#NEXUS [written Thu Jun 16 13:41:01 EDT 2011 by Mesquite version 2.73 (build 544) at ComPhy.local/10.0.1.3] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=20; TAXLABELS Callithrix_jacchus Canis_familiaris Cynocephalus_variegatus Felis_silvestris Gallus_gallus Gorilla_gorilla Homo_sapiens Hylobates_lar Marmota_monax Mus_musculus Ovis_aritis Pan_troglodytes Pongo_pygmaeus Pteropus_hypomelanus Rattus_norvegicus Serinus_canaria Sus_scrofa Sylvilagus_floridanus Tadarida_brasiliensis Tupaia_glis ; END; BEGIN CHARACTERS; TITLE 'Eutherian c-Myc sequences'; DIMENSIONS NCHAR=1389; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Callithrix_jacchus ATGCCCCTCAACGTCAGCTTCAGC---AACAGGAACTATGACCTCGACTACGACTCGGTGCAGCCGTATTTCTACTGCGACGAGGAAGAG---AACTTCTAC------CAGCAGCAGCAGCAGAGCGAGCTGCAGCCGCCAGCGCCCAGCGAGGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCTCTGTCCCCGAGCCGCCGCTCGGGGCTCTGCTCGACCTCCTGCGTTTCAGTC---ACGCCCTTCTCCCCTCGTGGAGACAACGACGGCGGTGGCGGGAGCTTCTCCACTGCCGACCAGCTGGAGATGGTGACTGAGCTGCTGGGAGGAGACATGGTGAACCAGAGCTTCATCTGCGACCCGGACGACGAGACCTTCATCAAAAACATCATCATCCAGGACTGTATGTGGAGCGGCTTTTCGGCCGCCGCCAAGCTC---------GTCTCAGAGAAGCTGGCCTCCTACCAGGCTGCGCGCAAAGACAGCAGCAGCCCGAACCCCGCCCGCGGG---------------------------------CACAGCGTCTGCTCCACCTCCAGCTTGTACCTGCAGGATCTGAGCGCCGCCGCCTCGGAGTGCATCGACCCCTCGGTGGTATTCCCGTACCCGCTCAATGACAGCAGCTCGCCCAAGCCCTGCGCCTCGCCAGACTCCAGCGCCTTCTCCACGTCCTCGGACTCTCTGCTCTCCTCGACGGAGTCCTCCCCGCGGGCCAGCCCCGAGCCCCTGGTGCTCCATGAAGAGACACCGCCCACTACCAGCAGCGACTCTGAGGAGGAACAAGAGGATGAAGAA---ATCGATGTCGTTTCTGTGGAAAAGAGGCAGCCTCCTGGCAAAAGGTCAGAGTCA---GGATCACCCTCTTCTGGAGGCCACAGCAAACCTCCTCACAGCCCACTGGTCCTCAAGAGGTGCCACGTCTCCACACATCAGCACAATTACGCAGCCCCTCCCTCCACGCGGAAGGACTACCCAGCTGCCAAGAGGGTCAAGTTGGACAGTGTCAGAGTCCTGAGGCAGATCAGCAACAACCGAAAATGCACCAGCCCCAGGTCC---------TCGGACACCGAAGAGAATGACAAGAGGCGAACGCACAACGTCCTGGAACGCCAGAGGAGGAACGAGCTCAAACGGAGCTTCTTTGCCCTGCGTGACCAAATCCCAGAGCTGGAAAACAATGAAAAGGCCCCCAAGGTAGTTATTCTTAAGAAAGCCACAACATACATCCTGTCCGTCCAAGCAGAGGAGCAAAAGCTCATTTCTGAAAAGGACTTGTTGCGGAAGCGACGAGAACAGTTGAAACACAAACTTGAACAGCTGCGGAACTCTTGTGCATAA