NEXUS
[File created by TreeBASE:  7/26/07  21:04:19]
[Matrix accession#: M1769]

BEGIN TAXA;
	TITLE M1769;
	DIMENSIONS  NTAX=9;
	TAXLABELS
		Reticulitermes_tibialis_Ag	Reticulitermes_tibialis_Fs	Reticulitermes_arenincola_Sd	Reticulitermes_flavipes_Wl	Reticulitermes_flavipes_Sm	Reticulitermes_flavipes	Reticulitermes_hageni	Reticulitermes_virginicus	Coptotermes_formosanus
	;
END;

BEGIN CHARACTERS;
	TITLE M1769;
	DIMENSIONS NCHAR=1590;
	FORMAT DATATYPE = DNA MISSING = N GAP = -  ;
	MATRIX
		Reticulitermes_tibialis_Ag         ATGACAACATGATTAAACATAAGACTACAGGACGGAGCATCTCCCATCATAGAACAAATAATCTTCTTCCACGATCATACATTAATAATTATATTAATAATTATTACAACCGTAATGTACATAATAACCACGTTACTTTGAAATAAGCATACTAGACGATTCATATTAGAAGGACAACTAATTGAAACTACATGAACAATCGCGCCGGCAATCATCCTGGTATTCATTGCAATACCATCCTTACGACTCCTATATCTAATAGACGAAATTCATAACCCAGCAATAACCCTAAAAGCAGTAGGACATCAATGATACTGAAGATATGAATATTCAGACTTCACAAAACTAGAATTTGACTCTTACATAATCCCACAGGAAGAAAATCAAATAAGAACCTTCCGACTATTAGATACAGACAACCGAATTGTACTACCCATAAACTCACCAATTCGAATAGTAGTAACAGCAGCAGACGTGCTACACTCATGAACAATTCCAAGATTAGGCGTGAAAACGGACGCTACACCAGGACGATTAAATCAAACAAGATTCTCAATCAACCACCCCGGTGTTCTATACGGACAGTGCTCAGAAATCTGCGGGGCAAATCACAGATTTATACCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGCCTAAGAGAACTTAATCCAACATCGAGGTCGCAAACCCCCCTGCCGATAAGAACTCTCAAGGGGGATAACGCTGTTATCCCTAAGGTAATTTAATCTTACAATCAAAATTAATGGATCAAGTAAATATAAATAAATATAACAACCTAAAGGAGGGGTTAAATAA-ATCCCTCCCATCACCCCAACAAAACATACTAAACGG-CCTAGTGAACCCTCACAAACAGAAAAGGACCAT-AA---TAAATGTTAAACTCTATAGGGTCTTCTCGTCCCATAAAAACATCTAAGAATTTTAACTCAAAGACCAAATTCAATAAACAATTCAAAATTAAGACAGCCCATGCCTCGTCAAGCCATTCATACCAGATCACAATTAAAGAACTAATGACTATGCTACCTTTGCACGGTCAAAATACCGCGGCCCTTCAACA-TCAAAGTCAGTGGGCAGGCCATACTTCAAAAACTAATACTATGTTACGACTTATCTCATTAACAAAT-AAACGAGAGCGACGGGCGATGTGTACATATCTCAGAACCAATTATCACAAAAACAATCTTCAAAACATTACAATCAAATCCAATTTCATGCCAGTAATTAAAACCAACAATCCAAAA-CAACAAATAACAATGTAACCCACCAA-TACACTTAGAGA-AAGCTGCACCTTGACCTGAAATTAAACCAAATAAAGGAACAAGAAAATTATATAACCCTAAAAAGATAATCAATAAACGGCGGTATACAAACCAAT-AAACAACTAAGTAAGGTCCAACGCGGACTATCGATAACGAGACAGGTTCCTCTGAGCGGAATAAGATACCGCCAAATTCTTTAAGTTTCAAGAACATAACTAATACTACTCAGGC-AAAACATTAACATCCAAAAATAATAGGGTATCTAATCCTAGTTT
