAAAGTCATAGTAACCAGAATGTA Macaca_sylvanus GTGGAGAAGCTTTCCCCTTTCTACTGTCATTCTAGAAGCTTCTGGGAAACCAGGGAAAGACAGCTTGAGTGTAGGTAAAAGTCATAGTAACCAGACTGTA Papio_hamadryas GTGGAGAAGCTTTCCTCTTTCTACTGTCATTCTAGAAGCTTCTGGGAAACCAGGGAAAGACAGCTTGAGTGTAGGTAAAAGTCCTAGTAACCAGACTGTA Theropithecus_gelada GTGGAGAAGCTTTCCTCTTTCTACTGTCATTCTAGAAGCTTCTGGGAAACCAGGGAAAGACAGCTTGAGTGTAGGTAAAAGTCCTAGTAACCAGACTGTA Chlorocebus_aethiops GTGGAGAAGCTTTCCCCTTTCTACTGTCATTCTAGAAGCTTCTGGGAAACCAGGGAAAGACAGCTTGAGTGTAGGTAAAAGTCATAGTAACCAGACTGTA Colobus_guereza GTGGAGAAGCTTTCCCCTTTCTACTGTCATTCTAGAAGCTTCTGGGAAACCAGGGAAAGACAGCCTGGGTGTAGGTAAAAGTCATAGTAACCAGACTGTA Piliocolobus_badius GTGGAGA---TTTCCCCTTTCTACTGTCATTCTAGAAGCTTCTGGGAAACCAGGGAAAGACAGCTTGGGTGTAGGTAAAAGTCATAGTAACCAGACTGTA Procolobus_verus GTGGAGAAGCTTTCCCCTTTCTACTGYCATTCTAGAAGCTTCTGGGAAACCAGGGAAAGACAGCTTGGGTGTAGGTAAAAGTCATAGTAACCAGACTGTA Presbytis_melalophos GTGGAGAAGCTTTCCCCTTTCTACTGTCATTCTAGAAGCTTCTGGGAAACCAGGGAAAGACAGCTTGGGTGTAGGCAAAAGTCATAGTAACC-GACTGTA Pygathrix_nemaeus GTGGAGAAGCTTTCCCCTTTCTACTGTCATTCTAGAAGCTTCTGGGAAACCAGGGAAAGACAGCTTGGGTGTAGGTAAAAGTCATAGTAACCAGACTGTA Nasalis_larvatus GTGGAGAAGCTTTCCCCTTTCTACTGTCATTCTAGAAGCTTCTGGGAAACCAGGGAAAGACAGCTTGGGTGTAGGGAAAAGTCATAGTAACCAGACTGTA Simias_concolor GTGGAGAAGCTTTCCCCTTTCTACTGTCATTCTAGAAGCTTCTGGGAAACCAGGGAAAGACAGCTTGGGTGTAGGTAAAAGTCATAGTAACCAGATTGTA Rhinopithecus_avunculus GTGGAGAAGCTTTCCCCTTTCTACTGTCATTCTAGAAGCTTCTGGGAAACCAGGGAAAGACAGCTTGGGTGTAGGTAAAAGTCATAGTAACCAGACTGTA Semnopithecus_entellus GTGGAGAAGCTTTGCCCTTTCTACTGTCATTCTAGAATCTTCTGGGAAACCAGGGAAAGACAGCTTGGGTGTAGGTAAAAGTCATAGTAACCAGACTGTA Trachypithecus_obscurus GTGGAGAAGCTTTGCCCTTTCTACTGTCATTCTAGAAGCTTCTGGGAAACCAGGGAAAGACAGCTTGGGTGTAGGTAAAAGTCATAGTAACCAGACTGTA Homo_sapiens AGGCCCTGTCCTAGTCCAGGCACTAGATGCTGCATGATCTCGAATCCCTGAAAAGCATGTATCACTATGCCCGTTTTCTAGAGG-AAAAAAAAGGGGGTG Pan_troglodytes AGGCCCTGTCCTAGTCCAGGCACTAGATG-TGCATGATCTCGAATCCCTGAAAAGCATGTATCACTATGCCCGTTTTCTAGAGG-AAAAAAAAGGGGGGG Pongo_abelii AGGCCCTGTCCTAGTCCAGGCACTAGATG-TGCATGATCTCGAATCCCTGAAAAGCATGTATCACTACGCCTGTTTTCTAGAGG-GGAAAAAAAGGGGGG Macaca_sylvanus AAGCCCTGTCCTAGTCCAGGCACTAGATG-TGCATGATCTCGAATCCCTGAAAAGCATGTATCACTACGCCCGTTTTCTAGAGG-AAAAAAAAGTGGGGA Papio_hamadryas AAGCCCTGTCCTAGTCCAGGCACTAGATG-TGCATGATCTCGAATCCCTGAAAAGCATGTATCACTACGCCCGTTTTCTAGAGG-AAAAAAAAGTGGGGA Theropithecus_gelada AAGCCCTGTCCTAGTCCAGGCACTAGATG-TGCATGATCTCGAATCCCTGGAAAGCATGTATCACTACGCCCGTTTTCTAGAGG-AAAAAAAAGTGGGGA Chlorocebus_aethiops AAGCCCTGTCCTAGTCCAGGCACTAGATG-TGCATGATCTCGAATCCCTGAAAAGCATGTATCACTACGCCCGTTTTCTAGAGG-AAAAAAAAGTGGGGA Colobus_guereza AGGCCCTGTCCTAGTCCAGGCACTAGATG-TGCATGATCTCGAATCCCTGAAAAGCATGTATCACTACGTCCATTTTCTAGAGG-AAAAAAAAGTGGGGA Piliocolobus_badius AGGCCCTGTCCTAGTCCAGGCACTAGATG-TGCATGATCTCGAATCCCTGAAAAGCATGTATCACTACGTCCATTTTCTAGAGG-AAAAAAAAGYGGGGA Procolobus_verus AGGCCCTGTCCTAGTCCAGGCACTAGATG-TGCATGATCTCGAATCCYTGAAAAGCATGTATCACTACGCCCATTTTCTAGAGG-AAAAAAAAGTGGGGA Presbytis_melalophos AGGCCCTGTCCTAGTCCAGGCACTAGATG-TGCATGATCTYGAATCCCTGAAAAGCATGTATCACTACGCCCATTKTCTAGAGG-AAGAAAAAGTGGGGA Pygathrix_nemaeus AGGCCCTGTCCTAGTCCAGGCACTAGATG-TGCATGATCTCGAATCCCTGAAAAGCATGTATCACTACGCCCATTTTCTAGAGG-AAGAAAAAGTGGGGA Nasalis_larvatus AGGCCCTATCCTAGTCCAGGCACTAGATG-TGCATGATCTCGAATCCCTGAAAAGCATGTATCACTACGCCCATTTTCTAGAGGGAAAAAAAAGTGGGGA Simias_concolor AGGCCCTGTCCTAGTCCAGGCACTAGATG-TGCATGATCTCAAATCCCTGAAAAGCATGTATCACTACGCCCATTTTCTAGAGGGAAAAAAAAGTGGGGA Rhinopithecus_avunculus AGGCCCTGTCCTAGTCCAGGCACTAGATG-TGCATGATCTCGAATCCCTGAAAAGCATGTATCACTACGCCCATTTTCTAGAGGGAAAAAAAAGTGGGGA Semnopithecus_entellus AGGCCCTGTCCTAGTCCAGGCGCTAGATG-TGCATGATCTCGAATCCCTGAAAAGCATGTATCACTACGCCCATTTTCTAGAGGGAAAAAAAAGTGGGGA Trachypithecus_obscurus AGGCCCTGTCCTAGTCCAGGCACTAGATG-TGCATGATCTCGAATCCCTGAAAAGCATGTATCACTACGCCCATTTTCTAGAGGGAAAAAAAAGTGGGGA Homo_sapiens TTGACTAGGTCAAATATCTTTTCTAGGGTCATGCAGCTAATACAGCTAATAAGTGAAACCCAAAATGTGAATATTAGTTTGTCTAATAGCCAAAATTTCC Pan_troglodytes TTGACTAGGTCAAATATCTTTTCTAGGGTCATGCAGCTAAT---------AAGTGAAACCCAAAATGTGAATATTAGTTTGTCTAATA-CCAAAATTTCC Pongo_abelii TTGACTAAGTCAAATATCTTTTCTAGGGTCATGCAGCTAAT---------AAGTGAAACCCAAAATGTGAATATTAGTTTGTCTAATA-CCAAAATTTCC Macaca_sylvanus TTGACTAGGTCAAGTATCTTTTCTAGGGTCATGCAGCTAAT---------AAGTGGAACCCAAAATGTGAATATTAGTTTGTCTAATA-CCAAAATTTCC Papio_hamadryas