NEXUS
[File created by TreeBASE:  7/26/07  21:04:27]
[Matrix accession#: M1787]

BEGIN TAXA;
	TITLE M1787;
	DIMENSIONS  NTAX=192;
	TAXLABELS
		'Tomato big bug mycoplasma-like organism L33760'	Sweet_potato_little_leaf_phytoplasma_strain_V4_AJ289193	'Sweet potato witches-broom mycoplasma-like organism L33770'	Stylosanthes_little_leaf_phytoplasma_AJ289192	Strawberry_lethal_yellows_phytoplasma_AJ243045	Strawberry_green_petal_phytoplasma_AJ243044	Rubus_stunt_phytoplasma_Y16395	Peach_yellow_leafroll_phytoplasma_Y16394	Phytoplasma_sp_strain_LDG_Y13912	'Peanut witches-broom mycoplasma-like organism L33765'	Phytoplasma_sp_U89378	Phytoplasma_sp_strain_StLL_Y17055	Phytoplasma_sp_PinP_AJ310849	Phormium_yellow_leaf_phytoplasma_rrnB_U43570	Phormium_yellow_leaf_phytoplasma_rrnA_U43569	Pigeon_pea_little_leaf_phytoplasma_AJ289191	'Pigeon pea witches-broom mycoplasma-like organism L33735'	Phytoplasma_sp_Tomato_Big_Bud_Australia_Y08173	Picris_echiodes_phyllody_phytoplasma_Y16393	Pear_decline_phytoplasma_Y16392	'Caribbean PPWB mycoplasma-like organism U18763'	Yucatan_coconut_lethal_decline_phytoplasma_U18753	'Mycoplasma-like organism substrain ULW X68376'	'Mycoplasma-like organism substrain PPER X68374'	'Mycoplasma-like organism substrain AT X68375'	'Mycoplasma-like organism substrain ASHY X68339'	'Mycoplasma-like organism substrain ACLR X68338'	'Mycoplasma-like organism substrain AAY X68373'	'Mycoplasma-like organism Italian clover phyllody X77482'	'Mycoplasma-like organism plum leptonecrosis X77372'	'Mycoplasma-like sp. M86340'	'Loofah witches-broom mycoplasma-like organism L33764'	Knautia_arvensis_phyllody_phytoplasma_23S_Y18052	'Italian alfalfa witches-broom phytoplasma Y16390'	Group_II_phytoplasma_D12580	'Elm yellows mycoplasma-like organism rDNA L33763'	Picris_echioides_yellows_phytoplasma_Y16389	'Clover yellow edge mycoplasma-like organism L33766'	'Clover phyllody mycoplasma-like organism L33762'	Bindweed_yellows_phytoplasma_Y16391	Alder_yellows_phytoplasma_Y16387	'Aster yellows mycoplasma-like organism L33767'	'Ash yellows mycoplasma-like organism L33759'	Mulberry_dwarf_phytoplasma_AY075038	'Ziziphus jujube witches-broom phytoplasma AY072722'	European_stone_fruit_yellows_phytoplasma_AY029540	Alder_yellows_phytoplasma_AY028789	Bermuda_grass_white_leaf_phytoplasma_AJ550986	Bermuda_grass_white_leaf_phytoplasma_AJ550985	Candidatus_Phytoplasma_phoenicium_AF515637	Sorghum_grassy_shoot_phytoplasma_variant_II_AF509325	Sorghum_grassy_shoot_phytoplasma_variant_I_AF509324	Cynodon_white_leaf_phytoplasma_AF509321	Aster_yellows_phytoplasma_B_AF503568	Chinaberry_yellows_phytoplasma_strain_CbY1_AF495882	Chinaberry_yellows_phytoplasma_AF495657	'Almond witches-broom phytoplasma strain AlmWB-N1 AF455041'	'Almond witches-broom phytoplasma strain AlmWB-P1 AF455040'	'Almond witches-broom phytoplasma strain AlmWB4 AF455039'	'Almond witches-broom phytoplasma strain AlmWB3 AF455038'	Phytoplasma_sp_PY1_AF453328	Texas_Phoenix_palm_phytoplasma_AF434989	'Clover proliferation phytoplasma strain EY-IL 1 AF409070'	'Clover proliferation phytoplasma strain EY-IL 2 AF409069'	'Almond witches- broom phytoplasma strain AlmWB2 AF390137'	'Almond witches- broom phytoplasma strain AlmWB1 AF390136'	Cirsium_white_leaf_phytoplasma_rrnB_AF373106	Cirsium_white_leaf_phytoplasma_rrnA_AF373105	Delion_virescence_phytoplasma_rrnB_AF370120	Delion_virescence_phytoplasma_rrnA_AF370119	Florida_Panus_decline_phytoplasma_AF361020	Florida_Rhynchosia_little_leaf_phytoplasma_AF361019	Ethiopian_Gliricidia_little_leaf_phytoplasma_AF361018	Honduran_Gliricidia_little_leaf_phytoplasma_AF361017	'Cactus phytoplasma Martinez-Soriano 2001 AF356846'	'Loofah witches-broom phytoplasma str. LfWB clone1 rrnB AF353090'	Rehmannia_glutinosa_var_purpurea_phytoplasma_AF335107	'Cactus witches-broom phytoplasma AF331973'	Aster_yellows_phytoplasma_strain_AY1_clone_10_AF322645	Aster_yellows_phytoplasma_strain_AY1_clone_14_A_AF322644	'Phytoplasma sp pathovar mosaic-inducing AF320575'	'Ziziphus jujube witches-broom phytoplasma AF305240'	Virginia_creeper_phytoplasma_AF305198	'Black raspberry witches-broom phytoplasma clone BRWB7 AF302841'	Carrot_proliferation_phytoplasma_AF291682	'Paulownia witches-broom phytoplasma AF279271'	Strawberry_leafy_fruit_phytoplasma_AF274876	Aster_yellows_phytoplasma_B_isolate_99UW108_AF268409	Aster_yellows_phytoplasma_A_isolate_99UW111_AF268408	Aster_yellows_phytoplasma_B_isolate_99UW89_AF268407	Aster_yellows_phytoplasma_A_isolate_99UW93_AF268406	Aster_yellows_phytoplasma_O_isolate_98UW166B_AF268405	Aster_yellows_phytoplasma_A_isolate_98UW166A_AF268404	Aster_yellows_phytoplasma_A_isolate_98UW159_AF268403	Bermuda_grass_white_leaf_phytoplasma_AF248961	Mexican_periwinkle_virescence_phytoplasma_AF248960	Apple_proliferation_phytoplasma_AF248958	'Pigeon pea witches-broom phytoplasma AF248957'	'Loofah witches-broom phytoplasma AF248956'	Aster_yellows_phytoplasma_AF245439	'Black locust witches-broom phytoplasma AF244363'	Carludovica_palmata_leaf_yellowing_phytoplasma_AF237615	Red_suture_phytoplasma_AF236123	Little_peach_phytoplasma_AF236122	Peach_rosette_phytoplasma_AF236121	Periwinkle_little_leaf_phytoplasma_AF228053	Brinjal_little_leaf_phytoplasma_AF228052	Clover_phyllody_phytoplasma_strain_CPh_rrnB_AF222066	Clover_phyllody_phytoplasma_strain_CPh_rrnA_AF222065	Tomato_big_bud_phytoplasma_AF222064	Aster_yellows_phytoplasma_AF222063	Potato_purple_top_phytoplasma_AF217247	'Cactus phytoplasma Martinez-Soriano 1999 AF200718'	Cirsium_yellows_phytoplasma_AF200431	Spiraea_stunt_phytoplasma_AF190228	Walnut_witches_broom_phytoplasma_rrnB_AF190227	Walnut_witches_broom_phytoplasma_rrnA_AF190226	Fragaria_multicipita_phytoplasma_rrnB_AF190225	Fragaria_multicipita_phytoplasma_rrnA_AF190224	'Poinsettia branch-inducing phytoplasma AF190223'	Clover_yellow_edge_phytoplasma_AF189288	Ash_yellows_phytoplasma_AF189215	Elm_yellows_phytoplasma_AF189214	Alfalfa_stunt_phytoplasma_AF177384	Soybean_veinal_necrosis_phytoplasma_AF177383	Clover_yellow_edge_phytoplasma_AF175304	Clover_yellow_edge_phytoplasma_AF173558	Chayote_witches_broom_phytoplasma_ChWBIII_Mor5_AF147707	Chayote_witches_broom_phytoplasma_ChWBIII_Ch10_AF147706	Phytoplasma_HD1_AF122912	Elm_yellows_phytoplasma_strain_WVEY_AF122911	Ash_yellows_phytoplasma_strain_LWB3_AF105317	Ash_yellows_phytoplasma_strain_AshY5_AF105316	Ash_yellows_phytoplasma_strain_AshY3_AF105315	Virginia_grapevine_yellows_phytoplasma_VGYIII_AF060875	'Sugarcane yellows phytoplasma type I strain ScYP I-Afr AF056095'	'Sugarcane yellows phytoplasma type I strain ScYP I-Barb AF056094'	Fragaria_multicipita_phytoplasma_AF036354	'Chinese pigeon pea witches-broom phytoplasma AF028813'	Phytoplasma_sp_Gph_AB026155	Candidatus_Phytoplasma_ziziphi_AF279272	Candidatus_Phytoplasma_brasiliense_AF147708	Candidatus_Phytoplasma_cynodontis_AJ550984	Candidatus_Phytoplasma_australiense_L76865	Candidatus_Phytoplasma_solani_AF248959	Candidatus_Phytoplasma_oryzae_D12581	Candidatus_Phytoplasma_allocasuarinii_AY135523	Candidatus_Phytoplasma_rhamni_X76431	Candidatus_Phytoplasma_spartii_X92869	Candidatus_Phytoplasma_phoenicium_AF515636	Candidatus_Phytoplasma_luffae_AF086621	Candidatus_Phytoplasma_fraxini_AF092209	Candidatus_Phytoplasma_castaneae_AB054986	Candidatus_Phytoplasma_prunorum_AJ542544	Candidatus_Phytoplasma_pyri_AJ542543	Candidatus_Phytoplasma_mali_AJ542541	Candidatus_Phytoplasma_trifolii_CPDRRE	Candidatus_Phytoplasma_ulmi_AF122910	Candidatus_Phytoplasma_vitis_AF176319	Candidatus_Phytoplasma_cocosnigeriae_Y14175	Candidatus_Phytoplasma_cocostanzaniae_X80117	Candidatus_Phytoplasma_palmae_MO18747	Candidatus_Phytoplasma_pruni_L04682	Candidatus_Phytoplasma_aurantifolia_MO15442	Candidatus_Phytoplasma_japonicum_AB010425	Candidatus_Phytoplasma_asteris_M30790	Acholeplasma_palmae	Mollicutes_sp_X83438	'Canadian peach X mycoplasma-like organism L33733'	Mollicutes_from_R.frangula_X76431	Phytoplasma_sp._X92869	Mollicutes_from_S.officinarum_X76432	Mollicutes_sp._ass._with_papaya_yellows_crinkle_disease_Y10097	Alfalfa_witches_broom_from_Oman_AF438413	Mollicutes_sp._ass._with_papaya_mosaic_disease_Y10096	Cocky_apple_witches_broom_phytoplasma_AJ295330	Group_I_phytoplasma_D12569	Bermuda_grass_white_leaf_phytoplasma_Y16388	Phytoplasma_sp._strain_GaLL_Y15865	Phytoplasma_sp._Y11933	Mollicutes_sp._from_V.faba_X83432	Mollicutes_sp._from_S.melongena_X83431	Mycoplasma_MLO_FD_transm._from_V.vinifera_to_V.faba_X76560	Mollicutes_from_C.juncea_X76433	Mollicutes_from_V.myrtillus_X76430	Mollicutes_from_C.roseus_X76429	Mollicutes_from_V.Vinifera_X76428	Mollicutes_from_C.anuum_to_C.roseus_X76427	Mollicutes_X76425	Vigna_little_leaf_phytoplasma_AJ289195	Phytoplasma_sp_STRAWB2_U96616	Phytoplasma_sp_STRAWB1_U96614
	;
END;

BEGIN CHARACTERS;
	TITLE M1787;
	DIMENSIONS NCHAR=1657;
	FORMAT DATATYPE = DNA MISSING = ? GAP = -  ;
	MATRIX
		'Tomato big bug mycoplasma-like organism L33760'                         ---------------------------------------CT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-ACCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGTAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTATT----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACATTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAACCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Sweet_potato_little_leaf_phytoplasma_strain_V4_AJ289193                  TTTGATCCTGGCTCAGGATTAACG--CT--CGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGATAAAAGGCATCTTG-TATCTTTTAAAA-GACCTAGT----AATAGGTATGCTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AATGACGAAGTACTTC-GGTATGTAAAGTTCTTTTATCGAGGAA-GAAAAGCAAATGGCG-AACC--ATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTCTAGTAAGTCAGTGGTGTAATGGCAACGCTTAACG-TTGTCCGGCTATTGAAACTG-CTAAACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTT-TTGCAAAATGATAGT--AATATCGTGGAGGTTACCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCCCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGCCTAACTCGTTTATTCGAGAGGGCGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Sweet potato witches-broom mycoplasma-like organism L33770'             -------------------------------------GCCT--AATCACTGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGATAAAAGGCATCTTG-TATCTTTTAAAA-GACCTAGTT---AATAGGTATGCTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AATGACGAAGTACTTC-GGTATGTAAAGTTCTTTTATCGAGGAA-GAAAAGCAAATGGCG-AACC--ATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTCTAGTAAGTCAGTGATAAAA--ACGACGCTTAACG-TTGTCCGGCTATTGAAACTG-CTAAACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTT-CT-GGGTCCTAACT--GAC--GCTGAGGCACGAAA-----GGGGAGC-AAACAGG--------------------------------------A-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTT-TTGCAAAATGATAGT--AATATCGTGGAGGTTACCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGCAGCTGAAACG-CAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCCCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGCCTAACTCGTTTATTCGAGAGGGCGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Stylosanthes_little_leaf_phytoplasma_AJ289192                            TTAGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGAAAACCCCTCAAAA----------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGAATAACAAAT-GGAAACAT-TTGCTAAGACTGGA-TAGGAAACAAAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTTTA--ACAAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTTTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACTTA-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATA-TTGACGCTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGTTAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTTTTGTTATAGAAACTG-GCTAGCTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG-ATAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTTA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTCGCTGAAACG-TGAGT-TTTTGGCTA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ACAATACCCGAAAGCAGTGACTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Strawberry_lethal_yellows_phytoplasma_AJ243045                           ----------------------------------GT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCCAT--------TAACCTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGT-CTGCTAAGACTGGA-TAGGAGATAAGAAGGCATCTTT-TTATCTTTAAAA-GACCTCGC----AAGAGGTATGCTTAGGGA-AGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAAAAGATGGTGG---AAAA--ACCATT-ATGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTTAACG-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCCTAAACGATGA-GTACTAAACATTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTTT-GCAAAGCGGTAGA--AATATCGTGGAGGTTATCAGAAGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTGTTGTTAA-TTGCCAT-CAT-TAA--GTTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGCAGCTAAAGCG-TAAGC-TTTTGGCGA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAGCCGTCTAAGGTAGGGTTGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCC-TACCGGAAGGTGGGGAT
		Strawberry_green_petal_phytoplasma_AJ243044                              -------------------------GCTGGCGCGGT-GCCT--AATACATGCAAGTCGGACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGACTTGCTAAGACTGGA-TAGGAGATAAGAAGGCATCTTT-TTATCTTTAAAA-GACCTCGC----AAGAGGTATGCTTAGGGA-AGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAAAAGATGGTGG---AAAA--ACCATT-ATGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTTAACG-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCCTAAACGATGA-GTACTAAACATTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTT-TTGCAAAGCGGTAGA--AATATCGTGGAGGTTATCAGAAGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTGTTGTTAA-TTGCCAT-CAT-TAA--GTTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGCAGCTAAAGCG-TAAGC-TTTTGGCGA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAGCCGTCTAAGGTAGGGTTGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCC-TACCGGAAGGTGGGGAT
		Rubus_stunt_phytoplasma_Y16395                                           -------------------------------------------------------------GGAGATCCTTCAAAA----------GGTCTTAGT-GGCGAACGGGTGAGTAACACACGTAAGTAACCT-ACCTTTAAGACGAGGATAACAATC-GGAAACGG-TTGCTAAGACTGGA-TAGGAAACAAAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GAGGCTTGCGCCAC-ATTAGTTAGTTGGT-GAGGTAAAGGCTTACCAAGATTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTACA-TACCC-TGGTAC-TCCACGCTGTAAACGATGA-GTACTAAGTGTCGGG---GTAACCTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-CTGTCGCTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAA-ATTGGAGGAAGG-TGGGGATAACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAGGTAGTCTCAGTACGGATTGAAGTCTG-CAACTCGACTTCATGAA-GCTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGTGGCTTAACTTTGCAAG--AAGAGGGAGCTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCTTACCGGAAGGTGAGGAT
		Peach_yellow_leafroll_phytoplasma_Y16394                                 -TTGATCCTGG-TCAGGATGAACG--CWGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACTTTTA---------------GTTTCAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTCAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGAATAGGAAGTTTTCAGGCATCTTG-AAACTTTTAAAA-GACCCGC------AAGGGTATGCTGAGAGA-TGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AAGGTAACGGCTTACCAAGACCATGATGTGTAGCTGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGATACGGCCCAAACTCATACGG-AGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTA-GGTATGTAAAGTTCTTTTATTAAAGAA-GAAAAAATGATGG---AAAA--ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCTGCGGTAATAC--ATGGGGGG-CAAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATGGTCTAAGTTCAACGCTTAACG-TTGTGATGCTATAGAAACTG-TTTGACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----GATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTTGGG--TTAAA--CCAGTGCT-GAAGT-TAACGCATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGTAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATCGCTAG-TTACCAT-CATTTAG---TTGGGCACTTT-AGT-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-TGAGT-TTTTAGCAA-ATCTCATTAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTCGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-TGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCATGAAAGTTG--ACAATACCCGAAACCAGTAGCCTAACTTGCAAAA----GAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Phytoplasma_sp_strain_LDG_Y13912                                         TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTTCGG------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGAATAACAATT-GGAAACAG-TTGCTAAGGCTGGA-TAGGAAATAATGAGGCATCTCG-TTATTTTTAAAA-GACCTTCGC--AAGAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTTGTTGGT-AAGGTAACGGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTAAAGAA-GAAACGCTAGTGG---AAAA--ACTAGT-TTGACGTTATTTAATG-AATAAGCCCCGGCAAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAGTAAGTCTCTAGTTTAAATTCAACGCTTAACG-TTGTCCTGCTAGAGAAACTA-CTAGACTAGAGTAGGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGGGTTTCC--TCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ATCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTATTCT-GCGAAGCTATAGA--AATATAGTGGAGGTTATCAGAATAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTTA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATGAAAAAATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGCAGCTGAAACG-TGAGT-TGTTAGCTA-ATCTCAAAAAAATAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCATGAAAGTTG--ACAATACCCAAAACCAGTCGCTTAACTACTTCGGT--AGAGGGAGCTGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Peanut witches-broom mycoplasma-like organism L33765'                   -------------------------------------GCCT--AATCACTGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGATAAAAGGCATCTTG-TATCTTTTAAAA-GACCTAGTT---AATAGGTATGCTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AATGACGAAGTACTTC-GGTATGTAAAGTTCTTTTATCGAGGAA-GAAAAGCAAATGGCG-AACC--ATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTCTAGTAAGTCAGTGGTGTAATGGCAACGCTTAACG-TTGTCCGGCTATTGAAACTG-CTAAACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAGGTCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTTTT-GCAAAATGATAGT--AATATCGTGGAGGTTACCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCCCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGCCTAACTCGTTTATTCGAGAGGGCGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Phytoplasma_sp_U89378                                                    ----------------------------------------T--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Phytoplasma_sp_strain_StLL_Y17055                                        -------------------------------------------------------TCGAACGAAAACCCCTCAAAA----------GCTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGAATAACAAAT-GGAAACAT-TTGCTAAGACTGGA-TAGGAAACAAAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTTTA--ACAAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACTTA-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATA-TTGACGCTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGTTAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTTTTGTTATAGAAACTG-GCTAGCTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG-ATAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTTA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTCGCTGAAACG-TGAGT-TTTTGGCTA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ACAATACCCGAAAGCAGTGACTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTTGGGGA
		Phytoplasma_sp_PinP_AJ310849                                             TTTGATCCTGGCTCAGGATGAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAATCTTTCGG------------GATTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATAAAAAGGCATCTTT-TTATTTTTAAAA-GACCTTTTT--CGAAAGGTATGCTTAAAGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAAAAGCCTACCAAGACGATGATATGTAGCTGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCCACGGGAGGCA-GCA-GTAGGGGATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGTCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGCTATTCAATG-AATAAGCCCTGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAAGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGTTAAGTCTTTAGTTTAATCTCAGTGCTTAACG-CTGTTCTGCTAGAGAAACTG-ACTTACTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGTCAGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG----GAAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAACTTAAAAGGAATTGACGGG-ATCCCGCACAAGCCGGTGGATC-ATGTTGTTTAATTCGAAGAATACACCGAAAAACCTTACCA-GGTCTTGAC-ATACT-CTGCAAAGGCTGTAGA--AATACAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAGAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTTA-TGGTGGGCACTTT-AAC-GA-GACTGCCAATGAAAT-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAACG-TGAGT-TTTTGGCCA-ATCTCAAAAAAACAGCCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCAAATC-AGCATGTTG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTCG--GCAGTACCCGAAACCGGTAGCCTAACTGCATTAGC--AGAGGGATCCGTCTAAGGTAAGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Phormium_yellow_leaf_phytoplasma_rrnB_U43570                             TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGATAAGAAGGCATCTTT-TTATCTTTAAAA-GACCTCGC----AAGAGGTATGCTTAGGGA-AGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCAGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAAAAGATGGTGG---AAAA--ACCATT-ATGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTTAACG-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCCTAAACGATGA-GTACTAAACATTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTTT-GCAAAGCGGTAGA--AATATCGTGGAGGTTATCAGAAGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTGTTGTTAA-TTGCCAT-CAT-TAA--GTTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGCAGCTAAAGCG-TAAGC-TTTTGGCGA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAGCCGTCTAAGGTAGGGTTGAT------------------------AATTGGGGTTAAGTCGTAA----------------------------
		Phormium_yellow_leaf_phytoplasma_rrnA_U43569                             TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGATAAGAAGGCATCTTT-TTATCTTTAAAA-GACCTCGC----AAGAGGTATGCTTAGGGA-AGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAAAAGATGGTGG---AAAA--ACCATT-ATGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTTAACG-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCCTAAACGATGA-GTACTAAACATTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTT-TTGCAAAGCGGTAGA--AATATCGTGGAGGTTATCAGAAGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTGTTGTTAA-TTGCCAT-CAT-TAA--GTTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ACTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGCAGCTAAAGCG-TAAGC-TTTTGGCGA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTCACAAG--AAGAGGGAGCCGTCTAAGGTAGGGTTGAT------------------------AATTGGGGTTAAGTCGTAA----------------------------
		Pigeon_pea_little_leaf_phytoplasma_AJ289191                              TTTGATCCTGGCTCAGGATTAACG--CT-GCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTTG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGATATGAGGCATCTTG-TATCTTTTAAAA-GACCTAGT----AATAGGTATACTTTAGGA-CGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AATGACGAAGTACTTT-GGTATGTAAAGTTCTTTTATCAAGGAA-GAAAAGCAAGTGGCG-AACC--ATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTCTAGTAAGTCAGTGGTGTAATGGCAACGCTTAACG-TTGTCCGGCTATTGAAACTG-CTAAACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TCAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTTTT-GCGAAACGGTAGT--AATATCGTGGAGGTTATCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAGTGATAA-ACTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCTCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGTCTAACTCGTTTATTCGAGAGGGCGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Pigeon pea witches-broom mycoplasma-like organism L33735'               ---------------------------------------CT--AATACATGCAAGTCGAACGAAACCTTA----------------GG--TTAGT-GGCGAACGGGTGAGTAACAC---T--GCAGCCT-GCCTTTAAGACGTGGATAACAATT-GGAAACTG-TTGCTAAGACAGGT-TAGGAAATTAAGAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT--CGAAAGGTATACTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AAGGTAAAAGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTTGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACAATGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAAAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACATTATTCAATGGAATAAGCCCCGGCTAATTATGTGCCAC-CA-CCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAG-TTAAATGCAGTGCTTAACG-CTGTA-CGCTATAGAAACTG-TCTGACTAGAGTTAGATAGAG-CAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGCCAAACAGGATTA---------------------------------AA-G--TCGGG--TCGAC---------TCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCCGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATAATT-TTGCGACATTATAGA--AATATAATGAAGGTTATCAGAATTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCGAC-CACGTAA-TGGTGAGCACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGTAACG-TGAGT-TTATGGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTGTGATAATACCCGAAAGCGGTCGCCTAACTTCGTTAG--AAGAGGGAGCCGTCTAAGGTAGGATCGACTG----------------------AGTTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGG--
