#NEXUS [written Tue Jun 14 13:06:03 MST 2011 by Mesquite version 2.73+ (build 546) at pryor6/150.135.37.176] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=66; TAXLABELS Stemphylium_botryosum Stemphylium_vesicarium Stemphylium_callistephi Pleospora_herbarum_ Alternaria_infectoria Alternaria_ethzedia Alternaria_conjuncta Alternaria_oregonensis Alternaria_cetera_ Embellisia_abundans_ Crivellia_papaveracea Brachycladium_papaveris Undifilum_bornmuelleri Undifilum_oxytropis_ Embellisia_dennisii_ Embellisia_eureka_ Embellisia_tumida Embellisia_lolii_ Embellisia_planifunda Embellisia_proteae Embellisia_hyacinthi Embellisia_novae_zelandiae Ulocladium_oudemansii Ulocladium_alternariae Embellisia_thlaspi Embellisia_allii Embellisia_telluster Embellisia_chlamydospora Nimbya_scirpicola Nimbya_caricis Nimbya_scirpovora Nimbya_scirpinfestans Embellisia_phragmospora Embellisia_didymospora Ulocladium_consortiale Ulocladium_atrum Ulocladium_botrytis Ulocladium_chartarum Ulocladium_septosporum Ulocladium_obovoideum Embellisia_indefessa Alternaria_cheiranthi Alternaria_mimicula Embellisia_conoidea Alternaria_brassicicola Alternaria_sonchi Alternaria_cinerariae Alternaria_carotiincultae Alternaria_radicina Alternaria_smyrnii Alternaria_selini Alternaria_petroselini Alternaria_solani Alternaria_porri Alternaria_dauci Alternaria_tagetica Alternaria_macrospora Alternaria_pseudorostrata Nimbya_celosiae Nimbya_alternantherae Nimbya_perpunctulata_BMP1992 Alternaria_longipes Alternaria_alternata Alternaria_limoniasperae Alternaria_arborescens Alternaria_tenuissima ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=491; FORMAT DATATYPE = DNA GAP = - MISSING = N; MATRIX Stemphylium_botryosum CGCTCTCTTCGCCGCTGCC---GGCCTCGCTGCCGCCGCTCCCTTCGAGACTCGCCAGGATTATGCCTCCTGCCCTGTCTCCACCCAGGGTGACTACGTCTGGAAGATCTCCGAGTTCTCCGGCCGCAAGCCCGAGGGCACCTACTACAACAGCCTGAGCTTCAACATCAAGGCCACCAACGAGGGCACTCTCGACTTCACCTGCTCTGCCCAGGCCGACAAGCTTGAAGACGACAAGTTCTATCCTTGCGGCGAGAAC-AGCTCCATGAGCTTCGCCTTCCAGAGCGACCGCAATGGTCTTCTCTTCCGCCAGGACGTCAGCAACGAGTAAG--TCTTCCCGATA--T--GGCA---TCTCACTTACG----AATAATTGCTAA-TTG----TTTCATC-AGCATCACCTACGTCGCTACTGCCACCCTTCCCAACTACTGCCGCGCTGGAGGCGACGGCCCCAAGGACGTTATCTGCCAGGGTGCCTCT Stemphylium_vesicarium CGCTCTCTTCGCCGCTGCC---GGCCTCGCTGCCGCCGCTCCCTTCGAGGCTCGCCAGGCTGATGCCTCCTGCCCTGTCTCCACCCAGGGTGACTACGTTTGGAAGATCTCCGAGTTCTCCGGCCGCAAGCCCGAGGGCACCTACTACAACAGCCTGAGCTTCAACATCAAGGCCACCAACAAAGGAACTCTCGACTTCACCTGCTCTGCCCAGGCCGACAAGCTCGAGGACGACAAGTTCTACTCTTGCGGCGAGAAC-AGCTTCATGAGCTTCGCCTTCCAGAGCGACCGCAACGGTCTTCTCTTCCGCCAGGACGTCAGCGACGAG---------------------------------------------------------------------------ATCACCTACGTCGCTACCGCCACCCTCCCCAACTACTGCCACGCTGGAGGCAACGGCCCCAAGGACTTCGTCTGCCAGGGTGTCTCT Stemphylium_callistephi CACTCTCTTCGCCGCTGCC---GGCCTCGCTGCCGCCGCTCCCTTGGAGGCTCCCCAGGCTAATACCACCTGCCCTGTCTCCACCCAGGGTGACTACGTCTGGAAGATCTCCGAGTTCTCCGGCCGCAAGCCCGAGGGCACCTACTACAACAACCTGAGCTTCAACATCAAGGCCACCAATGGGGGCACTCTCGACTTCACCTGCTCTGCCCAGGCCGACAAGCTCGAGGAAGACGAGTTCTACTCTTGCGGCGAGAAC-AGCTTCATTAGCTTCGCCTTCCAGAGCGACCGCAGCGGTCTTCTCTTGCGCCAGGACGTCAGCGACGAG---------------------------------------------------------------------------ATCACCTACCTCGCTACCGCCACCCTCCCCAACTACTGCCGCGCTGGAGGCAACGGCCCCAACGACTTCATCTGCCAGGGTGTCTCT Pleospora_herbarum_ CGCTCTCTTCGCCGCTGCC---GGCCTCGCTGCCGCCGCTCCCTTCGAGGCTCGCCAGGCTGATGCCTCCTGCCCTGTCTCCACCCAGGGTGACTACGTTTGGAAGATCTCCGAGTTCTCCGGCCGCAAGCCCGAGGGCACCTACTACAACAGCCTGAGCTTCAACATCAAGGCCACCAACAAAGGAACTCTCGACTTCACCTGCTCTGCCCAGGCCGACAAGCTCGAGGACGACAAGTTCTACTCTTGCGGCGAGAAC-AGCTTCATGAGCTTCGCCTTCCAGAGCGACCGCAACGGTCTTCTCTTCCGCCAGGACGTCAGCGACGAG---------------------------------------------------------------------------ATCACCTACGTCGCTACCGCCACCCTCCCCAACTACTGCCACGCTGGAGGCAACGGCCCCAAGGACTTCGTCTGCCAGGGTGTCTCT Alternaria_infectoria TTCTCTCTTCGCTGCCGCT---GCCGTTGCCAGCGCCGCACCTCTCGAGGCCCGCCAGGTCGACGCATCTTGCCCTGTTGCTACCCAGGGTGACTACGTCTGGAAGATCTCCAACTTCTTCGGACGCAAGCCTGAGGGAACCTACTACAACAGCTTCGGGTTCAACATCAAGGCTACCAACGGAGGTACCCTCGATTTCAACTGCTCTTCCCAGGCCGACAAGCTTGAGGACAACAAGTTCTACTCTTGCGGCGAGAAC-AGCTTCATCGACTTCGCTTTCTCAAGCGACCGTTCCGGTCTGATCATCAAGCAGGGTGTCAGCGACGAGTAAG--TTTCTCCCATACCT--TT-GAG-TGCGCGGTTCG-TT-CAAATTTGCTAACA-------TCCCTC-AGCCTCACCTATGTCGGTACCACCACTCTTCCCAGCTACTGCCGTGCTGGAGGCAACGGCCCTAAGGACTTTGTCTGCCAGGGTGTCTCC Alternaria_ethzedia TTCTCTCTTCGCTGCCGCT---GCCGTTGCCAGCGCCGCACCTCTCGAGGCCCGCCAGGTCGACGCATCCTGCCCAGTTGCTACCCAGGGTGACTACGTCTGGAAGATCTCCAACTTCTTCGGACGCAAGCCTGAGGGAACCTACTACAACAGCTTCGGCTTCAACATCAAGGCTACCAACGGAGGTACCCTCGACTTCAACTGCTCTTCCCAAGCCGACAAGCTTGAGGATAACAAGTTCTACTCTTGCGGCGAGAAC-AGCTTCATCGACTTCGCTTTCTCAAGCGACCGTAGCGGTCTGATCATCAAGCAGGGTGTCAGCGACGAGTAAG--TTTTTCCCATGCCT--TT-GAA-TGCGCAGTTCG-TT-CAA-TTTGCTAACA------TTCCTTC-AGTCTCACCTATGTCGGTACCACCACTCTTCCCAGCTACTGCCGTGCCGGTGGCAACGGCCCCAAGGACTTCGTCTGCCAGGGCGTCTCC Alternaria_conjuncta TTCTCTCTTCGCTGCCGCT---GCCGTTGCCAGCGCCGCACCTCTCGAGGCCCGCCAGGTCGACGCATCCTGCCCAGTTGCTACCCAGGGTGACTACGTCTGGAAGATCTCCAACTTCTTCGGACGCAAGCCTGAGGGAACCTACTACAACAGCTTCGGCTTCAACATCAAGGCTACCAACGGAGGTACCCTCGACTTCAACTGCTCTTCCCAAGCCGACAAGCTTGAGGATAACAAGTTCTACTCTTGCGGCGAGAAC-AGCTTCATCGACTTCGCTTTCTCAAGCGACCGTAGCGGTCTGATCATCAAGCAGGGTGTCAGCGACGAGTAAG--TTTTTCCCATGCCT--TT-GAA-TGCGCAGTTCG-TT-CAA-TTTGCTAACA------TTCCTTC-AGTCTCACCTATGTCGGTACCACCACTCTTCCCAGCTACTGCCGTGCCGGTGGCAACGGCCCCAAGGACTTCGTCTGCCAGGGCGTCTCC Alternaria_oregonensis