TTGACTAGGTCAAGTATCTTTTCTAGGGTCATGCAGCTAAT---------AAGTGGGACCCAAAATGTGAATATTAGTTTGTCTAATA-CCAAAATTTCC Theropithecus_gelada TTGACTAGGTCAAGTATCTTTTCTAGGGTCATGCAGCTAAT---------AAGTGGAACCCAAAATGTGAATATTAGTTTGTCTAATA-CCAAAATTTCC Chlorocebus_aethiops TTGACTAGGTCAAGTATCTTTTCTAGAGTCATGCAGCTAAT---------AAGTGGAACCCAAAATGTGAATATTAGTTTGTCTAATA-CCAAAATTTYC Colobus_guereza TTGACTAGGTCAAGTATCTTTTCTAGGGTCATGCAGCTAAT---------AAGTGGAACCCAAAATGTGAATAATAGTTTGTCTAATA-CCAAAATTTCC Piliocolobus_badius TTGACTAGGTCAAGTATCTTTTCTAGGGTCACGCAGCTAAT---------AAGTGGAACCCAAAATGTGAATATTAGTTTGTCTAATA-CCAAAATTTCC Procolobus_verus TTGACTAGGTCAAGTATCTTTTCTAGGGTCATGCAGCTAAT---------AAGTGGAACCCAAAATGTGAATATTAGTTTGTCTRATA-CCAAAATTTCC Presbytis_melalophos TTGACTAGGTCAAGTATCTTTTCTAGGGTCATGCAACTAAT---------AAGTGAAACCCAAAATGTGAATATTAGTTTGTCTAATA-CCAAAATTTCC Pygathrix_nemaeus TTGACTAGGCCAAGTATCTTTTCTAGGGTCATGCAGCTAAT---------AAGTGGAACCCAAAATGTGAATATTAGTTTGTCTAATA-CCAAAATTTCC Nasalis_larvatus TTGACTAGGTCAAGTATCTTTTCTAGGGTCATGCAGCTAAT---------AAGTGGAACCCAAAATGTGAATATTAGTTTGTCTAATA-CCAAAATTTCC Simias_concolor TTGACTAGGTCAAGTATCTTTTCTAGGGTCATGCAGCTAAT---------AAGTGGAACCCAAAATGTGAATATTAGTTTGTCTAATA-CCAAAATTTCC Rhinopithecus_avunculus TTGACTAGGTCAAGTATCTTTTCTAGGGTCATGCAGCTAAT---------AAGTGGAACCCAAAATGTGAATATTAGTTTGTCTAATA-CCAAAATTTCC Semnopithecus_entellus TTGACTAGGTCAAGTATCTTTTCTAGGGTCATGCAGCTAAT---------AAGTGGAACCCAAAATGTGAATATTAGTTTGTCTAATA-CCAAAATTTCC Trachypithecus_obscurus TTGACTAGGTCAAGTATCTTTTCTAGGGTCATGCAGCTAAT---------AAGTGGAACCCAAAATGTGAATATTAGTTTGTCTAATA-CCAAAATTTCC Homo_sapiens CCCAGGCTTAGCACCATAATCACCAGCCTGCAGGACAAATGCAGAATTTGAAGGATTCTCCCCGCCCCTCACCAACCCCAGTGG-CATTGCCAGTGCTCA Pan_troglodytes CCCAGGCTTAGCACCATAATCACCAGCCTGCAGGACAAATGCAGAATTTGAAGGATTCTCCCTGCCCCTCACCAACCCCAGTGGGCATTGCCAGTGCTCA Pongo_abelii CCCAGGCTTAGCACCATAATCACCAGCCTGCAGGACAAATACAGAATTTGAAGGATTCTCCCCACCCCTCACCAACCCCAGTGGGCATTTCCAGTGCTCA Macaca_sylvanus CCCAGGCTTAGCACTATGATCACCAGCCTGCGGGACAAATGCAGAATTTGAAGGATTCTCCCAGCCCCTTACCAACCCCAATGGGCATTTCCAGTGCTCA Papio_hamadryas CCCAGGCTTAGCACTATGATCACCAGCCTGCAGGACAAATGCAGAATTTGAAGGATTATCCCCGCCCCTTACCAACCCCAATGGGCATTTCCAGTGCTCA Theropithecus_gelada CCCAGGCTTAGCACTATGATCACCAGCCTGCAGGACAAATGCAGAATTTGAAGGATTCTCCCCGCCCCTTACCAACCCCAATGGGCATTTCCAGTGCTCA Chlorocebus_aethiops CCCAGGCTTAGCACTATGATCACCAGCCTGCGGGACAAATGCAGAATTTGAAGGATTCTCCCCGCCCCTTACCAACCCCAATGGGCATTTCCAGTGCGCA Colobus_guereza CCCAGGCTTAGCACCATAATCACCAGCCTGCAGGACAAATGCAGAATTTGAAGGATTCTCCCCGCCCCTTACCAACCCCAATGGGCATTTCCAGTGCTCA Piliocolobus_badius CCCAGGCTTAGCACCATAATCACCAGCCTGCAGGACAAATGCAGAATTTGAAGGATTCTCCCCGCCCCTTACCAACCCCAATGGGCATTTCCAGTGCTCA Procolobus_verus CCCAGGCTTAGCACCATAACCACCAGCCTGTAGGACAAATGCAGAATTTGAAGGATTCTCCCCGCCCCTTGCCAACCCCAATGGGCATTTCCAGTGCTCA Presbytis_melalophos CCCAGGCTTAGCACCATAATCACCAGCCTGCAGGACAAATGCAGAATTTGAAGGATTCTCTCCGCCCCTTACCAACCCCAATGGGCATTTCCAGTGCTCA Pygathrix_nemaeus CCCAGGCTTAGCACCATAATCACCAGCCTGCAGGACAAATGCAGAATTTGAAGGATTCTCCCCGCCCCTTACCAACCCCAATGGGCATTTCCAGTGCTCA Nasalis_larvatus CCCAGGCTTAGCACCATAATCACCAGCCTGCAGGACAAATGCAGAATTTGAAGGATTCTCCCCGCCCCTTACCAACCCCAATGGGCATTTCCAGTGCTCA Simias_concolor CCCAGGCTTAGCACCATAATCACCAGCCTGCAGGACAAATGCGGAATTTGAAGGATTCTCCCCGCCCCTTACCAACCCCAATGGGCATTTCCAGTGCTCA Rhinopithecus_avunculus CTCAGGCTTAGCACCATAATCACCAGCCTGCAGGACAAATGCAGAATTTGAAGGATTCTCCCCGCCCCTTACCAACCCCAATGGGCATTTCCAGTGCTCA Semnopithecus_entellus CCCAGGCTTAGCACCATAATCACCAGCCTGCAGGACAAATGCAGAATTTGAAGGATTCTCCCCACCCCTTACCAACCCCAATGGGCATTTCCAGTGCTCA Trachypithecus_obscurus CCCAGGCTTAGCACCATAATCACCAGCCTGCAGGACAAATGCAGAATTTGAAGGATTCTCCCCACCCCTTACCAACCCCAATGGGCATTTCCAGTGCTCA Homo_sapiens CAGTACTTGAGCTCTCAAGCCACAGTGCCA---CAAACTTGCCTGGAAAGGTCATGATGCTGATCGGGCTTCTGTTCCCCGCCCTGGGCCCAGAGCAGTG Pan_troglodytes CCGTACTTGAGCTCTCAAGCCACAGTGCCA---CAAACTTGCCTGGAAAGGTCATGATGCTGATCGGGCTTCTGTTCCCTGCCCTGGGCCCAGAGCAGTG Pongo_abelii CCGTACTTGAGCTCTCA-GCCACAGTGCCA---CAAACTTGCCTGAAAAGGTCATGATGCTGATCGGGCTTCTGTTCCCTGCCCTGGGCCCAGAGCAGTG Macaca_sylvanus CCATACTTGAGCTCTCA-GCTGCAGTGCCA---CAAACTTGCCTGGAAAGGTCATGATGCTCATCAGGCTCCTGTTCACTGCCCTGGACACAGAGCTGTG Papio_hamadryas CCATACTTGAGCTCTCA-GCTGCAGTGTCA---CACACTTGCCTGGAAAGGTCATGATGCTCATCAGGCTTCTGTTTACTGCCCTGGACACAGAGCTGTG Theropithecus_gelada