		Phytoplasma_sp_Tomato_Big_Bud_Australia_Y08173                           --------------------------CTGGCGGCGTCGCCT-AAATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGATAAAAGGCATCTTT-TATCTTTTAAAA-GACCTAGT----AATAGGTATGCTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCC-AAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAA-CTCTGA-CCGAGCAACGCCG---GTG-AATGACGAAGTACTTC-GGTATGTAAAGTTCTTTTATCAAGGAA-GAAAAGCAAATGGCG-AACC--ATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTCTAGTAAGTCAGTGGTGTAATGGCAACGCTTAACG-TTGTCCGGCTATTGAGACTG-CTAAACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAAC----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCCTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTCTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGACAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTT-TTGCAAAATGATAGT--AATATCGTGGAGGTTACCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGCGTGTTACAAAGGGTAGCTGAAACG-CAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCCCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGCCTAACTCGTTTATTCGAGAGGGCGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCC-TACCGGAAGGTGGGGAT
		Picris_echiodes_phyllody_phytoplasma_Y16393                              ------------TCAGGATGAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGAAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGATAGAAGGCATCTTT-TATCTTTTAAAA-GACCTAGT----AATAGGTATGCTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAACGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AATGATGAAGTACTTC-GGTATGTAAAATTCTTTTATCAAGGAA-GAAAAGCAAGTGGTG-AACC--ATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CGAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTATAGTAAGTCAGTGGTGTAATGGCAACGCTTAACG-TTGTCCGGCTATTGAAACTG-CTACACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTT-TTGCGAAACAGTAGT--AATATTGTGGAGGTTATCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-TAAGT-TTTTGGCCA-ATCCCCAAAAA-CAGTCCCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGCCTAACTCGGTTCTCCGAGAGGGCGTCGTCTAAGGTAGGTTGA-------------------------------------------------------------------------
		Pear_decline_phytoplasma_Y16392                                          -TTTGATCCTAGTCAGGATGAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACTTTTA---------------GTTTCAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTCAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAAGTTTTAAGGCATCTTG-AAACTTTTAAAA-GACCCGC------AAGGGTATGCTGAGAGA-TGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AAGGTAACGGCTTACCAAGACCATGATGTGTAGCTGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGATACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTA-GGTATGTAAAGTTCTTTTATTAAAGAA-GAAAAAATGATGG---AAAA--ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCTGCGGTAATAC--ATGGGGGG-CAAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATGGTCTAAGTTCAACGCTTAACG-TTGTGATGCTATAGAAACTG-TTTGACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----GATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTTGGG--TTAAA--CCAGTGCT-GAAGT-TAACGCATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATCGCTAG-TTACCAT-CATTTAG---TTGGGCACTTT-AGT-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-TGAGT-TTTTAGCAA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTCGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-TGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCATGAAAGTTG--ACAATACCCGAAACCAGTAGCCTAACTTGCAAAA----GAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Caribbean PPWB mycoplasma-like organism U18763'                         TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGGAAACCTTAG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGTGGATAACAATT-GGAAACAG-TTGCTAAGACAGGA-TAGGAAATTAAGAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT--CGAAAGGTATACTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AAGGTAAAAGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTTGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACAATGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAAAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACATTATTCAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAGTTTAAATGCAGTGCTTAACG-CTGTAGCGCTATAGAAACTG-TCTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGTTTCGAC--TCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATAATT-TTGCGACATTATAGA--AATATAATGAAGGTTATCAGAATTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCGAC-CACGTAA-TGGTGAGCACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGTAACG-TGAGT-TTATGGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ATAATACCCGAAAGCGGTCGCCTAACTTCGTTAG--AAGAGGGAGCCGTCTAAGGTAGGATCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Yucatan_coconut_lethal_decline_phytoplasma_U18753                        TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCTT--AATACATGCAAGTCGAACGGAAATCTTTTAGAGAAATCTTTTAGATTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAGAATAACAATT-GGAAACAG-TTGCTAAGGCTGGA-TAGGAAATAAAAAGGCATCTTT-TTATTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGTCAC-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGACGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAACAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTCTAGTTTAATTTCAACGCTTAACG-TTGTCCTGCTAGAGAAACTG-TTTGACTAGAGTGAGATAGAGGTAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTACT-GGGTCTTTACT--GAC--GCTGATGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACTATGA-GTACTAAGTGTCGGG-GTTAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ATCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAACTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTTCTAAAACGAG-CGCAACCC-CTGTCGTTAA-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTGGCTTAAACG-CGAGT-TTTTGGCAA-ATCTCAAAAAAATAGTCTTAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTGG--ACAATACCCGAAAGCGATAGCCTAACTGCGCAAGC--AGAGGGAATCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Mycoplasma-like organism substrain ULW X68376'                          TTTGATCCTTGGCTCAGGATTACG--CTGGC-GCGC-GCCT--AATACATGCAAGTCGAACGGAGACCCTTCAAAA----------GGTCTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTAAGACGAGGATAACAATC-GGAAACGG-TTGCTAAGACTGGA-TAGGAAACAGAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-GAGGTAAAGGCTTACCAAGATTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCTGTAAACGATGA-GTACTAAGTGTGGGG-----AAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCG-TGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTCGAGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-CTGTCGTTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGGGGATAACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAGGTAGTCTCAGTACGGATTGAAGTCTG-CAACTCGACTTCATGAA-GCTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGA-AGCAGTGGCTTAACTTGGCAAG--AGGAGGGAGCTGTCTAAGGTAGGGTTGAT-------------------------GATTGGGTTAAGTCGTAACAAGGTATCCTTACCGG--GGTGAGGAT
		'Mycoplasma-like organism substrain PPER X68374'                         TTTGATCCTGGCTCAGGATGAACG--CTGGCGGCGT-GCT---AATACATGCAAGTCGAACGGAAACTTTTA---------------GTTTCAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTCTCAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TATGAAGTTTTGAGGCATCTCG-AAACTTTTAAAA-GACCCGC------AAGGGTATGCTGAGAGA-TGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AAGGTAATGGCTTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGATACGGCCCAAACTC-TACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTA-GGTACGTAAAGTTCTTTTATTAAAGAA-GAAAAAATGATGG---AAAA--ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCTGCGGTAATAC--ATGGGGGG-CAAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTCTATGGTATAAGTTCAACGCTTAACG-TTGTGATGCTATAGAAACTG-TTTAACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTTGGG--TTAAA--CCAGTGCT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTC-GCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATCACTAG-TTACCAT-CATTTAG---TTGGGCACTTT-AGTCGA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-TGAGT-TTTTAGCAA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTCGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-TGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ACAATACCCAAAACCAGTAGCCTAACTTGCAAAA----GAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGT----------------------
		'Mycoplasma-like organism substrain AT X68375'                           TTTGATCCTGGCTCAGGATGAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACTTTTA---------------GTTTCAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTCTTAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAAGTTTTAAGGCATCTTG-AAACTTTTAAAA-GACCCGC------AAGGGTATGCTAAGAGA-TGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AAGGTAACGGCTTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACGGCCACATTGGGATTGAGATACGGCCCAAACTC-TACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAATATTTA-GGTATGTAAAGTTCTTTTATTAAAGAA-GAAAAAATGATGG---AAAA--ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCTGCGGTAATAC--ATGGGGGG-CAAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGT-GTAGGCGGTTTAATAAGTCTATGGTATAAGTTCAACGCTTAACG-TTGTGATGCTATGGAAACTG-TTTGACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTTGGG--TTAAA--CCAGTGCT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATCGCTAG-TTACCAT-CATTTAG---TTGGGCACTTT-AGTGGA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-TGAGT-TTTTAGCAA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTCGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-TGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCATGAAAGTTG--ACAATACTCGAAACCAGTAGCCTAACTTGCAAAA----GAGGGAACTGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTA---------------------
		'Mycoplasma-like organism substrain ASHY X68339'                         --------------------------------GCGT-GCCT--AATACATGCAAGTCGAACGGAAACCCCTCAAAA----------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAATCT-ACCTTTAAGACGAGGATAACAACC-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATAAAAAGGCATCTTT-TTATTTTTAAAA-GACCTTTTT--CGAAAGGTATGCTTAAAGA-TGAGCTTGCGCCAC-ATTAGTTTGTTGGT-GGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACT-AGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTC-TACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGGAAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTACCTTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTGACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG-ATAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAATC-TTACCA-GGTCTTGAC-ATGCT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGACACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTAA-TGGTGGGCACTTT-AAC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-CGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGACGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATGCCCGAAAGCAGCAGCTTAACTTCGCAAG--ACGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Mycoplasma-like organism substrain ACLR X68338'                         -----------CTCAGGATTAACCGCCTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAG-AATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTC-TTATTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTC-TACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACTGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCTGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACT-CGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGTTGTAGA--AATACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAACGCGGTGGCCTAACTTCGTAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTAAC-------------------
		'Mycoplasma-like organism substrain AAY X68373'                          TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAGGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGAAGGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTAACAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACTCCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGAGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTT--AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GTAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTAACGTCCCGGGGATCCAATC--
		'Mycoplasma-like organism Italian clover phyllody X77482'                GTTTGATCTGGCTCAGGATGAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTTTACTTTTTTAAAAAGACCTTCTT---TGGAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCC--ATGGAGGAAACTCTGA-CCCAGCAACGC-G--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATCC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-CTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCACAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATC--------------------------------------------CGGGGTTTGTACACACCGCCCGTGAAAGGACGAAAGTTG--GCAATACCCCAAA-CGGTCGCCTAACTTCGTAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Mycoplasma-like organism plum leptonecrosis X77372'                     ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGGA-TATGAAGTTTTGAGGCATCTCG-AAACTTTTAAAA-GACCCGCA-------AGTAATGCTGAGAGA-TGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AAGGTAATGGCTTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGATACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTA-GGTACGTAAAGTTCTTTTATTAAAGAA-GAAAAAATGATGG---AAAA--ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCTGCGGTAATAC--ATGGGGGGGCAAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTCTATGGTATAAGTTCAACGCTTAACG-TTGTGATGCTATAGAAACTG-TTTGACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTTGGG--TTAAA--CCAGTGCT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-G-----------------TTAA-TCGA-GA-TACACGAAA--CC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTGTAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATCACTAG-TTACCAT-CATTTAG---TTGGGCACTTT-AGT-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAA-AGTAGCTGAAACG-TGAGT-TTTTAGCAA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTCGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TAGCTTCTCGGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
		'Mycoplasma-like sp. M86340'                                             TTTGATCCTGGCTCA-GGATTAAC-GCTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAA--------TTAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAGGGCATCTTC-TTGTTTTTAAAA-GACCTA--G--CAATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTAACAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGACC-GAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGGAA-AA----ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTGTTT-AGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA-ACCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GTAATACCCAAAGCCGGTGGCCTAACTTC-GCAAG-AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Loofah witches-broom mycoplasma-like organism L33764'                   ----------------------------------------CCTAATACATGCAAGTCGAACGGAAACTTTGCAAAG----------AGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAAAT-GGAAACAT-TTGCTAAGACTGGA-TAGGAAACAAGAAGGCATCTTT-TTGTTTTTAAAA-GACCTCCTA-AAAAAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTTGTTGGT-AAGGTAATGGCTTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAATGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA--GAAAAATAGTGG---AAAA--ACTATC-TTGACGCTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGTTAAGTCTATAATTTAATTTCAACGCTTAACG-TTGTTTTGTTATAGAAACTG-CCTAACTGAGGTGAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGA------------------------------------------TCTAAGTGTCAGG-GTAAAA-CTTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGTTATAGA--AATATAATGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTAA-AGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAACG-TGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCATGAAAGTGG--ACAATACCCAAAAGCAGTGGCTTAATTTCGTAAG--AAAAGGGAACTGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Knautia_arvensis_phyllody_phytoplasma_23S_Y18052                         -----------------------------------------------------AGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGTGGATAACAATT-GGAAACAG-TTGCTAAGACAGGA-TAGGAAATTAAGAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT--CGAAAGGTATACTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AAGGTAAAGGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTTGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGTCG--CGTG-AACAATGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAAAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACATTATTCAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAGTTTAAATGCAGTGCTTAACG-CTGTAGCGCTATAGAAACTG-TCTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTTCGGCTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATAATT-TTGCGACATTATAGA--AATATAATGAAGGTTATCAGAATTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCGAC-CACGTAA-TGGTGAGCACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTACAACG-TGAGT-TTTTAGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ATAATACCCGAAAGCGGTCGCCTAACTTCGTCAG--AAGAGGGAGCCGTCTAAGGTAGGATCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Italian alfalfa witches-broom phytoplasma Y16390'                       -----------------------------------------------------------------------------------TCGGGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGATAGAAGGCATCTTG-TATCTTTTAAAA-GACCTAGT----AATAGGTATGCTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AATGACGAAGTACTTC-GGTATGTAAAATTCTTTTATCAAGGAA-TAAAAGCAAATGGCG-AACC--ATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CGAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTATAGTAAGTCAGTGGTGTAATGGCAACGCTTAACG-TTGTCCGGCTACTGAAACTG-CTAAACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTTTT-GCAAAACGATAGT--AATATTGTGGAGGTTATCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-TAAGT-TTTTGGCCA-ATCCTCAAAAA-CAGTCTCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGCCTAACTCGATTATTCGAGAGGGCGTCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Group_II_phytoplasma_D12580                                              TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAAAGTGAAGGCATCTTT-ACTTTTTTAAAA-GACCTTCTT----TGAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTAGGTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGCGCTTAACCGGT-TTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGTCGTGAG-ATGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-TGAGT-TTTTAGCCA-ATCTCATAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGTGAATC-AGCATGTCA-CGGTGAA-TACGTTCTCGGGGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
		'Elm yellows mycoplasma-like organism rDNA L33763'                       ----------------------------------------T--AA-ACATGCAAGTCGAACGGAGACC----AAAA----------GGTCTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTAAGACGAGGATAACAATC-GGAAACGG-TTGCTAAGACTGGA-TAGGAAACAGAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-GAGGTAAAGGCTTACCAAGATTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGGG--AAAA--ACTATA-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA--CCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA----------------------------------------------GGG----GAAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-CTGTCGTTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGGGGATAACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAGGTAGTCTCAGTACGGATTGAAGTCTG-CAACTCGACTTCATGAA-GCTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGTGGCTTAACTTCGCAAG--AAGAGGGAGCTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCTTACCGGAAGGTGAGGAT
		Picris_echioides_yellows_phytoplasma_Y16389                              ----------------------AACGCTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGTGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATTAAGAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT--CGAAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AAGGTAAAGGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTTGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACAATGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAAAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACATTATTCAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAGTTTAAATGCAGTGCTTAACG-CTGTAGCGCTATAGAAACTG-TCTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCATGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTTCGGCTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATAATT-TTGCGACATTATAGA--AATATAATGAAGGTTATCAGAATTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCGAC-CACGTAA-TGGTGAGCACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTACAACG-TGAGT-TTTTAGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ATAATACCCGAAAGCGGTCGCCTACTTCGTCAGA---AGAGGGAGCCGTCTAAGGTAGA-----------------------------------------------------------------------------
		'Clover yellow edge mycoplasma-like organism L33766'                     -----------------------------------------CTAATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GACCTTCTT---TGGAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAAGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCTGG-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGA---------------------------------------------CTGAGTCGGG--TAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCACAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCGGTCGCCTAACTTCGTAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Clover phyllody mycoplasma-like organism L33762'                        ---------------------------------------CT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTT-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA--CCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTTAACA-TTGTGATGCTATAAAAACTG-TTTA-CTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-TCGTGGGGAGC-AAACAG---------------------------------------------TAAATGTTGCC--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGT-CTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGGTACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAACCC--CACCA-GGTCTTGAC-AT-CTTCT--CAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGAC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-TAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTGAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Bindweed_yellows_phytoplasma_Y16391                                      TTTGATCCT-GCTCAGGATTAACG--CTGGCGC-AT-GCCT--AATACATGCAAGTCGAACGGAAGCCTTTG--------------GGCTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCTTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGATAGGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-AGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAAGCCTACCAAGACGATGATGTGTAGCCGGGCTGAGAGGTCGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAATGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAAAAAATGGTGG---AAAA--ATCATT-ATGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTTAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GGAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCCTAAACGATGA-GTACTAAACGTTGGT--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGCTT-TTGCAAAGCTTTAGA--AATATAGTGGAGGTTATCAGAAGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTGTTGTTAA-TTGCCAT-CAT-TAA--GTTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGAGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTAAAACG-CAAGT-TTCTGGCGA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTGTTTCGGT--AGAGGGAACCGTCTAAGGTAAGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Alder_yellows_phytoplasma_Y16387                                         ---------------------ACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGGAGACCCTTCAAAA----------GGTCTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTAAGACGAGGATAACAATC-GGAAACGG-TTGCTAAGACTGGA-TAGGAAACAGAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-GAGGTAAAGGCTTACCAAGATTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCTGTAAACGATGA-GTACTAAGTGTCGGG----GTAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-CTGTCGCTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGGGGATAACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAGGTAGTCTCAGTACGGATTGAAGTCTG-CAACTCGACTTCATGAA-GCTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGTGGCTTAACTTCGCAAG--AAGAGGGAGCTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCTTACCGGAAGGTGAGGAT
		'Aster yellows mycoplasma-like organism L33767'                          ----------------------------------------T--AATACATGCAAGCTGAACGGAAGTTTAAGCAATA--------AAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-----------------------------------TACTAAACGTTGGG---TAAAAACCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TCCCCGAAAACCC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GTAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Ash yellows mycoplasma-like organism L33759'                            --------------------------------------CCT--AATACATGCAAGTCGAACGGAAACCCCTCAAAA----------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAATCT-ACCTTTAAGACGAGGATAACAACC-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATAAAAAGGCATCTTT-TTATTTTTAAAA-GACCTTTTT--CGAAAGGTATGCTTAAAGA-TGAGCTTGCGCCAC-ATTAGTTTGTTGGT-GGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGGAAGAAGAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGGAAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTACCTTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTGACT--GAC--GCTGAGGCACGAAA-GCTTGGGG-GC-AAACAG-------------------------------------TGA-GTACTAAGTGTCGGG-ATAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAATC-TTACCA-GGTCTTGAC-ATGCT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGACACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTAA-TGGTGGGCACTTT-AAC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-CGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGCAGCTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Mulberry_dwarf_phytoplasma_AY075038                                      TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAACAAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAATATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCCGGTGGCCTAACTTCGCAAG-AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Ziziphus jujube witches-broom phytoplasma AY072722'                     TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGGAGACCCCTCAAAA----------GGTCTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTAAGACGAGGATAACAATC-GGAAACGG-TTGCTAAGACTGGA-TAGGAAATAAAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-GAGGTAAAGGCTTACCAAGATTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAGGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAA-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGC-CTTGCT-GGGTCTTTACT--GAC--ACTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCTGTAAACGATGA-GTACTAAGTGTCGGG----GCAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCGAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-CTGTCGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGGGGATAACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAGACAGTCTTAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GCTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGTGGCTTAACTTCGCAAG--AAGAGGGAGCTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCTTACCGGAAGGTGAGGAT
		European_stone_fruit_yellows_phytoplasma_AY029540                        TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCTT--AATACATGCAAGTCGAACGGAAACTTTTA---------------GTTTCAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTCTCAGGCGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TATGAAGTTTTGAGGCATCTCG-AAACTTTTAAAA-GACCCGC------AAGGGTATGCTGAGAGA-TGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AAGGTAATGGCTTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGATACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCCG-CGTG-AACGATGAAGTATTTA-GGTACGTAAAGTTCTTTTATTAAAGAA-GAAAAAATGATGG---AAAA--ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCTGCGGTAATAC--ATGGGGGG-CAAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTCTATGGTATAAGTTCAACGCTTAACG-TTGTGATGCTATAGAAACTG-TTTGACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTTGGG--TTAAA--CCAGTGCT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGCGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATCACTAG-TTACCAT-CATTTAG---TTGGGCACTTT-AGT-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAACG--TAGT--TTTAGCAA-GTCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTCGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-TGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ACAATACCCAAAACCAGTAGCCTAACTTGCAAAA----GAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Alder_yellows_phytoplasma_AY028789                                       ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGGAAACAGAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-GAGGTAAAGGCTTACCAAGATTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCTGTAAACGATGA-GTACTAAGTGTCGGG----GTAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-CTGTCGCTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGGGGATAACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAGGTAGTCTCAGTACGGATTGAAGTCTG-CAACTCGACTTCATGAA-GCTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
		Bermuda_grass_white_leaf_phytoplasma_AJ550986                            --------------------------------------------------------------------------------------GATTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATTAGAAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT--CGAAAGGTATACTT-AAAGAGGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AGGGTTAAAGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAA-GAAGAAAAAATAGTGG---AAAA--ACTATC-TTGACGATATTCAATG-AATAAGCCCCGGCAAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGGTAAGTCTATAGTTTAATTTCAGTGCTTAACA-CTGTTCTGCTATAGAAACTA-TCAGACTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGGA--AAC--TCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATA-CTCT-GCAAAGCTATAGCA-A-TATAGTGGAGGTTACCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCACTAG-TTGCCAG-CATGTTA-TGATGGGCACTTT-AGT-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTAAAACG-CGAGT-TTATAGCCA-ATCTCATAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GTAATACTCAAAAACGGTAGCCTAACTTCTTCGG--AAGAGGGAACCGTCTAAGGTAGGATCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Bermuda_grass_white_leaf_phytoplasma_AJ550985                            --------------------------------------------------------------------------------------GATTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATTAGAAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT--CGAAAGGTATACTT-AAAGAGGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AGGGTAAAAGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAAGAAGAAAAAATAGTGG---AAAA--ACTATC-TTGACGATATTCAATG-AATAAGCCCCGGCAAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGGTAAGTCTATAGTTTAATTTCAGTGCTTAACA-CTGTTCTGCTATAGAAACTA-TCAGACTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGGA--AAC--TCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGCCAAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATA-CTCT-GCAAAGCTATAGCA-A-TATAGTGGAGGTTACCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCACTAG-TTGCCAG-CATGTTA-TGATGGGCACTTT-AGT-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTAAAACG-CGAGT-TTATAGCCA-ATCTCATAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GTAATACTCAAAAACGGTAGCCTAACTTCTTCGG--AAGAGGGAACCGTCTAAGGTAGGATCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_phoenicium_AF515637                               --------------------------------------------------------------------------------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATTAAAAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT--CGGAAGGTATGCTT-AAAGAGGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AAGGTAAAGGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTTGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACAATGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAA-AAAGAAAAAATAGTGG---AAAA--ACTATC-TTGACATTATTCAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAGTTTAATTGCAGTGCTTAACG-CTGTACCGCTATAGAAACTG-TCTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCCCTGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGTTTTGGC--TCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATAATTTT-GCGACATTATAGAA-AATATAATGAAGGTTATCAGAATTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCGAC-CACATAA-TGGTGAGCACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTACAACG-TGAGT-TTTTAGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ATAATACCCAAAACCGGTCGCCTAACTTCGTCAG--AAGAGGGAGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Sorghum_grassy_shoot_phytoplasma_variant_II_AF509325                     ---------------------------------------------------------------------------------------------------------------------------TAACCT-GCCTTTAGGACGAGGATATCAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATAAAAAGGCATCTTT-TTATTTTTAAAA-GACCTTTTT--CGGAAGGTATGCTTTAAAGAGGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAA-GAAGAAAAAATAGTGG---AAAA--ACTATC-TTGACGCTATTCAATG-AATAAGCCCCGGCAAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACA-CTGTCCTGCTATAGAAACTA-TTAAACTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATA-GGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGGT--TAC--TCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATA-CTCT-GCAAAGCTATAGCA-A-TATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCACTAG-TTGCCAG-CATGTTA-TGATGGGCACTTT-AGT-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAACG-CAAGT-TCATAGCCA-ATCTCATAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GTAATACTCGAAAACGGTAGCCTAACTTCTTCGG--AAGAGGGAACCGTCTAAGGTAGGATCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Sorghum_grassy_shoot_phytoplasma_variant_I_AF509324                      --------------------------------------------------------------------------------------GATTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATAAAAAGGCATCTTT-TTATTTTTAAAA-GACCTTTTT--CGGAAGGTATGCTT-AAAGAGGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAA-GAAGAAAAAATAGTGG---AAAA--ACTATC-TTGACGCTATTCAATG-AATAAGCCCCGGCAAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACA-CTGTCCTGCTATAGAAACTA-TTAAACTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTAAT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGGT--TAC--TCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATA-CTCT-GCAAAGCTATAGCA-A-TATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCACTAG-TTGCCAG-CATGTTA-TGATGGGCACTTT-AGT-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAACG-CAAGT-TCATAGCCA-ATCTCATAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GTAATACTCGAAAACGGTAGCCTAACTTCTTCGG--AAGAGGGAACCGTCTAAGGTAGGATCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Cynodon_white_leaf_phytoplasma_AF509321                                  --------------------------------------------------------------------------------------ATTTTTAGT-GGGGAACGGGTGAGTACCAC--GTAAGTAACCT-GCCTTTAAGACGAGGATA-CAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATTAGAAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT--CGAAAGGTATACTT-AAAGAGGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AGGGTAAAAGCCTACCAAGACCATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAA-GAAGAAAAAATAGTGG---AAAA--ACTATC-TTGACGATATTCAATG-AATAAGCCCCGGCAAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGGTAAGTCCATAGTTTAATTTCAGTGCTTAACA-CTGTTCTGCTATAGAAACTA-TCAGACTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGGGCTTGCTTGGGTCTTTACTCGAAC--GCTGAGGCAGGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGGA--AAC--TCGGTACTTGAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATA-CTCT-GCAAAGCTATAGCA-A-TATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCACTAG-TTGCCAG-CATGTTA-TGATGGGCACTTT-AGT-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTAAAACG-CGAGT-TTATAGCCA-ATCTCATAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAAAGTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GTAATACTCAAAAACGGTAGCCTAACTTCTTCGG--AAGAGGGAACTGTCTAAGGTAGGATCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Aster_yellows_phytoplasma_B_AF503568                                     ---------------------------------------------------CAAGTCGAACGGAAGTTTAAGTAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAGT----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAACAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAGTGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAATTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-TAAGT-TTTTTGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAACCGGCGACCTAACTTCGCAAG--AAGATGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Chinaberry_yellows_phytoplasma_strain_CbY1_AF495882                      -------------------------------GGCGT-GCCT--AATACATGCAAGTCGAACGGAAATTTAAGCAAT--------TAAATTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGTAATCT-GCCCTTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGATAAGAAGGCATCTTC-TTATTTTTAAAA-GACCTAGC----AATAGGTATGCTTAAGGA-GGGGCTTGCGTCAC-ATTAGTTAGTTGGT-AGGGTAAAAGCCTACCAAGACGATGATGTGTAGTCGGGCTGAGAGGCTGAACGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGGGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAAAAGATGGTGG---AAAA--ACCATT-ATGACGGTACTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGGGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTTTATGGTCTAAGTGCAATGCTTAACA-TTGTGATGCTATAAAAACTG-TTTGACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----GATATGGAGGAACACCA-TAAGCGAAGGCGG-CTTGCT-GGGCCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAGACGTTGGG--TTAAA--CCAGTGTC-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAGAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGTTGTAGA--AATACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTGTTGTTAA-TTGCCAT-CA--TTA-AGTTGGGGACTTT-AGC-AA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CGAGC-TTTTGGCAA-ATCTCAAAAAAACAGTCTTAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTGAGCAATCAAGAGGGAGCCGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Chinaberry_yellows_phytoplasma_AF495657                                  -------------------------------GGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GACCTTCTT-TGA--AGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGTTAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGACTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCACAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCGGTCACCTAACTTCGCAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Almond witches-broom phytoplasma strain AlmWB-N1 AF455041'              TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATTAAAAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT-CGGA-AGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AAGGTAAAGGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTTGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACAATGAAGTACTTC-GGTATGTAAGGTTCTTTTATTGAAAAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACATTATTCAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAGTTTAATTGCAGTGCTTAACG-CTGTACCGCTATAGAAACTG-TCTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTTTGGCTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATAATT-TTGCGACATTATAGA--AATATAATGAAGGTTATCAGAATTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCGAC-CACATAA-TGGTGAGCACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TTTTACAAAGAGTAGCTACAACG-TGAGT-TTTTAGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ATAATACCCAAAACCGGTCGCCTAACTTCGTCAG--AAGAGGGAGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Almond witches-broom phytoplasma strain AlmWB-P1 AF455040'              TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATTAAAAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT-CGGA-AGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AAGGTAAAGGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCTTACGGGAGGCA-GCA-GTAAGGAATTTTTGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACAATGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAAAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACATTATTCAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAGTTTAATTGCAGTGCTTAACG-CTGTACCGCTATAGAAACTG-TCTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTTTGGCTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATAATT-TTGCGACATTATAGA--AATATAATGAAGGTTATCAGAATTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCGAC-CACATAA-TGGTGAGCACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TTTTACAAAGAGTAGCTACAACG-TGAGT-TTTTAGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ATAATACCCAAAACCGGTCGCCTAACTTCGTCAG--AAGAGGGAGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Almond witches-broom phytoplasma strain AlmWB4 AF455039'                TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATTAAAAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT-CGGA-AGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AAGGTAAAGGTTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTTGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACAATGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAAAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACATTATTCAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAGTTTAATTGCAGTGCTTAACG-CTGTACCGCTATAGAAACTG-TCTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTTTGGCTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAACC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATAATT-TTGCGACATTATAGA--AATATAATGAAGGTTATCAGAATTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCGAC-CACATAA-TGGTGAGCACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TTTTACAAAGAGTAGCTACAACG-TGAGT-TTTTAGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ATAATACCCAAAACCGGTCGCCTAACTTCGTCAG--AAGAGGGAGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Almond witches-broom phytoplasma strain AlmWB3 AF455038'                TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACGG-TTGCTAAGACTGGA-TAGGAAATTAAAAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT-CGGA-AGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AAGGTAAAGGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTTGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACAATGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAAAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACATTATTCAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAGTTTAATTGCAGTGCTTAACG-CTGTACCGCTATAGAAACTG-TCTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTTTGGCTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATAATT-TTGCGACATTATAGA--AATATAATGAAGGTTATCAGAATTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCGAC-CACATAA-TGGTGAGCACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TTTTACAAAGAGTAGCTACAACG-TGAGT-TTTTAGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ATAATACCCAAAACCGGTCGCCTAACTTCGTCAG--AAGAGGGAGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Phytoplasma_sp_PY1_AF453328                                              --------------------------------------------------------------------------------------------------------------------------------------------------------------TACGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATGGGTATGCTTAGGTA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGA-TATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGCTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGC--AAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAGTAAGTTTGTGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGCGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC--GACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGGTC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGG-ACTTT-AGC-AA-GACTGCCAGCGATGA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGTCCTGGG-CTACAAACGTGATACAATGGC-TGTTAC-AAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGACCGTCA--------------------------------------------------------------------------------------------------------------------------------------------------------