Canis_familiaris ATGCCTCTCAACGTCAGCTTCGCC---AATAGGAACTATGACCTCGACTACGACTCGGTGCAGCCGTATTTCTACTGCGACGAGGAGGAG---AACTTCTAC------CAGCAGCAGCAGCAGAGCGAGCTGCAGCCGCCGGCGCCCAGCGAGGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCGCTGTCCCCGAGCCGCCGCTCCGGGCTCTGCTCGCCCTCCTACGTCGCAGTC---GCGTCCTTCTCCCCCCGGGGGGACGATGACGGCGGCGGCGGCAGCTTCTCCACCGCCGACCAGTTGGAGATGGTGACCGAGCTGCTGGGAGGAGACATGGTGAACCAGAGCTTCATCTGCGACCCGGACGACGAGACCTTCATCAAAAACATCATCATCCAGGACTGCATGTGGAGCGGCTTCTCGGCCGCCGCCAAGCTC---------GTCTCGGAGAAGCTGGCCTCCTACCAGGCTGCGCGCAAAGACAGCGGCAGCCCGAGCCCCGCTCGCGGG---------------------------------CCCGGCGGCTGCTCCACCTCCAGCCTGTACCTGCAGGACCTGAGCGCCGCCGCCTCCGAGTGCATCGACCCCTCCGTGGTCTTCCCCTACCCGCTCAATGACAGCAGCTCGCCCAAGCCCTGCGCGTCCCCCGACTCGGCCGCCTTCTCCCCGTCCTCGGACTCTCTGCTCTCCTCGGCCGAGTCCTCCCCCCGGGCCAGCCCCGAGCCCCTGGCGCTGCACGAGGAGACACCGCCCACCACCAGCAGCGACTCGGAGGAAGAACAAGAGGACGAAGAAGAAATTGATGTTGTTTCTGTGGAAAAAAGGCAGGCCCCTGCCAAAAGGTCCGAATCG---GGGTCCCCCTCTGCTGGAGGCCACAGCAAACCTCCTCACAGCCCACTGGTCCTTAAGAGATGCCATGTGTCCACCCATCAGCACAACTACGCGGCACCCCCCTCCACCAGGAAGGACTATCCCGCCGCCAAGAGGGCGAGGTTGGACAGTGGTAGAGTCCTGAAACAGATCAGCAACAACCGCAAATGTGCCAGCCCCAGGTCT---------TCGGACACGGAGGAGAATGACAAGAGGCGAACACACAACGTCTTGGAGCGCCAGAGGAGGAACGAGCTGAAACGGAGCTTCTTTGCCCTGCGTGATCAGATCCCGGAGTTGGAAAACAATGAAAAGGCCCCCAAGGTAGTGATCCTTAAAAAAGCCACCGCGTACATCCTGTCCGTCCAAGCCGAGGAGCAAAAGCTCCTTTCCGAAAAGGACTTGTTGCGGAAGCGGCGAGAACAGTTGAAACACAAACTGGAACAGCTAAGGAACTCTGGTGCCTAA Cynocephalus_variegatus ATGCCCCTCAACGTTAGCTTCACC---GACTGGAACTATGACCTCGAATACGACTCGGTGCAGCCGTATTTCTACTGCGACGAGGAGGAG---AACTTCTAC------CAGCAGCAGCAGCAGAGCGAGCTGCAGCCMCCGGCGCCCAGCGAGGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCCCTGTCCCCAAGCCGTCGCTCCGGGCTCTGCTCGCCCTCCTACGTTGCTGTC---GCGTCCTTCTCCCCCAGGGGAGATGATGACGGCGGCGGCGGCAGCTTCTCCACGGCCGACCAGCTGGAGATGGTGACCGAGCTACTGGGAGGAGACATGGTGAACCAGAGCTTCATCTGCGACCCGGACGACGAGACCTTCATTAAAAACATCATCATCCAAGACTGTATGTGGAGCGGGTTCTCGGCCGCTGCCAAGCTG---------GTCTCAGAGAAGCTGGCCTCCTACCAGGCTGCGCGCAAAGACAGCAGCAGCCCGAGCCCCGCGCGCGGG---------------------------------CACGGCGGCTGCTCCACCTCCAGCCTGTACCTGCAGGACCTGAGCGCCGCCGCCTCCGAGTGCATCGACCCCTCGGTGGTCTTCCCCTACCCGCTCAACGACAGCAGCTCGCCCAAGCCCTGCGCCTCGCCCGACTCTACCGCCTTCTCCCCGTCCTCGGACTCTCTGCTGTCCTCGACCGAATCCTCTCCGCAGGCCAGCCCCGAGCCCCTGACACTCCACGAGGAGACACCACCCACCACCAGCAGCGACTCTGAGGAAGAACAAGAGGATGAGGAAGAAATTGATGTCGTTTCTGTGGAAAAGAGGCAGCCCCCTGCCAAAAGGTCAGAATCG---GGGTCACCTTCTGCTGGAGGCCACAGCAAACCTCCTCACAGCCCACTGGTCCTCAAGAGGTGCCACGTCTCCACCCATCAGCACAATTATGCAGCACCCCCCTCCACTAGGAAGGACTATCCGGCTGCCAAGAGAGCTAAGTTGGACAGTGGCAGAGTCCTGAAACAGATAAGCAACAACCGAAAATGTGCCAGTCCCAGGTCC---------TCGGACACAGAGGAGAATGACAAGAGGCGGACACACAACGTCTTGGAACGCCAAAGGAGAAACGAGCTGAAACGAAGCTTTTTTGCCCTGCGTGACCAGATCCCAGAGTTGGAAAACAATGAAAAGGCCCCCAAAGTAGTTATCCTTAAAAAAGCCACAGCATACATCCTGTCTGTCCAAGCAGAGGAGCAAAAACTTATTTCAGAAAAGGACTTGTTGCGGAAGCGGCGAGAACAGTTGAAACACAAACTTGAACAGCTGCGGAACTCTTGTGCCTAA Felis_silvestris ATGCCCCTCAACGTCAGCTTCGCC---AACAGGAACTATGACCTCGACTACGACTCGGTGCAGCCCTATTTCTACTGCGACGAGGAGGAG---AACTTCTAC------CAGCAGCAGCAGCAGAGCGAGCTGCAGCCGCCGGCGCCCAGCGAGGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCGCTGTCCCCGAGCCGCCGCTCGGGGCTCTGCTCGCCCTCCTACGTCGCCTTC---GCGTCCTTCTCCCCCCGGGGGGACGACGACGGCGGCGGCGGCAGCTTTTCCACGGCCGACCAGTTGGAGATGGTGACCGAGCTGCTGGGAGGAGACATGGTGAATCAGAGCTTCATCTGCGACCCGGACGACGAGACCTTCATCAAAAACATCATCATCCAGGACTGCATGTGGAGCGGCTTCTCGGCCGCCGCCAAGCTC---------GTCTCGGAGAAGCTGGCCTCCTACCAGGCTGCGCGCAAAGACAGCGGCAGCCCGAGCCCCGCCCGCGGG---------------------------------CCCGGAGGCTGCCCCACCTCCAGCTTGTACCTGCAGGACCTGACCGCCGCCGCCTCCGAGTGCATCGACCCCTCCGTGGTCTTCCCCTACCCGCTCAACGACAGCAGCTCGCCCAAGCCCTGCGCCTCCCCCGACTCCGCCGCCTTCTCCCCGTCCTCGGACTCTCTGCTCTCCTCGGCGGAGTCCTCCCCGCGGGCCAGCCCCGAGCCCCTGGCGCTCCACGAGGAGACACCGCCCACCACCAGCAGCGACTCTGAGGAAGAACAAGAGGAAGAAGAAGAAATTGATGTCGTTTCTGTGGAGAAAAGGCAGCCCCCTGCCAAAAGGTCGGAATCG---GGGTCACCCTCTGCCGGAGGCCACAGCAAACCTCCTCACAGCCCGCTGGTCCTTAAGAGATGCCACGTGCCCACCCACCAGCACAATTACGCAGCGCCCCCCTCCACTAGGAAGGACTACCCAGCCGCCAAGAGGGCTAAGTTGGACAGTGGCAGGGTCCTGAAACAGATCAGCAACAACCGCAAATGTATCAGCCCCAGGTCT---------TCGGACACGGAGGAGAACGACAAGAGGCGGACGCACAACGTCTTGGAACGCCAGAGGAGAAACGAGCTGAAACGGAGCTTTTTTGCCCTGCGCGACCAGATCCCAGAGTTGGAAAACAACGAAAAGGCCCCCAAGGTGGTGATCCTTAAAAAGGCCACCGCGTACATCCTGTCCGTCCAAGCAGGGGAGCAAAAGCTCATTTCGGAAAAGGACCTGTTGAGGAAGCGACGAGAACAGTTGAAACACAAACTTGAACAGCTAAGGAACTCTTGTGCATAA Gallus_gallus ATGCCGCTCAGCGCCAGCCTCCCC---AGCAAGAACTACGATTACGACTACGACTCGGTGCAGCCCTACTTCTACTTCGAGGAGGAGGAGGAGAACTTCTACCTGGCGGCGCAGCAGCGGGGCAGCGAGCTGCAGCCTCCCGCCCCGTCCGAGGACATCTGGAAGAAGTTTGAGCTCCTGCCCACGCCGCCCCTCTCGCCCAGCCGCCGCTCCAGCCTG---------------------GCCGCCGCCTCCTGCTTCCCT---------------------------------TCCACCGCCGACCAGCTGGAGATGGTGACGGAGCTGCTCGGGGGGGACATGGTCAACCAGAGCTTCATCTGCGACCCGGACGACGAATCCTTCGTCAAATCCATCATCATCCAGGACTGCATGTGGAGCGGCTTCTCCGCCGCCGCCAAGCTGGAGAAGGTGGTGTCGGAGAAGCTCGCCACCTACCAAGCCTCCCGCCGGGAGGGGGGCCCCGCCGCCGCCTCCCGACCCGGCCCGCCGCCCTCGGGGCCGCCGCCTCCTCCCGCCGGCCCCGCCGCCTCGGCCGGCCTCTACCTGCACGACCTGGGAGCCGCGGCCGCCGACTGCATCGACCCCTCGGTGGTCTTCCCCTACCCGCTCAGCGAG---CGCGCCCCGCGG---------------------------------------------------------------GCCGCCCCGCCCGGCGCCAACCCCGCGGCTCTG---CTGGGGGTCGACACGCCGCCCACGACCAGCAGCGACTCGGAAGAAGAACAAGAAGAAGATGAGGAAATCGATGTCGTTACATTAGCTGAAGCGAACGAGTCTGAATCCAGCACAGAGTCC---AGCACAGAAGCATCAGAGGAGCACTGTAAGCCCCACCACAGTCCGCTGGTCCTCAAGCGGTGTCACGTCAACATCCACCAACACAACTACGCTGCTCCTCCCTCCACCAAGGTGGAATACCCAGCCGCCAAGAGGCTAAAGTTGGACAGTGGCAGGGTCCTCAAACAGATCAGCAACAACCGAAAATGCTCCAGTCCCCGCACG---------TCAGACTCAGAGGAGAACGACAAGAGGCGAACGCACAACGTCTTGGAGCGCCAGCGAAGGAATGAGCTGAAGCTGAGTTTCTTTGCCCTGCGTGACCAGATACCCGAGGTGGCCAACAACGAGAAGGCGCCCAAGGTTGTCATCCTGAAAAAAGCCACGGAGTACGTTCTGTCTATCCAATCGGACGAGCACAGACTAATCGCAGAGAAAGAGCAGTTGAGGCGGAGGAGAGAACAGTTGAAACACAAACTTGAGCAGCTAAGGAACTCTCGTGCATAG