#NEXUS [written Tue Jun 07 10:32:52 EDT 2011 by Mesquite version 2.73 (build 544) at ComPhy.local/10.0.1.7] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=30; TAXLABELS Phialocephala_scopiformes_AF486126 Mollisia_cineralla_AJ430228 Mollisia_fusca_AY259138 Phialocephala_urceolata_JN053273 Cadophora_hiberna_AF530462 Phaeomollisia_piceae_EU434836 Phialocephala_compacta_AF486125 Phialocephala_fortinii_AY249076 Phialocephala_glacialis_EU434843 Phialocephala_dimorphospora_AF486121 Phialocephala_repens_EU434847 Phialocephala_botulispora_AF083198 Cadophora_finlandica_AF486119 Chloridium_paucisporum_AU938675 Meliniomyces_bicolora_Y394885 Meliniomyce_svraolstadiae_AJ292199 Meliniomyces_variabilis_EF093167 Phialocephala_lagerbergii_AF083197 Mollisia_cinerella_AY259135 Mollisia_minutella_EU314681 Phialocephala_sphaeroides_AY524844 Leptodontidium_orchidicola_AF214576 Mollisia_rhizophila_JN053274 Cadophora_luteoolivacea_AY249066 Cadophora_gregata_U66731 Cadophora_fastigiata_AY249073 Cadophora_melinii_AY249072 Mollisia_dextrinospora_AY259134 Cadophora_malorum_DQ404350 Sclerotinia_sclerotium_FJ810516 ; END; BEGIN CHARACTERS; TITLE 30_Taxon_Alignment; DIMENSIONS NCHAR=1472; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Phialocephala_scopiformes_AF486126 -------------------------------------TCCGTAGGTGAACCTGCGGAAGGATCATTA--------------------------------ATAA--GGATGCT-GGAAGGGGGTGAGC-------------------------------------------------------------------------------------------TCACGCCTCCCC-TAGACGGTATA----------------------------------------------------CCCCACCC---GTGTCTA-TCTACTCTTGTTGCTTT-------GGCAGGCCG-TGGC-CT----CCACTGT-----GGGCTCT-GCCTGC--ATGTGCCTGCCAGAGGA-----TTAAACTCT-GAAT-TTT-AGT-G-ATGTCTGA--GAACTATCTAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTGTGGTATTCCGCAGGGCATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGCCTGGCTT--GGTGTTGGGGTTT-GC-GGTTC---CGCAGCCCC-------------------TAAAATCAGTGGCGGTGCCGGTGGGCT---CTACGCGTAGTA-AAT-CTCCTCGCGATTGAGTTCCCCC--GGTGGCCT----------------------------GCCAGAACCCCC--AATTTTT---ACAGGTT-GACCT-CGGATCAGGTAGGGATACCC-GCTGAACTTAAGCATATCAATAAGCGGAGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Mollisia_cineralla_AJ430228 --------------------------------------------------------------CATTA-------------------------------------------------------------------------------------------------------------------------------------------CCAGTGACACAAAC---TCATGCCGGGGGCTTCGGCCCCCGGG-CCGGTTGAA-----------------------------------TCCCACCC---GTGTCTA-CATACTCTTGTTGCTTT-------GGCAGGCCG-TGGT-CT-A--CCACTGT-----AGGCTCT-GCCTGC--ATGTGCCTGCCAGAGGA-----CCAAACTCT-GAAT-TTT-AGT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCAGATTGCGCCCTGTGGTATTCCGCAGGGCATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGCCT-GGC-TTGGTATTGGAGTTT-GC-GGTTC---CGCAGCTTC-------------------TAAAATCAGTGGCGGTGCCGGTGTGGCT--CTACGCGTAGTA-ATT-CTTCTCGCGATGGAGTTCCCT---GGTTGCCTT---------------------------GCCAGAACCCCCC-AATTTTTTT-ACAGGTT-GA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Mollisia_fusca_AY259138 ----------------------------------------------------------GGATCATTAAA-----------------------------CAT----GGACCTGGGGCT--------------GCGGCCCTGGGGAGA----------------------------------------------------------------------------------------------------------------------------------------------------CCTAACCC---GTGTTTA-TCTACTCTTGTTGCTTT-------GGCAGGCCG-TGGC-CT-C--CAC-TGT-----GGGCTCT-GCCTGC--ATGTGCCTGCCAGAGGA-----CCAAACTCT-GAAT-TTT-AGT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTGTGGCATTCCGCAGGGCATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGCCT-GGC-TTGGTGTTGGGGCTT-GC-GGTCT---CGCAACTCC-------------------TAAAATCAGTGGCGGTGCCGGTGGGCT---CTACGCGTAGTA-ATT-CTTCTCGCGATTGAGTCCCTCT--GGTTACTT----------------------------GCCAGAACCCCC--AA--TTTC--TCAGGTT-GACCT-CGGATCAGGTAGGGATACCC-GCTGAACTTAAGCATATCAATAAGCGGAGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phialocephala_urceolata_JN053273 -----CATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTA-------------------------------AAAAA--GGATACTGGGAA------------------------------------------------------------------------------------------------------------------------------------ACCGGTAGA------------------------------------CCCCACCC---GTGTTTA-TCTACTCTTGTTGCTTT-------GGCAGGTCG-TGGT-CT----CCACCGT-----GGACTCT-ATCCGC--GTGTGCCTGCCAGAGGA-----CCAAACTCT-GAAT-ATT-AGT-G-ATGTCCGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGGTGGTATTCCGCCGGGCATGCCTGTTCGAGCGTCATAATAGCCA-CTCAAGCAT-AGC-TTGGTATTGGAGTTC-GC-GGTCT---CGCGGCCCC-------------------TAAAATCAATGGCGGTGCCGGTGGGCT---CTAAGCGTAGTA-AAT-CTCCTCGCTATAGAGTTAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cadophora_hiberna_AF530462 ---------------------------------------------------------------ATT--------------------------------AAAAA--GGATACCGGGAA------------------------------------------------------------------------------------------------------------------------------------ACCGGTAGA------------------------------------CCCCACCC---GTGTCTA-TCTACTCTTGTTGCTTT-------GGCAGGCCGT-GG-TCTCC----ACAGC-----GGGCTCT-GCCTGT--ATTTGCCTGCCAAAGAA-----CCAAACTCT-GAAT-TTT-AGT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGATTCATCGAATCTTTGAACGCACATTGCGCCCTGTGGTATTCTGCAGGGCATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGCCT-AGC-TTGGTATTGGGGTTC-GC-GGTCC---CGCGGCCCC-------------------TAAAATCAGTGGCGGTGCCGGTGGGCTT--CTAAGCGTAGTA-AAT-CTCCTCGCTATAGAGTCTCTCCCCGGTTGCTC----------------------------GCCAAAACCCCCC-AT--TTTT--TACGGTT-GACCT-CGGATCAGGTAGGGATACCC-G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phaeomollisia_piceae_EU434836 --------------------------------------------------------------CATTA-------------------------------CAAG----------------------------TGAGGCC--GCCGAACACC-GGTCAAACGGTGGGG---------AGGCGGCTAAC-------------------------------------------------------------------------------------------------------------ACCCACCC---GTGTCTA-CATACTCTTGTTGCTTT-------GGCGGGCCGTGGC--CTCC----ACTGCGGGCTCTGCTCT-GCTCGT--GTGTGCCCGCCAGAGGA-----CCAAACTCT-GAAT-GTT-AGT-G-ATGTCTGA--GTACTATTTAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTGTGGTATTCCGCAGGGCATGCCTGTTCGAGCGTCATTT-AACCA-CTCACGCCT-GGCGT-GGTGTTGGGGCACGCG-GTCTC----GCGGCCCT-------------------CGAAAGCAGTGGCGGCGCCGGTGGGCT---CTAAGCGTAGTACATA-CTCC-CGCTATAGAGTTCCCTC--GGTGGCTC----------------------------GCCAG-AACCCCCTAATTTTTA---CCGGTT-GACCT-CGGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phialocephala_compacta_AF486125 -------------------------------------TCCGTAGGTGAACCTGCGGAAGGATCATTA--------------------------------CAAG--TGAAGCGGT-------------------------CGAGCACTCG----------------------------------------AGAGAGTGATTAGGCTGCTTACA-----------------------------------------------------------------------------------CCCACCC---GTGTCTACA-TACTCTTGTTGCTTT-------GGCGGGCCGTGGCCT-----------CCACTACGGGCTCTGCTCGC---GTGTGCCCGCCAGAGGA-----CCAAACTCT-GAAT-GTT-AGTA--ACGTCTGA--GTATTATTTAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAACCATCGAATCTTTGAACGCACATTGCGCCCTGTGGTATTCCGCAGGGCATGCCTGTTCGAGCGTCATTTGA-CCA-CTCAAGCCCAGCTT--GGTGTTGGGGCAC-GC-GGCTC---CGCGGCCCT-------------------TAAAGACAGTGGCGGCGCCGGTGGGCT---CTAAGCGTAGTACATA-CTCC-CGCTATAGAGTTCCCCC--GGTGGCTC----------------------------GCCGGAACCCCC--AATCTTTT--ACAGGTT-GACCT-CGGATCAGGTAGGGATACCC-GCTGAACTTAAGCATATCAATAAGCGGAGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phialocephala_fortinii_AY249076 ------------------------------------------------------------------------------------------------CAAGTGA--GGCTACCGAACA--------------------------------------------------------------------------------------------ACGTTGGAAACGCA-----------------------------GGTTAGG-----------------------AGCTAC------ACCCACCC---GTGTTTA-CATACTATTGTTGCTTT-------GGCGGGCCGT-GG-CCTCC----ACTGC-----GGGCTCT-GCTCGT--GTGTGCCCGCCAGAGAA-----CCAAACTCT-GAAT-GTT-AGT-G-ATGTCTGA--GTACTATCTAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTGTGGTATTCCGCAGGGCATGCCTKTTCGAGCGTCATTTAA-CCA-CTCACGCCTAGC--GTGGTATTGGGGCAC-GC-GGTCTC--CGCGGCCCT-------------------CAAAATGAGTGGCGGCGCCGGTGGGCT---CTAAGCGTAGTACATA-CTCC-CGCTATAGAGTTCCCCC--GGTGGCTC----------------------------GCCAGAACCCCC--AATTTTT---CACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Phialocephala_glacialis_EU434843 --------------------------------------------------------------CATTAA------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGGTTATGGGTG------CACGT-CGCGTAAGCG--------ACCTCTCCCCTCTC------------CTCCACCC---GTGTCTA-CATACTCTTGTTGCTTT-------GGCGGGCCG-TGGC-CT----CCACTAC-----GGGTTCT-GCTCGT--ACGTGCCCGCCAGAGGA-----CCAAACTCT-GAAT-TTT-AGT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTATGACCA-CTCACGCCTGGCGT--GGTGTTGAGGCAC-GC-GGTTC---CGCGGCCCT-------------------CAAATCCAGTGGCGGCGCCGGTTGGCT---CTAAGCGTAGTA-AAA-CTTCTCGCTTGAGGGTCCTCCC--GGTGGCTC----------------------------GCCAGAACCCCCC-AACTTCT---TAAGGTT-GACCT-CGGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phialocephala_dimorphospora_AF486121 -------------GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTA-----------------------------ATCAGT---GGAT--------------------------------------------------------------------------------------------------CCGGCGGGGG----ACTCGTAAAAGAGGAT------CCCCGT-CGGGTAGAC-----------------------------------CTCCACCC---GTGCCTA-CCTACTCTTGTTGCTTT-------GGCGGGCCG-TGGC-CT----CCACTAC-----GGGCTCT-GCTCGT--ACGTGCCCGCCAGAGGA-----CCAAACTCT-GAAT-ATT-AGT-G-ATGTCTGA--GAACTATTTAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTGTGGTATTCCGCAGGGCATGCCTGTTCGAGCGTCATTTAGACCA-CTCACGCCTGGCGT--GGTATTGGGGCAC-GC-GGTTC---CGCGGCCCT-------------------CAAAATCAGTGGCGGCGCCGGTAGGCC---CTAAGCGTAGTA-AAT-CTTCTCGCTATAGGGTCCTCTC--GGTGGCTC----------------------------GCCAGAACCCCC--AACTTCT---CAAGGTT-GACCT-CGGATCAGGTAGGGATACCC-GCTGAACTTAAGCATATCAATAAGCGGAGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phialocephala_repens_EU434847 --------------------------------------------------------------CATTAA-----------------------------TCAGT---GGAT--------------------------------------------------------------------------------------------------CCGGCGGGGT----ACTCTTCGG--AGGAT------CCCCGT-CGGGTAGAC-----------------------------------CTCCACCC---GTGTTTA-TCTACTCTTGTTGCTTT-------GGCGGGCCG-TGGC-CTCC----ACTAC-----GGGCTCT-GCTCGT--ACGTGCCCGCCAGAGGA-----CCAAACTCT-GAAT-ATT-AGT-G-ATGTCTGA--GAACTATTTAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTGTGGTATTCCGCAGGGCATGCCTGTTCGAGCGTCATTTAGACCA-CTCACGCCTGGCGT--GGTATTGGGGCAC-GC-GGTTT---CGCGGCCCT-------------------CAAAATCAGTGGCGGCGCCGGTAGGCC---CTAAGCGTAGTA-AAT-CTCCTCGCTATAGGGTCCTCTC--GGTGGCTC----------------------------GCCAGAACCCCC--AACTTCT---TAAGGTT-GACCT-CGGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phialocephala_botulispora_AF083198 -------------GGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGGAAGGATCATAT-------------------------------CAGT---GG---------------------------------------------------------------------------------------------------TCCGGCGGGGAAACCC-TCTCCCCCGAGAGGGGGTCGCCTCGC-CGGGTAGAC-----------------------------------CTCCACCC---GTGCTTA-CCTACTCTTGTTGCTTT-------GGCGGGCCG-TGGC-CTCC----ACTAC-----GGGCTCT-GCTCGT--ACGTGCCCGCCAGAGGA-----CCAAACTCT-GAAT-ATT-AGT-G-ATGTCTGA--GAACTATTTAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTGTGGTATTCCGCAGGGCATGCCTGTTCGAGCGTCATTTAGACCA-CTCACGCCT-GGC-GTAGTGTTGGGGCAC-GC-GGTTC---CGCGGCCCT-------------------CAAAATCAGTGGCGGTGCGGGTAGGCC---CTAAGCGTAGTA-AAT-CTCCTCGCTATAGGGTCCTCTC--GGTGGCTC----------------------------GCCAGAACCCCC--AA-CTTCT--TAAGGTT-GACCT-CGGATCAGGTAGGGATACCC-GCTGAACTTAAGCATATCAATAAGCGGAGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cadophora_finlandica_AF486119 