		Reticulitermes_tibialis_Fs         ATGACAACATGATTAAACATAAGACTACAGGACGGAGCATCTCCCATCATAGAACAAATAATCTTCTTCCACGATCATACATTAATAATTATATTAATAATTATTACAACCGTAATGTACATAATAACCACGTTACTTTGAAATAAGCATACTAGACGATTCATATTAGAAGGACAACTAATTGAAACTACATGAACAATCGCGCCGGCAATCATCCTGGTATTCATTGCAATACCATCCTTACGACTCCTATATCTAATAGACGAAATTCATAACCCAGCAATAACCCTAAAAGCAGTAGGACATCAATGATACTGAAGATATGAATATTCAGACTTCACAAAACTAGAATTTGACTCTTACATAATCCCACAGGAAGAAAATCAAATAAGAACCTTCCGACTATTAGATACAGACAACCGAATTGTACTACCCATAAACTCACCAATTCGAATAGTAGTAACAGCAGCAGACGTGCTACACTCATGAACAATTCCAAGATTAGGCGTGAAAACGGACGCTACACCAGGACGATTAAATCAAACAAGATTCTCAATCAACCACCCCGGTGTTCTATACGGACAGTGCTCAGAAATCTGCGGGGCAAATCACAGATTTATACCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGCCTAAGAGAACTTAATCCAACATCGAGGTCGCAAACCCCCCTGCCGATAAGAACTCTCAAGGGGGATAACGCTGTTATCCCTAAGGTAATTTAATCTTACAATCAAAATTAATGGATCAAGTAAATATAAATAAATATAACAACCTAAAGGAGGGGTTAAATAA-ATCCCTCCCATCACCCCAACAAAACATACTAAACGG-CCTAGTGAACCCTCACAAACAGAAAAGGACCAT-AA---TAAATGTTAAACTCTATAGGGTCTTCTCGTCCCATAAAAACATCTAAGAATTTTAACTCAAAGACCAAATTCAATAAACAATTCAAAATTAAGACAGCCCATGCCTCGTCAAGCCATTCATACCAGATCACAATTAAAGAACTAATGACTATGCTACCTTTGCACGGTCAAAATACCGCGGCCCTTCAACA-TCAAAGTCAGTGGGCAGGCCATACTTCAAAAACTAATACTATGTTACGACTTATCTCATTAACAAAT-AAACGAGAGCGACGGGCGATGTGTACATATCTCAGAACCAATTATCACAAAAACAATCTTCAAAACATTACAATCAAATCCAATTTCATGCCAGTAATTAAAACCAACAATCCAAAA-CAACAAATAACAATGTAACCCACCAA-TACACTTAGAGA-AAGCTGCACCTTGACCTGAAATTAAACCAAATAAAGGAACAAGAAAATTATATAACCCTAAAAAGATAATCAATAAACGGCGGTATACAAACCAAT-AAACAACTAAGTAAGGTCCAACGCGGACTATCGATAACGAGACAGGTTCCTCTGAGCGGAATAAGATACCGCCAAATTCTTTAAGTTTCAAGAACATAACTAATACTACTCAGGC-AAAACATTAACATCCAAAAATAATAGGGTATCTAATCCTAGTTT
		Reticulitermes_arenincola_Sd       ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTAATCTTCTTCCACGATCATACATTAATAATCATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATCATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTACATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGGGTGAAAACAGACGCCACACCAGGGCGACTAAATCAAGTAAGATTCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGTCTAAGAGAACTTAATCCAACATCGAGGTCGCAAACCCCCCTGCCGATAAGAACTCTCAAGGGAGATAACGCTGTTATCCCTAAGGTAATTTAATCTTACAATCAAAATAAATGGATCAAGCAAATATAAATAAATATAACAACACAAAGGAGGGGTTAAATAATATCCCTCCCATCACCCCAACAAAACATATTAAACAGCCCTAGTGAACCCTCACAAACAGAAAGAGACCAT-AA---TAAATGTCAAACTCTATAGGGTCTTCTCGTCCCATAAAAACATCTAAGAATTTTAACTCAAAGACCAAATTCAATAAACAATTCAAAATTAAGACAGCTTATGCCTCGTCAAGCCATTCATACCAGATCACAATTAAAGAACTAATGACTATGCTACCTTTGCACGGTCAAAATACCGCGGCCCTTCAACATTCAAGGTCAGTGGGCAGGCCATACTTCAAAAACTAATACTATGTTACGACTTATCTCATTAACAAATAAAACGAGAGCGACGGGCGATGTGTACATATCTCAGAACCAATTATCACAAAAACAATCTTCAAAATATTACAATCAAATCCAATTTCATGTCAGTAATTAAAACCAACAATCCAAA---CACAAATAACAATGTAACCCACCAA-AACACTTAGAGA-AAGCTGCACCTTGACCTGAAATAAAACCAAATATAGGAACAAGAAAATTACATGACCCTAAAAAGATAATCAATAAACGGCGGTATACAAACCAAC-AAACAACCAAGTAAGGTCCAACGTGGACTATCGATAACGAGACAGGTTCCTCTGAACGGAATAAGATACCGCCAAATTCTTTAAGTTTCAAGAACATAACTAATACTACTCAGGC-AAAACATTAACATCCAAAAATAATAGGGTATCTAATCCTAGTTT
		Reticulitermes_flavipes_Wl         ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTAATCTTCTTCCACGATCATACATTAATAATCATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATCATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTACATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGGGTGAAAACAGACGCCACACCAGGGCGACTAAATCAAGTAAGATTCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGTCTAAGAGAACTTAATCCAACATCGAGGTCGCAAACCCCCCTGCCGATAAGAACTCTCAAGGGAGATAACGCTGTTATCCCTAAGGTAATTTAATCTTACAATCAAAATAAATGGATCAAGCAAATATAAATAAATATAACAACACAAAGGAGGGGTTAAATAATATCCCTCCCATCACCCCAACAAAACATATTAAACAGCCCTAGTGAACCCTCACAAACAGAAAGAGACCAT-AA---TAAATGTCAAACTCTATAGGGTCTTCTCGTCCCATAAAAACATCTAAGAATTTTAACTCAAAGACCAAATTCAATAAACAATTCAAAATTAAGACAGCTTATGCCTCGTCAAGCCATTCATACCAGATCACAATTAAAGAACTAATGACTATGCTACCTTTGCACGGTCAAAATACCGCGGCCCTTCAACATTCAAGGTCAGTGGGCAGGCCATACTTCAAAAACTAATACTATGTTACGACTTATCTCATTAACAAATAAAACGAGAGCGACGGGCGATGTGTACATATCTCAGAACCAATTATCACAAAAACAATCTTCAAAATATTACAATCAAATCCAATTTCATGTCAGTAATTAAAACCAACAATCCAAA---CACAAATAACAATGTAACCCACCAA-AACACTTAGAGA-AAGCTGCACCTTGACCTGAAATAAAACCAAATATAGGAACAAGAAAATTAAATGACCCTAAAAAGATAATCAATAAACGGCGGTATACAAACCAAC-AAACAACCAAGTAAGGTCCAACGTGGACTATCGATAACGAGACAGGTTCCTCTGAACGGAATAAGATACCGCCAAATTCTTTAAGTTTCAAGAACATAACTAATACTACTCAGGC-AAAACATTAACATCCAAAAATAATAGGGTATCTAATCCTAGTTT
		Reticulitermes_flavipes_Sm         ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTATATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGTGTGAAAACAGACGCCACACCAGGACGACTAAATCAAGTAAGATTCTCAATCAATCACCCGGGTATCCTATCCGGACAGTGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGTCTAAGAGAACTTAATCCAACATCGAGGTCGCAAACCCCCCTGCCGATAAGAACTCTCAAGGGAGATAACGCTGTTATCCCTAAGGTAATTTAATCTTACAATCAAAATAAATGGATCAAGCAAATATAAATAAATATAACAACACAAAGGAGGGGTTAAATAATATCCCTCCCATCACCCCAACAAAACATATTAAACAGCCCTAGTGAACCCTCACAAACAGAAAGAGACCGTGAA---TAAATGTTAAACTCTATAGGGTCTTCTCGTCCCATAAAAACATCTAAGAATTTTAACTCAAAGACCAAATTCAATAAACAATTCAAAATTAAGACAGCTTATGCCTCGTCAAGCCATTCATACCAGATCACAATTAAAGAACTAATGACTATGCTACCTTTGCACGGTCAAAATACCGCGGCCCTTCAACATTCAAGGTCAGTGGGCAGGCCATACTTCAAAAACTAATACTATGTTACGACTTATCTCATTAACAAATAAAACGAGAGCGACGGGCGATGTGTACATATCTCAGAACCAATTATCACAAAAACAATCTTCAAAATATTACAATCAAATCCAATTTCATGCCAGTAATTAAAACCAACAATCCAAA---CACAAATAACAATGTAACCCACCAA-AACACTTAGAGA-AAGCTGCACCTTGACCTGAAATCAAACCAAATATAGGAACAAGAAAATTATATGACCCTAAAAAGATAATCAATAAACGGCGGTATACAAACCAAT-AAACAACCAAGTAAGGTCCAACGTGGACTATCGATAACGAGACAGGTTCCTCTGAACGGAATAAGATACCGCCAAATTCTTTAAGTTTCAAGAACATAACTAATACTACTCAGGC-AAAACATTAACATCCAAAAATAATAGGGTATCTAATCCTAGTTT
		Reticulitermes_flavipes            ATGACAACATGATTAAACATAAGACTACAAGACGGAGCATCTCCCATCATAGAACAACTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATGATAACCACCCTACTTTGAAATAAACATACTAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCTTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAAGCAGTGGGACATCAATGATACTGAAGATATGAATATTCAGACTTCACAAAATTAGAATTCGACTCTTACATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTAGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGGGTGAAAACAGACGCTACACCAGGACGACTAAATCAAGCAAGATTCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGTCTAAGAGAACTTAATCCAACATCGAGGTCGCAAACCCCCCTGCCGATAAGAACTCTCAAGGGAGATAACGCTGTTATCCCTAAGGTAATTTATTCTTACAAT-AAAATAAATGGGATAAGCAAATATAAATAAATATAACAACATAAAGGAGGGGTTAAACAATATCCCTCCCATCACCCCAACAAAACATATTAAACAGCCCTAGTGAACCCTCACAAACAGAAAGAGACCAT-AA---TAAATGTAAAACTCTATAGGGTCTTCTCGTCCCATAAAAACATCTAAGAATTTTAACTCAAAGACCAAATTCAATAAACAATTCAAAATTAAGACAGCTCATGCCTCGTCAAGCCATTCATACCAGATCACAATTAAAGAACTAATGACTATGCTACCTTTGCACGGTCAAAATACCGCGGCCCTTCAACATTCAAGGTCAGTGGGCAGGCCATACTTCAAAAACTAATACTATGTTACGACTTATCTCATTAACAAATAAAACGAGAGCGACGGGCGATGTGTACATATCTCAGAACCAATTATCACAAAAACAATCTTCAAAATATTACAATCAAATCCAATTTCATGTCAGTAATTAAAACCAACAATCCAAA---CACAAATAACAATGTAACCCACCAA-AACACTTAGAGA-AAGCTGCACCTTGACCTGAAATTAAACCAAATATAGGAACAAGAAAATTACATGACCCTAAAAAGATAATCAATAAACGGCGGTATACAAACCAAT-AAACAACCAAGTAAGGTCCAACGTGGACTATCGATAACGAGACAGGTTCCTCTGAACGGAATAAGATACCGCCAAATTCTTTAAGTTTCAAGAACATAACTAATACTACTCAGGC-AAAAAATTAACATCCAAAAATAATAGGGTATCTAATCCTAGTTT