TTCTCTCTTCGCTGCCGCT---GCCGTTGCCAGCGCCGCACCTCTCGAGGCCCGCCAGGTCGACGCATCCTGCCCAGTTGCTACCCAGGGTGACTACGTCTGGAAGATCTCCAACTTCTTCGGACGCAAGCCTGAGGGAACCTACTACAACAGCTTCGGCTTCAACATCAAGGCTACCAACGGAGGTACCCTCGACTTCAACTGCTCTTCCCAAGCCGACAAGCTTGAGGACAACAAGTTCTACTCTTGCGGCGAGAAC-AGCTTCATCGACTTCGCTTTCTCAAGTGACCGTAGCGGTCTGATCATCAAGCAGGGTGTCAGCGAAGAGTAAG--T----CCCATACCT--TT-GAA-TGCGCGGTCCG-TT-CAAATTTGCTAACA-----TTTCC-TC-AGCCTCACCTATGTCGGTACCACCACTCTTCCCAGCTACTGCCGTGCCGGTGGCAACGGTCCTCAGGACTTCGTATGCCATGGTGTCTCC Alternaria_cetera_ CTCTTTCCTCGCTGCCGCTGCCGGTGTTGTCAGCGCCGCACCCCTCGAGGACCGCCAGGTCAACGCATCCTGCCCAGTTGCCACTCAAGGTGACTACGTATGGAAGATCTCCGAGTTCTCTGGACGCAAGCCTGAGGGAACCTACTACAACAGCTTCGGCTTCAACATCAAGGCTACCAACGGAGGTACCCTCGACTTCACCTGCTCTGCTCAAGCCGACAAGCTTGAGGACAACAAGTTCTACCCTTGCGGCCCGAAC-AGCTTCATCAGCTTCGCTTTCTCAAGCGACCGCGATGGTCTGATTATCAAGCAGGGAGTCAGCGACGAGTAAG--TTCTTCCCATACCC---TCGAA-TGCATTGCTTG-TT-CAAATGTTCTAACA-----TCCTTTAC-AGCCTCACCTATGTCGGCACTACCACCCTTCCCAACTACTGCCATGCCGGTGGAAATGGTCCTCAGGACTTTGTCTGCCAGGGTGTCGCT Embellisia_abundans_ TTCTCTCCTCGCTGCCACCGCCGGTGTTGTCGGCGCCGTGCCCTTCGAGGCCCGCCAGGTCGACGCCTCTTGCCCAGTTTCCACTCAGGGTGACTACGTCTGGAAGATCTCCGAATTCTTCGGACGCAAGCCTGAGGGAACCTACTACAACAGCTTCGGCTTCAACATCAAGGCTACCAACGGAGGTACTCTCGACTTCACCTGCTCTGCTCAAGCCGACAAGCTTGAAGACAACAAGTTCTACCCTTGCGGCCCGAAC-AGCTTCATCAGCTTCGCTTTCTCAAGCGATCGCGATGGTCTGATTATCAAGCAGGGAGACAACGGCGAGTAAG--TTCCTCCTATA------TCAAA-TGCAAGGGGGG-TT-CAAATGTTCTAACA-----TCCTTCAC-AGCCTCTCCTACGTCGGTACTACCACCCTTCCCAGCTACTGCCGCGCTGGTGGAAATGGTCCTCAGGACTTTGTCTGCCAGGGTGTCGCT Crivellia_papaveracea CTCTTTCCTCGCCGCCGCTGCCAGCGTTGTCAGCGCCGCACCCCTCGAGTCCCGTCAGGACACTACCTCATGCCCAGTCACCACCCAGGGTGACTACGTCTGGAAGATCTCTCAATTCTTCGGACGCAAGCCTGAGGGAACCTACTTCAACAGCCTAGGATTTAACATCCAGGCCACCAACGGAGGCACTCTCAACTTCACCTGCTCTGCTCAGGCCGACAGGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCCTGAGCTTCTCTTGGGACAGCGACCGCAGCGGTCTGCTCCTCAGGCAGGGTGTTAGCGACCCGTAAG--TGTTCTCCAG-AAT--TTCGGA-CACTTGCAATT---TCAGACATACTAAC-----CTCTTCCAC-AGCATCGCTTATATTGGTTCTGCCACTCTTCCCAACTACTGCCGCGCCGGCGGTAACGGCTCCCAGGACTTCGTCTGCCAAGGAGTCTCC Brachycladium_papaveris CTCTTTCCTCGCCGCCGCTGCCAGCGTTGTCAGCGCCGCACCCCTCGAGTCCCGTCAGGACACTACCTCATGCCCAGTCACCACCCAGGGTGATTACGTCTGGAAGATCTCTCAATTCTCCGGACGCAAGCCTGAGGGAACCTACTTCAACAGCCTAGGATTTAACATCAAGGCTACCAACGGAGGCACTCTCGATTTCACATGCTCTGCTCAGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCCTGAGCTTCTCTTGGGACAGCGACCGCAGCGGTCTGCTCCTAAGGCAGGGTGTTAGCGACCCGTAAG--TGTTCCCTAG-ATT--TTCACA-CACTCGCAATT----CAGACATATTAACA-----TCTTCCAC-AGCATCGCTTATATCGGTTCCGCTACTCTTCCCAACTACTGCCGCGCCGGCGGTAACGGCTCCCAGGACTTCGTCTGCCAGGGAGTCTCC Undifilum_bornmuelleri CTCTCTGTTCGCCGCCGCT---GGCCTTGTCAGCGCCGCTCCCTTTGAGTCCCGCCCGGTCAATCCATCCTGCCCAAACCCCATCGCGGGTGATTTCATTTGGAAGGTCTCTAAATTCGAGGGACGCAAGTCTGATGGAATCTAC---ACCCGCTTCAGCTTTAATATCAAGGCAACCAATGATGGTGCTCTCGAGGCCAACTGCACTGCTCAGGCCGACAAGCTTGAGGAGCACAAGTGGTATTCCTGCGAC-------AAATTATTTAGCTTCTCTTTCAACAGCGACCGCAACGGACTGCTCGTGAAGCGCGTTGAAA---ACGAGTAAGT-TTCCTCAAACTCTGAGCT------ATATTGCATC-TT-CAGATATTCTGACA-----CCTTACAC-AGAGAGACCGTTTTTGGTACCACCAGTATTCCCAACATGTGCGGCAAAGCACCAGGCACCCAA---GACTCCCCCCGCCAAAACGACGCT Undifilum_oxytropis_ CTCTCTGTTCGCCGTCGCT---GGCCTTGTCAGCGCCGCTCCCTTTGAGTCCCGCCAGGTCAATCCATC---CCC-----CCCCCGTGGGTGATAACATTTGGAAGATCTCTAAATTCTCCGGACGCAAGCCTGAGGGAACCTACTACAACCGCTTCAGCTTTAACATCAAGGCCACCAATGGTGGTACCTTGGACCTCGACTGTACTGCTGAAGCCGTCAAGCTTGAGCACC---AGTGGTATCCTTGCTCCG-GATCCGAATATATTAGCTTCTCTTTCGACAGCGACAGCAGCGGAGTGCTCTTGAAGCACATTGT---CGACGAGTAAGT-TTCCTCAAACTTTGAGCTGTAA-C-TATTGCATC-TT-CAAATATTCTGACA-----CCTTGCAC-AGCAACACCTATCTCGGTACCACCAATATTCCCGATCAGTGCAGCAAAGGACCCACCGGCCAACAGGACTCTGTTTGCCAGGGTAACTAT Embellisia_dennisii_ CTCTCTCCTCGCTGCCGCCGGCGGCCTTGTCAGCGCCGCTCCCCTCGAGTCCCGCCAGGACACCGCATCCTGCCCAGTCAGCACCAAGGGTGACTACGTCTGGAAGATCTCTGAGTTCACCGGCCGCCAGCCCGAGGGAACCTACTACAACTCGCTCGACTTCAATATCAAGGCCACCAACAATGGTACCCTCGACGCCAATTGTTCTGCCCAGGCCGACAAGCTTGAGGACCACAAGTGGTACGCTTGCGGCGAGAAC-AGCTTCCTGGACTTCTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTGAAGCAGAAGGTCAGCGACGAGTAAGTTTTCCTCCCA-GACC--TTTGAA-TGATTAGCAAT-CT-CAGATGTACTAACA-----TTTTCCAC-AGCATCACCTATGTCGGTACTGTCACTCTCCCCAACTACTGCCGCGCTGGCGGCAACGGCCCCAACGACTTCGTCTGCAACGGTGTCTCC Embellisia_eureka_ TTCTCTCTTCGCCGCCGCT---GGCCTTGCCGCCGCCGCTCCTCTTGAGTCTCGCCAGGACACCGGATCCTGCCCAGTCTCTACCACCGGCGACTACGTCTGGAAGATCTCCGAGTTCAGCGGACGCAAGCCTGAGGGATCCTACTACAACAGCTTGAGCTTCAACATCAAGGCCACCAACGGAGGCACTCTCGACTTCACCTGCGGTGCTCAGGCCGACAAGCTCGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-TCCTTCATGGACTTTTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTGAGGCAGAAGGTCAGCGACGA---------------------------------------------------------------------------CATCACCTATGTCGCTACCACCACCCTCCCTAACTACTGCCATGCCGGCGGCAACGGCCCCAGCGACTTCGTCTGCCAGGGTGTCTCC Embellisia_tumida CTCTCTCTTCGCAGCCGCT---GGCCTTGCAGCCGCCGCTCCGCTCGAGTCTCGCCAGGACACCGCATCCTGCCCTGTCTCCACCCAGGGTGACTATGTCTGGAAGATCTCTGAGTTCTTCGGACGCAAGCCTGAGGGAACCTACTACAACAGTCTGGGCTTCAACATCAAGGCCACCAACGGAGGAACTCTCGACTTCACCTGCTCTGCTTCGGCCGACAAGCTTGAGGACCACAAGTGGTACCCTTGCGGCGAGAAC-AGCTTCATTTACTTCTCGTTCGACAGCGACCGCAACGGTCTGATGTTGAAGCACGGGGAC-GC--TGCGTAAG--TTTCCCTCT-GA-T--TTCGAAATACTTTGTAGG-TTCC-GATTTACTAACATG-----TTCTTT-AGCTCTCCCTATGTCGGTACCACCACCCTTCCCAACTACTGCCGTGCCGGCGGCAATGGCCCTCAGGACTTCGTCTGCCAGGGTGTTTCT Embellisia_lolii_ CTCTCTCTTCGCCGCCGCT---GGCCTTGCCGCCGCCGCTCCCCTTGAGTCTCGCCAGGACAACGCATCCTGCCCTGTCACCACCGAGGGTGACTATGTCTGGAAGATCTCTGAGTTCTTCGGACGCAAGCCTCAAGGAACCTACTACAACAGCCTAGGCTTCAACATCCAGGCCACCAACGGAGGAACTCTCGACTTCACCTGCTCTGCTTCGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCCTCATGGACTTCTCTTTCGACAGCGACCGCAACGGTCTGCTCTTGAGGCAGAAGGTCAGCGACGAGTAAG--TTTTCCTCT-G-CT--TTCGAA-TTGTTTAGTATTTCTCA-ATTAACTAACATG-----TTTTTC-AGCATCACCTATGTCGGTACCGCCACCCTTCCCAACTACTGCCGTGCGGGCGGCAATGGCCCCCAGGACTTCGTCTGTCAGGGCGTTGCC Embellisia_planifunda CTCTCTCTTCGCAGCCGCT---GGCCTTGCAGCCGCCGCTCCGCTCGAGTCTCGCCAGGACACCGCATCCTGCCCTGTCTCCACCCAGGGTGACTATGTCTGGAAGATCTCTGAGTTCTTCGGACGCAAGCCTGAGGGAACCTACTACAACAGTCTGGGCTTCAACATCAAGGCCACCAACGGAGGAACTCTCGACTTCACCTGCTCTGCTTCGGCCGACAAGCTTGAGGACCACAAGTGGTACCCTTGCGGCGAGAAC-AGCTTCATTTACTTCTCGTTCGACAGCGACCGCAACGGTCTGATGTTGAAGCACGGGGAC-GC--TGCGTAAG--TTTCCCTCT-GA-T--TTCGAAATACTTTGTAGG-TTCC-GATTTACTAACATG-----TTCTTT-AGCTCTCCCTATGTCGGTACCACCACCCTTCCCAACTACTGCCGTGCCGGCGGCAATGGCCCTCAGGACTTCGTCTGCCAGGGTGTTTCT Embellisia_proteae TTCTTTCCTCGCCGCCGCC---GGCCTTGCTGCCGCCGCGCCGCTTGAGTCTCGCCAGGACGCCTCAACCTGCCCTGTTGCCACCCAGGGTGACTATGTCTGGAAGATCTCTGGGTTCTACGCACGCAAGCCTCAGGGATCCTACTTGAACAGCGTGGGCTTCAACATCAAGACCACCAACGGAGGAACTCTCGACTTCAACTGCGGCGCTTCGGCAGACAGGCTTGAGGACCACAAGTGGTACCCTTGCGCCGAGAAC-AGCTTTATATACTTCACTTTCGACAGTGAATACAACGGTCTGCTCCTTAGGCACGGGCAAGGCATCGAGTAAG--TTTTCCTCT-GA-T--TCCGAAACACTTCTTATG-TTTCA-ATTTACTAACATGCTCTTTACAGT-AGCGACGCCGCTATCGGTAGCGCCACCCTTCCCAACTACTGCCGTGCCGGCGGTAATGGCCCCAGGGACTACGTCTGCCAGGGTGTCTCT Embellisia_hyacinthi TTCTCTCCTCGCCGCCGCT---GGCTTTGCTGCCGCCGCGCCGCTTGAGGCTCGCCAGGACGCCTCAT---GCCCTGTCGCCACCCAGGGTGACTATGTCTGGAAGGTCTCTGGATTCAACGCACGCAAGCCTCAGGGATCCTACTTGAACAGGGTGAGCTTCAACATCAAGGCCACCAACGGAGGAACTCTCGACTTCAACTGCGGCGCTTCGGCAGACAAGCTTGACGACCACAAGTGGTACCCTTGCTCCGAGAAC-AGCTTCATATACTTCACTTTCGACAGTCAATACAACGCTCTACTCCTTAGGCACGGGCAAGGCATTGAGTAAG--TTTCCCTCT-GA-T--TTCGAAATACTTCTTATG-TTTC-GATTTACTAACATGCTCTTTACAGT-AGCGACGCCACTATCGGTAGCGCCACCCTTCCCAACTACTGCCGTGCCGGCGGCAATGGCCCCAACGACTTTGTCTGCCAGGGTGTCTCC Embellisia_novae_zelandiae CTCTCTCCTCGCCGCCGCT---GGCCTTGCTGCCGCCGCGCCGCTTGAGGCTCGCCAGGACGCCTCAT---GCCCTGTCACCACCGAGGGTGACTATGTCTGGAAGATCTCTGGATTCTACGCACGCAAGCCTCAGGGATCCTACTTGAACAGCGTGGGCTTCAACATCAAGACCACCAACGGAGGAACTCTCGACTTCAACTGCGGCGCTTCGGCAGACAGGCTTGACGACCACAAGTGGTACCCTTGCGCCGAGAAC-AGCTTCATATACTTCACTTTCGACAGCGAATACAACGGTCTGCTCCTTAGGCACGGGCAAGGTATTGAGTAAG--TTTCCCTCT-GA-T--TTCAAAACACTTCTTATG-TTTCA-ATTTGCTAACATGCTCTTTACAGT-AGCGACGCCACTATCGGTAGCGCCACCCTTCCCAACTACTGCCGTGCCGGCGGCAATGGCCCCAGGGACTACGTCTGCCAGGGTGTCTCC Ulocladium_oudemansii TTCTCTCCTCGCCGCCGCTGCTGGCCTTGTCAGCGCCGCTCCCCTCGAGTCCCGCCAGGACAACGCATCCTGCCCAGTTTCCACCGAGGGTGACTACGTCTGGAAGATCTCTGAGTTCTACGGACGCAAGCCTGAGGGAACCTACTACAACAGCCTAGGCTTCAACATCAAAGCTACCAACGGAGGTACTCTCGACTTCACCTGCTCCGCTCAGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGAGCTTCTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTGAAGCAGGGAGTCAGCGACGAGTAAG--TTTTCCCCGA-ACT--TTCCAA-CGCTTTGCATT-TT-CAGACACACTAACA-----TTTTCCGC-AGCATCACCTACGTTGGTACCACCACTCTTCCTAACTACTGCCGCGCGGGCGGCAACGGCCCCCAGGACTTCGTCTGCCAGGGTGTCTCC Ulocladium_alternariae CTCTCTCCTCGCCGCCGCTGCTGGCCTTGTCAGCGCCGCTCCCCTCGAGTCCCGCCAGGACAACGCATCCTGCCCAGTTTCCACCGAGGGTGACTACGTCTGGAAGATCTCTGAGTTCTACGGACGCAAGCCTGAGGGAACCTACTACAACAGCCTAGGCTTCAACATCAAAGCTACCAACGGAGGTACTCTCGACTTCACCTGCTCCGCTCAGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGAGCTTCTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTGAAGCAGGGAGTCAGCGACGAGTAAG--TTTTCCCCGA-ACT--TTCCAA-CGCTGTGCATT-TT-CAGACACACTAACA-----TTTTCCGC-AGCATCGCCTACGTTGGTACCACCACTCTTCCTAACTACTGCCGCGCGGGCGGCAACGGCCCCCAGGACTTCGTCTGCCAGGGTGTCTCC Embellisia_thlaspi TTCTCTCTTCGCCGCCGCC---GGCATTGTCAGCGCCTCCCCCCTCGAGTCTCGCCAGGACAATGCATCCTGCCCAGTTTCCACCCAGGGCGACTACATCTGGAAGATTTCTAAGTTCTACGGACGCAAGCCTGAGGGCACCTACTACAACAGCCTAGGCTTCAACATCAAGGCCACTAACGCAGGTACTCTCGACTTTAATTGTTCTACTCAGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-ACCCTTCTAGACTTCTCTTTTGACAGCGACCGCAACGGTTTGCTCCTGAGGCAGAAGGTCAACGACGAGTAAG--TTTTCTCC-AGACT--TTCGAA-TACTTCGCATG-TT-CACATATACTGACA-----TTTTCCAC-AGCATCACCGTGATCGCTACCACTACTCTTCCCAACTACTGCCGTGCTGGCGGCAACGGCATCAATGACTTCGTCTGCCAAGGTGTTTCC Embellisia_allii TTCTCTGCTCACCGCCGCTGCCGGCATTGTGAACGCCGCACCCCTTGAGGCACGTCAGGACACCGCATCATGCCCAGTCTCCACTACGGGTGACTACATCTGGAAGATTTCCGAGTTCTATGGCCGCAAGCCTGAAGGAACCTACTACAACAGCATTGGATTCAACATTAAGGCTACCAATGGAGGTGCTCTCGACTTCACCTGCTCTGCTCGAGCCGACAAACTTGAGGACAACAAGTTCTACTCTTGCGGCGAGAAC-AGCTTCATAAGCTTCGCTTTCTCGAGCGATCGCAACGGTCTCTTCCTGAAGCAGGGAGATGGCGGCGCGTAAG--TTCTTCC---------TCCGAA-TGTATCGCTTG-TT-CAGAAATACTAACA-----TCTTTTAC-AGCATCACCTATGTCGCTACCACCACTCTTCCCAACTACTGCCGCGCCGGTGGTAACGGTCCCCAGGACTTTGTCTGCCAGGGTGTCGCC Embellisia_telluster TTCTCTCCTCGCCGCCGCTGCCGGCATTGTGAGCGCCGCACCCCTTGAGGCACGTCAGGACACCGCATCGTGCCCAGTCTCCACTACGGGTGACTACATCTGGAAGATTTCCGAGTTCTATGGCCGCAAGCCTGAAGGAACCTACTACAACAGCATTGGATTCAACATTAAGGCTACCAATGGAGGTGCTCTCGACTTCACCTGCTCTGCTCAAGCCGACAAACTTGAGGACAACAAGTTCTACTCTTGCGGCGAGAAC-AGCTTCATAAGCTTCACTTTCTCGAGCGATCGCAATGGTCTCTTCCTGAAGCAGGGAGACGGCAGCGCGTAAG--TTTTCCCCCAATCT--TCCGGA-CATATCGTTTC-TT-CAGAAATACTAACA-----CCTTCTAC-AGCATCACCTACGTCGCTACCACCACTCTTCCCAACTACTGCCGCGCCGGTGGTAACGGTCCCCAGGACTTTGTCTGCCAGGGTGTCGCC Embellisia_chlamydospora TTCTCTCCTCGCTGCCGCTGCCGGCATTGTGGGCGCCGCACCCCTTGAGGCACGTCAAGACACCGCATCGTGCCCAGTCTCCACTACGGGTGACTACATCTGGAAGATTTCCGAGTTCTATGGCCGCAAGCCTGAGGGAACCTACTACAACAGCATTGGATTCAACATTAAGGCTACCAATGGAGGCACTCTCGACTTCACCTGCTCTGCTCGAGCCGACAAACTTGAGGACAACAAGTTCTACTCTTGCGGCGAGAAT-AGCTTCATAAGCTTCGCTTTCTCGAGCGATCGCAACGGTCTCTTCCTGAAGCAGGGAGATGGCGGCGCGTAAG--TTCTTCC---------TCCGAA-TATGTCGCTTG-TT-CAGAAATACTAACA-----TCTTCTAC-AGCGTCACCTATGTCGCTACCACCACTCTTCCCAACTACTGCCGCGCCGGTGGTAACGGTCCCCAGGACTTTGTCTGCCAGGGTGTCGCC