TAGTCGGTCTCTGCTCGAAAGGGCAGAGCCTAGCGCGTCCGTAGGTGAACCTGCGGAAGGATCATTAA----------------------------------------------------------------------------------------------------------------------AGAATCGCCCCGTTTTTTGAAATGGGTTCTATT---------------------------------------------------------------------------CCCAAACC---GTGTATACA-TACCTTTGTTGCTTT-------GGCAGGCCGCCTTTT--AG---GCG-TC-----GG-CTCC-GGCTGA--CTGCGCCTGCCAGAGGA----CCCAAACTCT-TTT--GTTTAGT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGCCTCGGCTT-GGTCTTGGGGTTC-GC-GGTTT---CGCGGCCCT-------------------TAAAATCAGTGGCGGTGCCGTCTGGCT---CTAAGCGTAGTA-ATT-CTC-TCGCTATAGGGTCCAGGT--GACCACCT----------------------------GCCATAACCCCC--ATTCTT----TACGGTT-GACCT-CGGATCAGGTAGGGATACCC-GCTGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Chloridium_paucisporum_AU938675 --------------------------------------CCGTAGGTGAACCTGCGGAAGGATCATT-------------------------------------------------------------------------------------------------------------------------------------------AAAGAATCGCCCCGTTTTTT------GAAAT--------------GGGTTCTATT----------------------------------CCCAAACC---GTGTATAC-ATACCTTTGTTGCTTT-------GGCAGGCCG------------CCTTTTAGGCGTCGGCT-CCGGCT--GACTGCGCCTGCCAGAGGA----CCCAAACTC--TTTT-GTTTAGT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGCCTCGGTTTGGTCTTGGGGT--TCGC-GGTTT---CGCGGCCCT-------------------TAAAATCAGTGGCGGTGCCGTCTGGCT---CTAAGCGTAGTA-ATT-CTC-TCGCTATAGGGTGCCA----GGTG--ACCACCT-----------------------GCCAT-AACCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Meliniomyces_bicolora_Y394885 -------------------------------------TCCGTAGGTGAACCTGCGGAAGGATCATT-------------------------------------------------------------------------------------------------------------------------------------------AAAGAATCGCCCCGTTTTTT------GAAAT--------------GGGTTCTATT----------------------------------CCCAAACC---GTGTATAC-ATACCTTTGTTGCTTT-------GGCAGGCCG------------CCTTTTAGGCGTCGGCTT-CGGCT--GACTGCGTCTGCCAGAGGA----CCCAAACTC--GTTT-GTTTAGT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGCCTCGGCTTGGTCTTGGGGTT--CGC-GGTCT---CGCGTCCCT-------------------TAAAATCAGTAGCGGTGCCGTCTGGCT---CTAAGCGTAGTA-ATT-CTC-TCGCTATAG-----------GGT-CCCGGCGGTTGCCT------------------GCCAG-AACCCCCCATTTTTT----ACGGTT-GACCT-CGGATCAGGTAGGGATACCC-GCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACACGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCTCTTTCAGGGTCCGAGTTGTAATTTGTAGAAGATGCTTTGGGTGTGGCTCCGGTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTACGTGACTGGGTGCCTTCGCTCGTGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCGCGCTGCTGATCATCCGAGCTTTTGCCCGGTGCACTCGGCAGCGCTCAGGCCAGCATCGGTTTTGGTGGGCGGATAAAGGCCTTGGGAATGTAGCTCTCTTCGGGGAGTGTTATAGCCCTCGGTGCAATGCGCCCTACCGGGACCGAGGACCGCGCTTCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCG Meliniomyce_svraolstadiae_AJ292199 --------------------------------------------------------------CATTAA-------------------------------------------------------------------------------------------------------------------------------------------AGAATCGCCCCGTTTTTT------GAAAT--------------GGGTTCTATT----------------------------------CCCAAACC---GTGTATA-CATACCTTTGTTGCTTT-------GGCGGGCCGCCTT-------------CGGGCGTTGGCTTCTAGCT--GACTGCGCCCGCCAGAGGA----CCCAAACTC--GTTT-GTTTAAT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGCCTTGGCTTGGTATTGGGGTTTC-GC-GGTTC---CGCGGCCCT-------------------TAAAATCAGTGGCGGTGCCGTCTGGCT---CTAAGCGTAGTA-ATT-CTC-TCGCTATAGGGTCCCGGC--GGTGGCTT----------------------------GCCAGAACCCCCCTATTTTTC---TATGGTT-GA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Meliniomyces_variabilis_EF093167 -------------------------------------TCCGTAGGTGAACCTGCGGAAGGATCATT-------------------------------------------------------------------------------------------------------------------------------------AAAAAAAGAGAAACGCCCCATTTTTTTCATAAGAA-T--------------GGGTTCTATTC--------------------------------CCTTAAACC---GTGTCTAC-ATACCTTTGTTGCTTT-------GGCAGGCCG-------------CCCTCGGGCGTCGGCT-CCGGCT--GATAGTGCCTGCCAGAGGA----CCCAAACTC---TAT-GTTTAGT-G-ATGTCTGA--GTACTATATAATA-TTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTTAACCA-CTCAAGCCTG-GCTTGGTATTGGGGTTTTCGC-GTGCT---CGCGGCCCT-------------------TAAAATCAGTGGCGGTGCCGTCTGGCT---CTAAGCGTAGTA-ATTTCTC-TCGCTATAGGGTTCC-----GGT-GGTT-ACTT-----------------------GCCA-AAACCCCCCATTTTTT--CTA-GGTT-GACCT-CGGATCAGGTAGGGATACCC-GCTGAACTTAAGCATATCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phialocephala_lagerbergii_AF083197 -------------GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAA-----------------------------TCAGT---GGAT--------------------------------------------------------------------------------------------------CCGGCGGGGAATCCCCTCTCCCCCGAGAGGGGGTCGCCTCGC-CGGGTAGAC-----------------------------------CTCCACCC---GTGCTTA-CCTACTCTTGTTGCTTT-------GGCGGGCCG-TGGC-CTCC----ACTAC-----GGGCTCT-GCTCGT--ACGTGCCCGCCAGAGGA-----CCAAACTCT-GAAT-ATT-AGT-G-ATGTCTGA--GAACTATTTCATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTGTGGTATTCCGCAGGGCATGCCTGTTCGAGCGTCATTTAGACCA-CTCACGCCTGGCGT--GGTGTTGGGGCAC-GC-GGTTC---CGCGGCCCT-------------------CAAAATCAGTGGCGGCGCCGGTAGGCC---CTAAGCGTAGTA-AAT-CTCCTCGCTATAGGGTCCTCTC--GGTGGCTC----------------------------GCCAGAGCCCC---AACTTCTT--TAAGGTT-GACCT-CGGATCAGGTAGGGATACCC-GCTGAACTTAAGCATATCAATAAGCGGAGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Mollisia_cinerella_AY259135 ----------------------------------------------------------GGATCATTAA--------------------------------------------------------------------------------------------------------------------------------------------------------CCATT---------------GGATACCTT-CGGGTATA------------------------------------TCCCATCC---GTGTCTA-CATACTCTTGTTGCTTT-------GGCAGGCCG-TGGT-CA-C--CCACTGT-----GGGCTAT-GCCTGC--ATGTGCCTGCCAGAGGA-----CCAAACTCT-GAAT-ATT-AGT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCACCCGGTGGTATTCCGCCGGGTATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGCCTGTCTT--GGTGTTGGGGTT--GCGAATCTTT-TGCAGCCC--------------------TCGAGTCTCGTAGCGCCACCTGTGGGTT--CTAAGCGTAGTA-ATTTCTCCTCGCTATAGAACCTGCTGGGGGAAAAGTATAATTCGTAGCCTGGTTCTATGTGTCCGCTATCAAACCCCCAATTTTT---TAAGGTT-GACCT-CGGATCAAGTAGGGATACCC-GCTGAACTTAAGCATATCAATAAGCGGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Mollisia_minutella_EU314681 ---------------------------------------------------------------ATT-----------------------------AACCAAAA--CGATACCCTCA--------------------------------------------------------------------------------------------------------------------------------------CCGGTATA------------------------------------CCCCACCC---GTGTCTA-TCTACTCTTGTTGCTTT-------GGCAGGCCG-TGGT-CA-C--CCACTGC-----AGGCTCT-GCCTGC--ATGTGCCTGCCAGAGGA-----CCAAACTCT-GAAT-TTT-AGC-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTGTGGTATTCCGCAGGGCATGCCTGTTCGAGCGTCATTATAGCCA-CTCAAGCCT-CGC-TTGGTGTTGGGGCTC-GC-AAACT---TGCGGCCTC-------------------TAAAATCAGTGGCGGTGCCGGTAGGCT---CTGAGCGTAGTA-CAT-CTCCTCGCTATAGAGTCCTATC--GGTCCCCT----------------------------GCCAAAACCCCC--ATATTTTT--ATAGGTT-GACCT-CGGATCAGGTAGGGATACCC-GTCTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Phialocephala_sphaeroides_AY524844 