CCATACTTGAGCTCTCA-GCTGCAGTGCCA---CACACTTGCCTGGAAAGGTCATGATGCTCATCAGGCTTCTGTTTACTGCCCTGGACACAGAGCTGTG Chlorocebus_aethiops CCATACTTGAGCTCTCA-GCTGCAGTGCCA---CACACTTGCCTGGAAAGGTCATGATGCTCATCAGGCTTCTGTTCACTGCCCTGGACACAGAGCTGTG Colobus_guereza CCATATTTGAGCTCTCA-GCTGCAGTGCCA---CACACTTGCCTGGAAAAGTCATGATGTTCATGGGGCTTCTGTTCACTGCCCTGGACACAGAGCAGTG Piliocolobus_badius CCATACTTGAGCTCTCA-GCTGCAGTGCCACCACACACTTGCCTGGAAAAGTCATGATGTTCATCGGGCTTCTGTTCACTGCCCTGGACACAGAGCAGTG Procolobus_verus CCATACTTGAGCTCTCA-GCTGCAGTGCCA---TACACTTGCCTGCAAAAGTCATGACRTTCATCGGGCTTCTGTTCACTGCCCTGGACACAGAGCAGTG Presbytis_melalophos CCATACTTGAGTTCTCA-GCTGCAGTGCCA---CACACTTGCCTGGAAAAGTCATGATGTTCATCGGGCTTCTGTTCACCGCCCTGGACACAGAGCAGTG Pygathrix_nemaeus CCATACTTGAGCTCTCA-GCTGCAGTGCCA---CACACTTGCCTGGAAAAGTCATGATGTTCATCGGGCTTCTGTTCACTGCCCTGGACACAGAGCAGTG Nasalis_larvatus CCATACTTGAGCTCTCA-GCTGCAGTGCCA---CACACTTGCCTGGAAAAGTCATGATGTTCATCGGGCTTCTGTTCACTGCCCTGGACACAGAGCAGTG Simias_concolor CCATACTTGAGCTCTCA-GCTGCAGTGCCA---CACACTTGCCTGGAAAAGTCATGATGTTCATCGGGCTTCTGTTCACTGCCCTGGACACAGAGCAGTG Rhinopithecus_avunculus CCATACTTGAGCTCTCA-GCTGCAGTGCCA---CACACTTGCCTGGAAAAGTCATGATGTTCATCGGGCTTCTGTTCACTGCCCTGGACACAGAGCAGTG Semnopithecus_entellus CCATACTTGAGCTCTCA-GCTGCAGTGCCA---CACACTTGCCTGGAAAAGTCATGATGTTCAGCGGGCTTCTGTTCACTGCCCTGGACACAGAGCAGTG Trachypithecus_obscurus CCATACTTGAGCTCTCA-GCTGCAGTGCCA---CACACTTGCCTGGAAAAGTCATGATGTTCGTCGGGCTTCTGTTCACTGCCCTGGACACAGAGCAGTG Homo_sapiens GCTATAGGAGCAAAGGCAGGACCCTGAGC----TTTACAGAACCATAACTCTCAAAGCCCCATTCCAGGGTGGATGGCCTCCATCTATCTTCCCTGCCCA Pan_troglodytes GCTATAGGAGCAAAGGCAGG-CCCTGAGA----TTTACAGAACCATAACTCTCAAAGCCCCATTCCAGGGTGGATGGCCTCCATCTATCTTCCCTGCCCA Pongo_abelii GCTATGGGAGCAAAGGCAGG-CCCTGAGC----TTTACAGWACCATAACTCTCAAAGCCCCATTCCAGGGTGGATGGCCTCCATCTATCTTCCCTGCCCA Macaca_sylvanus GCTACAGGAGCAAAGGCAGG-CCCTGAGCTAGCTTTACAGAACCATGACTCTCAAAGCCCCATTCCAGGGTGGACGGCCTCCATCTATCTTCCCTGCCCA Papio_hamadryas GCTACAGGAGCAAAGGCAGG-CCCTGAGCTAGCTTTACAGAACCATGACTCTCAAAGCCCCATTCCAGGGTGGACGGCCTCCATCTATCTTCCCTGCCCA Theropithecus_gelada GCTACAGGAGCAAAGGCAGG-CCCTGAGCTAGCTTTATAGAACCATGACTCTCAAAGCCCCATTCCAGGGTGGACGGCCTCCATCTATCTTCCCTGCCCA Chlorocebus_aethiops GCTACAGGAGCAAAGGCAGG-CCCTGAGCTAGCTTTACAGAACCATGACTCTCAAAGCCCCATTCCAGGGTGGACGGCCTCCATCTATCTTCCCTGCCCA Colobus_guereza GCTACAGGAGCAAAGGCAGG-CCCTGAGC----TTTACAGAACCATGACTCTCAAAGCCCCATTCCAGGGTGGATGGCCTCCATCTATCTTCCCTGCCCA Piliocolobus_badius GCTACAGGAGCAAAGGCAGG-CCCTGAGC----TTTACAGAACCATGACTCTCAAAGCCCCATTCCAGGGTGGATGGCCTYCATCTATCTTCCCTGCCCA Procolobus_verus GCTATAGGAGCAAAGGCAGG-CCCTGAGC----TTTACAGAACCATGACTCTCAAAGCCCCATTCCAGGGTGGATGGCCTCCATCTATCTTCCCTGCCCA Presbytis_melalophos GCTACAGAAGCAAAGGCAGG-CCCTGAGC----TTTACAGAACCATGACTCTCAAAGCACCATTCCAGGGTGGATGGCCTCCATCTATCTTCCCTGCCCA Pygathrix_nemaeus GCTAYAGGAGCAAAGGCAGG-CCCTGAGC----TTTACAGAACCATGAYTCTCAAAGCACCATTCCAGGGTGGATGGCCTCCATCTATCTTCCCTGCCCA Nasalis_larvatus GCTACAGGAGCAAAGGCAGG-CCCTGAGC----TTTACAGAACCATGACTCTCAAAGCCCCATTCCAGGGTGGATGACCTCCATCTATCTTCCCTACCCA Simias_concolor GCTACAGGAGCAAAGGCAGG-CCCTGAGC----TTTACAGAACCATGACTCTCAAAGCCCCATTCCAGGGTGGATGACCTCCATCTATCTTCCCTACCCA Rhinopithecus_avunculus GCTACAGGAGCAAAGGCAGG-CCCTGAGC----TTTACAGAACCATGACTCTCAAAGCCCCATTCCAAGGTGGATGGCCTCCATCTATCTTCCCTACCCA Semnopithecus_entellus GCTACAGGAGCAAAGGCAGG-CCCTGAGC----TTTACAGAACCATGACTCTCAAAGCCCCATTCCAGGGTGGATGGCCTCCATCTGTCTTCCCTACCCA Trachypithecus_obscurus GCTACAGGAGCAAAGGCAGG-CCCTGAGC----TTTACAGAACCATGACTCTCAAAGCCCCATTCCAGTGTGGATGGCCTCCATCTATCTTCCCTACCCA Homo_sapiens GTGTGTAAGACCAAGGAACTTGTGCTCCTACCCAACAAGAAAGGACTGGAGAGACCGATGGGGGTGTGCCTGTGACCAGAGAAACACCCCACCATTTTCA Pan_troglodytes GTGTGTAAGACCAAGGAACTTGTGCTCCTACCCAACAAGAAAGGACTGGAGAGACCGATGGGGGTGTGCCTGTGACCAGAGAAACACCCCACCATTTTCA Pongo_abelii GTATGTAAGACCAAGGAACTTGTGCTCCTATCCAACAAGAAAGGACTGGAGAGACCGATGGGGGTGTGCCTGTGACCAGAGAAACACCCCACCATTTTCA Macaca_sylvanus GTGTGTAAGACCAAGGAACTTGTGCTCCTGTCCAACGAGAAAGGACTGGAGAGATCAATGGGGGTGTGCCTGTGACCGGAGAAACACGCCATCATTTTCA Papio_hamadryas GTGTGTAAGACCAAGGAACTTGTGCTCCTATCCAACGAGAAAGGACTGGAGAGATCAATGGGGGTGTGCCTGTGACCAGAGAAACACGCCATCATTTTCA Theropithecus_gelada GTGTGTAAGACCAAGGAACTTGTGCTCCTATCCAACGAGAAAGGACTGGAGAGATCAATGGGGGTGTGCCTGTGACCAGAGAAACACGCCATCATTTTCA Chlorocebus_aethiops GTGTGTAAGACCAAGGAACTGGTGCTCCTATCCAACGAGAAAGGACTGGAGAGATCAATGGGGGTGTGCCTGTGACCAGAGAAACACCCCATCATTTTCA