		Texas_Phoenix_palm_phytoplasma_AF434989                                  TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCTT--AATACATGCAAGTCGAACGGAAATCTTTTAGAGAAATCTTTTAGATTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAGAATAACAATT-GGAAACAG-TTGCTAAGGCTGGA-TAGGAAATAAAAAGGCATCTTT-TTATTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGTCAC-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGACGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAACAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTCTAGTTTAATTTCAACGCTTAACG-TTGTCCTGCTAGAGAAACTG-TTTGACTAGAGTGAGATAGAGGTAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTACT-GGGTCTTTACT--GAC--GCTGATGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACTATGA-GTACTAAGTGTCGGG-GTTAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ATCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAACTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTTCTAAAACGAG-CGCAACCC-CTGTCGTTAA-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTTAAACG-CGAGT-TTTTGGCAA-ATCTCAAAAAAATAGTCTTAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTGG--ACAATACCCGAAAGCGATAGCCTAACTGCGCAAGC--AGAGGGAATCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Clover proliferation phytoplasma strain EY-IL 1 AF409070'               TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGAAAACCCCTTAAAA----------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAACC-GGAAACGG-TTGCTAAGACTGGA-TAGGAAACAAAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--ACGAAGGTATGCTTAAAGA-GGGGCTTGCGTCAC-ATTAGTTAGTTGGT-AGAGTAAAAGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCG-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAGTAGTGG---AAAA--ACTATA-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGCGTCGGG-GTAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAATC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CACATAA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATTAAAC-ATTG-AGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTGACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGTAGCTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Clover proliferation phytoplasma strain EY-IL 2 AF409069'               TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGAAAACCCCTTAAAA----------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAACC-GGAAACGG-TTGCTAAGACTGGA-TAGGAAACAAAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--ACGAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AGAGTAAAAGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAGTAGTGG---AAAA--ACTATA-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG-GTAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTCTAATTCGAAGA-TACACGAAAAATC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCATGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CACATAA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTGACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTAGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGTAGCTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Almond witches- broom phytoplasma strain AlmWB2 AF390137'               TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATTAAAAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT-CGGA-AGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AAGGTAAAGGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTTGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACAATGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAAAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACATTATTCAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAGTTTAATTGCAGTGCTTAACG-CTGTACCGCTATAGAAACTG-TCTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTTTGGCTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATAATT-TTGCGACATTATAGA--AATATAATGAAGGTTATCAGAATTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCGAC-CACATAA-TGGTGAGCACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TTTTACAAAGAGTAGCTACAACG-TGAGT-TTTTAGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ATAATACCCAAAACCGGTCGCCTAACTTCGTCAG--AAGAGGGAGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Almond witches- broom phytoplasma strain AlmWB1 AF390136'               TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATTAAAAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT-CGGA-AGGTATGCTTAAAGA-AGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AAGGTAAAGGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTTGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACAATGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAAAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACATTATTCAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAGTTTAATTGCAGTGCTTAACG-CTGTACCGCTATAGAAACTG-TCTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTTTGGCTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATAATT-TTGCGACATTATAGA--AATATAATGAAGGTTATCAGAATTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCGAC-CACATAA-TGGTGAGCACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TTTTACAAAGAGTAGCTACAACG-TGAGT-TTTTAGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ATAATACCCAAAACCGGTCGCCTAACTTCGTCAG--AAGAGGGAGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Cirsium_white_leaf_phytoplasma_rrnB_AF373106                             ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-TAGGAAAAGTAAAGACATCTTT-ACTTTTTTAAAA-GACCTTCTT-TGA--AGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGTTAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGACTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGAAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCGTGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCACAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCGTGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
		Cirsium_white_leaf_phytoplasma_rrnA_AF373105                             ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GACCTTCTT-TGA--AGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCTAGCAACGCCG--CGTG-AACGATGAGGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGATTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGTTAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGACTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGAAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CACAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCACAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTTG-CGGTGAA-TACGTTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
		Delion_virescence_phytoplasma_rrnB_AF370120                              --------------------AACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAAGACGAGGATAACAATC-GGAAACAG-TTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GACCTTCTT-TGA--AGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--TGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGCGCTTAACG-CTGTTGCGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--CAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTTCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCACAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCGGTCGCCTAACTTCGTAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Delion_virescence_phytoplasma_rrnA_AF370119                              ---------------------ACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTGTC-------------GGGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAAAGCAAAGGCATCTTT-ACTTTTTTAAAA-GACCTTCTT-TGA--AGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--TGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGCGCTATAGAAACTG-TTTTACTAGAGTAAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--CAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCACAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCGGTGGCCTAACTTTGTAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Florida_Panus_decline_phytoplasma_AF361020                               TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCTT--AATACATGCAAGTCGAACGGAAATCTTTTA-------------GATTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAGAATAACAATT-GGAAACAG-TTGCTAAGGCTGGA-TAGGAAATAAAAAGGAATCTTT-TTATTTTTAAAA-GACCTTTTT--CGGAAGGTATGCTTAAAGA-GGGGCTTGCGTCAC-ATTAGTTAGTTGGT-AGGGTAAAGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGACGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAACAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTCTAGTTTAATTTCAACGCTTAACG-TTGTCCTGCTAGAGAAACTG-TTTAACTAGAGTGAGATAGAGGTAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTACT-GGGTCTTTACT--GAC--GCTGATGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACTATGA-GTACTAAGTGTCGGG-GTTAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ATCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTTCTAAAACGAG-CGCAACCC-CTGTCGTTAA-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTGAAACG-CGAGT-TTTCGGCAA-ATCTCAAAAAAATAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTGG--ACAATACCCGAAAGCGACAGCCTAACTGCGTAAGC--AGAGGGAATCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Florida_Rhynchosia_little_leaf_phytoplasma_AF361019                      TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGGAAACCTTAG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGTGGATAACAATT-GGAAACAG-TTGCTAAGACAGGA-TAGGAAATTAAGAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT--CGAAAGGTATACTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AAGGTAAAAGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTTGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACAATGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAAAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACATTATTCAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAGTTTAAATGCAGTGCTTAACG-CTGTAGCGCTATAGAAACTG-TCTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGTTTCGAC--TCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATAATT-TTGCGACATTATAGA--AATATAATGAAGGTTATCAGAATTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCGAC-CACGTAA-TGGTGAGCACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGTAACG-TGAGT-TTATGGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ATAATACCCGAAAGCGGTCGCCTAACTTCGTTAG--AAGAGGGAGCCGTCTAAGGTAGGATCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Ethiopian_Gliricidia_little_leaf_phytoplasma_AF361018                    TTTGATCGTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGAAAACCTTCGG-------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTAATGACGAGGATAACCACT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGATAGAAGGCATCTTT-TATCTTTTAAAA-GACCTAGC----AATAGGTATGCGTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGCAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACTTC-GGTATGTAAAGTTCTTTTATCAAAGAA-GAAAAGCAAATGGCG-AACC--ATTTGT-TTGCCGGTATTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTAAAGTAAGTCAGTGGTGTAATGGCAACGCTCAACG-TTGTCCGGCTATTGAAACTG-CTTTACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCATGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTT-CTTGCAAAACGATAGT--AATATCGTCGAGGTTATCAGGAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TATTGGCCA-ATCCCCAAAAA-CAGTCTCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTCCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGCCTAACTCGTTCACTCGAGAGGGCGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Honduran_Gliricidia_little_leaf_phytoplasma_AF361017                     TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGGAAACCTTAG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGTGGATAACAATT-GGAAACAG-TTGCTAAGACAGGA-TAGGAAATTAAGAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT--CGAAAGGTATACTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AAGGTAAAAGCTTACCAAGACGATGATGTGTAGCTGGTCTGAGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTTGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACAATGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAAAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACATTATTCAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGTGGTTTGATAAGTCTATAGTTTAAATGCAGTGCTTAACG-CTGTAGCGCTATAGAAACTG-TCTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGTTTTGAC--TCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATAATT-TTGCGACATTATAGA--AATATAATGAAGGTTATCAGAATTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCGAC-CACGTAA-TGGTGAGCACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGAC-TGTTACAAAGAGTAGCTGTAACG-TGAGT-TTATGGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ATAATACCCGAAAGCGGTCGCCTAACTTCGTTAG--AAGAGGGAGCCGTCTAAGGTAGGATCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Cactus phytoplasma Martinez-Soriano 2001 AF356846'                      ------------------------------------------------------------------------------------------------------------------------------------------------------------ACGACTG-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-AGGGTAAAGGCCTACCAAGACTATTATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCAACTGGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGGTGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCGTGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG---TAAA--CCAGTGTT-GAGGC-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TCACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGATGACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACACGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCAATCACTAGT------------------------------------------------------------------------------------------------------------------------------------------------------
		'Loofah witches-broom phytoplasma str. LfWB clone1 rrnB AF353090'        TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCAT-GCCT--AATACATGCAAGTCGAACGGAAACTTTGCAAAG----------AGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAAAT-GGAAACAT-TTGCTAAGACTGGA-TAGGAAACAAGAAGGCATCTTT-TTGTTTTTAAAA-GACCTCCTA-AAAAAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTTGTTGGT-AAGGTAATGGCTTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAATGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA--GAAAAATAGTGG---AAAA--ACTATC-TTGACGCTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGTTAAGTCTATAATTTAATTTCAACGCTTAACG-TTGTTTTGTTATAGAAACTG-CCTAACTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCAGG--GTAAAACTTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGTTATAGA--AATATAATGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTAA-AGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAACG-TGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCATGAAAGTGG--ACAATACCCAAAAGCAGTGGCTTAATTTCGTAAG--AAAAGGGAACTGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Rehmannia_glutinosa_var_purpurea_phytoplasma_AF335107                    ----------------------------------GT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAGGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Cactus witches-broom phytoplasma AF331973'                              -----------------------------GCGGCGT-GCCT--AATACCTGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAT--GTAAGCAACCT-ACCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGAAATAAGGCATCTTA-TTTCTTTTAAAA-GACCTAGT----AATAGGTATACTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGG-TGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTA-GGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGACGAAGTACTTT-GGTATGTAAAGTTCTTTTATCAAGGAA-GAAAAGCAAGTGGCG-AACC--ATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTCTAGTAAGTCAGTGGTGTAATGGCAACGCTCAACG-TTGTCCGGCTATTGAAACTG-CTAAACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGATTAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTT-TTGCGAAACGGTAGT--AATATCGTAGAGGTTATCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAGTGATAA-ACTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-TAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCTCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAATGGTAGCCTAACTCGTTTATTCGAGAGGGCGCTGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Aster_yellows_phytoplasma_strain_AY1_clone_10_AF322645                   TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCC-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTAATCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Aster_yellows_phytoplasma_strain_AY1_clone_14_A_AF322644                 TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAGGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTAACAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACAAACCGCCCGTCAAACCACGAAAGTTG--GTAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Phytoplasma sp pathovar mosaic-inducing AF320575'                       TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGAAATAAGGCATCTTA-TTTCTTTTAAAA-GACCTAGT----AATAGGTATACTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGTCTGAGACACGGCCCAATCTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGACGAAGTACTTT-GGTATGTAAAGTTCTTTTATCAAGGAA-GAAAAGCAAGTGGCG-AACC--ATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTCTAGTAAGTCAGTGGTGTAATGGCAACGCTCAACG-TTGTCCGGCTATTGAAACTG-CTAAACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAGCGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTTTT-GCGAAACGGTAGT--AATATCGTAGAGGTTATCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAGTGATAA-ACTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-TAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCTCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAATGGTAGCCTAACTCGTTTATTCGAGAGGGCGCTGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Ziziphus jujube witches-broom phytoplasma AF305240'                     -------------------------------------GCCT--AATACATGCAAGTCGAACGGAGACCCCTCAAAA----------GGTCTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTAAGACGAGGATAACAATC-GGAAACGG-TTGCTAAGACTGGA-TAGGAAATAAAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-GAGGTAAAGGCTTACCAAGATTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCTGTAAACGATGA-GTACTAAGTGTCGGG----GCAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCGAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-CTGTCGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGGGGATAACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATTCAATGGC-TGTTACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAGACAGTCTTAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GCTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGTGGCTTAACTTCGCAAG--AAGAGGGAGCTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCTTACCGGAAGGTGAGGAT
		Virginia_creeper_phytoplasma_AF305198                                    -------------------------------------GCCT--AATACATGCAAGTCGAACGGAGACCCTTCAAAA----------GGTCTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTAAGACGAGGATAACAATC-GGAAACGG-TTGCTAAGACTGGA-TAGGAAACAGAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-GAGGTAAAGGCTTACCAAGATTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCTGTAAACGATGA-GTACTAAGTGTCGGG---GGTAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-CTGTCGCTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGGGGATAACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAGGTAGTCTCAGTACGGATTGAAGTCTG-CAACTCGACTTTATGAA-GCTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGTGGCTTAACTTCGCAAG--AAGAGGGAGCTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCTTACCGGAAGGTGAGGAT
		'Black raspberry witches-broom phytoplasma clone BRWB7 AF302841'         TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GACCTTCTT---TGAAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGTTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGCGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AACGAA--ACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCACAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCGGTCGCCTAACTTCGTAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Carrot_proliferation_phytoplasma_AF291682                                ------------------------------------------------------------------------------------------------------------------------------------------------------------GAAACGA-CTGCTAAGACTGGA-TAGCAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTATT----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTGA--------------------------------------------------------------------------------------------------------------------------------------------------------
		'Paulownia witches-broom phytoplasma AF279271'                           TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTGATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAGTAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGT--TAAAA--CCAGTGTT-GAAGT-TAATACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAATATGAAAC-TTAAAGGAATTGATGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
		Strawberry_leafy_fruit_phytoplasma_AF274876                              --------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GACCTTCTT---TGGAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCGCGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCACAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------
		Aster_yellows_phytoplasma_B_isolate_99UW108_AF268409                     TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGG--CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Aster_yellows_phytoplasma_A_isolate_99UW111_AF268408                     TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAATCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-ACCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGTAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTATT----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGG--CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAACCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Aster_yellows_phytoplasma_B_isolate_99UW89_AF268407                      TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGG--CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GTAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Aster_yellows_phytoplasma_A_isolate_99UW93_AF268406                      TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGTAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTATT----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTATTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGG--CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAACCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Aster_yellows_phytoplasma_O_isolate_98UW166B_AF268405                    ------------------------------------------------------------------------------------------------------------------------------------------------------------GAAACGA-CTGCTAAGACTGGA-TAGTAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTATT----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGCTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TGCCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTG-TGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCGACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGG--CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACACGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTGACGGGGTTTGTACACACCGCCCGTCA--------------------------------------------------------------------------------------------------------------------------------------------------------
		Aster_yellows_phytoplasma_A_isolate_98UW166A_AF268404                    ------------------------------------------------------------------------------------------------------------------------------------------------------------GAAACGA-CTGCTAAGACTGGA-TAGTAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTATT----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGG-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTTGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGCGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTGCCAG-CACGTAA-TGGTGGGGACCTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGG--CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCGCGGGGTTTGTACACACCGCCCGTCA--------------------------------------------------------------------------------------------------------------------------------------------------------
		Aster_yellows_phytoplasma_A_isolate_98UW159_AF268403                     ------------------------------------------------------------------------------------------------------------------------------------------------------------GAAACGA-CTGCTAAGACTGGA-TAGTAGACAAGAAGGCATCTTC-TTGTTTATAAAA-GACCTATT----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGTGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTGGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGG--CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCACGGGGTTTGTACACACCGCCCGTCA--------------------------------------------------------------------------------------------------------------------------------------------------------