TAGTCGGGCCCTGTGACAAGTCATAGGGGCTTCTGCGTCCGTAGGTGAACCTGCGGAAGGATCATTA-----------------------------CCCAAAA--GGATACCCT-----------------------------------------------------------CGTGGTATA----------------------------------------------------------------------------------------------------------------CCCCACCC---GTGTCTA-TCTACTCTTGTTGCTTT-------GGCAGGCCG-TGGTCTTCC----ACTGT-----GGGCTCT-GCCTGC--ATGTGCCTGCCAGAGGA-----CCAAACTCT-GAAT-TTT-AGT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTGTGGTATTCCGCAGGGCATGCCTGTTCGAGCGTCATTACAACCA-AAATTAAGCCCAGCTTAGTGTTGGGGTTCGCA-GTTCT----GCGGCCCT-------------------TAATATCAGTGGCGGTGCCTGTAGGCT---CTGAGCGTAGTA-ATT-CTTCTCGCTATAGAGCCCTATA--AGTGTCTT----------------------------GCCAG-AACCCCC-ATATTTTT--TCAGGTT-GACCT-CGGATCAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Leptodontidium_orchidicola_AF214576 --------------------------------------------------------------CATTA-------------------------CTAGAGCAAA---GGATAGACA-----------------GCGCCC--GCGGAGCTCGC----------------TCCCGGGGCTACCCT-------ACTCCCGTAGGGTTTAGAGTCGTCGGG------CCTCTC---GGAGAAG---------CTC-GGTCCTGAA-----------------------------------CTCCACCC---TTGAATAAACTACCTTTGTTGCTTT-------GGCGGGCCGCC--TCG--------TGCCA--GCGGCTTCGGCTGTT---GAGTGCCCGCCAGAGGA-CCCCCCCAACTCTTGTT--TTT-AGT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGC-TCTCGCTTGGTATTGGGGTTC-GC-GGTTT---CGCGGCCCC-------------------TAAAATCAGTGGCGGTGCCTGTCGGCT---CTACGCGTAGTA-ATA-CTCCTCGCGATTGAGTCCGGTA--GGTCTACTT---------------------------GCCAGCAACCCCT-AATTTTTT--TAAGGTT-GACCT-C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Mollisia_rhizophila_JN053274 --------------------------------------------------------AAGGATCATTA-------------------------CTAGAGCAAA---GGATAGACA-----------------GCGCCC--GCGGAGCTCGC----------------TCCCGGGGCTACCCT--------CTTTGGTAGGGTTTAGA-GTCG-TCGGG----CCTCTC---AGAGAAG---------CTC-GGTCCTGAA-----------------------------------CTCCACCC---TTGAATAAACTACCTTTGTTGCTTT-------GGCGGGCCGCCTCGT-------GCCAGC-----GGCTTCG-GCTGTT--GAGTGCCCGCCAGAGGA---CCCATAACTCT-TGTT-TTT-AGT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGC-TCTCGCTTGGTATTGGGGTTC-GC-GGTTT---CGCGGCCCC-------------------TAAAATCAGTGGCGGTGCCTGTCGGCT---CTACGCGTAGTA-ATA-CTCCTCGCGATTGAGTCCGGCA--GGTCTACTT---------------------------GCCAGCAACCCCT-AATTTTTTT-TAAGGTT-GACCT-CAAATCAGGTAGGAGTACCC-GCTGAACTTAAGCATATCAATAAGCGGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cadophora_luteoolivacea_AY249066 --------------------------------------------------------------------------------------------CTAGAGCAAA---GGACAGGCA------GCGCCCCAC--AGAAGC-------TTGCTTCG---TGGCGGGGCTACCCTACTTCGGTAGGGTTTAGAGCCGTCG-ACCCTCTCGGAGAAGGTCGG----TCCTGAA-------------------------------------------------------------------CTCCACCC---TTGAATAAACTACCTTTGTTGCTTT-------GGCGGGCCG----C-CTCG--CGCCAGC-----GGCTTCG-GCTGTT--GAGTGCCCGCCAGAGGA----CCACAACTCT-TGTT-TTT-AGT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGC-TCTCGCTTGGTATTGGGGTTC-GC-GGTTT---CGCGGCTCC-------------------TAAAATCAGTGGCGGTGCCTGTCGGCT---CTACGCGTAGTA-ATA-CTCCTCGCGTCTGGGTCCGGTA--GGTCTACTT---------------------------GCCAGCAACCCCC-AATTTTT---ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cadophora_gregata_U66731 ----------------------------------------------------GCGGAAGGATCATTA-------------------------CTAGAGCAAA---GGATAGGGA-------GACCCCAC--AGGAGCTT--------------------------------GCTCCGTGGTGGGCTA-CCCGTCG-AGCCTCTCGAAGAAGCTCGG----TCCTGAA-------------------------------------------------------------------CTCCACCCT---TGAATAAATTACCTTTGTTGCTTT-------GGCGGGCCG----C-CTCG--CGCCAGC-----GGCTTCG-GCTGTT--GCGTGCCCGCCAGAGGA----CCCCAACTCT-TGTT-TTT-AGT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGC-TCTCGCTTGGTATTGGGGTTC-GC-GGTTC---CGCGGCCCC-------------------TAAAATCAGTGGCGGTGCCTGTCGGCT---CTACGCGTAGTA-ATA-CTCCTCGCGATTGAGTCTGGCA--GGTCTACCT---------------------------GCCAGCAACCCCC-AAATCTTT--ACAGGTT-GACCT-CGGATCAGGTAGGGATACCCCGCTGAACTTAAGCATATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cadophora_fastigiata_AY249073 --------------------------------------------------------------------------------------------------ATAAA--CCTAGTCGT------------------------TCGCGTACACAGGGGCAACCCTCGCGCGATGTCAGCAATACCTA----------------------------------------------------------------------------------------------------------------GGTCACCC---TTGAATAAACTACCCTTGTTGCTTT-------GGCGGGCCGCCCCTCG-------GGGCCA--GCGGCTTCGGCTGCT---GCGCGCCCGCCAGAGGA----CCACAACTCTTGTT--TTT-AGT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGCCTTCGCTT-GGTATTGGGGTTC-GC-GGCTG---CGCGGCCCC-------------------TAAAATCAGTGGCGGTGCCTGTCGGCT---CTACGCGTAGTA-ATA-CTCCTCGCGTCTGGGTTCCGGTA-GGTTGCTT----------------------------GCCAGCAACCCCT-AAATTTTTT-ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cadophora_melinii_AY249072 --------------------------------------------------------------------------------------------------ATAAA--CCTAGTCGT------------------------TCGCGTACACAGGGGCAACCCTCGCGCGATGTCAGCAATACCTA----------------------------------------------------------------------------------------------------------------GGTCACCC---TTGAATAAACTACCCTTGTTGCTTT-------GGCGGGCCGCCCCTCG-------GGGCCA--GCGGCTTCGGCTGCT---GCGCGCCCGCCAGAGGA----CCACAACTCTTGTT--TTT-AGT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGCCTTCGCTT-GGTATTGGGGTTC-GC-GGCTG---CGCGGCCCC-------------------TAAAATCAGTGGCGGTGCCTGTCGGCT---CTACGCGTAGTA-ATA-CTCCTCGCGTCTGGGTTCCGGTA-GGTTGCTT----------------------------GCCAGCAACCCCT-AAATTTTTT-ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Mollisia_dextrinospora_AY259134 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAATAAA---CCTAGTCGT----------------TCGCGTACATAGGGGCAACCCTCGCGTGATGTCAGC-AATACCTAGGTAACCC---TTGAATAAACTACCCTCGTTGCTTT-------GGCGGGCCGCCTT--CTA------GGCCA--GCGGCTTCG-GCTGCT--GCGCGCCCGCCGGAGGA----CCACAACTCT-TGTT-TTT-AGT-G-ACGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGCCCTCGCTT-GGTATTGGGGCTC-GC-GGTCT---CGCGGCCTC-------------------TAAACTCAGTGGCGGTGCCTGTCGGCT---CTACGCGTAGTA-ATA-CTCCTCGCGTCTGGGTCCGGTA--GGTTGCCT----------------------------GCCAGCAACCCCA-AATTTTT---ACAGGTT-GACCT-CGGATCAGGTAGGGATACCC-GCTGAACTTAAGCATATCAATAAGCGGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Cadophora_malorum_DQ404350 -------------GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTA-------------------------------ACAAA--CCTAAGGCGC-----------------------TCGCGCTCACA-------------------------------------------------------------------------------------------------------------------------------------------------GGTAACCC---TTGAATAAACTACCTTCGTTGCTTT-------GGCGGGCCGCC---TCTC----GAGGCCA--GCGGCTTCGGCTGCT---GCGCGCCCGCCAGAGGA----CCACAACTCTTGTT--TTC-AGT-G-ATGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTCGAGCGTCATTATAACCA-CTCAAGCCTTCGCTT-GGTATTGGGGCTC-GC-GGTCG---CGCGGCCCC-------------------TAAAATCAGTGGCGGTGCCGGCTGGCT---CTACGCGTAGTA-ATA-CTCCTCGCGTCTGGGTCCGGTC--GGTTGCCT----------------------------GCCAGCAACCCCCCA--TTTTT--ACAGGTT-GACCT-CGGATCAGGTAGGGATACCC-GCTGAACTTAAGCATATCAATAAGCGGAGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Sclerotinia_sclerotium_FJ810516 --------------------------------------CCGTAGGTGAACCTGCGGAAGGATCATTA-C-AGAGTTCAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCGAAA-------GGGT---AGAC--CTCCCACCCTTGTGTATT-ATTACTTT-GTTGCTTT-------GGCGAGC------TGCTCTT---------CGGGGCCTT-----------GTATGCTCGCCAGAGAA----TATCAAACTCTTTTT-ATT-AAT-G-TCGTCTGA--GTACTATATAATA-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCAACC---CTC--AAGCTCA--GCTTGGTATTGAGTCCA-TGTCAGTAATGGCAGGCTCT---AAAATCAGTGGCGGCGCCGCTGGG-TCCTGAACGTAGTAATATCTC-TCGTTACAGGTTCTC-----GGT-GTGCTTCT---GCCAA--AACCC-AAATTTTCT--AT--GGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ; END; BEGIN