Colobus_guereza GTGTGTAAGACCAAGGAACTTGTGCTCCTATCCAACGAGAAAGGACTGGAGAGATCAGTGGGGGTGTGCCTGTGACCAGAGAAACACCCCATCATTTTCA Piliocolobus_badius GCGTGTAAGACCAAGGAACTTGTGCTCCTATCCAACAAGAAAGGACTGGAGAGATCAGTGGGGGTGTGCCTGTGACCAGAGAAACACCCCATCATTTTCA Procolobus_verus GTGTGTAAGACCAAGGAACTTGTGCTCCTATCCAACGRGAAAGGACTGGAGAGATCAGTGGGGGTGTGCCTGTGACCAGAGAAACACCCCATCATTTTCA Presbytis_melalophos GTGTGTAAGACCAAGGAACTTGTGCTCCTATCCAACGAGAAAGGACTGGAGAGATCAGTGGGGGTGTGCCTGTGACCAGAGAAACACCCCATCATTTTCA Pygathrix_nemaeus GTGTGTAAGACCAAGGAATTTGTGCTCCTATCCAATGAGAAAGGACTGGAGAGATCAGTGGGGGTGTGCCTGTGACCAGAGAAACACCCCATCATTTTCA Nasalis_larvatus GTGTGTAAGACCAAGGAACTTGTGCTCCTATCCAGTGAGAAAGGACTGGAGATATCAATGGGGGTGTGCCTGTGACCAGAGAAACACCCCATCATTTTCA Simias_concolor GTGTGTAAGACCAAGGAACTTGTGCTCCTATCCAATGAGAAAGGACTGGAGAGATCAATGGGGGTGTGCCTGTGACCAGAGAAACACCCCATCATTTTCA Rhinopithecus_avunculus GTGTGTAAGACCAAGGAACTTGTGCTCCTATCCAATGAGAAAGGACTGGAGAGATCAATGGGGGTGTGCCTGTGACCAGAGAAACACCCCATCATTTTCA Semnopithecus_entellus GTGTGTAAGACCAAGGAACT-GTGCTCCTATCCAACGAGAAAGGACTGGAGAGATCAATGGGGGTGTGCCTGTGACCAGAGAAACACCCCATTATTTTCA Trachypithecus_obscurus GTGTGTAAGACCAAGGAACTTGTGCTCCTATCCAACGAGAAAGGACTGGAGAGATCAATGGGGGTGTGCCTGTGACCAGAGAAACACCCCATTATTTTCA Homo_sapiens TGTCCATGCTTCTGTAATACACAGGCATTTTGCTGTAGCTCCTAGGACATACGTTCAATAATATTAC-AAGTGTAAATGCAAATCAGAACCATGGTGAAT Pan_troglodytes TGTCCATGCTTCTGTAATACACAGGCATTTTGCTGTAGCTCCTAGGACATACTTTCAATAATATTAC-AAGTGTAAATGCAAATCAGAACCA-GGTGAAT Pongo_abelii TGTCCATGCTTCTGTAATACACAGGCATTTTGCCGTAGCTCCTAGGACATACATTCAATAATATTACAAAGTGTAAATGCAAATCAGAACCA-GGCGAAT Macaca_sylvanus TGTCCATGCTTCTGTAATACACACGCATTTTGCTGTAGCTTCTAGGACATACATTCAATAATATTACGAAGTGTAAATACAAATCAGAACCA-GGTGAAT Papio_hamadryas TGTCCATGCTTCTGTAATACACAGGCATTTTGCTGTAGCTTCTAGGACATACATTCAATAATATTACGAAGTGTAAATACAAATCAGAACCA-GGTGAAT Theropithecus_gelada TGTCCATGCTTCTGTAATACACAGGCATTTTGCTGTAGCTTCTAGGACATACATTCAATAATATTACGAAGTGTAAATACAAATCAGAACCA-GGTGAAT Chlorocebus_aethiops TGTCCATGCTTCTGTAATACACAGGCATTTTGCTGTAGCTTGTAAGACATACATTCAATAATATTACGAAGTGTAAATACAAATCAGAACCA-GGTGAAT Colobus_guereza TGTCCATGCTTCTGTAATACACAGGCATTTTGCTGTAGCTTCTAGGACATACATTCAATAATATTACGAAGTGTAAATACAAATCAGAGCCA-GGTGAAT Piliocolobus_badius TGTCCATGCTTCTGTAATACACAGGCATTTTGCTGTAGCTTCTAAGACATACATTCAATAATATTACGAAGTGTAAATACAAATCAGAACCA-GGTGAAT Procolobus_verus TGTCCATGCTTCTGTAATACACAGGCATTTTGCTGTAGCTTCTAAGACATACATTCAATAATATTACGAAGTGTAAATACAAATCAGAACCA-GGTGAAT Presbytis_melalophos TGTGCATGCTTCTGTAATACACAGGCATTTTGCTGTAGCTTCTAGGACATACATTCAATAATATTACCAAGTGTAAATACAAATCAGAAACA-GGTGAAT Pygathrix_nemaeus TGTCCATGCTTCTGTAATACACAGGCATTTTGCTGTAGCTTCTAGGACATACATTCAACAATATTACCAAGTGTAAATACAAATCAGAACCA-GGTGAAT Nasalis_larvatus TGTCCATGCTTCTGTAATACACAGGCCTTTTGCTGTAGCTTCTAGGACATACATTCAATAATATTAGCAAGTGTAAATACAAATCAGAACCA-GTTGAAT Simias_concolor TGTCCATGCTTCTGTAATACACAGGCCTTTTGCTGTAGCTTCTAGGACATACATTCAATAATATTAGCAAGTGTAAATACAAATCAGAACCA-GTTGAAT Rhinopithecus_avunculus TGTCCATGCTTCTGTAATACACAGGCATTTTGCTGTAGCTTCTAGGACATACATTCAATAATATTAGCAAGTGTAAATACAAATCAGAACCA-GGTGAAT Semnopithecus_entellus TGTCCCTGCTTCTGTAATACACAGGCGTTTTGCTGTAGCTTCTAGGACATACATTCAATAATATTAGCAAGTGTAGATACAAATCAGAACCA-GGTGAAT Trachypithecus_obscurus TGTCCCTGCTTCTGTAATACACAGGCGTTTTGCTGTAGCTTCTAGGACATACATTCAATAATATTAGCAAGTGTAGATACAAATCAGAACCA-GGTGAAT Homo_sapiens TCTAAATTCAAATAGATGTTTCAAGACTGGAAGTTAAAGATAGACTCAATTCTGCAGATAATGAGGCCCCAAAACCGCAATGTCCCAAATTAATTGGGAG Pan_troglodytes TCTAAATTCAAATAGATGTT-CAAGACTGGAAGTTAAAGATAGACTCAATTCTGCAGATAATGAGGCCCCAAAACCGCAAGGTCC-----AATACGGGAG Pongo_abelii TCTAAATTCAAATAGATGTT-CAAGACTGGAAGTTAAAGATAGACTCAATTCTGCAGATAGTGAGGTCCCAAAACCCCAAGGTCC-----AATATGGGAG Macaca_sylvanus TCTAAATTCAAATAGATGTT-CAAGACTGGAAGTTAAAGATAGACTCAATTCTACAGATAGTGAGGTCCCAGAACTGTGAGGTCC-----AATATGGGAG Papio_hamadryas TCTAAATTCAAATAGATGTT-CAAGACTGGAAGTTAAAGATAGACTCAATTCTACAGATAGTGAGGTCCCAGAACTGTGAGGTCC-----AATATGGGAG Theropithecus_gelada TCTAAATTCAAATAGATGTT-CAAGACTGGAAGTTAAAGATAGACTCAATTCTACAGATAGTGAGGTCCCAGAACTGTGAGGTCC-----AATATGGGAG Chlorocebus_aethiops TCTAAATTCAAATAGATGTT-CAAGACTGGAAGTTAAAGATAGACTCAATTCTACAGATAGTGAGGTCCCAGAACCGTGAGGTCC-----AATATGGGAG Colobus_guereza TCTAAATTCAAATAGATGTT-CAAGACTGGAAGTTAAAGATAGACTCAATTCTATAGATAGTGAGGTCCCAGAACCGTGAGGTTC-----AATATGGGAG