Nimbya_scirpicola CTCTCTCCTTGCCGCTGCCGCTGGCCTTGCCAGTGCCGCACCCCTCGAGGCTCGTGAGACCACTACAACCTGCCCCGTTTCCACTGAGGGTGACTACATTTGGAAGATCTCCGAATTCTACGGACGCAAGCCTGAGGGAACCTACTACAACAGCTTAGGCTTCAACATCAAGGCCACCAATAACGGCACTCTCGACTTCACATGCTCGACTTCCGCCGACAAGCTTGAGGACAACAAGTACTACTCTTGCGGCACGAAC-AGCTTCATCAGCTTCGCTTTCTCAAGCGATCGCAATGGTCTTCTCTTGAAGCAGGAAGTTAGCGACGAGTAAG--TTTTTGCCAT-GTT--CTCAGA-CACTGCAACTG-TT-CAGATATGCTAATA-----TATTTCAC-AGCGTCACCTGGGTCGGCACCACCACTCTTCCCAACTACTGCCGCGCTGGCGGCAATGGTCCCCAGGACTTTGTCTGCACGGGTGTCTCT Nimbya_caricis CTCTCTCTTCGCCGCCGCTGCCGGCCTCGCCAGCGCCGCACCCCTTGAGACTCGCCAGACCACCACACCCTGCCCCGTCTCCACCGAGGGTGACTACGTCTGGAAGATCTCCGAATTCTACGGACGCAAGCCTGAGGGAACCTACTACAACAGCCTAGGCTTCAACATCAAGGCTACCAACAACGGCACTCTCGACTTCACCTGCTCTTCTTCAGCCGATAAGCTTGAGGACAACAAGTTCTACTCTTGCGGCGAGAAC-AGCTTCATGAGCTTCGCCTTCTCCAGCGACCGCAACGGTCTGCTCCTCAAGCAGGATGTCAGCGACGCGTAAG--TTTTCCCTACAA-T--CTCGCA-TGCACACTTTG-TT-CAGACATGCTAACT-----TCTTCCAC-AGCATCACCTGGGTCGGAACCACCACTCTTCCCAACTACTGTCGCGCTGGCGGTAACGGTCAGTTGGACTTTGTCTGCCAGGGTGTTTCT Nimbya_scirpovora TTCTCTCGTCGCCGCTACTGCTGGCATTGCCAGCGCCGCACCCCTCGAGGCCCGCCAGACCACTACAACCTGCCCCGTTTCTACTGAGGGTGATTACATCTGGAAGATCTCTGAGTTCTACGGGCGCAAGCCTGAGGGAACCTACTACAACAGTCTAGGCTTCAACATCAAGGCCACCAACAACGGTACTCTCGACTTCACATGCTCCACTTCAGGCGACAAGCTCGAGGATAACAAGTACTACTCTTGCGGCGAGAAC-AGCTTCATTAGCTTCGCCTTCTCAAGCGATCGCAATGGTCTGCTCCTGAAGCAGGAGGTTAGCGACAGGTAAG--TTTTTCC-AC-GTT--CTCATA-CGCACTAATTA-TT-CGGATATGCTAACA-----TACTCCAC-AGCATCACCTTCGTCGGAACCACCACTCTCCCCAACTACTGCCGTGCTGGCGGCAATGGTCCCTTGGACTATGTCTGCACGGGTGTATCT Nimbya_scirpinfestans TTCTCTCCTCGCCGCTACTGCAGGCATTGCCAGCGCCGCACCCCTCGAGGCCCGAGAGACCACTACAACCTGCCCCGTTTCTACTGAGGGTGATTACATCTGGAAAATCTCTGAGTTCTCCGGACGCAAGCCTGAGGGAACCTACTACAACAGTCTAGGCTTCAACATCAAGGCTACCAACAACGGTACTCTCGACTTCACGTGCTCCACTTCAGGCGACAAGCTCGAGGACAACAAGTACTACTCTTGCGGCGAGAAC-AGCTTCATTAGCTTCGCCTTCTCAAGCGATCGCAATGGTCTGCTCCTGAAGCAGGAGGTTAGCGACAGGTAAG--TTTT-GCCAC-GTT--CTCATA-CGCACTAATTA-TT-CGGACATGCTAACA-----TACTCCAT-AGCATCACCTTCGTCGGAACCACCACTCTCCCCAACTACTGCCGTGCTGGCGGCAATGGGCCGTTGGACTATGTGTGCACGGGTGTATCT Embellisia_phragmospora TGCTCTCGTCGCCGCCGCC---GGCATTGTCAGCGCCTCCCCCCTCGAGTCTCGCCAGGACAATGCATCCTGCCCAGTTTCCACCCAGGGCGACTACATCTGGAAGATTTCTAAGTTCTACGGACGCAAGCCTGAGGGCACCTACTACAACAGCCTAGGCTTCAACATCAAGGCCACTAACGCAGGTACTCTCGACTTTAATTGTTCTACTCAGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-ACCCTTCTAGACTTCTCTTTTGACAGCGACCGCAACGGTTTGCTCCTGAGGCAGAAGGTCAACGACGAGTAAG--TTTTCTCCA-GACT--TTCGAA-TACTTCGCATG-TT-CACATATACTGACA-----TTTTCCAC-AGCATCACCGTGATCGCTACCACTACTCTTCCCAACTACTGCCGTGCTGGCGGCAACGGCATCAATGACTTCGTCTGCCAGGGCGCAGCC Embellisia_didymospora TTCTCTTCTCGCCGCCGCTGCTGGCGTTGTCAGTGCCGCACCCCTCGAGTCCCGCCAGGACAACGCAACTTGCCCAGTTTCCACCGAGGGCGATTACGTTTGGAAAATTTCTGAATTCTTCGGACGCAAGCCTGAAGGCACCTACTACAACAGCATTGGCTTCAACATCGAGGCTACCAACGGAGGTACTCTCGACTTCACATGCTCTGCTCAAGCCGACAAGCTTGAGGACAAGAAGTTCTACTCTTGCGGTGAGAAC-AGCTTTATGAGCTTCTCTTTCTCGAGCGACCGCAACGGTCTGCTCCTGAAGCAGGAGGTCAGCGACGAGTAAG--TCTTCTTCA-CACT--TTCAAA-TGTATGGCTTG-CT-CAGATATGCTAACA-----TTTTCCAC-AGCATCACCTACGTCGCTACCACCACTCTTCCCAACTACTGCCGCGCCGGTGGTAACGGTCCCCAGGACTTTGTCTGCCAGGGAGTCTCT Ulocladium_consortiale CTCTCTTTTCGCCGCCGCT---GGCCTTGCCGCCGCCGCTCCCCTTGAGTCTCGCCAGGACACTGCATCCTGCCCTGTCTCCACCCAGGGTGACTACGTCTGGAAGATCTCTGAGTTCTACGGACGCAAGCCTGAGGGAACCTACTACAACAGCCTAGGCTTCAACATCAAGGCCACCAACGGAGGAACCCTCGACTTCACCTGCTCTGCTCAGGCGGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTTTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTGAAGCAGAAGGTTAGCGACGAGTAAG--TTTGCCCCA-TATT--CTCGAA-TACTCCACATC-TT-CAGATGTACTAACA-----TTTCACTC-AGCATCACCTATGTCGCTACCACCACTCTTCCTAACTACTGCCGCGCTGGCGGTAACGGCCCCAAGGACTTCGTCTGCCAGGGCGTCTCC Ulocladium_atrum CTCTCTCTTCGCCGCCGCC---GGCCTTGCCGCCGCCGCTCCCCTTGAGTCTCGCCAGGACACTGCATCCTGCCCTGTCTCCACCCAGGGTGACTACGTCTGGAAGATCTCTGAGTTCTACGGACGCAAGCCTGAGGGAACCTACTACAACAGCCTAGGCTTCAACATCAAGGCCACCAACGGAGGAACCCTCGACTTCACCTGCTCTGCTCAGGCGGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTTTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTGAAGCAGAAGGTCAGCGACGAGTAAG--TTTCCCCCA-TACT--CTCGAA-TACTCCTCATC-TT-CAGATGTACTAACT-----TTTCCTTC-AGCATCACCTATGTCGCTACCACCACTCTTCCTAACTACTGCCGCGCTGGCGGTAACGGCCCCAAGGACTTCGTCTGCCAGGGCGTCTCC Ulocladium_botrytis CTCTCTCTTCGCCGCCGCC---GGCCTTGCCGCCGCCGCTCCCCTTGAGTCTCGCCAGGACACTGCATCCTGCCCTGTCTCCACCCAGGGTGACTACGTCTGGAAGATCTCTGAGTTCTACGGACGCAAGCCTGAGGGAACCTACTACAACAGCCTAGGGTTCAACATCAAGGCCACCAACGGAGGAACCCTCGACTTCACCTGCTCTGCTCAGGCGGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTTTCTTTTGACAGCGACCGCAGCGGTCTGCTCCTGAAGCAGAAGGTCAGCGACGAGTAAG--TTTCCCCCA-TACT--CTCGAA-TACTCCTCATC-TT-CAGATGTACTAACT-----TTTCCTTC-AGCATCACCTATGTCGCTACCACCACTCTTCCTAACTACTGCCGCGCTGGCGGTAACGGCCCCAAAGACTTCGTCTGCCAGGGCGTCTCC Ulocladium_chartarum CTCTCTCTTCGCCGCCGCT---GGCCTTGCCGCTGCCGCTCCCCTCGAGTCTCGCCAGGACAACGCATCCTGCCCTGTCACTACCGAGGGTGACTACATCTGGAAGATCTCTGAGTTCTACGGACGCAAGCCTGAGGGAACCTACTACAACAGCCTAGGCTTCAACATCAAGGCCACCAACGGAGGAACCCTCGACTTCACCTGCTCTGCTCAGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTCTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTCAAGCAGAAGGTCAGCGACGAGTAAG--TTTTCTCCA-GACT--CTAGAA-CACTTCGCATT-TT-CAGATATGCTAACA-----TTTTCCTC-AGCATCACCTACGTCGCTACCACCACTCTTCCCAACTACTGCCGCGCCGGCGGTAACGGCCCTAACGACTTCGTCTGCAACGGTGTCTCC