		Reticulitermes_hageni              ATGACAACATGATTAAACATAAGACTACAAGACGGAGCATCTCCCATCATAGAACAACTGATCTTCTTCCATGACCATACATTAATAATCATATTAATAATCATCACAACCGTAATGTACATAATAACTACCCTACTTTGGAATAAACACACTAGACGATTTATATTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATCATCCTAGTATTCATTGCAATACCATCCTTACGACTCCTATACCTAATAGACGAAATCCACAACCCGACAATAACTCTAAAAGCAGTAGGACACCAATGGTACTGGAGATATGAATACTCAGACTTCACAAAATTAGAATTTGACTCTTACATAATTCCACAGGAGGAAAATCAAACAAGAACCTTCCGACTACTAGACACAGACAACCGAATCGTACTACCCATAAACTCACCAATCCGACTAGTAGTAACAGCAGCAGACGTATTACACTCATGAACAATTCCAAGACTAGGGGTGAAAACAGACGCCACACCGGGACGGCTAAATCAATCAAGATTCTCAATCAATCACCCAGGTATCCTATATGGACAATGCTCAGAAATCTGTGGAGCAAATCATAGATTTATGCCTATCACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGCCTAAGAGAACTTAATCCAACATCGAGGTCGCAAACCCCCCTGCCGATAAGAACTCTCAAGGGAGATAACGCTGTTATCCCTAAGGTAATTTAATCTTACAATCAAAATAAATGGATCAAACAAATATAAATAAATATAACAACACAAAGGAGGGGTTAAATTATATCCCTCCCATCACCCCAACAAAACATACTAAATGGCCC-AGTGAAACCTCACAAAC-GAAAAGAGACCAT-A---TAAATGTCAAACTCTATAGGGTCTTCTCGTCCCATAAAAACATCTAAGAATTTTAACTCAAAGACCAAATTCAATAAACAATTCAAAATTAAGACAGCCCATGCCTCGTCAAGCCATTCATACCAGATCACAATTAAAGAACTAATGACTATGCTACCTTTGCACGGTCAAAATACCGCGGCCCTTCAACA-TCAAAGTCAGCGGGCAGGCCATACTTCAAAAACTAATACTATGTTACGACTTATCTCATTAACAAATAAAACGAGAGCGACGGGCGATGTGTACATACCTCAGAACCAATTATCATAAAAACAATCTTCAAAATATTACAATCAAATCCAATTTCATGCCAGTAATTAAAACCAACAATCCAAAACCACCAAATAACAATGTAACCCACCAA-TACACTTAGAGA-AAGCTGCACCTTGACCTGAAATCAAACCAAATAGAGGAACAAGAAAATTATATAACCCTAAAAAGATAATCAATAAACGGCGGTATACAAACCAATAAAACAACTAAGTAAGGTCCAACGTGGACTATCGATAACGAGACAGGTTCCTCTGAACGGAATAAGATACCGCCAAATTCTTTAAGTTTCAAGAACATAACTAGTACTACTCAGGC-AAAACATTAACATCCAAAAATAATAGGGTATCTAATCCTAGTTT
		Reticulitermes_virginicus          ATGACAACATGATTAAACATAAGACTACAAGACGGAGCATCTCCCATCATAGAACAACTAATCTTCTTCCACGACCATACATTAATAATTATACTAATAATCATCACAACCGTAATGTACATAATAACCGCCCTACCTTGAAACAAACACACTAGACGATTTATATTAGAAGGACAACTAATCGAAACCACATGAACAATTGCACCAGCAATCATCCTAGTATTCATCGCGATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACTCTAAAAGCAGTAGGACACCAGTGATACTGAAGATATGAATATTCAGACTTCACAAAATTAGAATTTGACTCTTACATAATTCCACAAGAGGAAAATCAAGCAAGAACCTTCCGACTATTAGACACAGACAACCGAATTGTACTACCCATAAACTCACCAATCCGATTAGTAGTAACAGCAGCAGACGTACTACACTCATGAACAATTCCAAGACTAGGAGTGAAAACAGACGCCACACCAGGACGATTAAATCAAACAAGATTCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGTGGAGCAAATCATAGATTTATGCCTATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGTCTAAGAGAACTTAATCCAACATCGAGGTCGCAAACCCCCCTGCCGATAAGAACTCTCAAGGGAGATAACGCTGTTATCCCTAAGGTAATTTAATCTTACAATCAAAATAAATGGATCAAACAAATATAAATAAATATAACAACACAAAGGAGGGGTTAAATTATATCCCTCCCATCACCCCAACAAAACATATTAAACGGCCC-AGTGAACCCTCACAAACAGAAAGTAGACCATAA---TAAATGTCAAACTCTATAGGGTCTTCTCGTCCCATAAAAACATCTAAGAATTTTAACTCAAAGACCAAATTCAATAAACAATTCAAAATTAAGACAGCCCATGCCTCGTCAAGCCATTCATACCAGATCACAATTAAAGAACTAATGACTATGCTACCTTTGCACGGTCAAAATACCGCGGCCCTTCAACA-CTAAAGTCAGCGGGCAGGCCATACTTCAAAAACTAATACTATGTTACGACTTATCTCATTAACAAGTAAAACGAGAGCGACGGGCGATGTGTACATACCTCAGAACCAATTATCACAAAAACAATCTTCAAAATATTACAATCAAATCCAATTTCATGCCAGTAATTAAAACCAACAATCC-AAACCAACAAATAACAATGTAACCCACCAA-TACACTTAGAGA-AAGCTGCACCTTGACCTGAAATTAAACCAAATAAAGGAACAAGAAAATTGTATAACCCTAAAAAGATAATCAATAAACGGCGGTATACAAACCAATTAAACAACTAAGTAAGGTCCAACGTGGACTATCGATAACGAGACAGGTTCCTCTGAACGGAATAAGATACCGCCAAATTCTTTAAGTTTCAAGAACATAACTAATACTACTCAGGC-AAAACATTAACATCCAAAAATAATAGGGTATCTAATCCTAGTTT
		Coptotermes_formosanus             ATGACAACATGATTAAACATAAGACTACAAGATGGAGCATCCCCCATTATAGAACAATTAGTCTTCTTCCACGACCATGTTCTAATAATTATACTAATAATCACCACAACCGTATCATACATAATGGTCACCTTAATCCGAAATAAACAAACCAGACGATTCATACTAGAAGGACAAATGATTGAAACCACATGAACCATTGCACCAGCAATCATCCTTGTGTTTATCGCCATACCATCACTACGACTCCTATACCTAATAGATGAAGTTCACAACCCAACACTAACACTAAAAGCAGTCGGACACCAATGATACTGAAGATATGAATATTCAGACTTTACAAAATTAGAATTCGACTCATACATAATCCCCCAAGAAGAACAACAAGAAAGAACATTCCGACTACTAGACACGGACAACCGAATCGTCCTACCAATCAATTCACCAATTCGACTAATCGTTACAGCAGCAGACGTCCTACACTCATGAACAATTCCAAGACTAGGGGTAAAAACAGACGCCACACCAGGACGACTAAATCAAACAAGATTCTCAATCAGTCGTCCTGGTATCCTATATGGACAATGCTCAGAGATTTGCGGAGCAAACCACAGATTCATACCCATCACAATTGAAAGAGTACCAGCAAAATACTTTATTAACTGAGTTTCAAAACTAAGAGAACTTAATCCAACATCGAGGTCGCAAACCTCCCTGCCGATAAGAACTCTCAAGGAAGATAACGCTGTTATCCCTAAGGTAATTTAATCTTATAATCAAAATAAATGGATCAAATAAATATAAATCAATATAACCAAAATCAAGAGGAGTT-AATTATATTCCTCCCATCACCCCAACAAAACAAAAAGTCCACTCACCAATAAAACAAACAAACAACAAACAAACAAATAAACCAAATGTTAAACTCTATAGGGTCTTCTCGTCCCACAAAAACATCTAAGAATTTTAACTCAAAAACCAAATTCAATAAAACATTCAACATTAAGACAGCTTGTGCCTCGTCAAGCCATTCATTCCAGATCACAATTAAAGAACTAATGATTATGCTACCTTTGCACGGTCAAAATACCGCGGCCCTTCAACACTCAA-GTCAGCGGGCAGGCCATACTTCAAAAACTAATACTATGTTACGACTTATCTCATTAACAA--CAAACGAGAGCGACGGGCGATGTGTACATATCTTAGAACCCA-TATCACGAAAACAATCTACAAGACATTACAATCAAATCCAATTTCATACTAATAA-TCCAACCAATAATCCAAA--CAACAAAGAACAATGTAATCCATCAATAACACTTAGAAACAAGCTGCACCTTGACCTGAAATAAATCAAAATAAAGAAACCAGAAAATTAATAAACCCTAAAAGCATAATCAATAAACGGCGGTATACAAACCA---TAGCAACTAAGTAAGGTCCAACGCGGACTATCGATAACGAGACAGATTCCTCTGAACGGAATAAGATACCGCCAAATTCTTTAAGTTTCAAGAACATACCTAATACTACTCAAGCAAAAAAATTAACATTCTAAAATAATAGGGTATCTAATCCTAGTTT
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 1590 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;