Piliocolobus_badius TCTAAATTCAAACAGATGTT-CAAGACTGGAAGTTAAAGATAGACTCAATTCTATAGATAGTGAGGTCCCAGAACCGTGAGGTCC-----AATATGGGAG Procolobus_verus TCTAAATTCAAATAGATGTT-CAAGACTGGAAGTTAAAGATAGACTCAATTCTATAGATAGTGAGGTCCCAGAACCATGAGGTCC-----AATATGGGAG Presbytis_melalophos TCTAAATTCAAATAGA----------CTGGAAGTTAAAGATAGACTCAATTCTATAGATAGTGAGGTCCCAGAACCGTGAGGTCC-----AATATGGGAG Pygathrix_nemaeus TCCAAATTCAAATAGATGTT-CAAGACTGGAAGTTAAAGATAGACTCAATTCTACAGATAGTGAGGTCCCAGAACCGTGAGGTCC-----AATATGGGAG Nasalis_larvatus TCTAAATTCAAATAGATATT-CAAGACTGGAAGTTAAAGATAGACTCAATTCTACAGATAGTGAGGTCCCAGAACCGTGAGGTCC-----AATATGGGAG Simias_concolor TCTAAATTCAAATAGATATT-CAAGACTGGAAGTTAAAGATAGACTCAATTCTACAGATAGTGAGGTCCCAGAACCGTGAGGTCC-----AATATGGGAG Rhinopithecus_avunculus TCTAAATTCAAATAGATGTT-CAAGACTGGAAGTTAAAGATAGACTCAATTCTACAGATAGTGAGGTCCCAGAACCGTGAGGTCC-----AATATGGGAG Semnopithecus_entellus TCTAAATTCAAACAGATGTT-CAAGACTGGAAGTTAAAGATAGACTCAATTCTATAGATAGTGAGGTCCCAGAACCGTGAGGTCC-----AATATGAGAG Trachypithecus_obscurus TCTAAATTCAAACAGATGTT-CAAGACTGGAAGTTAAAGATAGACTCAATTCTACAGATAGTGAGGTCCCAGAACCGTGAGGTCC-----AATATGGGAG Homo_sapiens CCAACAAGCCAACCTTGCGGCCACCAAGCATTTTGAAAATGTGGCTCTCCCAAGTTGAGATGTGCTGGAAGTGTGATGTGCTGGAAGTGTAATGTGCATA Pan_troglodytes CCA-CAAGCCA-CCT-GCGGCCACCGAGCATTT-GAAA-TGTGGCTCTCCCAAGTTGAGATGTGCTGGAAGTGT----------------AATGTGCATA Pongo_abelii CCA-CAAGCCA-CCT-GCGGCCATCGAGCATTT-GAAA-TGTGGCTCTCCCAAGTTGAGATGTGCTGGAGGTGT----------------AATGTGCATA Macaca_sylvanus CCA-CAAGCCA-CCT-GTGGCCACCGAGCATTT-GAAA-TGTGGCTCTCCCAAGTGGAGATGTGCTGGAGGTGT----------------AACGTGCATA Papio_hamadryas CCA-CAAGCCA-CCT-GTGGCCACCGAGCATTT-GAAA-TGTGGCTCTCCCAAGTGGAGATGTGCTGGAGGTGT----------------AACGTGCATA Theropithecus_gelada CCA-CAAGCCA-CCT-GTGGCCACCGAGCATTT-GAAA-TGTGGCTCTCCCAAGTGGAGATGTGCTGGAGGTGT----------------AACGTGCATA Chlorocebus_aethiops CCA-CGAGCCA-CCT-GTGGCCACCGAGCATTT-GAAA-TGTGGCTCTCCCAAGTGGAGATGTGCTGGAGGTGT----------------AACGTGCATA Colobus_guereza CCA-CAAGCCA-CCT-GCGGCCACCGAGCATTT-GAAA-TGTGGCTCTCCCAAGTTGAGATGTGCTGGAGGTAT----------------AACATGCATA Piliocolobus_badius CCA-CAAGCCA-CCT-GCGGCCACCGAGCATTT-GAAA-TGTGGCTCTCCCAAGTTGAGATGTGCTGGAGGTGT----------------AACGTGCATA Procolobus_verus CCA-CAAGCCA-CCT-GCGGCCACCGA-CATTT-GAAA-TGTGGCTCTCCCAAGTTGAGATGTGCTGGAGGTGT----------------AACGTGCATA Presbytis_melalophos CCA-CAAGCCA-CCT-GCGGCCACCGAGCATTT-GAAA-TGTGGCTCTCCCAAGTTGAGATGTGCTGGAGGTGT----------------AACGTGCATA Pygathrix_nemaeus CCA-CAAGCCA-CCT-GCGGCCACCGAGCATTT-GAAA-TGTGGCTCTCCCAAGTTGAGATGTGCTGGAGGTGT----------------AACGTGCATA Nasalis_larvatus CCA-CAAGCCA-CCT-GCGGCCACCGAGCATTT-GAAA-TGTGGCTCTCCCAAGTTGAGATGTGCTGGAGGTAT----------------AACGTGCATA Simias_concolor CCA-CAAGCCA-CCT-GCGGCCACCGAGCATTT-GAAA-TGTGGCTCTCCCAAGTTGAGATGTGCTGGAGGTAT----------------AACGTGCATA Rhinopithecus_avunculus CCA-CAAGCCA-CCT-GCGGCCACCGAGCATTT-GAAA-TGTGGCTCTCCCAAGTTGAGATGTGCTCTAGGTGT----------------AATGTGCATA Semnopithecus_entellus CCA-CAAGCCA-CCT-GCGGCCACCGAGCATTT-GAAA-TGTGGCTCTCCCAAGTTGAGATGTGCTGGAGGTGT----------------AACGTGCATA Trachypithecus_obscurus CCA-CAAGCCA-CCT-GCGGCCACCGAGCATTT-GAAA-TGTGGCTCTCCCAAGTTGAGATGTGCTGGAGGTGT----------------AACGTGCATA Homo_sapiens CCAGATTTTGAAGACATTATGAAAAGAAAA-CCTCATTAATAATTTTATTTGATTACATTTTGAAAAGAATGTATTTTGGATACATTGGCTTAAACAAAA Pan_troglodytes CCAGATCTTGAAGACATTATGAAAAGAAAA-CCTCATTAATAATTTTATTTGATTACATTTTGAAAAGAATGTATTTTGGATACATTGGCTTAAACAAAA Pongo_abelii TCAGATTTTGAAGACATTATGAAAAAAAAAACCTCATTAATAATCTTATTTGATTACATTTTGAAATGAATGTATTTTGGATACATTGGCTTAAACAAAA Macaca_sylvanus CCAGATTTTGAAGACATTACGAAAAAAAG--CCTCATTAATAATTTTATTTGATTACATTTTGAAATGGATGTATTTTGGATACATTGGCTTAAACAAAA Papio_hamadryas CCAGATTTTGAAGACATTACGGAAAAAAA--CCTCATTAATAATTTTATTTGATTACATTTTGAAATGGATGTATTTTGGATACATTGGCTTAAACAAAA Theropithecus_gelada CCAGATTTTGAAGACATTACGGAAAAAAA--CCTCATTAATAATTTTATTTGATTACATTTTGAAATGGATGTATTTTGGATACATTGGCTTAAACAAAA Chlorocebus_aethiops CCAGATTTTGAAGACATTACGAAAAAAAAA--CTCATTAATAATTTTATTTGATTACATTTTGAAATGGATATATTTTTGATACATTGGCTTAAACAAAA Colobus_guereza CCAGATTTTGAAGACATTACAAAAAAAAATACCTCATTAATAATTTTATTTGATTACATTTTGAAATGAATGTATTTTGGATACATTGGCTTAAACAAAA Piliocolobus_badius CCAGATTTTGAAGACATTACAAAAAAAAA--CCTCATTAATAATTTTATTTGATTACATTTTGAAATGAATGTATTTTGGATACATTGGCTTAAACAAAA Procolobus_verus