Ulocladium_septosporum TTCTCTCTTCGCCGCCGCT---GGCCTTGCCGCTGCCGCTCCCCTCGAGTCTCGCCAGGACAACGCATCCTGCCCTGTCACTACCGAGGGTGACTACATCTGGAAGATCTCCGAGTTCTACGGACGCAAGCCTGAGGGAACCTACTACAACAGCCTAGGCTTCAACATCAAGGCCACCAACGGAGGAACCCTCGACTTCACCTGCTCTGCTCAGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTCTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTCAAGCAGAAGGTCAGCGACGAGTAAG--TTTTCTCCA-GACT--CTAGAA-CACTTCGCATT-TT-CAGATATGCTAACA-----TTTTCCTC-AGCATCACCTACGTCGCTACCACCACTCTTCCCAACTACTGCCGCGCCGGCGGTAACGGCCCTAACGACTTCGTCTGCAACGGTGTCTCC Ulocladium_obovoideum TTCTCTCTTCGCCGCCGCC---GGCCTTGCCGCCGCCGCTCCCCTTGAGTCTCGCCAGGACACTGCATCCTGCCCTGTCTCCACCCAGGGTGACTACGTCTGGAAGATCTCTGAGTTCTACGGACGCAAGCCTGAGGGAACCTACTACAACAGCCTAGGGTTCAACATCAAGGCCACCAACGGAGGAACCCTCGACTTCACCTGCTCTGCTCAGGCGGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTTTCTTTTGACAGCGACCGCAGCGGTCTGCTCCTGAAGCAGAAGGTCAGCGACGAGTAAG--TTTCCCCCA-TACT--CTCGAA-TACTCCTCATC-TT-CAGATGTACTAACT-----TTTCCTTC-AGCATCACCTATGTCGCTACCACCACTCTTCCTAACTACTGCCGCGCTGGCGGTAACGGCCCCAAAGACTTCGTCTGCCAGGGCGTCTCC Embellisia_indefessa CTCTCTCTTCGCCGCCGTT---GGCCTTGCCGCCGCCGCTCCCCTCGAGTCTCGCCAGGACAACGCATCCTGCCCTGTCACCACCGAGGGTGACTACGTCTGGAAGATCTCTGAGTTCAGCGGACGCAAGCCTGAGGGAACCTACTACAACAGCCTAAGCTTCAACATCAAGGCCACCAACGGAGGAACCCTCGACTTTTCCTGCTCTGCTCAGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGGAC-AGCTTCATGAGCTTCTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTCAAGCAGGAGGTCAGCGATGAGTAAG--TTTTCCCCA-GACT--CTAGAA-CACTTCGCATG-TT-CAGATATGCTAACA-----TTTTCCTC-AGCATCACCTACGTCGCTACCACCACTCTTCCCAACTACTGCCGCGCCGGCGGTAACGGCCCCAACGACTTCGTCTGCAGCGGTGTATCC Alternaria_cheiranthi CTCTCTCTTCGCCGCCGCT---GGCCTTGCCGCCGCCGCTCCCCTCGAGTCTCGCCAGGACAACGCATCCTGTCCTGTCTCCACCGAGGGTGACTACGTCTGGAAGATCTCTGAGTTCTACGGACGCAAGCCTGAGGGAACATACTACAACAGCCTAGGTTTCAACATCAAGGCCACCAACGGAGGAACCCTCGACTTCACCTGCTCTGCTCAGGCCGATAAGCTTGAGGATCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGAACTTCTCTTTCGACAGCGACCGCAGCGGTCTCCTCCTCAAGCAGAAGGTTAGCGACGAGTAAG--TTTGCCCCA-GACT--CTAGAA-CACTTCTCATT-TT-CAGATATGCTAACA-----TTTCCCTC-AGCATCACCTACGTCGCTACCACCACTCTTCCCAACTACTGCCGCGCCGGCGGCAACGGCCCCAACGACTTCGTCTGCAACGGTGTCTCC Alternaria_mimicula CTCTCTCTTCGCCGCCGCT---GGCCTTGCTGCCGCCGCTCCTCTTGAGACTCGCCAGGACAACGCATCCTGCCCTGTCTCCACAAAGGGTGACTACGTCTGGAAGATCTCCGAATTCTACGGACGCAAGCCTGAGGGATCCTACTACAACAACCTCGGCTTCAACATCAAGGCTACCAACGGCGGCACCCTCGACTTCACCTGCTCTGCTCGGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTCTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTAAGGCAGAAGGTCGACGACGAGTAAG--T--CCCCTA-CACC--GGCGAG-TGCTTCTCATCTTT-TACATATACTAACA-----TCTC-TTC-AGCACCACCTATGTCGCTACCGCCACTCTTCCCAACTACTGCCACGCCGGCGGTAACGGTGCCAACGACTTCGTCTGCCAGGGTGTCTCC Embellisia_conoidea TTCTCTCTTCGCCGCCGCT---GGCCTTGCTGCCGCCGCTCCTCTTGAGACTCGCCAGGACAACGCATCCTGCCCTGTCTCCACCAAGGGTGACTACGTCTGGAAGATCTCCGAGTTCTACGGACGCAAGCCTGAGGGATCCTACTACAACAGCCTCGGCTTCAACATCAAGGCTACCAACGGCGGCACCCTCGACTTCACCTGCTCTGCTCAGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTCTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTAAGGCAGAAGGTCGACGACGAGTAAG--T--CCCCTA-CACC--GGCGAG-TGCTTCTCATCTTT-TACATATACTAACA-----TCTC-TTC-AGCACCACCTATGTCGCTACCGCCACTCTTCCCAACTACTGCCGCGCCGGCGGTAACGGTGCCAACGACTTCGTCTGCCAGGGTGTCTCC Alternaria_brassicicola CTCTCTCTTCGCCGCCGCT---GGCCTTGCTGCCGCCGCTCCTCTTGAGACTCGCCAGGACAACGCATCCTGCCCTGTCTCCACAAAGGGTGACTACGTCTGGAAGATCTCCGAATTCTACGGACGCAAGCCTGAGGGATCCTACTACAACAACCTCGGCTTCAACATCAAGGCTACCAACGGCGGCACCCTCGACTTCACCTGCTCTGCTCGGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTCTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTAAGGCAGAAGGTCGACGACGAGTAAG--T--CCCCTA-CACC--GGCGAG-TGCTTCTCATCTTT-TACATATACTAACA-----TCTC-TTC-AGCACCACCTATGTCGCTACCGCCACTCTTCCCAACTACTGCCACGCCGGCGGTAACGGTGCCAACGACTTCGTCTGCCAGGGTGTCTCC Alternaria_sonchi CTCTCTCTTCGCCGCCGCT---GGCCTTGCCGCCGCTGCTCCTTTCGAGGCCCGCCAGGGCAACGCATCCTGCCCTGTCTCCACCCAGGGTGACTACGTCTGGAAGATCTCCGAGTTCTACGGACGCCAGCCCGAAGGAACCTACTACAACAGCCTCGCCTTCAACATCAAGGCCACCAACGGAGGAACCCTCGATTTCACCTGCTCTGCTTCGGCCGACAAGCTTGAGGATGGCAAGTGGTACCCTTGCGACAAGGAC-AACTTCATGGAGTTCTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTGAAGCAGAAGGTCAGCGACGAGTAAG--TTATCCTCA-TGCC--TGTCAC-TACTCTATACA-TT-CTGATATACTAACA-----TCTC-TTC-AGCATCATCTATTTCGCTACCGCCACTCTTCCCAACTACTGCCACGCCGGCGGTAACGGCCCTCAGGACTTTGTCTGCCAGGGTGTCTCC Alternaria_cinerariae CTCTCTCTTCGCCGCCGCT---GGCCTTGCCGCCGCTGCTCCTCTCGAGTCTCGCCAGGACAACGCATCCTGCCCTGTCACCACCCAGGGTGACTACGTCTGGAAGATCTCCGAGTTCTACGGACGCAAGCCCGAGGGAACCTACTACAACAGCCTCGGCTTCAACATCAAGGCCACCAACGGAGGAACCCTCGATTTCACCTGCTCTGCTTCGGCCGACAAGCTTGAGGACGGCAAGTGGTACCCTTGCGACAAGGAC-AACTTCATGGAGTTCTCTTTCGACAGTGACCGCAGCGGTCTGCTCCTGAAGCAGAAGGTCAGCGACGAGTAAG--TTATCCTCA-GGCA--TGTCAC-CACTCTATACA-TT-CAGATATACTAACA-----TTTC-TTC-AGCATCACCTACGTCGCTACCGCCACTCTTCCCAACTACTGCCGCGCCGGCGGTAACGGCCCTAAGGACTTTGTCTGCCAGGGTGTTTCC Alternaria_carotiincultae CTCTCTCTTCGCCGCCGCT---GGCCTTGCCGCCGCCGCTCCCCTCGAGTCCCGCCAGGACAACGCTTCCTGCCCTGTCGCTACCGAGGGTGACTACGTCTGGAAGATCTCCGAGTTCTACGGACGCCAGCCTGAGGGAACCTACTACAACAGCATCGGCTTCAACATCAAGGCCACCAACGGCGGAACCCTCGACTTCACTTGCTCTGCTTATGCCGACAAGCTCGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTCTCCTTCGACAGCGACCGCAAAGGTCTGCTCTTCAAGCAGAACGTCAGCAACGAGTAAGTCTTATCC--A-AACC--T-TGAA-TAA-TC-CACATTTACAGATATACTAACA-----TTTCTCTTTAGCACCACCTATGTCGCTACTACAACCATTCCTAGCTACTGCCGCGCCGCTGGTAACGGCCCCAAGGACTACGTCTGCCAGGGTGTGTCT