Gorilla_gorilla ATGCCCCTCAACGTTAGCTTCACC---AACAGGAACTATGACCTCGACTACGACTCGGTGCAGCCGTATTTCTACTGCGACGAGGAGGAG---AACTTCTAC------CAGCAGCAGCAGCAGAGCGAGCTGCAGCCCCCGGCGCCCAGCGAGGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCCCTGTCCCCTAGCCGCCGCTCCGGGCTCTGCTCGCCTTCCTACGTTGCGGTC---ACGCCCTTCTCCCCTCGGGGAGACAACGACGGCGGTGGCGGGAGCTTCTCCACGGCCGACCAGCTGGAGATGGTGACCGAGCTGCTGGGAGGAGACATGGTGAACCAGAGTTTCATCTGCGACCCGGACGACGAGACCTTCATCAAAAACATAATCATCCAGGACTGTATGTGGAGCGGCTTCTCGGCCGCCGCCAAGCTC---------GTCTCAGAGAAGCTGGCCTCCTACCAGGCTGCGCGCAAAGACAGCGGCAGCCTGAACCCCGCCCGCGGC---------------------------------CACAGCGTCTGCTCCACCTCCAGCTTATACCTGCAGGATCTGAGCGCTGCCGCCTCAGAGTGCATCGACCCCTCGGTGGTCTTCCCCTACCCTCTCAACGACAGCAGCTCGCCCAAGTCCTGCGCCTCGCAAGACTCCAGCGCCTTCTCTCCGTCCTCGGATTCTCTGCTCTCCTCGACGGAGTCCTCCCCGCAGGGCAGCCCCGAGCCCCTGGTGCTCCATGAGGAGACACCGCCCACCACCAGCAGCGACTCTGAGGAGGAACAAGAAGATGAGGAAGAAATCGATGTTGTTTCTGTGGAAAAGAGGCAGGCTCCTGGCAAAAGGTCAGAGTCT---GGATCACCTTCTGTTGGAGGCCATAGCAAACCTCCTCACAGCCCACTGGTCCTCAAGAGGTGCCACGTCTCCACACATCAGCACAACTACGCAGCGCCTCCCTCCACTCGGAAGGACTATCCTGCTGCCAAGAGGGTCAAGTTGGACAGTGTCAGAGTCCTGAGACAGATCAGCAACAACCGAAAATGCACCAGCCCCAGGTCC---------TCGGACACCGAGGAGAATGACAAGAGGCGAACACACAACGTCTTGGAGCGCCAGAGGAGGAACGAGCTAAAACGGAGCTTTTTTGCCCTGCGTGACCAGATCCCGGAGTTGGAAAACAATGAAAAGGCCCCCAAGGTAGTTATCCTTAAAAAAGCCACAGCATACATCCTGTCCGTCCAAGCAGAGGAGCAAAAGCTCATTTCTGAAGAGGACTTGTTGCGGAAACGACGAGAACAGTTGAAACACAAACTTGAACAGCTACGGAACTCTTGTGCGTAA Homo_sapiens ATGCCCCTCAACGTTAGCTTCACC---AACAGGAACTATGACCTCGACTACGACTCGGTGCAGCCGTATTTCTACTGCGACGAGGAGGAG---AACTTCTAC------CAGCAGCAGCAGCAGAGCGAGCTGCAGCCCCCGGCGCCCAGCGAGGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCCCTGTCCCCTAGCCGCCGCTCCGGGCTCTGCTCGCCCTCCTACGTTGCGGTC---ACACCCTTCTCCCTTCGGGGAGACAACGACGGCGGTGGCGGGAGCTTCTCCACGGCCGACCAGCTGGAGATGGTGACCGAGCTGCTGGGAGGAGACATGGTGAACCAGAGTTTCATCTGCGACCCGGACGACGAGACCTTCATCAAAAACATCATCATCCAGGACTGTATGTGGAGCGGCTTCTCGGCCGCCGCCAAGCTC---------GTCTCAGAGAAGCTGGCCTCCTACCAGGCTGCGCGCAAAGACAGCGGCAGCCCGAACCCCGCCCGCGGC---------------------------------CACAGCGTCTGCTCCACCTCCAGCTTGTACCTGCAGGATCTGAGCGCCGCCGCCTCAGAGTGCATCGACCCCTCGGTGGTCTTCCCCTACCCTCTCAACGACAGCAGCTCGCCCAAGTCCTGCGCCTCGCAAGACTCCAGCGCCTTCTCTCCGTCCTCGGATTCTCTGCTCTCCTCGACGGAGTCCTCCCCGCAGGGCAGCCCCGAGCCCCTGGTGCTCCATGAGGAGACACCGCCCACCACCAGCAGCGACTCTGAGGAGGAACAAGAAGATGAGGAAGAAATCGATGTTGTTTCTGTGGAAAAGAGGCAGGCTCCTGGCAAAAGGTCAGAGTCT---GGATCACCTTCTGCTGGAGGCCACAGCAAACCTCCTCACAGCCCACTGGTCCTCAAGAGGTGCCACGTCTCCACACATCAGCACAACTACGCAGCGCCTCCCTCCACTCGGAAGGACTATCCTGCTGCCAAGAGGGTCAAGTTGGACAGTGTCAGAGTCCTGAGACAGATCAGCAACAACCGAAAATGCACCAGCCCCAGGTCC---------TCGGACACCGAGGAGAATGTCAAGAGGCGAACACACAACGTCTTGGAGCGCCAGAGGAGGAACGAGCTAAAACGGAGCTTTTTTGCCCTGCGTGACCAGATCCCGGAGTTGGAAAACAATGAAAAGGCCCCCAAGGTAGTTATCCTTAAAAAAGCCACAGCATACATCCTGTCCGTCCAAGCAGAGGAGCAAAAGCTCATTTCTGAAGAGGACTTGTTGCGGAAACGACGAGAACAGTTGAAACACAAACTTGAACAGCTACGGAACTCTTGTGCGTAA Hylobates_lar ATGCCCCTCAACGTTAGCTTCACC---AACAGGAACTATGACCTCGACTACGACTCGGTGCAGCCGTATTTCTACTGCGACGAGGAGGAG---AACTTCTAC------CAGCAGCAGCAGCAGAGCGAGCTGCAGCCCCCGGCGCCCAGCGAGGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCCCTGTCCCCTAGCCGCCGCTCCGGGCTCTGCTCGCCCTCCTACGTTGCGGTC---ACGCCCTTCTCCCCTCGGGGAGACAACGACGGCGGTGGCGGGAGCTTCTCCACGGCCGACCAGCTGGAGATGGTGACCGAGCTGCTGGGAGGAGACATGGTGAACCAGAGTTTCATCTGCGACCCGGACGACGAGACCTTCATCAAAAACATCATCATCCAGGACTGTATGTGGAGCGGCTTCTCGGCCGCCGCCAAGCTC---------GTCTCCGAGAAGCTGGCCTCCTACCAGGCTGCGCGCAAAGACAGCAGCAGCCCGAACCCCGCCCGCGGC---------------------------------CACAGCGTCTGCTCCACCTCCAGCTTGTACCTGCAGGATCTGAGCGCCGCCGCCTCAGAGTGCATCGACCCCTCGGTGGTCTTCCCCTACCCTCTCAACGACAGCAGCTCGCCCAAGTCCTGCGCCTCGCCGGACTCCAGCGCCTTCTCTCCGTCCTCGGATTCTCTGCTCTCCTCGACAGAGTCCTCCCCTCAGGCCAGCCCGGAGCCCCTGGTGCTCCATGAGGAGACACCGCCCACCACCAGCAGCGACTCTGAGGAAGAACAAGAAGATGAGGAAGAAATCGATGTTGTTTCTGTGGAAAAGAGGCAGGCTCCTAGCAAAAGGTCAGAGTCT---GGATCACCTTCTGCTGGAGGCCACAGCAAACCTCCTCACAGCCCACTGGTCCTCAAGAGGTGCCACGTCTCCACACATCAGCACAACTACGCAGCGCCTCCCTCCACTCGGAAGGACTATCCTGCTGCCAAGAGGGTCAAGTTGGACAGTGTCAGAGTCCTGAGACAGATCAGCAACAACCGAAAATGCACCAGCCCCAGGTCC---------TCGGACACCGAGGAGAATGACAAGAGGCGAACACACAACGTCTTGGAGCGCCAGAGGAGGAATGAGCTAAAACGGAGCTTTTTTGCCCTGCGTGACCAGATCCCGGAGTTGGAAAACAATGAAAAGGCCCCCAAGGTAGTTATCCTTAAAAAAGCCACAGCATACATCCTGTCCGTCCAAGGAGAGGAGCAAAAGCTCACTTCTGAAAAGGACTTGTTGCGGAAACGACGAGAACAGTTGAAACACAAACTTGAACAGCTACGGAACTCTTGTGCATAA Marmota_monax ATGCCCCTCAACGTCAGCTTCGCC---AACAGGAACTATGACCTCGACTACGACTCGGTGCAGCCGTATTTCTACTGCGACGAAGAGGAG---AACTTCTAC------CAGCAGCAGCAGCAGAGCGAGCTGCAGCCGCCGGCGCCCAGCGAAGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCACCCCTGTCCCCGAGCCGCCGCTCCGGGCTCTGCTCGCCTCCCTGTGTTACGGTC---GCGTCTTTCTCCCCCCCGGGAGACGACGATGGTGGCGGCGGCAGTTTCTCCACAGCCGACCAGCTGGAGATGGTGACCGAGCTGTTGGGAGGAGATATGGTGAACCAGAGCTTCATCTGCGACCCGGACGACGAGACCTTCATTAAAAACATCATCATCCAGGACTGTATGTGGAGCGGCTTCTCGGCTGCTGCCAAGCTC---------GTCTCGGAGAAGCTGGCCTCCTATCAGGCTGCGCGCAAAGACACCGGCTGCCCGAGCCCCGCCCGCGGC---------------------------------CACAGCGGCTGCTCCTCCTCCAGCCTCTACCTACAAGACCTGAGCCCGCGCGCGTCCGAGTGCATCGACCCCTCGGTGGTCTTCCCCTACCCGCTCAACGACAGCAGCTCGCCCAAGCCCTGCGCCTCGCCCGACTCCACCGCCTTCTCTCCATCCTCGGACTCTCTGCTCTCCTCCACGGAGTCCTCCCCGCGGGCCAGCCCCGAGCCCCTAGTGCTCCACGAGGAGACACCGCCTACCACCAGCAGCGACTCTGAGGAAGAACAAGAGGATGAGGAAGAAATTGATGTCGTCTCTGTGGAAAAGAGACAGCCTTCTGCCAGAAGGTCAGAATCG---GTGTCACCCCCAGCAGGAAGCCACAGCAAACCTCCTCACAGCCCACTGGTCCTGAAGAGGTGCCACGTCTCCACACACCAGCACAATTACGCAGCACCCCCCTCCACTAGGAAGGACTGTCCTGCTGCCAAGAGGGCTAAGTTGGACAGTGGCAGAGTCCTGAAACAGATCAGCAACAACCGCAAGTGTGCCAGCCCCAGGTCC---------TCGGACACGGAGGAGAATGACAAGAGGCGGACACACAACGTCTTGGAACGCCAGAGGAGAAATGAGCTGAAACGGAGCTTTTTTGCCCTGCGTGACCAGATCCCAGAGTTGGAAAACAACGAAAAGGCCCCCAAGGTAATAATCCTTAAAAAAGCCACAGCATATATCCTGTCCGTCCAAGCAGAAGAGCAAAAGCTCATTTCAGAAAAGGACTTGTTGAGGAAGCGGCGAGAACAGTTAAAACAGAAACTTGAACAGCTGCGGAACTCTTGTGCCTAA Mus_musculus