CCAGATTTTGAAGACATTACAAAAAAAAA--CCTCATTAATAATTTTATTTGATTACATTTTGAAATGAATGTATTTTGGATACATTGSCTTAAACAAAA Presbytis_melalophos CCAGATTTTAAAGACATTACGAAAAAAATA-CCTCATTAATAATTTTATTTGATTACATTTTGAAATGAATGTATTTTGGATACATTGGCTTAAACAAAA Pygathrix_nemaeus CCAGATTTTGAAGACATTACAAAAAAAATA-CCTCATTAATAATTTTATTTGATTACATTTTGAAATGAATGTATTTTGGATACATTGGCTTAAACAAAA Nasalis_larvatus CCAGATTTTGAAGACATTACCAAAAAAAA--CCTCATTAATAATTTTATTTGATTACATTTTGAAATGAATGTATTTTGGATACATTGGCTTAAACAAAA Simias_concolor CCAGATTTTGAAGACATTACAAAAGAAAA--CCTCATTAATAATTTTATTTGATTACATTTTGAAATGAATGTATTTTGGATACATTGGCTTAAACAAAA Rhinopithecus_avunculus CCAGATTTTGAAGACATTACAAAAAAAATA-CCTCATTAATAATTTTATTTGATTACATTTTGAAATGAATGTATTTTGGATACATTGGCTTAAACAAAA Semnopithecus_entellus CCAGATTTTGAAGACATTACAAAAAAAAA--CCTCATGAATAATTTTATTTGATTACATTTTGAAATGAATGTATTTTGGATACACTGGCTTAAACAAAA Trachypithecus_obscurus CCAGATTTTGAAGACATTACAAAAAAAAA--CCTCATGAATAATTTTATTTGATTACATTTTGAAATGAATGTATTTTGGATACACTGGCTTAAACAAAA Homo_sapiens CATGATTAAAATTAACACCATGGGTTTCTTTTTGCTTGCTTAACATGGCTACTAGGGAACCTAAAATGACATCTATGGCCAGCATTCTGGCTCACGTTGC Pan_troglodytes CATGATTAAAATTAACACCATGGGTTTCTTTTTGCTTGCTTAACATGGCTACTAGGGAACCTAAAATGACATCTATGGCCAGCATTCTGGCTCACGTTGC Pongo_abelii CATGATTAAAATTAACACCATGGGTTTCTTTTTGCTTGCTTAACATGGCTACTAGAGAACCTAAAATGACATCTATGGCCAGCATTCTGGCTCACGTTGC Macaca_sylvanus CATGATTAAAATTAACACCGGGGATTTCTTTTTGCTTGCTCAACATGGCTACTAGGGAACCTAAAATGACATCTATGGGCAGCATTCTGGCTCACGTTGC Papio_hamadryas CATGATTAAAATTAACACCGTGGATTTCTTTTTGCTTGCTCAACATGGCTACTAGGGAACCTAAAATGACATCTATGGGCAGCATTCTGGCTCACGTTGC Theropithecus_gelada CATGATTAAAATTAACACCGGGGATTTCTTTTTGCTTGCTCAACATGGCTACTAGGGAACCTAAAATGACATCTATGGGCAGCATTCTGGCTCACGTTGC Chlorocebus_aethiops CATGATTAAAATTAACATCGGGGATTTCTTTTTGCTTGCTCAACATGGCTACTAGGGAACCTAAAATGACATCTATGGGCAGCATTCTGGCTCACGTTGC Colobus_guereza CATGATTAAAATTAACACCAGGGATTTCTTTTTGCTTGCTCAACATGGCTACTAGGAAACCTAAAATGACATCTATGGGCAGCATTCTGGCTCACGCTGC Piliocolobus_badius CATGATTAAAATTATCACCGGGGATTTCTTTTTGCTTGCTCAACATGGCTACTAGGGAACCTAAAATGACATCTATGGGCAGCATTCTGGCTCACGTTGC Procolobus_verus CATGATTAAAATTAACACCGGGGATTTCTTTTTGCTTGCTCAACATGGCTACTAGGGAACCTAAAATGACATCTATGGGCAGCATTCTGGCTCACGTTGC Presbytis_melalophos CATGATTAAAATTAACACCGGGGATTTCTTTTTGCTTGCTCAACATGGCTACTAGGAAACCTAAAATGACATCTACRGGCAGCATTCTGGCTCATGTTGC Pygathrix_nemaeus CATGATTAAAATTAACACTGGGGATTTCTTTTTGCTTGCTCAACATGGCTACTAGGGAACCTAAAATGACATCTATGGGCAGCATTCTGGCTCACGTTGC Nasalis_larvatus CATGATTAAAATTAACACCGGGGATTTCTTTTTGCTTGCTCAACATGGCTACTAGGGAACCTAAAATGACATCTATGGGCAGCATTCTGGCTCACGTTGC Simias_concolor CATGATTAAAATTAACACCGGGGATTTCTTTTTGCTTGCTCAACATGGCTACTAGGGAACCTAAAATGACATCTATGGGCAGCATTCTGGCTCACGTTGC Rhinopithecus_avunculus CATGATTAAAATTAACACCGGGGATTTCTTTTTGCTTGCTCAACATGGCTACTAGGGAACCTAAAATGACATCTATGGGCAGCATTCTGGGTCACGTTGC Semnopithecus_entellus CATGATTAAAATGAACACCGGGGATTTCTTTTTGCTTGCTCAACATGGCTACTAGGGAACCTAAAATGACATCTATGGGCAGCATTCTGGCTCATGTTGC Trachypithecus_obscurus CATGATTAAAATTAACACCGGGGATTTCTTTTTGCTTGCTCAACATGGCTACTAGGGAACCTAAAATGACATCTATGGGCAGCATTCTGGCTCATGTTGC Homo_sapiens ATTCCTGTTGGACAGTGCTGTCCTGGAGAGTTGTTCTTAT-ACATCACAAATTGGGCTTTTCTGAGTCCAAAGTGAAAAGGAAGTCAGGTCGGTTTAGGT Pan_troglodytes ATTCCTGTTGGACAGTGCTGTCCTGGAGAGTTGTTCTTAT-ACATCACAAATTGGGCTTTTCTGAGTCCAAAGTGAAAAGGAAGTCAGGTCGGTTTAGGT Pongo_abelii ATTCCTGTTGGACAGTGCTGTCCTGGAGGGTTGTTCTTATGACATCACAAATTGGGCTTTTCTGAGTCCAAAGTGAAAAGGAAGTCAGGTCAGTTTAGGT Macaca_sylvanus ATTCCTGTTGGACAGTGCTGTCCTAGAGGGTTGTTCTTATGACATCACAAATTGGGTTTTTCTGAGTCCAAAGTGAAAAGGAAGTCAGGTCAGTTTAAGT Papio_hamadryas ATTCCTGTTGGACAGTGCTGTCCTAGAGGGTTGTTCTTATGACATCACAAATTGGGTTTTTCTGAGTCCAAAGTGAAAAGGAAGTCAGGTCAGTTTAAGT Theropithecus_gelada ATTCCTGTTGGACAGTGCTGTCCTAGAGGGTTGTTCTTATGACATCACAAATTGGGTTTTTCTGAGTCCAAAGTGAAAAGGAAGTCAGGTCAGTTTAAGT Chlorocebus_aethiops ATTCCTGTTGGACAGTGCTGTCCTAGAGGGTTGTTCTTATGACATCACAAATTGGGTTTTTCCGAGTCCAAAGTGAAAAGGAAGTCAGGTCAGTTTAAGT Colobus_guereza ATTCCTGTCGGACAGTGCTGTCCTAGAGGGTTGTTCTTATGACATCACAAATTGGGTTTTTCTGAGTCCAAAGTGAAAAGGAAGTCAGGTCAGTTTAAGT Piliocolobus_badius ATTCCTGTCGGACAGTRCTGTCCTAGAGGATTGTTCTTATGACATCACAAATTGGGTTTTTCTGAGTCCARAGTGAAAAGGAAGTCAGGTCAGTTTAAGT Procolobus_verus ATTCCTGTCAGACAGTGCTGTCCTAGAGGGTTGTTCTTATGACATCACATATTGGGTTTTTCTGAGTCCAAAGTGAAAAGGAAGTCAGGTCAGTTTAAGT Presbytis_melalophos