		Bermuda_grass_white_leaf_phytoplasma_AF248961                            TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCTT--AATACATGCAAGTCGAACGGAAATCTTCG--------------GATTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACAA-TTGCTAAGACTGGA-TAGGAAATTAGAAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT--CGAAAGGTATACTTAAAGA-GGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AGGGTAAAAGCCTACCAAGACCATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGATATTCAATG-AATAAGCCCCGGCAAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGGTAAGTCTATAGTTTAATTTCAGTGCTTAACA-CTGTTCTGCTATAGAAACTA-TCAGACTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG----GAAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGC--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCACTAG-TTGCCAG-CATGTTA-TGATGGGCACTTT-AGT-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTAAAACG-CGAGT-TTATAGCCA-ATCTCATAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GTAATACTCAAAAACGGTAGCCTAACTTCTTCGG--AAGAGGGAACTGTCTAAGGTAGGATCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Mexican_periwinkle_virescence_phytoplasma_AF248960                       TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAATTTAAGTAAT--------TAAATTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGTAATCT-GCCCTTAAGACGAGGATAACAGTT-GGAAACAA-CTGCTAAGACTGGA-TAGGAGATAAGAAGGCATCTTC-TTATTTTTAAAA-GACCTAGC----AATAGGTATGCTTAAGGA-GGGGCTTGCGTCAC-ATTAGTTAGTTGGT-AGGGTAAAAGCCTACCAAGACAATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAAGGAA-GAAAAGATGGTGG---AAAA--ACCATT-ATGACGGTACTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTTTATGGTCTAAGTGCAATGCTTAACA-TTGTGATGCTATAAAAACTG-TTTGACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-TGAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAGACGTTGGG--TTAAA--CCAGTGTC-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGTTTCT-GCAAAGCTGTAGA--AATACAGCGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTGTTGTTAA-TTGCCAT-CAT-TAA--GTTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGC-TTTTGGCAA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAGGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTGAGCAATCAAGAGGGATCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Apple_proliferation_phytoplasma_AF248958                                 TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACTTTTA---------------GTTTCAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTCTTAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAAGTTTTAAGGCATCTTG-AAACTTTTAAAA-GACCCGCAA------GGGTATGCTAAGAGA-TGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AAGGTAACGGCTTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACGGCCACATTGGGATTGAGATACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAATATTTA-GGTATGTAAAGTTCTTTTATTAAAGAA-GAAAAAATGATGG---AAAA--ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCTGCGGTAATAC--ATGGGGGG-CAAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGT-GTAGGCGGTTTAATAAGTCTATGGTATAAGTTCAACGCTTAACG-TTGTGATGCTATGGAAACTG-TTTGACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTTGGG--TTAAA--CCAGTGCT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATCGCTAG-TTACCAT-CATTTAG---TTGGGCACTTT-AGT-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-TGAGT-TTTTAGCAA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTCGGGATCGCTAGTAATCGCGAATC-AGCATGTCG-TGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCATGAAAGTTG--ACAATACTCGAAACCAGTAGCCTAACTTGTAAAA----GAGGGAACTGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Pigeon pea witches-broom phytoplasma AF248957'                          TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGGAAACCTTAG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGTGGATAACAATT-GGAAACAG-TTGCTAAGACAGGA-TAGGAAATTAAGAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT--CGAAAGGTATACTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AAGGTAAAAGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTTGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACAATGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAAAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACATTATTCAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAGTTTAAATGCAGTGCTTAACG-CTGTAGCGCTATAGAAACTG-TCTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGTTTCGAC--TCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATAATT-TTGCGACATTATAGA--AATATAATGAAGGTTATCAGAATTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCGAC-CACGTAA-TGGTGAGCACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGTAACG-TGAGT-TTATGGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ATAATACCCGAAAGCGGTCGCCTAACTTCGTTAG--AAGAGGGAGCCGTCTAAGGTAGGATCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Loofah witches-broom phytoplasma AF248956'                              TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCAT-GCCT--AATACATGCAAGTCGAACGGAAACTTTGCAAAG----------AGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAAAT-GGAAACAT-TTGCTAAGACTGGA-TAGGAAACAAGAAGGCATCTTT-TTGTTTTTAAAA-GACCTCCTA-AAAAAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTTGTTGGT-AAGGTAATGGCTTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAATGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA--GAAAAATAGTGG---AAAA--ACTATC-TTGACGCTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGTTAAGTCTATAATTTAATTTCAACGCTTAACG-TTGTTTTGTTATAGAAACTG-CCTAACTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCAGG-GTAAAA-CTTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGTTATAGA--AATATAATGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTAA-AGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAACG-TGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCATGAAAGTGG--ACAATACCCAAAAGCAGTGGCTTAATTTCGTAAG--AAAAGGGAACTGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Aster_yellows_phytoplasma_AF245439                                       ------------------------------------------------------------------------------------------------------------------------------------------------------------GAAACGA-CTGCTAAGACTGGG-TAGGAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTATAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAACCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCACGGGGTTTGTACACACCGCCCGTCA--------------------------------------------------------------------------------------------------------------------------------------------------------
		'Black locust witches-broom phytoplasma AF244363'                        TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACTTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAAGACGAGGATAACAATT-GGAAACAA-TTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GATCTTCTT---TGAAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--AAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTATGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCAAAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCGGTCACCTAACTTCGCAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Carludovica_palmata_leaf_yellowing_phytoplasma_AF237615                  TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCTT--AATACATGCAAGTCGAACGGAAATCTTTTAGAGAAATCTTTTAGATTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAGAATAACAATT-GGAAACAG-TTGCTAAGGCTGGA-TAGGAAATAAAAAGGCATCTTT-TTATTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGTCAC-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGACGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAACAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTCTAGTTTAATTTCAACGCTTAACG-TTGTCCTGCTAGAGAAACTG-TTTGACTAGAGTGAGATAGAGGTAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTACT-GGGTCTTTACT--GAC--GCTGATGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACTATGA-GTACTAAGTGTCGGG-GTTAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ATCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAACTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTTCTAAAACGAG-CGCAACCC-CTGTCGTTAA-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTTAAACG-CGAGT-TTTTGGCAA-ATCTCAAAAAAATAGTCTTAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTGG--ACAATACCCGAAAGCGATAGCCTAACTGCGCAAG--CAGAGGGAATCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Red_suture_phytoplasma_AF236123                                          ------------------------------------------------------------------------------------------------------------------------------------------------------------GAAACGA-CTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GATCTTCTT---TGAAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGT-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGATAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTACCTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGAAGA-GTACTAAGTGTCGGG--TAAAA--CTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAGACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTCATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCAAAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTGATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCA--------------------------------------------------------------------------------------------------------------------------------------------------------
		Little_peach_phytoplasma_AF236122                                        ------------------------------------------------------------------------------------------------------------------------------------------------------------GAAACGA-CTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GATCTTCTT---TGAAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGT-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAA-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAAAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACATGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTCATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGACTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCAAAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCA--------------------------------------------------------------------------------------------------------------------------------------------------------
		Peach_rosette_phytoplasma_AF236121                                       ------------------------------------------------------------------------------------------------------------------------------------------------------------GAAACGA-CTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GATCTTCTT---TGAAGGTATGCTTAAGGA-GGGGCTTGCGACGC-ATTAGTTAGTTGGT-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTAATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTCATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGCAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCAAAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCA--------------------------------------------------------------------------------------------------------------------------------------------------------
		Periwinkle_little_leaf_phytoplasma_AF228053                              ----------------------CG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGGAACCTCTTAAAAGGA------GGTTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAACC-GGAA---GGTTACTAAGACTGGA-TAGGAAACAAAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--ACGAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AGAGTAAAAGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAGTAGTGG---AAAA--ACTATA-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG-GTAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAATC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-TTGTCGTTAA-TTGCCAG-CACATAA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATCCAATGGC-TGTGACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATGCCCGAAAGCAGTAGCTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Brinjal_little_leaf_phytoplasma_AF228052                                 ---------------------------TGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGGAACCTCTTAAAAGGA------GGTTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAACC-GGAA---GGTTACTAAGACTGGA-TAGGAAACAAAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--ACGAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AGAGTAAAAGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAGTAGTGG---AAAA--ACTATA-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG-GTAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAATC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-TTGTCGTTAA-TTGCCAG-CACATAA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATCCAATGGC-TGTGACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATGCCCGAAAGCAGTAGCTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Clover_phyllody_phytoplasma_strain_CPh_rrnB_AF222066                     TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTT-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTTAACA-TTGTGATGCTATAAAAACTG-TTTAACTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAATGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-TAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Clover_phyllody_phytoplasma_strain_CPh_rrnA_AF222065                     TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTT-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCTTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTTAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAATGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-TAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Tomato_big_bud_phytoplasma_AF222064                                      TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAATCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-ACCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGTAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTATT----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGGGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAACCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Aster_yellows_phytoplasma_AF222063                                       TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAGGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTAACAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GTAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Potato_purple_top_phytoplasma_AF217247                                   ------------------------------------------------------------------------------------------------------------------------------------------------------------ACGACTG-CTGCTAAGACTGGA-TAGGGGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATTATGTGTAGCCGGGCTGAGAGGTTGAACGGACACATTGGGACTGAGGCACGACCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAGAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTAC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TATAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAA-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAGAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTGGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCATCGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGATGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TAGGTTCTCGGGGTTTGTACACACC----------------------------------------------------------------------------------------------------------------------------------------------------------------
		'Cactus phytoplasma Martinez-Soriano 1999 AF200718'                      TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACGTGCAGGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGAAATAAGGCATCTTA-TTTCTTTTAAAA-GACCTAGT----AATAGGTATACTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGACGAAGTACTTT-GGTATGTAAAGTTCTTTTATCAAGGAA-GAAAAGCAAGTGGCG-AACC--ATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTCTATTAAGTCAGTGGTGTAATGGCAACGCTCAACG-TTGTCCGGCTATTGAAACTG-CTAAACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGC-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTT-TCGCGAAACGGTAGT--AATATCGTAGAGGTTATCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAGTGATAA-ACTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-TAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCTCAGTCCGGATTGAAGTCAG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAATGGTAGCCTAACTCGTTTATTCGAGAGGGCGCTGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Cirsium_yellows_phytoplasma_AF200431                                     -----------------------------------------------------------------------------------------------------------------------------------------------------------TGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTT-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCTTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTTAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAATGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-TAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------
		Spiraea_stunt_phytoplasma_AF190228                                       TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GATCTTCTT---TGAAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCTAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGTCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCAAAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCGGTCGCCTAACTTCGCAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Walnut_witches_broom_phytoplasma_rrnB_AF190227                           TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GATCTTCTT---TGAAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCAAGAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCAAAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCGGTCACCTAACTTCGCAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Walnut_witches_broom_phytoplasma_rrnA_AF190226                           TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAAGACGAGGATAACAATT-GGAAATAG-TTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GATCTTCTT---TGAAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCAAGAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GCACTAAGTGTCGGG--TAAAA--CTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCAAAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCGGTCACCTAACTTCGCAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Fragaria_multicipita_phytoplasma_rrnB_AF190225                           TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGAAAACCCTTTAAAA---------AGGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAACT-GGAAACGG-TTGCTAAGACTGGA-TAGGAAACAAAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTTTCGAGAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AGAGTAAAAGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAGTAGTGG---AAAA--ACTATA-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG-GTAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAATC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGTTATAGA--AATATATCGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTTGTTAA-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTGACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGTAGCTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Fragaria_multicipita_phytoplasma_rrnA_AF190224                           TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCCCTTAAAA---------AGGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAACC-GGAAACGG-TTGCTAAGACTGGA-TAGGAAATAAAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTTACGAGAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AGAGTAAAAGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAGTAGTGG---AAAA--ACTATA-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG-GTAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAATC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGTTATAGA--AATATATCGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTTGTTAA-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTGACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGTAGCTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Poinsettia branch-inducing phytoplasma AF190223'                        TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGCCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAAGACGAGGATAACAATT-GGAAACAA-TCGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-GCTTTTTTAAAA-GATCTTCTT---TGAAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAATTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCAAAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATGCCCCAAAGCGGTCACCTAACTTCGCAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Clover_yellow_edge_phytoplasma_AF189288                                  ---------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GACCTTCTT---TGGAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCACAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCC-------------------------------------------------------------------------------------------------------------------------------------------------------------
		Ash_yellows_phytoplasma_AF189215                                         TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCCCTCAAAA----------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAATCT-ACCTTTAAGACGAGGATAACAACC-GGAAACAG-TTGCTAAGACTGGG-TAGGAAATAAAAAGGCATCTTT-TTATTTTTAAAA-GACCTTTTT--CGAAAGGTATGCTTAAAGA-TGAGCTTGCGCCAC-ATTAGTTTGTTGGT-GGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGGAAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTACCTTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTGACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG-ATAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAATC-TTACCA-GGTCTTGAC-ATGCT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGACACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTAA-TGGTGGGCACTTT-AAC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-CGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGCAGCTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Elm_yellows_phytoplasma_AF189214                                         TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGGAGACCCTTCAAAA----------GGTCTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTAAGACGAGGATAACAATC-GGAAACGG-TTGCTAAGACTGGA-TAGGAAACAGAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-GAGGTAAAGGCTTACCAAGATTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATA-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCTGTAAACGATGA-GTACTAAGTGTCGGG----GAAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-CTGTCGTTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGGGGATAACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAGGTAGTCTCAGTACGGATTGAAGTCTG-CAACTCGACTTCATGAA-GCTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGTGGCTTAACTTCGCAAG--AAGAGGGAGCTGTCTAAGGTAGGGTTGAT------------------------GATCGGGGTTAAGTCGTAACAAGGTATCCTTACCGGAAGGTGAGGAT
		Alfalfa_stunt_phytoplasma_AF177384                                       -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAAGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACA------------------------------------------------------------------------------------------------------------------------------------------------------------------
		Soybean_veinal_necrosis_phytoplasma_AF177383                             ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GACCTTCTT---TGGAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCACAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------
		Clover_yellow_edge_phytoplasma_AF175304                                  TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT--ACTTTTTAAAA-GACCTTCTT---TGGAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAAGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCACAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCGGTCGCCTAACTTCGTAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Clover_yellow_edge_phytoplasma_AF173558                                  TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAATACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GACCTTCTT---TGGAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCACAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCGGTCGCCTAACTTCGTAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Chayote_witches_broom_phytoplasma_ChWBIII_Mor5_AF147707                  TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAAAGTAAGGGCATCTTT-ACTTTTTTAAAA-GACCTTCTT---TGAAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGCGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGTTAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGACTTTACT--GAC--GCTGAGGCACGGAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTCTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTTCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCACAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCGGTCACCTAACTTCGCAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Chayote_witches_broom_phytoplasma_ChWBIII_Ch10_AF147706                  TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAAAGTAAGGGCATCTTT-ACTTTTTTAAAA-GACCTTCTT---TGAAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGCGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGTTAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGACTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTTCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCACAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCGGTCACCTAACTTCGCAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Phytoplasma_HD1_AF122912                                                 ------------------------------------------------------------------CCTTCAAAA-----------GGTCTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTAAGACGAGGATAACAATC-GGAAACGG-TTGCTAAGACTGGA-TAGGAAACAGAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-GAGGTAAAGGCTTACCAAGATTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGCCGTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAAGCAAGCGGAATT-CATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCATGCTGTAAACGATGA-GTACTAAGTGTCGGG---GGTAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-CTGTCGCTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGGGGATAACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAGGTAGTCTCAGTACGGATTGAAGTCTG-CAACTCGACTTCATGAA-GCTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAAATACGT-CTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGTGGCTTAACTTCGCAAG--AAGAGGGAGCTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCTTACCGGAAGGTGAGGAT
		Elm_yellows_phytoplasma_strain_WVEY_AF122911                             ----------------------------------------T--AATACATGCAAGTCGAACGGGAGACCTTCAAAA----------GGTCTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTAAGACGAGGATAACAATC-GGAAACGG-TTGCTAAGACTGGA-TAGGAAACAGAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-GAGGTAAAGGCTTACCAAGATTATGATGTGTATCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATA-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCTGTAAACGATGA-GTACTAAGTGTCGGG----GAAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-CTGTCGTTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGGGGATAACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAGGTAGTCTCAGTACGGATTGAAGTCTG-CAACTCGACTTCATGAA-GCTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGTGGCTTAACTTCGCAAG--AAGAGGGAGCTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCTTACCGGAAGGTGAGGAT
		Ash_yellows_phytoplasma_strain_LWB3_AF105317                             --------------------------------GCGT-GCCT--AATACATGCAAGTCGAACGGAAACCCCTCAAAA----------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAATCT-ACCTTTAAGACGAGGATAACAACC-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATAAAAAGGCATCTTT-TTATTTTTAAAA-GACCTTTTT--CGAAAGGTATGCTTAAAGA-TGAGCTTGCGTCAC-ATTAGTTTGTTGGT-GGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGGAAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTACCTTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTGACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATAGAA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG-ATAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAATC-TTACCA-GGTCTTGAC-ATGCT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGACACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTAA-TGGTGGGCACTTT-AAC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-CGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGCAGCTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Ash_yellows_phytoplasma_strain_AshY5_AF105316                            --------------------------------GCGT-GCCT--AATACATGCAAGTCGAACGGAAACCCCTCAAAA----------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAATCT-ACCTTTAAGACGAGGATAACAACC-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATAAAAAGGCATCTTT-TTATTTTTAAAA-GACCTTTTT--CGAAAGGTATGCTTAAAGA-TGAGCTTGCGCCAC-ATTAGTTTGTTGGT-GGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGGAAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTACCTTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTGACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG-ATAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAATC-TTACCA-GGTCTTGAC-ATGCT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGACACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTAA-TGGTGGGCACTTT-AAC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-CGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGCGGCTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Ash_yellows_phytoplasma_strain_AshY3_AF105315                            --------------------------------GCGT-GCCT--AATACATGCAAGTCGAACGGAAACCCCTCAAAA----------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAATCT-ACCTTTAAGACGAGGATAACAACC-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATAAAAAGGCATCTTT-TTATTTTTAAAA-GACCTTTTT--CGGAAGGTATGCTTAAAGA-TGAGCTTGCGCCAC-ATTAGTTTGTTGGT-GGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAATTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGGAAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTACCTTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTGACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG-ATAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAATC-TTACCA-GGTCTTGAC-ATGCT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGACACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTAA-TGGTGGGCACTTT-AAC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-CGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGCGGCTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Virginia_grapevine_yellows_phytoplasma_VGYIII_AF060875                   --------------------------------------------------------------------------------------------------------------------------------------------------------------AACGA-CTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GATCTTCTT---TGAAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCTGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCAAAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCACGGGGTTTGTACACACCGCCCGT----------------------------------------------------------------------------------------------------------------------------------------------------------
		'Sugarcane yellows phytoplasma type I strain ScYP I-Afr AF056095'        ------------------------------------------------------------CGGAAACCTTCG--------------GGTTTTAGTCGGCGAACGGGTGAGTAACAC--GTAAGCAACCTCGCCCTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GATCTTCTT---TGAAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGT-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CAAGCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGCTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CT-GCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTCATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCCAG-CATGTAACTGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGTTCATTAGCCA-ATCTCAAAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGGACACACCGCCCGTCCAACCACGAAAGTTG--GCAATACCCCTAAGCGGTCACCTAACTTCGCAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Sugarcane yellows phytoplasma type I strain ScYP I-Barb AF056094'       ------------------TTCAAC--GCTGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-CGGGAACGGGTGAGTAACAC--GTAAGCAACCTCGCCCTTAAGACGAGGATAACAATTCGGAAACAACTTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-GCTTTTTTAAAA-GATCTTCTT---TGAAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGC-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATCCTCGGCA--ATGGCGGACTCTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CAAGCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGCTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CT-GCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAATTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAACTGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGTTCATTAGCCA-ATCTCAAAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGGACACACCGCCCGTCCAACCACGAAAGTTG--GCAATGCCCCAAAGCGGTCACCTAACTTCGCAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Fragaria_multicipita_phytoplasma_AF036354                                --------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAAGACTGGA-TAGGAAATAAAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTTACGAGAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AGAGTAAAAGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAGTAGTGG---AAAA--ACTATA-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGA-GCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTTCGGGGTAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAATC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGTTATAGA--AATATATCGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTTGTTAA-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTGACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
		'Chinese pigeon pea witches-broom phytoplasma AF028813'                  TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGATAAAAGGCATCTTG-TATCTTTTAAAA-GACCTAGTT---AATAGGTATGCTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AATGACGAAGTACTTC-GGTATGTAAAGTTCTTTTATCGAGGAA-GAAAAGCAAATGGCG-AACC--ATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTCTAGTAAGTCAGTGGTGTAATGGCAACGCTTAACG-TTGTCCGGCTATTGAAACTG-CTAAACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTT-TTGCAAAATGATAGT--AATATCGTGGAGGTTACCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCCCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGCCTAACTCGTTTATTCGAGAGGGCGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Phytoplasma_sp_Gph_AB026155                                              TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTAAAGACGAGGATGACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGATAAAAGGCATCTTT-TATCTTTTAAAA-GACCTAGT----AATAGGTATGCTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AATGACGAAGTACTTC-GGTATGTAAAGTTCTTTTATCAAGGAA-GAAAAGCAAATGGCG-AACC--ATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-TTAGGCGGTCTAGTAAGTCAGTGGTGTAATGGCAACGCTTAACG-TTGTCCGGCTATTGAAACTG-CTAAACTTGAGTTAGATTGAGGC-AGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTT-TTGCAAAATGATAGT--AATATCGTGGAGGTTACCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTAAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCCCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATATCCCAAAACGGTAGCCTAACTCGTTTATTCGAGAGGGCGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_ziziphi_AF279272                                  TTTGATCCTGGCTCAGGATTAACG--CTGCGCGGCGCGCCT--AATACATGCAAGTCGAACGGAGACCCCTCAAAA----------GGTCTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTAAGACGAGGATAACAATC-GGAAACGG-TTGCTAAGACTGGA-TAGGAAATAAAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-GAGGTAAAGGCTTACCAAGATTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGGGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCTGTAAACGATGA-GTACTAAGTGTCGGG----GCAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCGAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-CTGTCGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGGGGATAACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAGACAGTCTTAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GCTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
		Candidatus_Phytoplasma_brasiliense_AF147708                              TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACTTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTAATGACGAGGATAACCATT-GGAAACAA-TGGCTAAGACTGGA-TAGGAAAAAGAAAGGCATCTTT-CTTTTTTTAAAA-GACCTAGT----AATAGGTATGCGTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AAGGTAACGGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGCAACTCTGA-CCGAGCAACGCCG--CGTG-AACGACGAAGTACTTC-GGTATGTAAAGTTCTTTTATCAAAGAA-GAAAAGCAAATGGCG-AACC--ATTTGT-CTGCCGGTATTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGCAGAGTAAGTCAGTGGTGTAATGGCAACGCTTAACG-TTGTCAGGCTATTGAAACTA-CTTTGCTAGAGTTGGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG-TCAAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTT-CTTGCGAAACGGTAGT--AATATCGTGGAGGTTATCAGGAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGCTACAAAGGGTAGCTGAAACG-CAAGT-TCTTGGCCA-ATCCCCAAAAG-CAGTCTCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGCCTAACTCGGTTTTCCGAGAGGGCGCCGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCCGGAAGGTGGGGA
		Candidatus_Phytoplasma_cynodontis_AJ550984                               --------------------------------------------------------------------------------------GATTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATTAGAAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT--CGAAAGGTATACTT-AAAGAGGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AGGGTAAAAGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAA-GAAGAAAAAATAGTGG---AAAA--ACTATC-TTGACGATATTCAATG-AATAAGCCCCGGCAAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGGTAAGTCTATAGTTTAATTTCAGTGCTTAACA-CTGTTCTGCTATAGAAACTA-TCAGACTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGGA--AAC--TCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATA-CTCT-GCAAAGCTATAGCA-A-TATAGTGGAGGTTACCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCACTAG-TTGCCAG-CATGTTA-TGATGGGCACTTT-AGT-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTAAAACG-CGAGT-TTATAGCCA-ATCTCATAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GTAATACTCAAAAACGGTAGCCTAACTTCTTCGG--AAGAGGGAACCGTCTAAGGTAGGATCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_australiense_L76865                               --------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTAAGACTGGA-TAGGAGATAAGAAGGCATCTTT-TTATCTTTAAAA-GACCTCGC----AAGAGGTATGCTTAGGGA-AGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAAAAGATGGTGG---AAAA--ACCATT-ATGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTTAACG-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAAGCGAAGGCGG-CTTGCT-AGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCCTAAACGATGA-GTACTAAACATTGGG--TAAAA--CTAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTTT-GCAAAGCGGTAGA--AATATCGTGGAGGTTATCAGAAGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTGTTGTTAA-TTGCCAT-CAT-TAA--GTTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGCAGCTAAAGCG-TAAGC-TTTTGGCGA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAGCCGTCTAAGGTAGGGTTGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_solani_AF248959                                   TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCAT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGATAAGAAGGCATCTTT-TTATTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-AGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAATGGCCTACCAAGACGATGATGTGTAGCCGGGCTGAGAGGTCGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAATGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAAAAGATGGTGG---AAAA--ACCATT-ATGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAACGCTCAACG-TTGTGATGCTATATAAACTG-TTTAGCTAGAGTTGGATAGAGGCAAGTGGAATTCCGTGTGT-AGTGGT-AAAATGCGTAAA-----TATACGGAGGAACACCA-GAAGCGAAAGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCCTAAACGATGA-GTACTAAACGTTGGA--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTT-TTGCAAAGCTGTAGA--AATACAGTGGAGGCTATCAGAAGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTGTTGTTAA-TTGCCAT-CAT-TAA--GTTGGGGACTTT-AGC-AA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAATGTGATACAATGGC-TGTTACAAAGGGTAGCTAAAGCG-TAAGC-TTCTGGCGA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTGAGCAATCAAGAAGGAGCCGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_oryzae_D12581                                     TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCTT--AATACATGCAAGTCGAACGGAAATTTTCG--------------GATTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAAACTGGA-TAGGAAATTAAAAGGTATCTTT-TAATTTTTAAAA-GACTTCTTT---CGAAGGTATACTTAAAGA-GGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGCTATTCAATG-AATAAGCCCCGGCAAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAGTTTAATTTCAGTGCTTAACA-CTGTCCTGCTATAGAAACTA-TCAGACTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG----GGAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGC--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCATTAG-TTGCCAG-CATGTTA-TGATGGGCACTTT-AAT-GA-GACTGCCAATAAAAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTAAAACG-TAAGT--TCAAGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
		Candidatus_Phytoplasma_allocasuarinii_AY135523                           ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCA--ATGGAGGAAACTCTGA-CCGAGCAACACCG--CGTG-AACGAAGAAGTATTTC-GATATGTAAAGTTCTTTTATTAAA-GAAGAAAAAATGATGG---AAAA--ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCTGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTGTGGTTTAAACTCAATGCTCAACA-TTGTGACGCTACAGAAACTG-TTTAACTAGAGTTGGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----GATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCATGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCATGCCGTAAACGATGA-GTACTAAGTGTCGGGTT--AAA--CCGGTGCT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CTG-CAAAACTATAGC--AATATAGTGGAGGCTATCAGGGATACAGGTGGCGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTACTAG-TTACCAT-CATTTAG-T--TGGGGACTCT-AGT-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCCCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTA-TCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGCCTAACTCGTTTATTCGAGAGGGCGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_rhamni_X76431                                     --------------------------------------------------------------------------------------AGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTCAGACGAGGATAACGATT-GGAAACGA-TTGCTAAGACTGGA-TAGGAAATTTTAAGGCATCTTA-AAATTTTTAAAA-GACCTG------CAAAGGTATGCTG-AAAGATGGGCTTGCGGCAC-ATTAGTTTGTTGGT-AAGGTAATGGCTTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGACGAAGTATTTC-GATACGTAAAGTTCTTTTATTAAA-GAAGAAAAAATGATGG---AAAA--ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCTGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTGTGGTTTAAACTNAATGCTCAACA-TTGTGACG-TATAGAAACTG-TTTAACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----GATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCATGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCATGCCGTAAACGATGA-GTACTAAGTGTCGGGTT--AAA--CCGGTGCT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CTG-CAAAGCTATATAGCAATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATCACTAG-TTGCCAG-CATTCAG-T--TGGGGACTNT-AGT-GA-GACTGCTAATGATAA-ATTGGNGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-TGAGT-TTTTAGCAA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTN-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCATGAAAGTCG--GTAATACCCAAAACCAGCAGCCTAACTTGCAAA----AGAGGGAACTGTCTAAGGTAGGATTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_spartii_X92869                                    --------------------------------------------------------------------------------------AGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAATCT-GCCTCTCAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAAGTTTTAAGGCATCTTG-AAACTTTTAAAA-GACCTG------AAAGGGTATGCTG-AGAGATGAGCTTGCGGCAC-ATTAGTTAGTTGGT-AAGGTAAAGGCTTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGATACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTAAA-GAAGAAAAAATGGTGG---AAAA--ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCTGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGT-GTAGGCGGTTTAATAAGTCTATGGTGTAAGTGCAACGCTCAACG-TTGTGAAGCTATAGAAACTG-TTAGACTTGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----GATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTTGGGTT--AAA--CCAGTGCT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACGCGAAAAACC-TTACCA-GGTCTTGAC-ATAAC-GTGGCAAAGCTATTGA--AAGATAGTGGAGGTTATCCGCGTTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGCTAG-TTACCAT-CATTTAG-T--TGGGCACTTT-AGT-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAACG-TGAGT-TCTTAGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTCGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-TGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ACAATACCCGAAACCAGTGGCCTAACTTGTAAA----AGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_phoenicium_AF515636                               --------------------------------------------------------------------------------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATTAAAAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT--CGGAAGGTATGCTT-AAAGAGGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AAGGTAAAGGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTTGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACAATGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAA-AAAGAAAAAATAGTGG---AAAA--ACTATC-TTGACATTATTCAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAGTTTAATTGCAGTGCTTAACG-CTGTACCGCTATAGAAACTG-TCTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGTTTTGGC--TCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATAATTTT-GCGACATTATAGAA-A-TATAATGAAGGTTATCAGAATTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCGAC-CACATAA-TGGTGAGCACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TTTTACAAAGAGTAGCTACAACG-TGAGT-TTTTAGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ATAATACCCAAAACCGGTCGCCTAACTTCGTCAG--AAGAGGGAGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_luffae_AF086621                                   TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCAT-GCCT--AATACATGCAAGTCGAACGGAAACTTTGCAAAG----------AGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAAAT-GGAAACAT-TTGCTAAGACTGGA-TAGGAAACAAGAAGGCATCTTT-TTGTTTTTAAAA-GACCTCCTA-AAAAAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTTGTTGGT-AAGGTAATGGCTTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAATGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA--GAAAAATAGTGG---AAAA--ACTATC-TTGACGCTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGTTAAGTCTATAATTTAATTTCAACGCTTAACG-TTGTTTTGTTATAGAAACTG-CCTAACTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCAGG-GTAAAA-CTTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGTTATAGA--AATATAATGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTAA-AGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAACG-TGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCATGAAAGTGG--ACAATACCCAAAAGCAGTGGCTTAATTTCGTAAG--AAAAGGGAACTGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_fraxini_AF092209                                  --------------------------------GCGT-GCCT--AATACATGCAAGTCGAACGGAAACCCCTCAAAA----------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAATCT-ACCTTTAAGACGAGGATAACAACC-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATAAAAAGGCATCTTT-TTATTTTTAAAA-GACCTTTTT--CGAAAGGTATGCTTAAAGA-TGAGCTTGCGCCAC-ATTAGTTTGTTGGT-GGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGGAAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTACCTTGACTAGAGTTAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTGACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG-ATAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAATC-TTACCA-GGTCTTGAC-ATGCT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGACACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTAA-TGGTGGGCACTTT-AAC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-CGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGCAGCTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_castaneae_AB054986                                TTTGATCCTGGCTCAGGATAAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAATCCTTCGG------------GATTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAAAATAACAATT-GGAAACAG-TTGCTAAGGTTGGA-TAGGAAATAAAGAGGCATCTTT-TTATTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGCAAC-ATTAGTTAGTTGGA-AGGGTAACGGCCTCCCAAGACGATGATGTTTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTAAA-TTGACGTTATTCAATG-AATAAGTCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGTTAAGTCTCTAGTTTAAAAACAATGCTCAACG-TTGTTCCGCTAGAGAAACTG-GCTTACTTGAGTGAGATAGGGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGTTTT----CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATAAAAC-TTAAAGGAATTGACGGG-ATCTCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT--CTGCGAAGCTCTAGA--AATAGAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTTA-TGGTGGGCACTCT-AAC-GA-GACTGCCAATGATGA-ATTGGAGGAAGA-TGAGGATCACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTGACAAAGAGTAGCTGAAACG-TGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGTGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ACCGGACCCGAAAACGGTGGCCTAACTGCTTCGGC--AGAGGGATCCGTCTAAGGTAAGGTTGGT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_prunorum_AJ542544                                 