Alternaria_radicina TTCTCTCTTCGCCGCCGCT---GGCCTTGCCGCCGCCGCTCCTCTCGAGTCCCGCCAGGACAACGCTTCCTGCCCTGTCGCTACCGAGGGTGACTACGTCTGGAAGATCTCCGAGTTCTACGGACGCCAGCCTGAGGGAACCTACTACAACAGCATCGGCTTCAACATCAAGGCCACCAACGGCGGAACCCTCGACTTCACCTGCTCTGCTTATGCCGACAAGCTCGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTCTCCTTCGACAGCGACCGCAAAGGTCTGCTCTTCAAGCAGAACGTCAGCAACGAGTAAGTCTTATCC--A-AACC--T-TGAA-AAA-TC-CACATTTACAGATATACTAACA-----TTTCTCTTTAGCACCACCTATGTCGCCACTACAACCATTCCTAGCTACTGCCGCGCCGGCGGTAACGGCCCCAAGGACTTTGTCTGCCAGGGTGTGTCC Alternaria_smyrnii CTCTCTCTTTGCCGCCGCT---GGCCTTGCCGCCGCCGCTCCCCTCGAGTCTCGCCAGGACAACGCTTCCTGCCCTGTCGCTACCCAGGGTGACTACGTCTGGAAGGTCTCCGAGTTCTACGGACGCCAGCCTGAGGGAACCTACTACAACAGCATCAGCTTCAACGTCAAGGCCACCAATGGCGGAACTCTCGACTACACTTGCTCTTCATCTGCCGACAAGCTCGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCCTCATGGACTTCTCCTTCGACAGCGACCGCAAAGGTCTGCTCTTCAAGCAGAAGGTCAGCGACGAGTAAGTCTTATCC--A-AAGT--T-TGAA-CAA-TC-CACAGTTGCAGATATACTGACA-----TTTCTCTTTAGCACCACCTACGTCGCTACCACGACCATTCCCAGCTACTGCCGCGCCGGTGGTAACGGCCCTAAGGACTTTGTCTGCCAGGGTGTGTCT Alternaria_selini CTCTCTCTTCGCCGCCGCT---GGCCTTGCCGCCGCCGCTCCCCTCGAGTCTCGCCAGGACAACGCTTCCTGCCCTGTCGCTACCCAGGGTGACTACGTCTGGAAGGTCTCCGAGTTCTACGGACGCCAGCCTGAGGGAACCTACTACAACAGCATCAGCTTCAACGTCAAGGCCACCAATGGCGGAACTCTTGACTACACCTGCTCTTCATCTGCCGACAAGCTCGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCCTCATGGACTTCTCCTTCGACAGCGACCGCAAAGGTCTGCTCTTCAAGCAGAAGGTCAGCGACGAGTAAGTCTTATCC--A-AAGT--T-TGAA-CAA-TC-CACATTTGCAGATATACTAACA-----TTTCTCTTTAGCACCACCTATGTCGCTACCACAACCATTCCCAGCTACTGCCGCGCCGGCGGTAATGGCCCTAAGGACTTTGTCTGCCAGGGTGTGTCT Alternaria_petroselini CTCTCTCTTCGCCGCCGCT---GGCCTTGCCGCCGCCGCTCCCCTCGAGTCTCGCCAGGACAACGCTTCCTGCCCTGTCGCTACCCAGGGTGACTACGTCTGGAAGGTCTCCGAGTTCTACGGACGCCAGCCTGAGGGAACCTACTACAACAGCATCAGCTTCAACGTCAAGGCCACCAATGGCGGAACTCTTGACTACACCTGCTCTTCATCTGCCGACAAGCTCGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCCTCATGGACTTCTCCTTCGACAGCGACCGCAAAGGTCTGCTCTTCAAGCAGAAGGTCAGCGACGAGTAAGTCTTATCC--A-AAGT--T-TGAA-CAA-TC-CACATTTGCAGATATACTAACA-----TTTCTCTTTAGCACCACCTATGTCGCTACCACAACCATTCCCAGCTACTGCCGCGCCGGCGGTAATGGCCCTAAGGACTTTGTCTGCCAGGGTGTGTCT Alternaria_solani CTCTCTCTTCGCCGCCGCC---GGCCTTGCTGCCGCTGCTCCTCTCGAGACTCGCCAGGACACCGCATCCTGCCCCGTCTCCACCCAGGGTGACTACGTCTGGAAGATCTCCGAGTTCTACGGACGCAAGCCCGAGGGAACCTACTACAACAGCCTCGGCTTCAACATCAAGGCCACCAACGGAGGAACTCTCGACTTCACCTGCTCTGCCTCGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTCTCTTTCGACAGCGACCGCAGCGGCCTGCTCCTGAAGCAGAAGGTCAGCGACGAGTAAG--TTGCCCCCG-CGCT--TTTCAC-TACCTTTTACA-TT-CAGATATACTAACG-----CTTTTCC--AGCATCACCTACGTCGCCACCACCACTCTTCCCAACTACTGCCGCGCTGGCGGTAACGGCCCCAAGGACTTTGTCTGCACTGGTGTCTCT Alternaria_porri CTCTCTCTTCGCCGCCGCC---GGCCTTGCTGCCGCTGCTCCTCTCGAGACTCGCCAGGACACCGCATCCTGCCCCGTCTCCACCCAGGGTGACTACGTCTGGAAGATCTCCGAGTTCTACGGACGCAAGCCCGAGGGAACCTACTACAACAGCCTCGGCTTCAACATCAAGGCCACCAACGGAGGAACTCTCGACTTCACCTGCTCTGCCTCGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTCTCTTTCGACAGCGACCGCAGCGGCCTGCTCCTGAAGCAGAAGGTCAGCGACGAGTAAG--TTGCCCCCG-CGCT--TTTCAC-TACCTTTTACA-TT-CAGATATACTAACG-----CCTTTCC--AGCATCACCTACGTCGCCAACACCACTCTTCCCAACTACTGCCACGCTGGCGGTAACGGCCCCAAGAACTTTGCCTGCACTGGTGTCTCT Alternaria_dauci CTCTCTCTTCGCCGCCGCC---GGCCTTGCTGCCGCTGCTCCTCTCGAGACTCGCCAGGACACCGCGTCCTGCCCCGTCTCCACCCAGGGTGACTACGTCTGGAAGATCTCCGAGTTCTACGGACGCAAGCCTGAGGGAACCTACTACAACAGCCTCGGCTTCAACATCAAGGCCACCAACGGAGGAACTCTCGACTTCACCTGCTCTGCCTTGGCCGACAAGCTTGAGGATCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTCTCTTTCGACAGCGACCGCAGCGGCCTGCTCCTGAGGCAGAAGGTCAGCGACGAGTAAG--TTGCCCTCG-TGCT--TTTCAC-TACCTTTTACA-TT-GAGATATACTAACT-----CTTTTCC--AGCATCACCTACGTCGCCACCACCACTCTCCCCAACTACTGCCGCGCTGGCGGTAACGGTCCCAAGGACTATGTCTGCAATGGTGTCTCT Alternaria_tagetica CTCTCTCTTCGCCGCCGCC---GGCCTTGCTGCCGCTGCTCCTCTCGAGACTCGCCAGGACACCGCATCCTGCCCCGTCTCCACCCAAGGTGACTACGTCTGGAAGATCTCCGAGTTCTACGGACGCAAGCCTGAGGGAACCTACTACAACAGCCTCGGCTTCAACATCAAGGCCACTAACGGAGGAACTCTCGACTTCACCTGCTCTGCCTCGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTCTCTTTCGACAGCGACCGCAGCGGCCTGCTCCTGAGGCAGAAGGTCAGCGACGAGTAAG--TTGCCCTCG-CGCT--TTTGAC-TACTTTTTACA-TT-CAGATATACTAACT-----CTTTTCC--AGCATCACCTACGTCGCCACCACCACTCTCCCCAACTACTGCCGCGCTGGCGGTAACGGTCCCAAGGACTTTGTCTGCACCGGTGTCTCT Alternaria_macrospora CTCTCTCTTCGCCGCCGCC---GGCCTTGCTGCCGCTGCTCCTCTCGAGACTCGCCAGGACACCGCATCCTGCCCCGTCTCCACCCAGGGTGACTACGTCTGGAAGATCTCCGAGTTCTACGGACGCAAGCCCGAGGGCACCTACTACAACAGCCTCGGCTTCAACATCAAGGCCACCAACGGAGGAACTCTCGACTTCACCTGCTCTGCCTCGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGACGAGAAC-AGCTTCATGGACTTTTCTTTCGACAGCGACCGCAGCGGCCTGCTCCTGAGGCATAAGGTCAGCGACGAGTAAG--TTGCCCCCG-CGCT--TTTCAC-TACCTTTTATA-TT-CAGATATACTAACT-----TC--TGCCTAGCATCACCTACGTCGCCACCGCCACTCTTCCCAACTACTGCCGCGCTGGTGGTAACGGTCCCAAGGACTTTGTCTGCACTGGTGTCTCT Alternaria_pseudorostrata TTCTCTCTTCGCCGCCGCC---GGCCTTGCTGCCGCTGCTCCTCTCGAGGCTCGCCAGAACACCGCAACCTGCCCCGTCTCCACCCAGGGTGACTACGTCTGGAAGCTCTCTGAGTTCTACGGACGCAAGCCCCAAGGAACCTACTACAACAGACTCAGCTTCAACATGAAGGCCACCAACGGAGGAACTCTCGACTTCACCTGCTCTGCCGCGGCCGACAAGCTTGAGGACCACAAGTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTCTCTTTCGACAGCGACCGCAGCGGCTTGCTCTTGAGGCAGAAGGTCAGCGACGAGTAAG--TTGCCCTCG-CGCT--TTTCAC-TACCTTTTACA-TT-CAGATATACTAACT-----TC--TGTCCAGCATCACCTACGTCGCCACCACCACTCTTCCCAACTACTGCCGCGCTGGCGGTAACGGCCCCAAGGACTTTGTCTGCACTGGTGTCTCT Nimbya_celosiae