TREES; Title 30_Taxon_Result; LINK Taxa = Taxa; TRANSLATE 1 Phialocephala_scopiformes_AF486126, 2 Mollisia_cineralla_AJ430228, 3 Mollisia_fusca_AY259138, 4 Phialocephala_urceolata_JN053273, 5 Cadophora_hiberna_AF530462, 6 Phaeomollisia_piceae_EU434836, 7 Phialocephala_compacta_AF486125, 8 Phialocephala_fortinii_AY249076, 9 Phialocephala_glacialis_EU434843, 10 Phialocephala_dimorphospora_AF486121, 11 Phialocephala_repens_EU434847, 12 Phialocephala_botulispora_AF083198, 13 Cadophora_finlandica_AF486119, 14 Chloridium_paucisporum_AU938675, 15 Meliniomyces_bicolora_Y394885, 16 Meliniomyce_svraolstadiae_AJ292199, 17 Meliniomyces_variabilis_EF093167, 18 Phialocephala_lagerbergii_AF083197, 19 Mollisia_cinerella_AY259135, 20 Mollisia_minutella_EU314681, 21 Phialocephala_sphaeroides_AY524844, 22 Leptodontidium_orchidicola_AF214576, 23 Mollisia_rhizophila_JN053274, 24 Cadophora_luteoolivacea_AY249066, 25 Cadophora_gregata_U66731, 26 Cadophora_fastigiata_AY249073, 27 Cadophora_melinii_AY249072, 28 Mollisia_dextrinospora_AY259134, 29 Cadophora_malorum_DQ404350, 30 Sclerotinia_sclerotium_FJ810516; TREE Strict = (30:3.579216,((((22:0.051804,23:0.008657):0.095753,(24:0.064036,25:0.031042):0.036451):0.104672,(28:0.059768,(29:0.022001,(26:0.0,27:0.0):0.111664):0.050272):0.177339):0.16717,(4:0.137006,5:0.073591,19:0.4805,20:0.172835,21:0.376872,(3:0.111727,(1:0.072275,2:0.138809):0.0):0.05492,(13:0.087293,(16:0.052634,17:0.087334,(14:0.022119,15:0.041098):0.020828):0.122857):0.498828,((8:0.089425,(6:0.097346,7:0.200285):0.018976):0.064424,(9:0.126772,((10:0.02081,11:0.013499):0.019138,(12:0.030607,18:0.006166):0.012589):0.028561):0.063697):0.113467):0.218258):3.579216); TREE MajRul = (30:3.3103445,((((22:0.051779,23:0.009546):0.091825,(24:0.064935,25:0.031283):0.038972):0.10799,(28:0.059603,(29:0.021266,(26:0.0,27:0.0):0.113308):0.051701):0.166025):0.153206,((13:0.067701,((14:0.024649,15:0.041494):0.006607,(16:0.051759,17:0.085184):0.013531):0.140299):0.309944,(19:0.452536,(20:0.084004,21:0.248869):0.10992,((4:0.125107,5:0.058562):0.019284,(3:0.108121,(1:0.072956,2:0.135562):0.0):0.051924):0.0,((8:0.091545,(6:0.095455,7:0.194194):0.019993):0.057104,(9:0.125184,((10:0.020625,11:0.013828):0.019211,(12:0.030622,18:0.00617):0.01256):0.028629):0.067732):0.105759):0.165407):0.07004):3.3103445); END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 1472; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 1472; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1472; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1307457172468; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 1417187132884156560; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 4201094783147110539; mqVersion 273; checksumv 0 2 2244295958 null getNumChars 1472 numChars 1472 getNumTaxa 30 numTaxa 30 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 368892.0 sumSquares 368892.0 NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 273; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1118 531; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.ManageTrees.ManageTrees; tell It; getTreeBlock 0; tell It; setSelected 1; attachments ; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #1417187132884156560 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 3365.1307457139983.7641426165202081277; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 845 464; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; makeTreeWindow #1417187132884156560 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 3393.1307457151552.2452039644922601691; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 845 464; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 2; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;