ATTCCTGTCGGACAGTGCTGTCCTAGAGGGTTGTTCTTATGACATCACAAATTGGGTTTTTCTGAGTCCAAAGTGAAAAGGAAGTCAGGTCAGTTTAAGT Pygathrix_nemaeus ATTCCTGTCGGACAGTGCTGTCCTAGAGGGTTGTTCTTACGGCATCACAAATTGGGTTTTTCTGAGTCCAAAGTGAAAAGGAAGTCAGGTCAGTTTAAGT Nasalis_larvatus ATTCCTGTCGGACAGTGCTGTCCTAGAGGGTTGTTCTTACGACATCACAAATTGGGTTTTTCTGAGTCCAAAGTGAAAAGGAAGTCAGGTCAGTTTAAGT Simias_concolor ATTCCTGTCGGACAGTGCTGTCCTAGAGGGTTGTTCTTACGACATCACAAATTGGGTTTTTCTGAGTCCAAAGTGAAAAGGAAGTCAGGTCAGTTTAAGT Rhinopithecus_avunculus ATTCCTGTCGGACAGTGCTGTCCTAGAGGGTTGTTCTTACGACATCACAAATTGGGTTTTTCTGAGTCCAAAGTGAAAAGGAAGTCAGGTCAGTTTAAGT Semnopithecus_entellus ATTCCTGTCGGACAGTGCTGTCCTAGAGGGTTGTTCTTATGACATCACAAATTGGGTTTTTCTGAGTCCAAAGTGAAAAGGAAGTCAGGTCAGTTTAAGT Trachypithecus_obscurus ATTCCTGTCGGACAGTGCTGTCCTACAGGGTTGTTCTTATGACATCACAAATTGGGTTTTTCTGAGTCCAAAGTGAAAAGGAAGTCAGGTCAGTTTAAGT Homo_sapiens GTTCTCATTATTCATGAAGAGAGAGGATGCTCCTTTCTCAGGAGAGTCAAGCCTTTCCTATCACTTGGCATAAAAAGGCCTCGTTGGGAGTTGTCAAGCA Pan_troglodytes GTTCTCATTATTCATGAAGAGAGAGGATGCTCCTTTCTCAGGAGAGTCAAGCCTTTCCTATCACTTGGCATAAAAAGGCCTCGTTGGGGGTTGTCAAGCA Pongo_abelii ATTCTTATTATTCATGAAGAGAGAGGACGCTCCTTTCTCAGGAGAGTCAAGCCTTTCCTATCACTTGGCATAAAAAGGCCTCGTTGGGAGTTGTCAAGCA Macaca_sylvanus GTTTTCATTATTCAAGAAGAGAGAGGACGTCCCTTTCTCAGGAGAGTCAAGTCT--CCTATCACTTGGCATAAAAAGGCCTCATTGGGAGTTGTCAAGCA Papio_hamadryas GTTTTCATTATTCATGAAGAGAGAGGACGTCCCTTTCTCAGGAGAGTCAAGTCTTTCCTATCACTTGGCATAAAAAGGCCTCATTGGGAGTTGTCAAGCA Theropithecus_gelada GTTTTCATTATTCATGAAGAGAGAGGACGTCCCTTTCTCAGGAGAGTCAAGTCTTTCCTATCACTTGGCATAAAAAGGCCTCATTGGGAGTTGTCAAGCA Chlorocebus_aethiops GTTTTCATTATTCATGAAGAGAGAGGACGTCCCTTTCTCAGGAGAGTCAAGTCTTTCCTATCACTTGGCATAAGAATGCCTCGTTGGGAGTTGTCAAGCA Colobus_guereza GTTTTCATTATTCATGAAGAGAGAGGACGTCCCTTTCTCAGGAGAGTCAAGTCTTTCCTATCACTTGGCATAAAAAGGCCTCGTTGGGAGTTGTCAAGCA Piliocolobus_badius GTTTTCATTATTCATGAAGAGAGAGGACGTCCCTTTCTCAGGAGAGTCAAGTCTTTCCTATCACTTGGCATAAAAAGGCCTCGTTGGGAGTTGTCAAGCA Procolobus_verus GTTTTCATTATTCATGAAGAGAGAGGACGTCCCTTTCTCAGGAGAGTCAAGTCTTTCCTATCACTTGGCATAAAAAGGCCTCGTTGGGAGTTGTCAAGCA Presbytis_melalophos GTTTTCATTATTCATGAAGAGAGAGGACGTCCCTTTCTCAGGAGAGTCAAGTCTTTCCTATCACTTGGCATAAAAAGGCCTCRTTGGGAGCTGTCAAGCA Pygathrix_nemaeus GTTTTCATTATTCATGAAGAGAGAGGACGTCCCTTTCTCAGGAGAGTCAAGTCTTTCCTATCACTTGGCATAAAAAGGCCTCATTGGGAGCTGTCAAGCA Nasalis_larvatus GTTTTCATTATTCATGAAGAGAGAGGACGTCCCTTTCTCAGGAGAGTCAAGTCTTTCCTATCACTTGGCATAAAAAGGCCTCATTGGGAGCTGTCAAGCA Simias_concolor GTTTTCATTATTCATGAAGAGAGAGGACGTCCCTTTCTCAGGAGAGTCAAGTCTTTCCTATCACTTGGCATAAAAAGGCCTCATTGGGAGCTGTCAAGCA Rhinopithecus_avunculus GTTTTCATTATTCATGAAGAGAGAGGACGTCCCTTTCTCAGGAGAGTCAAGTCTTTCCTATCACTTGGCATAAAAAGGCCTCATTGGGAGCTGTCAAGCA Semnopithecus_entellus GTTTTCATTATTCATGAAGAGAGAGGACGTCCCTTTCTCAGGAGAGTCAAGTCTTTCCTATCACTTGGCATAAAAAGGCCTCGTTGGGAGCTGTCAAGCA Trachypithecus_obscurus GTTTTCATTATTCATGAAGAGAGAGGACGTCCCTTTCTCAGGAGAGTCAAGTCTTTCCTATCACTTGGCATAAAAAGGCCTCGTTGGGAGCTGTCAAGCA Homo_sapiens CTGAAATCCTCGTGATTGGGCATGCATTCTTGTCCCCATTTTACGGATGCAGAAATCAAGGCTCAGAGAAGTCAAGTGGCTCACAAGTGGACACAAGGAC Pan_troglodytes CTGAAATCCTCGTGATTGGGCATGCATTCTTGTCCCCATTTTACGGATGCAGAAATCAAGGCTCAGAGAAGTCAAGTGGCTCACAAGTGGACACAAGGAC Pongo_abelii CTGAAATCCTTGTGATTAGGCATGCATTCTTGTCCCCATTTTACGGATGCAGAAATCAAGGCTCAGAGAAGTCAGATGGCTCACAAGTGGACACAAGGAC Macaca_sylvanus CTGAAATCCTCGTGATTAGGCATGCATTCTTGTCCCCATTTTACGGATGCAGAAATCAAGGCTCAGAGAAGTCAAGTGGCTCACAAGTGGACACAAGGAC Papio_hamadryas CTGAAATCCTCATGATTAGGCATGCATTCTTGTCCCCATTTTACGGATGCAGAAATCAAGGCTCAGAGAAGTCAAGTGGCTCACAAGTGGACACAAGGAC Theropithecus_gelada CTGAAATCCTCGTGATTAGGCATGCATTCTTGTCCCCATTTTACGGATGCAGAAATCAAGGCTCAGAGAAGTCAAGTGGCTCACAAGTGGACACAAGGAC Chlorocebus_aethiops CTGAAATCCTCGTGATTAGGCATGCATTCTTGTCCCCATTTTACGGATGCAGAAATCAAGGCTCAGAGAAGTCAAGTGGCTCACAAGTGGACACAAGGAC Colobus_guereza CTGAAATCCTCGTGATTGGGCATGCATTCTTGTCCCCATTTTACGGATGCAGAAATCAAGGCTCAGAGAAGTCAAGTGGCTCACAAGTGTATACAAGGAC Piliocolobus_badius CTGAAATCCTCGTGATTGGGCATGCATTCTTGTCCCCATTTTACGGATGCA-TAATCAAGGCTCAGAGAAGTCAAATGGCTCACAAGTGTACACAAGGAC Procolobus_verus CTGAAATCCTCGTGATTGGGCATGCATTCTTATCCCCATTTTACGGATGCAGAAATCAAGGCTCAGAGAAATCAAGTGGCTCACAAGTGTACACAAGGAC Presbytis_melalophos CTGAAATCCTCGTGATTGGGCTTGCATTCTTGTCCCCATTTTACGGATGCAGAAATCAAGGCTCAGAGAAGTCAAGTGGCTCACAAGTGGACACAAGGAC Pygathrix_nemaeus CTGAAATCCTCGTGATTGGGCTTGCATTCTTGTCCCCATTTTACGGATGCAGAAATCAAGGCTCAGAGAAGTCAAGTGGCTTACAAGTGGACACAAGGAC