TTTGATCCTGGCTCAGGATGAACG--CTGGCGGCGT-GCTT--AATACATGCAAGTCGAACGGAAACTTTTA---------------GTTTCAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTCTCAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TATGAAGTTTTGAGGCATCTCG-AAACTTTTAAAA-GACCCGC------AAGGGTATGCTGAGAGA-TGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AAGGTAATGGCTTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGATACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTA-GGTACGTAAAGTTCTTTTATTAAAGAA-GAAAAAATGATGG---AAAA--ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCTGCGGTAATAC--ATGGGGGG-CAAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTCTATGGTATAAGTTCAACGCTTAACG-TTGTGATGCTATAGAAACTG-TTTAACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTTGGG--TTAAA--CCAGTGCT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT--CTGCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATCACTAG-TTACCAT-CATTTAG---TTGGGCACTTT-AGT-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAACG-TGAGT-TTTTAGCAA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTCGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-TGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ACAATACCCAAAACCAGTAGCCTAACTTGCAAAA----GAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_pyri_AJ542543                                     TTTGATCCTGGCTCAGGATGAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACTTTTA---------------GTTTCAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTCAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAAGTTTTAAGGCATCTTG-AAACTTTTAAAA-GACCCGC------AAGGGTATGCTGAGAGA-TGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AAGGTAACGGCTTACCAAGACCATGATGTGTAGCTGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGATACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTA-GGTATGTAAAGTTCTTTTATTAAAGAA-GAAAAAATGATGG---AAAA--ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCTGCGGTAATAC--ATGGGGGG-CAAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATGGTCTAAGTTCAACGCTTAACG-TTGTGATGCTATAGAAACTG-TTTGACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----GATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTTGGG--TTAAA--CCAGTGCT-GAAGT-TAACGCATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT--CTGCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATCGCTAG-TTACCAT-CATTTAG---TTGGGCACTTT-AGT-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-TGAGT-TTTTAGCAA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTCGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-TGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCATGAAAGTTG--ACAATACCCGAAACCAGTAGCCTAACTTGCAAAA----GAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_mali_AJ542541                                     TTTGATCCTGGCTCAGGATGAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACTTTTA---------------GTTTCAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTCTTAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAAGTTTTAAGGCATCTTG-AAACTTTTAAAA-GACCCGC------AAGGGTATGCTAAGAGA-TGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AAGGTAACGGCTTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACGGCCACATTGGGATTGAGATACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAATATTTA-GGTATGTAAAGTTCTTTTATTAAAGAA-GAAAAAATGATGG---AAAA--ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCTGCGGTAATAC--ATGGGGGG-CAAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGT-GTAGGCGGTTTAATAAGTCTATGGTATAAGTTCAACGCTTAACG-TTGTGATGCTATGGAAACTG-TTTGACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTTGGG--TTAAA--CCAGTGCT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT--CTGCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATCGCTAG-TTACCAT-CATTTAG---TTGGGCACTTT-AGT-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-TGAGT-TTTTAGCAA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTCGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-TGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCATGAAAGTTG--ACAATACTCGAAACCAGTAGCCTAACTTGTAAAA----GAGGGAACTGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_trifolii_CPDRRE                                   --------------------------------------CC---A--ACATGCGAGTCGAACGGGAACCCTTTAAAA----------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAG-AACCT-GCCTTTAAGACGAGGATAACAACC-GGAAACG---TTCTAAGACTGGA-TAGGAAACAAAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--ACGAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AGAGTAAAAGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAGTAGTGG---AAAA--ACTATA-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-CCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTA----------------------------------------------TCGGG-GTAAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAATC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGAGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATTAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTGACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGTTTGTTA--GCAATACCCAAAAGCAGTAGCTTAACTTCGCAAG--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_ulmi_AF122910                                     ----------------------------------------T--GATACATGCAAGTCGAACGGAGACCTTCAAAA-----------GGTCTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTAAGACGAGGATAACAATC-GGATACGG-TTGCTAAGACTGGA-TAGGAAACAGAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-GAGGTAAAGGCTTACCAAGATTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACGATGAATTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATA-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGTGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTA-GCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCTGTAAACGATGA-GTACTAAGTGTCGGG---GAAAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-CTGTCGTTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGGGGATAACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAGGTAGTCTCAGTACGGATTGAAGTCTG-CAACTCGACTTCATGAA-GCTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGTGGCTTAACTTCGCAAG--AAGAGGGAGCTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTTGTAACAAGGTATCCTTACCGGAAGGTGAGGAT
		Candidatus_Phytoplasma_vitis_AF176319                                    TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGGAGACCCTTCAAAA----------GGTCTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTAAGACGAGGATAACAATC-GGAAACGG-TTGCTAAGACTGGA-TAGGAAACAGAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-GAGGTAAAGGCTTACCAAGATTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCTGTAAACGATGA-GTACTAAGTGTCGGG----GTAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-CTGTCGCTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGGGGATAACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAGGTAGTCTCAGTACGGATTGAAGTCTG-CAACTCGACTTCATGAA-GCTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGTGGCTTAACTTCGCAAG--AAGAGGGAGCTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCTTACCGGAAGGTGAGGAT
		Candidatus_Phytoplasma_cocosnigeriae_Y14175                              TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTTCGG------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGAATAACAATT-GGAAACAG-TTGCTAAGGCTGGA-TAGGAAATAATGAGGCATCTCG-TTATTTTTAAAA-GACCTTCGC--AAGAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTTGTTGGT-AGGGTAACGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTAAAGAA-GAAACGCTAGTGG---AAAA--ACTAGT-TTGACGTTATTTAATG-AATAAGCCCCGGCAAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAGTAAGTCTCTAGTTTAAATTCAACGCTTAACG-TTGTCCCGCTAGAGAAACTA-CTAGACTAGAGTAAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGGGTTTCC--TCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ATCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTATCCT-GCGAAGCTATAGA--AATATAGGGGAGGTTATCAGGATAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTACCAG-CACGTTA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATGAAAAAATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGCAGCTGAAACG-TGAGT-TGTTAGCTA-ATCTCAAAAAAATAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCATGAAAGTTG--ACAATACCCAAAACCAGTCGCTTAACTACTTCGGT--AGAGGGAGCTGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_cocostanzaniae_X80117                             TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCTTTAAGACGAGAATAACAATT-GGAAACAG-TTGCTAAGGCTGGA-TAGGAAATGAAAAGGCATCTTT-TTATTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGTCAC-ATTAGTTAGTTGGT-AAGGTAAAGGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AATGATGAAGTACTTC-GGTATGTAAAATTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATA-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTCTAGTTTAATTTCAGCGCTTAACG-CTGTCCTGCTAGAGAAACTG-TCTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATGTGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG----GCAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ATCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATATT-CT-GCGAAGCTATAGA--AATATAGTAGAGGTTACCAGAAATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTTCTAAAACGAG-CGCAACCC-TTATCGTTAG-TTACCAG-CATGTTA-TGATGGGGACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAAATAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ACAATACCCAAAAACGGTAGCCTAACTACGCAAGT--AGAGGGATCCGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_palmae_MO18747                                    TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCTT--AATACATGCAAGTCGAACGGAAATCTTTTA-------------GATTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAGAATAACAATT-GGAAACAG-TTGCTAAGGCTGGA-TAGGAAATAAAAAGGCATCTTT-TTATTTTTAAAA-GACCTTTTT--CGGAAGGTATGCTTAAAGA-GGGGCTTGCGTCAC-ATTAGTTAGTTGGT-AGGGTAAAGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGACGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAACAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTCTAGTTTAATTTCAACGCTTAACG-TTGTCCTGCTAGAGAAACTG-TTTAACTAGAGTGAGATAGAGGTAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTACT-GGGTCTTTACT--GAC--GCTGATGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACTATGA-GTACTAAGTGTCGGG-GTTAAA-CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ATCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTTCTAAAACGAG-CGCAACCC-CTGTCGTTAA-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTGAAACG-CGAGT-TTTCGGCAA-ATCTCAAAAAAATAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTGG--ACAATACCCGAAAGCGACAGCCTAACTGCGTAAGC--AGAGGGAATCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_pruni_L04682                                      TTTGATCCTGGCTCAGGATGAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GATCTTCTT-TGA--AGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGT-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CTTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAAA--CTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTGC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTCATCAGGAAAACAGGTGCTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCAAAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCGGTCACCTAACTTCGCAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGTGGGGATG
		Candidatus_Phytoplasma_aurantifolia_MO15442                              -------CTGGCTCAGGATGAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGAAATAAGGCATCTTT-TTTCTTTTAAAA-GACCTAGTG----ATAGGTATACTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCGG-CGTG-AACGACGAAGTACTTT-GGTATGTAAAGTTCTTTTATCAAGGAA-GAAAAGCAAGTGGTG-AACC--ATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTCTAGTAAGTCAGTGGTGTAATGGCAACGCTCAACG-TTGTCCGGCTATTGAAACTG-CTAAACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCG-T-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTC-GCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTT-TTGCGAAACGGTAGT--AATATCGTGGAGGTTATCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAGGCGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCTCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGCCTAACTCGTTTATC-GAGAGGGCGCTGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Candidatus_Phytoplasma_japonicum_AB010425                                TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGCCTTCG--------------GGCTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-TTGCTAAGACTGGA-TAGGAGATAAGAAGGCATCTTC-TTATTTTTAAAA-GACCTAGT----AATAGGTATGCTTAGAGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAAGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTCAAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAAAAGATGGTGG---AAAA--ACCATT-ATGACGGTATCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTCTGTGGTATAAACTCAATGCTCAACA-TTGTGGCGCTACAGAAACTG-TTTAGCTAGAGTTGGATAGAGGCAAGTGGAATTTCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGAAGGAACACCA-GAAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCCTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTT-TTGCGAAGTTGTAGA--AATACAGTGGAGGTTATCAGAAGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTGTTGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTAAAGCG-CAAGC-TTCTGGCGA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTTATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
		Candidatus_Phytoplasma_asteris_M30790                                    TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAAGGAATAAATGATGG---AAAA--ATCATTGCTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGCGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATCCAGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Acholeplasma_palmae                                                      -------------------------------------------------------TCGAACGAGAGTAC--------------TTGTACTCTAGT-GGCGAACGGGTGAGTAACAC--GTAGGTAACCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGTATTTGAGGCATCTTG-AATACTTTAAAA-GACCTT--------TGGGTATGCTTAGGGA-GGGGCCTGCGGCGC-ATTAGTTAGTTGGT-GAGGTAAAGGCTTACCAAGACGATGATGCGTAGCCGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGTCA--ATGGGGGAAACCCTGA-ACGAGCAACGCCG--CGTG-AACGAAGAAGTACTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATGGCTGGTGG---AAAA--ACCAGA-ATGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTCTATAATGTCTGAGGTATAAGTGCAGTGCTCAACG-CTGTGATGCTTTAGAAACTG-ATAGGCTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGT-A-CGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTGGCGAAGGCGG-CTTGCT-GGGTCTATACT--GAC--GCTCATGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTTGGA--GAAAT--TCAGTGCT-GTAGT-TAACGCAATAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAGGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAGTCTATAGA--GATATAGAGGAGGCTAACAGATGTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGCTAG-TTACCAT-CA--TTA-AGTTGGGGACTCT-AGC-GA-GACTGCCAGTGATAA-ACTGGAGGAAGG-TGGGGATGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGAAACAAAGGGAAGCGAAAGAG-TGA-T-CTGGAGCGA-AACCCATAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCAAGTCG-CGGTGAA-TACGTTCTCGGGGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
		Mollicutes_sp_X83438                                                     -------------------------GCTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGAAAATCT--------------TCGGATTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAGAATAACAGTT-GGAAACAA-TTGCTAAGGCTGGA-TAGTAAACTAAAAGGCATCTTT-TAGTTTTTAAAA-GACCTTCTT--TG-AAGGTATGCTTAAAGA-GGGGCTTGCGGCAC-ATTAGTTAGTTGGCA-GGGTAAAGGCCTACCAAGACTATAATGTGTAGCTGGACTGAGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGNCG--CGTG-AACGATGAAGTACTTA-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGCTATTCAATG-AATAAGCCCCGGCAAACTATGTGCCAG-CAGCC-GCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAGTTTAATTTCAGTGCTTAACA-CTGTCCTGCTATAGAAACTA-TCAGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GTTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG----GGAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTC-GCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGC--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-CTATCGCTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AGT-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATCACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TTTTGGCCA-ATCCCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ATAATACCCAAAAACGGTAGCCTAACTTCTTCGG--AAGAGGGAGCCGTCTAAGGTAGGATTGATGA------------------------TTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		'Canadian peach X mycoplasma-like organism L33733'                       ---------------------------------------CT--AATACATGCAAGTCGAACGGAAACCT--------------TCGGGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GATCTTCTT--TG-AAGGTATGCTTAAGGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGTA-GGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGG---AAAA--ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CAGCC-GCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACG-CTGTTGTGCTATAGAAACTG-TTTTACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGNNNNNN-NNNNN-NNNNNN-NNNNNNNNNNNN--NATGA-GTACTAAGTNTCGGG--TAAAA--CTGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTT-CTTGCGAAGTTATAGA--AATATAATGGAGGTCATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAG-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGT-TGATACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCAAAAAATCAATCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCGGTCACCTAACTTCGCAAG--AAGAAGGATCCGTCTAAGGTAGGGTCGATAAATCCGTCTAAGGTAGGGTCGATAATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Mollicutes_from_R.frangula_X76431                                        ---------------------------------------CT--AATACATGCAAGTCGAACGAAAACTT---------------TTAGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTCAGACGAGGATAACGATT-GGAAACGA-TTGCTAAGACTGGA-TAGGAAATTTTAAGGCATCTTA-AAATTTTTAAAA-GACCTG------CAAAGGTATGCTGAAAGA-TGGGCTTGCGGCAC-ATTAGTTTGTTGGTA-AGGTAATGGCTTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGACGAAGTATTTC-GATACGTAAAGTTCTTTTATTAAAGAA-GAAAAAATGATGG---AAAA--ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CAGCT-GCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTGTGGTTTAAACTNAATGCTCAACA-TTGTGACG-TATAGAAACTG-TTTAACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----GATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCATGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCATGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTGCT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CTG-CAAAGCTATATAGCAATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATCACTAG-TTGCCAG-CATTCAG-T--TGGGGACTNT-AGT-GA-GACTGCTAATGATAA-ATTGGNGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-TGAGT-TTTTAGCAA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTN-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCATGAAAGTCG--GTAATACCCAAAACCAGCAGCCTAACTT-GCAA---AAGAGGGAACTGTCTAAGGTAGGATTGATGA------------------------TTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Phytoplasma_sp._X92869                                                   TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACTT---------------TTAGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAATCT-GCCTCTCAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAAGTTTTAAGGCATCTTG-AAACTTTTAAAA-GACCTG------AAAGGGTATGCTGAGAGA-TGAGCTTGCGGCAC-ATTAGTTAGTTGGTA-AGGTAAAGGCTTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGATACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTAAAGAA-GAAAAAATGGTGG---AAAA--ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CAGCT-GCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGT-GTAGGCGGTTTAATAAGTCTATGGTGTAAGTGCAACGCTCAACG-TTGTGAAGCTATAGAAACTG-TTAGACTTGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----GATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTTGGG--TTAAA--CCAGTGCT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACGCGAAAAACC-TTACCA-GGTCTTGAC-ATAAC-GTGGCAAAGCTATTGA--AAGATAGTGGAGGTTATCCGCGTTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGCTAG-TTACCAT-CATTTAG-T--TGGGCACTTT-AGT-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAACG-TGAGT-TCTTAGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTCGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-TGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ACAATACCCGAAACCAGTGGCCTAACTT-GTAA---AAGAGGGAACTGTCTAAGGTAGGGTTGATGA------------------------TTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Mollicutes_from_S.officinarum_X76432                                     CCCGATCCTTGCTCAGGATTAACG--CTGGCGGAGT-GCCT--AATACATGCAAGTCGAACGGAAATCT--------------TCGGATTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATAAAAAGGCATCTTT-TTATTTTTAAAA-GACCTTTTT--CGGAAGGTATGCTTAAAGA-GGGGCTTGCGTCAC-ATTAGTTAGTTGGCA-GGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGATATTCAATG-AATAAGCCCCGGCAAACTATGTGCCAG-CAGCC-GCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACA-CTGTCCTGCTATAGAAACTA-TTAGACTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG----ATTACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGC--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCATTAG-TTGCCAG-CATGTCA-TGATGGGCACTTT-AAT-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAACG-CAAGT-TTATAGCCA-ATCTCATAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GTAATACTCAAAAACGGTAGCCTAACTTCTTCGG--AAGAGGGAACCGTCTAAGGTAGGATCGATGA------------------------TTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Mollicutes_sp._ass._with_papaya_yellows_crinkle_disease_Y10097           TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCT--------------TCGGGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGATAAAAGGCATCTTT-TATCTTTTAAAA-GACCTA----GTAATAGGTATGCTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGTA-GGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AATGACGAAGTACTTC-GGTATGTAAAGTTCTTTTATCAAGGAA-GAAAAGCAAATGG---CGAACCATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CAGCC-GCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTCTAGTAAGTCAGTGGTGTAATGGCAACGCTTAACG-TTGTCCGGCTATTGAAACTG-CTAAACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTTTT-GCAAAATGATAGT--AATATCGTGGAGGTTACCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCCCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGCCTAACTCGTTTATTCGAGAGGGCGCCGTCTAAGGTAGGGTCGATGA------------------------TTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Alfalfa_witches_broom_from_Oman_AF438413                                 -------------------------------------------------------------------------------------------------------GGATGAGCAACAC--GTAAGCAACCT-ACCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGATAAAAGGCATCTTT-TATCTTTTAAAA-GACCTA----GTAATAGGTATGCTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGTA-GGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AATGACGAAGTACTTC-GGTATGTAAAGTTCTTTTATCAAGGAA-GAAAAGCAAATGG---CGAACCATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CAGCC-GCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGCCGTAAAGGGTGCCGTAGGCGGTCTAGTAAGTCAGTGGTGTAATGGCAACGCTTAACG-TTGTCCGGCTATTGAAACTG-CTAAACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGCCGG-CTCGCT-GGGTCTTAACT--GAC--GCTTAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCAC-CCGTAAACGATGA-GT-CTAAG-GTCGGGGTTAA----CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCNCAA--CGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTTTT-GCAAAATGATAGT--AATATCGTGGAGGTTACCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCCCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGCCTAACTCGTTTATTCGAGAGGGCGCCGTCTAAGGTAGGGTCGATGA------------------------TTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Mollicutes_sp._ass._with_papaya_mosaic_disease_Y10096                    --TGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAACCT--------------TCGGGTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGATAAAAGGCATCTTT-TATCTTTTAAAA-GACCTA----GTAATAGGTATGCTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGTA-GGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AATGACGAAGTACTTC-GGTATGTAAAGTTCTTTTATCAAGGAA-GAAAAGCAAATGG---CGAACCATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CAGCC-GCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTCTAGTAAGTCAGTGGTGTAATGGCAACGCTTAACG-TTGTCCGGCTATTGAAACTG-CTAAACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTTTT-GCAAAATGATAGT--AATATCGTGGAGGTTACCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCCCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGCCTAACTCGTTTATTCGAGAGGGCGCCGTCTAAGGTAGGGTCGATGA------------------------TTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Cocky_apple_witches_broom_phytoplasma_AJ295330                           -----------------------------------------------------------------------------------------------------------------------------------------------------------GGAAACAG-TGGCTAAGACTGGA-TAGGAAGATAAAAGGCATCTTG-TATCTTTTAAAA-GACCTATAG--TAATAGGTATGCTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGTAAGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AATGACGAAGTACTTC-GGTATGTAAAGTTCTTTTATCAAGGAA-GAAAAGCAAATGG---CGAACCATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CAGCCCGCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTCTAGTAAGTCAGTGGTGTAATGGCAACGCTTAACG-TTGTCCGGCTATTGAAACTG-CTAAACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCAG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTTTT-GCAAAACGGTAGT--AATATCGTGGAGGTTACCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCCCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGCCTAACTCGTTTATTCGAGAGGGCGTCGTCTAAGGTAGGGTCAATGA------------------------TTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Group_I_phytoplasma_D12569                                               TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAAT--------TAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAGCAATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAG----CAATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGTG-GGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CAGCC-GCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAGCTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GAAATACCCAAAGCCGGTGGCCTAACTTCGCAAG--AAGAGGGAACCGTCTAAGGTAGGTTCGATGA------------------------TTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Bermuda_grass_white_leaf_phytoplasma_Y16388                              -TTGATCCTGGCTCA-GGATAAAC-GCTGGCGGCGT-GCTT--AATACATGCAAGTCGAACGGAAATNTTCGGA--------------TTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATTAGAAGGCATCDDT-DAADTTTTTAAA-GACNTTTTA--CGAAAGGTATAATDAAAGA-GGGGCDTGCGGCAC-ATTAGTTAGTTGGT-AGGGTAAAAGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCGAACTCATACGGGGAGCAAGCA-AGTACGGAATTTCAGCA--ATGGAGGAAACTCTGACC-GAGCAACGCCG--CGTG-AACGATGAAGTATTTCCGGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGGAA-AA----ACTATC-TTGACGATATTCAATG-AATAAGCCCCGGCAAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGGTAAGTCTATAGTTTAATTTCAGTGCTTAACA-CTGTTCTGCTATAGAAACTATCA-GACTAGAGTGAGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--GAAA--CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACTCT--GCAAAGCTATAGC--AATATAGTGTAGGTTACCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCACTAG-TTGCCAG-CATGTTA-TGATGGGCACTTT-AGT-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTAAAACG-CGAGT-TTATAGCCA-ATCTCATAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTNAAANCACGAAAGTTG--GTAATACTNAAAAACGGTAGCCTAACTTC-TTCGG-AAGAGG-AACCGTCTAAGGTAGG-----------------------------------------------------------------------------
		Phytoplasma_sp._strain_GaLL_Y15865                                       --------------------------------------------------------------------------------------GATTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCTTTAAGACGAGAATAACAATT-GGAAACAG-TTGCTAAGGCTGGA-TAGGAAATTAAAAGGCATCTTT-TAGTTTTTAAAA-GACCTTCTT--CGGAAGGTATACTT-AAAGAGGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AGGGTAACGGCCTACCAAGACCATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAA-GAAGAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCAAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGATAAGTCTATAGTTTAATTTCAGTGCTTAACA-CTGTCCTGCTAAAGAAACTA-TCAGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGGG--AAC--TCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATA-CTCT-GCAAAGCTGTAGCA-A-TACAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTATCACTAG-TTACCAG-CATGTAA-TGATGGGGACTTT-AGTGAA--ACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTCGCTAAAACG-TAAGT-TTACAGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GTAATACCCAAAAACGGCAGCCTAACTTTTTCGA--AAGAGGGAACCGTCTAAGGTAGGATCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Phytoplasma_sp._Y11933                                                   TTTGATCCTGGCTCA-GGATGAAC-GCTGGCGGCGT-GCTT--AATACATGCAAGTCGAACGGAAACTT---------------TTAGTTTCAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTCTCAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TATGAAGTTTTGAGGCATCTCG-AAACTTTTAAAA-GACCC---G--CAA-GGGTATGCTGAGAGA-TGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AAGGTAATGGCTTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGATACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTACGGCA--ATGGAGGAAACTCTGACC-GAGCAACGCCG--CGTG-AACGATGAAGTATTAA-GGTACGTAAAGTTCTTTTATTAAAGAA-GAAAAAATGATGGAA-AA----ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCTGCGGTAATAC--ATGGGGGG-CAAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTCTATGGTATAAGTTCAACGCTTAACG-TTGTGATGCTATAGAAACTGTTT-GACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTTGGG--TTAAA--CCAGTGCT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATCACTAG-TTACCAT-CATTTAG-T--TGGGCACTTT-AGT-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAACG-TGAGT-TTTTAGCAA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTCGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-TGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--ACAATACCCAAAACCAGTAGCCTAACTT--GCAA--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Mollicutes_sp._from_V.faba_X83432                                        -----------------------------------------------CATGCAAGTCGAACGGAAACCTTCGGG--------------TTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGAAATAAGGCATCTTA-TTTCTTTTAAAA-GACCTAG-T---AATAGGTATACTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTNTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGACC-GAGCAACGCCG--CGTG-AACGACGAAGTACTTT-GGTATGTAAAGTTCTTTTATCAAGGAA-GAAAAGCAAGTGGCG-AACC--ATTTGT-TTGCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTCTAGTAAGTCAGTGGTGTAATGGCAACGCTCAACG-TTGTCCGGCTATTGAAACTGCTA-AACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GC-GTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTTTT-GCGAAACGGTAGT--AATATCGTAGAGGTTATCAGAAACACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAGTGATAA-ACTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-TAAGT-TCTTGGCCA-ATCCCCAAAAAACAGTCTCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAATGGTAGCCTAACTCGTTTATTCGAGAGGGCGCTGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Mollicutes_sp._from_S.melongena_X83431                                   TTTGATCCTGGCTCA-GGATTAAC-GCTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGGAACCTCTTAAAAG------GAGGTTTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGGATAACAACC-GGAA--GG-TTACTAAGACTGGA-TAGGAAACAAAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--ACGAAGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-AGAGTAAAAGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGACC-GAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAGTAGTGGAA-AA----ACTATA-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCTGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGN-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGTAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--GTAAAACTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCG-TGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAATC-TTACCA-GGTCTTGAC-ATACTCT--GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-TTGTCGTTAA-TTGCCAG-CACATAA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTNACAAAGAGTAGCTGAAACG-CGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-TAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATGCCCGAAAGCAGTAGCTTAACTTC-GCAAG-AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Mycoplasma_MLO_FD_transm._from_V.vinifera_to_V.faba_X76560               ------------------------------CGGCGC-GCCT--AATACATGCAAGTCGAACGGAGACCCTTTAAAAG------G----TCTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTAAGACGAGGATAACAATC-GGAAACGG-TTGCTAAGACTGGA-TAGGAAACAGAAAGGCATCTTT-TTGTTTTTAAAA-GACCTTCTT--CGGAGGGTATGCTTAAAGA-GGGGCTTGCGCCAC-ATTAGTTAGTTGGT-GAGGTAAAGGCTTACCAAGATTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTCCGGCA--ATGGAGGAAACTCTGACC-GAGCGACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGGAA-AA----ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAGATAAGTCTATAATTTAATTTCAGTGCTTAACG-CTGTCTTGTTATAGAAACTGTCTTGACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGTCAAAATGTGTAAA-----TATATGGAGGAACACCA-GAAGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCTGTAAACGATGA-GTACTAAGTGTCGGG--GTAA--CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGGATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACTCT--GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGTTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAA-CGCAACCC-CTGTCGCTAG-TTGCCAG-CACGTAA-TGGTGGGGACTTT-AGC-GA-GACTGCCAATTAAAC-ATTGGAGGAAGG-TGGGGATAACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TATTACAAAGAGTAGCTGAAACG-AGAGT-TTTTAGCCA---TTCAAAAAGGTAGTCTCAGTACGGATTGAAGTCTG-CAACTCGACTTCATGAA-GCTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTA--GCAATACCCGAAAGCAGTGGCTTAACTTC-GCAAG-AAGAGGGAGCTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCTTACCGGAAGGTGAGGAT
		Mollicutes_from_C.juncea_X76433                                          ----------------------------------GT-GCCT--AATACATGCAAGTCGAACGGAAACCTTCGGG--------------TTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-ACCCTAAAGACGAGGATAACCATT-GGAAACAG-TGGCTAAGACTGGA-TAGGAAGATAAAAGGCATCTTG-TATCTTTTAAAA-GACCTAG-T--TAATAGGTATGCTTTAGGA-GGGGCTTGCGCCAT-ATTAGTTAGTTGGT-AGGGTAATGGCCTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTAAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTAANCCGAACAACGCCG--CGTG-AATAACGAAGTACTTC-GGTATGTAAAGTTCTTTTATCGAGGAA-GAAAAGCAAATGGCG-AACC--ATTTGT-TTNCCGGTACTTGATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAAGAC--ATAAGGGG-CAAGT-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTCTAGTAAGTCAGTNGTGTAATGTCAACGCTTAACG-TTGTCCGGCTATTGAAACTGCTA-AACTTGAGTTAGATAGAGGCGAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTCGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--TTAAA--CCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCCGTGGATC-ATGTTGTTTAATTCGAAGA-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGTTTTT-CCAAAATGATAGT--AATATCGTGGAGGTTACCAGAAACAC-GGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGAAACCC-TTATCGTTAG-TTGCCAG-CACGTTA-TGGTGGGGACTTT-AAC-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCAGCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TCTTGGCCA-ATCCCCAAAAA-CAGTCCCAGTCCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAACGGTAGCCTAACTCGTTTATTCGAGAGGGCGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Mollicutes_from_V.myrtillus_X76430                                       TTTGATCCTGGCTCA-GGATTAAC-GCTGGCGGCGT-GCCT--AATACATGCAAGTNGAACGGAAACCTTCGGG--------------TTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGCAACCT-GCCCTTAAGACGAGGATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGNAAAGTAAAGGCATCTTT-ACTTTTTTAAAA-GACCTTCTT--T-GAAGGTATGCTTAAGGA-GGGGCTTGCGACACCATTAGTTAGTTGGCGAGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACANTGGGACTGAGACACGGCCCAAACTC-TACGGTAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGACC-GAGCAACGCCG--CGTG-AACGATGAAGTACCTC-GGTATGTAAAGTTCTTTTATTAAGGAA-GAAAAAAGAGTGGAA-AA----ACTCCC-TTGACGGTACTTAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGCGCTTAACG-CTGTTGTGCTATAGAAACTGTTT-TACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-NNNNNN-NNNNNNCCGTAAACGATGA-GTACTAAGTGTCGGG--TAAA--ACCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCNGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATTTTCTT-GCGAAGTTATAGA--AATATAATGGAGGTTATCAGGAAAACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTGTCGTTAA-TTGCCAG-CATGTAA-TGATGGGGACTTT-AAC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAACG-CGAGT-TCTTAGCCA-ATCTCATAAAATCAATCTCAGTTCGGATTGAACTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGTGAATC-AGCATGTCA-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCCAAAGCGGTCACCTAACTTC-GCAAG-AAGAAGGATCCGTCTAAGGTAGGGTCGAT------------------------AATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Mollicutes_from_C.roseus_X76429                                          TTTGATCCTGGCTCTTGGATTAAG-GCTGGCGGCGT-GCCT--AATACATGCAAGTCGAACGGAAATCTTCGGA--------------TTTTAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-GCCTTTAAGACGAGAATAACAATT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATTAAAAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT--CGGAAGGTATGCTTAAAGA-GGGGCTTGCGACAC-ATTAGTTAGTTGGT-AGGGTAAAGGCCTACCAAGACTATGATGTGTAGCTGGACTGAGAGGTCGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGACC-GAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGGAA-AA----ACTATC-TTGACG-TATTCAATG-AATAAGCCCCGGCAAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATAGTTTAATTTCAGTGCTTAACA-CTGTTCTGCTATAGAAACTATTA-GACTAGAGTGAGATAGAGGCAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGG-AGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGG--GGAA--CTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCG-TGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACTCT--GCAAAGCTGTAGC--AATACAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTATCGCTAG-TTGCCAG-CATGTCA-TGATGGGGACTTT-AGC-GA-GACTGCCAATGAAAA-ATTGGAGGAAGG-TGAGGATCACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTAAAACG-CAAGT-TCATAGCCA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GTAATACTCGAAAACGGTAGCCTAACTTC-TTCGG-AA-------CCGTCTAAGGTAGGATCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Mollicutes_from_V.Vinifera_X76428                                        ------------------ATTAAC-GCTGGCGGCAT--CCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAA--------TTAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAG-AATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGATAAGAAGGCATCTTT-TTATTTTTAAAA-GACCTA--G--CAATAGGTATGCTTAGGGA-AGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAATGGCCTACCAAGACGATGATGTGTAGCCGGGCTGAGAGGTCGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGACC-GAGCAATGCCG--TGTGCAACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAAAAGATGGTGGAA-AA----ACCATT-ATGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAACGCTCAACG-TTGTGATGCTATAAAAACTGTTT-AGCTAGAGTTGGATAGAGGCAAGTGGAATTCCGTGTGT-AGTGGT-AAAATGCGTAAA-----TATACGGAGGAACACCA-GAAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TNGTAG-TCCACGCCCTAAACGATGA-GTACTAAACGTTGGA--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTTT-GCAAAGCTGTAGA--AATACAGTGGAGGTTATCAGAAGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTGTTGTTAA-TTGCCAT-CATTAAG-T--TGGGGACTTT-AGC-AA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTAAAGCG-TAAGC-TTCTGGCGA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTGAGCAATCAAGAAGGAGCCGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Mollicutes_from_C.anuum_to_C.roseus_X76427                               -----------------------------GCGGCAT-GCCT--AATACATGCAAGTCGAACGGAAGTTTAAGCAA--------TTAAACTTTAGT-GGCGAACGGGTGAGTAACGC--GTAAG-AATCT-GCCCCTAAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAGATAAGAAGGCATCTTT-TTATTTTTAAAA-GACCTA--G--CAATAGGTATGCTTAGGGA-AGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAATGGCCTACCAAGACGATGATGTGTAGCCGGGCTGAGAGGTCGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGAAACTCTGACC-GAGCAATGCCG--CGTG-AACGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAAAAGATGGTGGAA-AA----ACCATT-ATGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAACG-TCAACG-TTGTGATGCTATAAAAACTGTTT-AGCTAGAGTTGGATAGAGGCAAGTNGAATTCCGTGTGT-AGTGGT-AAAATGCGTAAA-----TATACGGAGGAACACCA-GAAGCGAAGNCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGNAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCCTAAACGATGA-GTACTAAACGTTGGA--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTTT-GCAAAGCTGTAGA--AATACAGTGGAGGTTATCAGAAGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTGTTGTTAA-TTGCCAT-CATTAAG-T--TGGGGACTTT-AGC-AA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTAAAGCG-TAAGC-TTCTGGCGA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAGCCGGTGGCCTAACTTGAGCAATCAAGAAGGAGCCGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTNNCCCTACCGGAAGGTGGGGAT
		Mollicutes_X76425                                                        -------------------------GCTGC--GCGT-GCCT--AATACATGCAAGTCGAACGGAAACTT---------------TTAGTTTCAGT-GGCGAACGGGTGAGTAACAC--GTAAGTAACCT-ACCTTTCAGACGAGGATAACAGTT-GGAAACGA-CTGCTAAGACTGGA-TAGGAAGTTTTAAGGCATCTTG-AAACTTTTAAAA-GACCC---G--TAA-GG-TATGCTGAGAGA-TGGGCTTGCGGCAC-ATTAGTTAGTTGGT-AAGGTAACGGCTTACCAAGACCATGATGTGTAGCTGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGATACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTCGGCA--ATGGAGGCAACTCTGACC-GAGCAACGCCG--CGTG-AACGATGAAGTATTTA-GGTATGTAAAGTTCTTTTATTAAAGAA-GAAAAAATGATGGAA-AA----ATCATT-CTGACGGTATTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCTGCGGTAATAC--ATGGGGGG-CAAGC-GTTATCCGGATTTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTCTATGGTCTAAGTTCAACGCTTAACG-TTGTGATGCTATAGAAACTGTTT-GACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----GATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTTGGG--TTAAA--CCAGTGCT-GAAGT-TAACG-ATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCG-TGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATACT-CT-GCAAAGCTATAGA--AATATAGTGGAGGTTATCAGGGATACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATCGCTAG-TTACCAT-CATTTAG-T--TGGGCACTTT-AGT-GA-GACTGCCAATGATAA-ATTGGAGGAAGG-TGGGGATTACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGAGTAGCTGAAGCG-TGAGT-TTT-AGCAA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTCGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-TGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCATGAAAGTTG--ACAATACCCGAAACCAGTAGCCTAACTT--GTAA--AAGAGGGAACTGTCTAAGGTAGGGTTGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Vigna_little_leaf_phytoplasma_AJ289195                                   TTTGATCCTGGCTCAGGATTAACG--CTGGCGGCGC-GCCT--AATACATGCAAGTCGAACGAAAACTTTCG--------------GGTTTTAGT-GGCGAACGGGTGAGTAACGC--GTGAGTAACCT-GCCTTTAAGACGAGGATAACAACT-GGAAACAG-TTGCTAAGACTGGA-TAGGAAATTAAAAGGCATCTTT-TAATTTTTAAAA-GACCTTTTT-CGGA-AGGTATACTTAAAGA-GGGGCTTGCGTCAC-ATTAGTTAGTTGGT-AAGGTAATGGCTTACCAAGACGATGATGTGTAGCTGGACTGAGAGGTTGAACAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAAGGAATTTTTGGCA--ATGGAGGAAACTCTGA-CCGAGCGACGCCG--CGTG-AACGATGAAGTACTTC-GGTATGTAAAGTTCTTTTATTGAAGAA-GAAAAAATAGTGG---AAAA--ACTATC-TTGACGTTATTCAATG-AATAAGCCCCGGCTAATTATGTGCCAG-CA-GCCGCGGTAATAC--ATAAGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTGGTAAGTCTATAGTTTAATTTCAGCGCTTAACG-CTGTTGCGCTATAGAAACTG-CCTCACTAGAGTGAGATAGAGGTAAGCGGAATTCCATGTGT-AGCGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GAGGCGTAGGCGG-CTTACT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAGTGTCGGGTGTTAAAGCTCGGTACT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACCCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGA-TACACGAAAAACC-TTACCA-GGTCTTGAC-ATAATT-TTGCGAAGTTATAGA--AATATAACGGAGGTTATCAGAATTACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-AGGTTAAGTCCTAAAACGAG-CGCAACCC-TTATCGTTAG-TTGCGAC-CACGTAA-TGGTGAGCACTTT-AGC-GA-GACTGCCAATGACAA-ATTGGAGGAAGG-TGAGGATTACG-TCAAA-TCATCATGCCCCTTATGATCTGGG-CTACAAACGTGATACAATGAC-TGTGACAAAGAGTAGCTGAAGCG-TGAGT-TTTTAGCCA-ATCTCAAAAAAGCAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCGTCAAACCACGAAAGTTG--GCAATACCCAAAAGCGGTCGCCTAACTTCTTCGG--AAGAGGGAGCCGTCTAAGGTAGGGTCGAT------------------------GATTGGGGTTAAGTCGTAACAAGGTATCCCTACCGGAAGGTGGGGAT
		Phytoplasma_sp_STRAWB2_U96616                                            ----------------------------------------------------------------------------------------------------------------------------------------------------------------CGA-CTGCTAAGACTGGA-TAGGAGACAAGAAGGCATCTTC-TTGTTTTTAAAA-GACCTAGC----AATAGGTATGCTTAGGGA-GGAGCTTGCGTCAC-ATTAGTTAGTTGGT-GGGGTAAAGGCCTACCAAGACTATGATGTGTAGCCGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AATGATGAAGTATTTC-GGTACGTAAAGTTCTTTTATTAGGGAA-GAATAAATGATGG---AAAA--ATCATT-CTGACGGTACCTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CAAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTAAATAAGTTTATGGTCTAAGTGCAATGCTCAACA-TTGTGATGCTATAAAAACTG-TTTAGCTAGAGTAAGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-GTAGCGAAGGCGG-CTTGCT-GGGTCTTTACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAAACGTTGGG--TAAAA--CCAGTGTT-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TCACCA-GGTCTTGAC-ATGCTTCT-GCAAAACTGTAGA--AACACAGTGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTATTGTTAG-TTACCAG-CACGTAA-TGGTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACTACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAACG-CAAGT-TTTTGGCGA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTCATGAA-GTTGGAATCGCTAGTAATCGTGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCCG-----------------------------------------------------------------------------------------------------------------------------------------------------------
		Phytoplasma_sp_STRAWB1_U96614                                            ----------------------------------------------------------------------------------------------------------------------------------------------------------------CGA-CTGCTAAGACTGGA-TAGGAGACTAGAAGGCATCTTC-TTATTTTTAAAA-GACCTAGC----AATAGGTATGCTTAAGGA-GGGGCTTGCGTCAC-ATTAGTTAGTTGGT-AGGGTAAAAGCCTACCAAGACGATGATGTGTAGCCGGGCTGAGAGGTTGAACGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCA-GCA-GTAGGGAATTTTCGGCA--ATGGAGGAAACTCTGA-CCGAGCAACGCCG--CGTG-AACGATGAAGTATTTC-GGTAYGTAAAGTTCTTTTATTAAGGAA-GAAAAGATGGTGG---AAAA--ACCATT-ATGACGGTACTTAATG-AATAAGCCCCGGCTAACTATGTGCCAG-CA-GCCGCGGTAATAC--ATAGGGGG-CGAGC-GTTATCCGGAATTATTGGGC-GTAAAGGGTGC-GTAGGCGGTTTAATAAGTTTATGGTCTAAGTGCAATGCTTAACA-TTGTGATGCTATAAAAACTG-TTTTACTAGAGTTGGATAGAGGCAAGTGGAATTCCATGTGT-AGTGGT-AAAATGCGTAAA-----TATATGGAGGAACACCA-TGAGCGAAGGCGG-CTTGCT-GGGTCTTAACT--GAC--GCTGAGGCACGAAA-GCGTGGGGAGC-AAACAGGATTAGA-TACCC-TGGTAG-TCCACGCCGTAAACGATGA-GTACTAGACATTGGG--TTAAA--CCAGTGTC-GAAGT-TAACACATTAAGTACTCCG--CCTGAGTAGTAC-GTACGC-AAGTATGAAAC-TTAAAGGAATTGACGGG-ACTCCGCACAA-GCGGTGGATC-ATGTTGTTTAATTCGAAGG-TACCCGAAAAACC-TTACCA-GGTCTTGAC-ATGCTTCT-GCAAAGTTGTAGA--AATACAGCGGAGGTTATCAGTTGCACAGGTGGTGCATGGTTGTCGTC-AGCTCGTGTCGTGAGATGTT-GGGTTAAGTCCCGCAACGAG-CGCAACCC-TTGTTGTTAA-TTGCCAT-CA--TTA-AGTTGGGGACTTT-AGC-AA-GACTGCCAGTGATAA-ATTGGAGGAAGG-TGGGGACGACG-TCAAA-TCATCATGCCCCTTATGACCTGGG-CTACAAACGTGATACAATGGC-TGTTACAAAGGGTAGCTGAAGCG-CAAGC-TTTTGGCAA-ATCTCAAAAAAACAGTCTCAGTTCGGATTGAAGTCTG-CAACTCGACTTTATGAA-GTTGGAATCGCTAGTAATCGCGAATC-AGCATGTCG-CGGTGAA-TACGTTCTCGGGGTTTGTACACACCGCCC------------------------------------------------------------------------------------------------------------------------------------------------------------
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 1657 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;