TTCCCTCTTCGCCGCCGCT---GGCCTTGCTGCCGCTGCTCCTCTCGAGTCTCGCCAGGACGCCACATCCTGCCCTGTCGCCAAGCAGGGTGACTACGTCTGGAAGATCTCCCAGTTCTTCGGAAACAAGCCTGAGGGAACCTACTTCAACAGCCTCAGCGTCAACATCCAGGCCACCAACGGAGGAACCCTCAACTTCACCTGCTCTGTGCAGGCCGACAAGATTGAAGACCACAAGTACTACTCTTGCGGCGAGAAC-AGCTTCATGGACATCTCTTTCGACAGCGACCGCGACGGTCTGCTCCTGAAGCAGGAGGTTAGCGACGAGTAAGTCCT--CC--A-TA----TTGGAT-TACTTTGTATA-TA-CAGATATACTAATA-----TTTTTCC--AGCACCACCTATGTCGGTACCGTTACTCTTCCCAACTACTGCCGCGCCGGCGGTGGCAACCCGGGCCACTTTGTCTGCGATGGTGTTTCC Nimbya_alternantherae CTCCCTCTTCGCCGCCGCT---GGCCTTGCTGCCGCTGCTCCTCTCGAGTCTCGCCAGGCCGACTCATCCTGCCCTGTCGTCAAGCAGGGTGACTACGTCTGGAAGATCTCCAAGTTCTTCGCAAACAAGCCTGACGGAACCTTCATCAACAGCCTCAGCATCAACATCCGGGCTACCAACGGAGGAACCCTCGACTTCACCTGCTCTGTGCAGGCCGACAAGATTGAAGACCACACGTACTACTCTTGCGGCCAGAAC-ACCTACATGGACATCTCTTTCAACAGCGACCGCAACGGTCTACTCCTGAGGCAGAAGGTTGACGATCAGTAAGTCGT--CCTCA-TATC--TTGGAT-TACTATGTATA-TT-CAGATATACTAACA-----TTTTTCT--AGCACCACCTATATCGGTACCGTTACTCTTCCCAACGTCTGCCGCGCCGGCGGTGGCAACTCGCAACACATGGTTTGCAATGGTGTTTCC Nimbya_perpunctulata_BMP1992 CTCCCTCTTCGCCGCCGCT---GGCCTTGCTGCCGCTGCTCCTCTCGAGTCTCGCCAGGACGCCACATCCTGCCCTGTCGCCAAGCAGGGTGACTACGTCTGGAAGATCTCCCAGTTCTTCGGAAACAAGCCTGAGGGAACCTACTTCAACAGCCTCAGCGTCAACATCCAGGCCACCAACGGAGGAACCCTCAACTTCACCTGCTCTGTGCAGGCCGACAAGATTGAAGACCACAAGTACTACTCTTGCGGCGAGAAC-AGCTTCATGGACATCTCTTTCGACAGCGACCGCGACGGTCTGCTCCTGAAGCAGGAGGTTAGCGACGAGTAAGTCCT--CC--A-TA----TTGGAT-TACTTTGTATA-TA-CAGATATACTAATA-----TTTTTCC--AGCACCACCTATGTCGGTACCGTTACTCTTCCCAACTACTGCCGCGCCGGCGGTGGCAACCCGGGCCACTTTGTCTGCGATGGTGTTTCC Alternaria_longipes CTCTCTCTTCGCCGCCGCT---GGCCTTGCCGCCGCTGCTCCTCTCGAGTCTCGCCAGGACACCGCATCCTGCCCTGTCACTACCGAGGGTGACTATGTCTGGAAGATCTCCGAGTTCTACGGACGCAAGCCGGAGGGAACCTACTACAACAGCCTCGGCTTCAACATCAAGGCTACCAACGGAGGAACACTCGACTTCACCTGTTCTCACTCAGCCGACAAGCTTGAGGACCACACTTGGTACTCTTGCGGCGAGAAC-AGCTTCATGGACTTCTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTGAAGCAGAAGGTTAGCGACGAGTAAG--TTACCCTTG-TACC--TTCGAT-TACTTCGCAGA-TT-CAGATATACTAACA-----CA--TTCCCAGCATCACCTACGTCGCTACCGCCACTCTTCCCAACTACTGCCGCGCTGGCGGTAACGGCCCTAAGGACTTTGTCTGCCAGGGTGTTGCC Alternaria_alternata CTCTCTCTTCGCCGCCGCT---GGCCTTGCCGCTGCTGCTCCTCTCGAGTCTCGCCAGGACACCGCATCCTGCCCTGTCACCACTGAGGGTGACTACGTCTGGAAGATCTCCGAATTCTACGGACGCAAGCCGGAAGGAACCTACTACAACAGCCTCGGCTTCAACATCAAGGCCACCAACGGAGGAACCCTCGACTTCACCTGCTCTGCTCAGGCCGATAAGCTTGAGGACCACAAGTGGTACTCCTGTGGCGAGAAC-AGCTTCATGGACTTCTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTGAAGCAGAAGGTTAGCGACGAGTAAG--TTACCCTTG-TACC--TTCGAT-TACTTCGCAGA-TT-CAGATATACTAACA-----TA--TTCCCAGCATCACCTATGTCGCTACCGCCACTCTTCCCAACTACTGCCGCGCTGGCGGTAACGGCCCTAAGGACTTTGTCTGCCAGGGTGTTGCC Alternaria_limoniasperae CTCTCTCTTCGCCGCCGCT---GGCCTTGCCGCTGCTGCTCCTCTCGAGTCTCGCCAGGACACCGCATCCTGCCCTGTCACCACTGAGGGTGACTACGTCTGGAAGATCTCCGAATTCTACGGACGCAAGCCGGAAGGAACCTACTACAACAGCCTCGGCTTCAACATCAAGGCCACCAACGGAGGAACCCTCGACTTCACCTGCTCTGCTCAGGCCGATAAGCTTGAGGACCACAAGTGGTACTCCTGTGGCGAGAAC-AGCTTCATGGACTTCTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTGAAGCAGAAGGTTAGCGACGAGTAAG--TTACCCTTG-TACA--TTCGAT-TACTTCGCAGA-TT-CAGATATACTAACA-----TA--TTCCCAGCATCACCTATGTCGCTACCGCCACTCTTCCCAACTACTGCCGCGCTGGCGGTAACGGCCCTAAGGACTTTGTCTGCCAGGGTGTTGCC Alternaria_arborescens CTCTCTCTTCGCCGCCGCT---GGCCTTGCCGCTGCTGCTCCTCTCGAGTCTCGCCAGGACACCGCATCCTGCCCTGTCACCACTGAGGGTGACTACGTCTGGAAGATTTCCGAATTCTACGGACGCAAGCCGGAAGGAACCTACTACAACAGCCTCGGCTTCAACATCAAGGCCACCAACGGAGGAACCCTCGACTTCACCTGCTCTGCTCAGGCCGATAAGCTTGAGGACCACAAGTGGTACTCCTGTGGCGAGAAC-AGCTTCATGGACTTCTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTGAAGCAGAAGGTTAGCGACGAGTAAG--TTATCCTTG-TACC--TTCGAT-TACTTCGCAGA-TT-CAGATATACTAACA-----TA--TCCCCAGCATCACCTATGTCGCTACCGCCACTCTTCCCAACTACTGCCGCGCTGGCGGTAACGGCCCCAAGGACTTTGTCTGCCAGGGTGTTGCC Alternaria_tenuissima CTCTCTCTTCGCCGCCGCT---GGCCTTGCCGCTGCTGCTCCTCTCGAGTCTCGCCAGGACACCGCATCCTGCCCTGTCACCACTGAGGGTGACTACGTCTGGAAGATCTCCGAATTCTACGGACGCAAGCCGGAAGGAACCTACTACAACAGCCTCGGCTTCAACATCAAGGCCACCAACGGAGGAACCCTCGACTTCACCTGCTCTGCTCAGGCCGATAAGCTTGAGGACCACAAGTGGTACTCCTGTGGCGAGAAC-AGCTTCATGGACTTCTCTTTCGACAGCGACCGCAGCGGTCTGCTCCTGAAGCAGAAGGTTAGCGACGAGTAAG--TTACCCTTG-TACC--TTCGAT-TACTTCGCAGA-TT-CAGATATACTAACA-----TA--TTCCCAGCATCACCTATGTCGCTACCGCCACTCTTCCCAACTACTGCCGCGCTGGCGGTAACGGCCCTAAGGACTTTGTCTGCCAGGGTGTTGCC ; END; BEGIN MacClade; Version 4.0 87; LastModified -929468141; FileSettings editor '0' '0' '1' '1'; Singles 100; Editor 00011001111111100100010010 '1' '24' Geneva '9' '100' '1' all; EditorPosition '50' '3' '835' '1275'; TreeWindowPosition '46' '6' '835' '1390'; ListWindow Characters closed Geneva '9' '50' '10' '129' '399' 000; ListWindow Taxa closed Geneva '9' '50' '10' '129' '490' 100000000; ListWindow Trees closed Geneva '9' '50' '10' '276' '490'; ListWindow TypeSets closed Geneva '9' '50' '10' '276' 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100010101110011; PairAlign '2' '2' '3' '2' '1' '1' '2' '1' '3' 1010; BothTools '1'; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS; TYPESET * UNTITLED = unord: 1 - 491; END; BEGIN CODONS; CODONPOSSET * UNTITLED = N: 1- 491 ; CODONPOSSET CodonPositions = N: 1- 491 ; CODESET * UNTITLED = universal: 1 - 491; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 491; END; BEGIN TREES; Title 'Trees from "alta1_phylos.tre"'; LINK Taxa = Taxa; TRANSLATE 1 Stemphylium_botryosum, 2 Stemphylium_vesicarium, 3 Stemphylium_callistephi, 4 Pleospora_herbarum_, 5 Alternaria_infectoria, 6 Alternaria_ethzedia, 7 Alternaria_conjuncta, 8 Alternaria_oregonensis, 9 Alternaria_cetera_, 10 