Nasalis_larvatus CTGAAATCCTCGTGATTGGGCTTGCATTCTTGTCCCCATTTTACGGATGCAGAAATCAAGGCTCAGAGAAGTCAAGTGGCTCACAAGTGGACACAAGGAC Simias_concolor CTGAAATCCTCGTGATTGGGCTTGCATTCTTGTCCCCATTTTACGGATGCAGAAATCAAGGCTCAGAGAAGTCAAGTGACTCACAAGTGGACACAAGGAC Rhinopithecus_avunculus CTGAAATCCTCGTGATTGGGCTTGCATTCTTGTCCCCATTTTACGGATGCAGAAATCAAGGCTCAGAGAAGTCAAGTGGCTCACAAGTGGACACAAGGAC Semnopithecus_entellus CTGAAATCCTCGTGATTGGGCTTGCATTCTTGTCCCCATTTTACGGATGCAGAAATCAAGGCTCAGAGAAGTCAAGTGGCTCACAAGTGGACACAAGGAC Trachypithecus_obscurus CTGAAATCCTCGTGATTGGGCTTGCATTCTTGTCCCCATTTTATGGATGCAGAAATCAAGGCTCAGAGAAGTCAAGTGGCTCACAAGTGGACACAAGGAC Homo_sapiens ACAGACCTAAA-CCCCCGGGCCTCCTCCATCACTGCAGGCCCAGGCAGGATAGAGAAGACAGGTGCTCCAGGGTCCTGACATGACCCCCATCCTGAAGGG Pan_troglodytes ACAGACCTAAA-CCCCCGGGCCTCCTCCATCACTGCAGGCCCAGGCAGGATAGAGAAGACAGGTGCTCCAGGGTCCTGACATGACCCCCATCCTGAAGGG Pongo_abelii ACAGACCGAAA-YACCCGGGACTCCTCCATCACTGTAGGCCCAGGCAGGATAGAGAAGACAGGTGCTCCAGGGTCCTGACATGACCCCCATCCTGAAAGG Macaca_sylvanus ACAGACCGAAA-CCCCAGGGCCTCCTCCATCACTGCAGGCCCAGGCAGGATAGAGAAGACAGGTGCTCCAGGGTCCTGACATGACCCCTATCCTGAAGGG Papio_hamadryas ACAGACTGAAA-CCCCAGGGCCTCCTCCATCACTGCAGGCCCAGGCAGGATAGAGAAGACAGGTGCTCCAGGGTCCTGACATGACCCCTATCCTGAAGGG Theropithecus_gelada ACAGACCGAAA-CCCCAGGGCCTCCTCCATCACTGCAGGCCCAGGCAGGATAGAGAAGACAGGTGCTCCAGGGTCCTGACATGACCCCTATCCTGAAGGG Chlorocebus_aethiops ACAGACCGAAA-CCCCAGGGCCTCCTCCATCACTGCAGGTCCAGGCAGGATAGAGAAGACAGGTGCTCCAGGGTCCTGACATGACCCCCATCCTGAAGGG Colobus_guereza ACAGACCAAAA-CCCCAGGGCCTCCTCCATCACTGCAGGCCCAGGCAGGATAGAGAAGACAGGTGTTCCAGGGTCCTGACATGACCCCCATCCTGAAGGG Piliocolobus_badius ACAGACCAAAAACCCCAGGGCCTCCTCCATCACTGCAGGCCCAGGCAGGATAGAGAAGACAGGTGTTCCAGGGTCCTGACATGACCCCCATCCTGAAGGG Procolobus_verus ACAGACCAAAA-CCCCAGGGCCTCCTCCAACACTGCAGGCCCAGGCAGGATAGAGAAGGCAGGTGTTCCAGGGTCCTGACATGACCCCCATCCTGAAGGG Presbytis_melalophos ACAGACCAAAA-CCCCAGGGCCTCCCCCATCACTGCAGGCCCAGGCAGKATAGAGAAGACAGGTGCTCCAGGG-CCTGACATGACCCCCATCCTGAAGGG Pygathrix_nemaeus ACAGACCAAAA-CCCCAGGGCCTCCTCCATCACTGCAGGCCCAGGCAGGATAGAGAAGACAGGTGCTCCAGGGTCCTGACATGACCCCCATCCTGAAGGG Nasalis_larvatus ACAGACCAAAA-CCCCAGGGCCTCCTCCATCACTGCAGGCCCAGGAAGGATAGAGAAGACAGGTGCTCCAGGGTCCTGACRTGACCCCCATCCTGAAGGG Simias_concolor ACAGACCAAAA-CCCCAGGGCCTCCTCCATCACTGCAGGCCCAGGAAGGATAGAGAAGACAGGTGCTCCAGGGTCCTGACATGACCCCCATCCTGAAGGG Rhinopithecus_avunculus ACAGACCAAAA-CCCCAGGGCCTCCTCCATCACTGCAGGCCCAGGCAGGATAGAGAAGACAGGTGCTCCAGGGTCCTGACATGACCCCCATCCTGAAGGG Semnopithecus_entellus ACAGACCAAAA-CCCCAGGGCCTCCTCCATCACTGCAGGCCCAGGCAGGATAGAGAAGACAAGTGCTCCAGGGTCCTGACATGACCCCCATCCTGAAGGG Trachypithecus_obscurus ACAGACCAAAA-CCCCAGGGCCTCCTCCATCACTGCAGGCCCAGGCAGGATAGAGAAGACAGGTGCTCCAGGGTCCTGACATGACCCCCATCCTGAAGGG Homo_sapiens CCTTATGTCTTCCAG Pan_troglodytes CCTTCTGTCTTCCAG Pongo_abelii CCTTCTGTCTTCCAG Macaca_sylvanus CCTTATGTCTTCCAG Papio_hamadryas CTTTATGTCTTCCAG Theropithecus_gelada CCTTATGTCTTCCAG Chlorocebus_aethiops CCTTATATCTTCCAG Colobus_guereza CCTTGTGTCTTCCAG Piliocolobus_badius CCTT-TGTCTTCCAG Procolobus_verus CCTTATGTCTTCCAG Presbytis_melalophos CCTTATGTCTTCCAG Pygathrix_nemaeus CCTTATGTCTTCCAG Nasalis_larvatus CCTTATGTCTTCCAG Simias_concolor CCTTATGTCTTCCAG Rhinopithecus_avunculus CCTTATGTCTTCCAG Semnopithecus_entellus CCTTATGTCTTCCAG Trachypithecus_obscurus CCTTATGTCTTCCAG ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 1615; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 1615; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1615; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1299497297356; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 257290882218903101; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 303526169427783729; mqVersion 274; checksumv 0 2 2833156607 null getNumChars 1615 numChars 1615 getNumTaxa 17 numTaxa 17 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 566369.0 sumSquares -5.072854620270125E19 NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 512; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1193 500; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #303526169427783729 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 211; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 681 433; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;