Embellisia_abundans_, 11 Crivellia_papaveracea, 12 Brachycladium_papaveris, 13 Undifilum_bornmuelleri, 14 Undifilum_oxytropis_, 15 Embellisia_dennisii_, 16 Embellisia_eureka_, 17 Embellisia_tumida, 18 Embellisia_lolii_, 19 Embellisia_planifunda, 20 Embellisia_proteae, 21 Embellisia_hyacinthi, 22 Embellisia_novae_zelandiae, 23 Ulocladium_oudemansii, 24 Ulocladium_alternariae, 25 Embellisia_thlaspi, 26 Embellisia_allii, 27 Embellisia_telluster, 28 Embellisia_chlamydospora, 29 Nimbya_scirpicola, 30 Nimbya_caricis, 31 Nimbya_scirpovora, 32 Nimbya_scirpinfestans, 33 Embellisia_phragmospora, 34 Embellisia_didymospora, 35 Ulocladium_consortiale, 36 Ulocladium_atrum, 37 Ulocladium_botrytis, 38 Ulocladium_chartarum, 39 Ulocladium_septosporum, 40 Ulocladium_obovoideum, 41 Embellisia_indefessa, 42 Alternaria_cheiranthi, 43 Alternaria_mimicula, 44 Embellisia_conoidea, 45 Alternaria_brassicicola, 46 Alternaria_sonchi, 47 Alternaria_cinerariae, 48 Alternaria_carotiincultae, 49 Alternaria_radicina, 50 Alternaria_smyrnii, 51 Alternaria_selini, 52 Alternaria_petroselini, 53 Alternaria_solani, 54 Alternaria_porri, 55 Alternaria_dauci, 56 Alternaria_tagetica, 57 Alternaria_macrospora, 58 Alternaria_pseudorostrata, 59 Nimbya_celosiae, 60 Nimbya_alternantherae, 61 Nimbya_perpunctulata_BMP1992, 62 Alternaria_longipes, 63 Alternaria_alternata, 64 Alternaria_limoniasperae, 65 Alternaria_arborescens, 66 Alternaria_tenuissima; TREE PAUP_1 = 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((1:40.0,3:16.0):15.0,(2:0.0,4:0.0):5.0,((((((((((5:12.0,(6:0.0,7:0.0):7.0):2.0,8:5.0):25.0,(9:14.0,10:26.0):18.0):21.0,(((26:6.0,28:9.0):5.0,27:8.0):38.0,34:28.0):8.0):7.0,((29:26.0,(31:5.0,32:11.0):26.0):24.0,30:23.0):30.0):20.0,(23:1.0,24:2.0):13.0):4.0,((11:12.0,12:8.0):35.0,(13:49.0,14:33.0):68.0):13.0):12.0,(15:40.0,(25:3.0,33:4.0):41.0):9.0):10.0,((((16:24.0,((43:0.0,45:0.0):5.0,44:1.0):12.0):16.0,((((46:15.0,47:6.0):15.0,(((53:0.0,54:5.0):3.0,(55:7.0,56:5.0):3.0):1.0,(57:9.0,58:16.0):2.0):24.0):8.0,((48:5.0,49:5.0):8.0,(50:7.0,(51:0.0,52:0.0):2.0):13.0):23.0):8.0,(((59:1.0,61:0.0):11.0,60:31.0):41.0,(62:15.0,((63:0.0,64:1.0,66:0.0):0.0,65:4.0):7.0):10.0):7.0):8.0):7.0,(35:6.0,(36:0.0,(37:0.0,40:1.0):3.0):3.0):8.0):5.0,(((38:0.0,39:2.0):6.0,41:13.0):3.0,42:9.0):10.0):6.0):7.0,(((17:0.0,19:0.0):19.0,((20:14.0,22:7.0):5.0,21:11.0):43.0):21.0,18:18.0):14.0):53.0); TREE PAUP_3 = 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(1:21.0,((2:0.0,4:0.0):5.0,3:17.0):4.0,((((((((((5:12.0,(6:0.0,7:0.0):7.0):2.0,8:5.0):25.0,(9:14.0,10:26.0):18.0):21.0,(((26:6.0,28:9.0):5.0,27:8.0):38.0,34:28.0):8.0):7.0,((29:26.0,(31:5.0,32:11.0):26.0):24.0,30:23.0):30.0):20.0,(23:1.0,24:2.0):13.0):4.0,((11:12.0,12:8.0):35.0,(13:49.0,14:33.0):68.0):13.0):12.0,(15:40.0,(25:3.0,33:4.0):41.0):9.0):10.0,((((16:24.0,((43:0.0,45:0.0):5.0,44:1.0):12.0):16.0,((((46:15.0,47:6.0):15.0,((53:0.0,54:5.0):1.0,((55:7.0,56:5.0):2.0,(57:8.0,58:17.0):3.0):3.0):24.0):8.0,((48:5.0,49:5.0):8.0,(50:7.0,(51:0.0,52:0.0):2.0):13.0):23.0):8.0,(((59:1.0,61:0.0):11.0,60:31.0):41.0,(62:15.0,(63:0.0,64:1.0,65:4.0,66:0.0):7.0):10.0):7.0):8.0):7.0,(35:6.0,(36:0.0,(37:0.0,40:1.0):3.0):3.0):8.0):5.0,(((38:0.0,39:2.0):6.0,41:13.0):3.0,42:9.0):10.0):6.0):7.0,(((17:0.0,19:0.0):19.0,((20:14.0,22:7.0):5.0,21:11.0):43.0):21.0,18:18.0):14.0):52.0); TREE PAUP_8 = (1:21.0,((2:0.0,4:0.0):5.0,3:17.0):4.0,((((((((((5:12.0,(6:0.0,7:0.0):7.0):2.0,8:5.0):25.0,(9:14.0,10:26.0):18.0):21.0,(((26:6.0,28:9.0):5.0,27:8.0):38.0,34:28.0):8.0):7.0,((29:26.0,(31:5.0,32:11.0):26.0):24.0,30:23.0):30.0):20.0,(23:1.0,24:2.0):13.0):4.0,((11:12.0,12:8.0):35.0,(13:49.0,14:33.0):68.0):13.0):12.0,(15:40.0,(25:3.0,33:4.0):41.0):9.0):10.0,((((16:24.0,((43:0.0,45:0.0):5.0,44:1.0):12.0):16.0,((((46:15.0,47:6.0):15.0,((53:0.0,54:5.0):1.0,((55:7.0,56:5.0):2.0,(57:8.0,58:17.0):3.0):3.0):24.0):8.0,((48:5.0,49:5.0):8.0,(50:7.0,(51:0.0,52:0.0):2.0):13.0):23.0):8.0,(((59:1.0,61:0.0):11.0,60:31.0):41.0,(62:15.0,((63:0.0,64:1.0,66:0.0):0.0,65:4.0):7.0):10.0):7.0):8.0):7.0,(35:6.0,(36:0.0,(37:0.0,40:1.0):3.0):3.0):8.0):5.0,(((38:0.0,39:2.0):6.0,41:13.0):3.0,42:9.0):10.0):6.0):7.0,(((17:0.0,19:0.0):19.0,((20:14.0,22:7.0):5.0,21:11.0):43.0):21.0,18:18.0):14.0):52.0); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1308081963878; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 2619779891071767652; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 5585308302365652208; mqVersion 273; checksumv 0 2 1966096000 null getNumChars 491 numChars 491 getNumTaxa 66 numTaxa 66 short true bits 15 states 15 sumSquaresStatesOnly 607931.0 sumSquares 607931.0 NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 500; setLocation 954 306; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #2619779891071767652 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 922.1308081910080.3265181946845096018; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 600 433; setLocation 954 306; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #5585308302365652208 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 178; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 600 433; setLocation 954 306; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.chromaseq.ColorQuality.ColorQuality; tell It; toggleAmbiguities on; toggleMarks on; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;