ATGCCCCTCAACGTGAACTTCACC---AACAGGAACTATGACCTCGACTACGACTCCGTACAGCCCTATTTCATCTGCGACGAGGAAGAG---AATTTCTAT------CACCAGCAACAGCAGAGCGAGCTGCAGCCGCCCGCGCCCAGTGAGGATATCTGGAAGAAATTCGAGCTGCTTCCCACCCCGCCCCTGTCCCCGAGCCGCCGCTCCGGGCTCTGCTCTCCATCCTATGTTGCGGTCGCTACGTCCTTCTCCCCAAGGGAAGACGATGACGGCGGCGGTGGCAACTTCTCCACCGCCGATCAGCTGGAGATGATGACCGAGTTACTTGGAGGAGACATGGTGAACCAGAGCTTCATCTGCGATCCTGACGACGAGACCTTCATCAAGAACATCATCATCCAGGACTGTATGTGGAGCGGTTTCTCAGCCGCTGCCAAGCTG---------GTCTCGGAGAAGCTGGCCTCCTACCAGGCTGCGCGCAAAGACAGCACCAGCCTGAGCCCCGCCCGCGGG---------------------------------CACAGCGTCTGCTCCACCTCCAGCCTGTACCTGCAGGACCTCACCGCCGCCGCGTCCGAGTGCATTGACCCCTCAGTGGTCTTCCCCTACCCGCTCAACGACAGCAGCTCGCCCAAATCCTGTACCTCGTCCGATTCCACGGCCTTCTCTCCTTCCTCGGACTCGCTGCTGTCCTCC---GAGTCCTCCCCACGGGCCAGCCCTGAGCCCCTAGTGCTGCATGAGGAGACACCGCCCACCACCAGCAGCGACTCTGAAGAAGAGCAAGAAGATGAGGAAGAAATTGATGTGGTGTCTGTGGAGAAGAGGCAAACCCCTGCCAAGAGGTCGGAGTCG---GGCTCATCTCCATTCCGAGGCCACAGCAAGCCTCCGCACAGCCCACTGGTCCTCAAGAGGTGCCACGTCTCCACTCACCAGCACAACTACGCCGCACCCCCCTCCACAAGGAAGGACTATCCAGCTGCCAAGAGGGCCAAGTTGGACAGTGGCAGGGTCCTGAAGCAGATCAGCAACAACCGCAAGTGCTCCAGCCCCAGGTCC---------TCAGACACGGAGGAAAACGACAAGAGGCGGACACACAACGTCTTGGAACGTCAGAGGAGGAACGAGCTGAAGCGCAGCTTTTTTGCCCTGCGTGACCAGATCCCTGAATTGGAAAACAACGAAAAGGCCCCCAAGGTAGTGATCCTCAAAAAAGCCACCGCCTACATCCTGTCCATTCAAGCAGACGAGCACAAGCTCACCTCTGAAAAGGACTTATTGAGGAAACGACGAGAACAGTTGAAACACAAACTCGAACAGCTTCGAAACTCTGGTGCATAA Ovis_aritis ATGCCCCTCAACGTCAGCTTCGCC---AACAGAAACTATGACCTCGACTACGATTCGGTGCAGCCTTATTTCTACTGCGACGAGGAGGAG---AACTTCTAC------CACCAGCAGCAGCAGAGCGAACTGCAGCCGCCGGCGCCCAGCGAGGACATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCCCTGTCCCCTAGCCGCCGCTCCGGGCTCTGCTCGCCGTCGTACGTCGCGGTC---GCCTCCTTCTCGCCCAGGGGAGACGACGACGGCGGCGGCGGCAGCTTTTCCTCCGCGGACCGGTTGGAGATGGTGACCGAGCTGCTGGGAGGCGACATGGTGAACCAGAGCTTCATCTGCGACCCCGACGATGAGACCCTCATCAAAAACATCATCATCCAGGACTGTATGTGGAGCGGCTTCTCGGCCGCCGCCAAGCTC---------GTCTCGGAGAAGCTGGCCTCTTACCAGGCTGCGCGCAAAGACGGCGGCAGCCCGAGCCCCGCCCGCGGG---------------------------------CACGGCGGCTGCTCCACCTCCAGCTTGTACCTGCAGGACCTGAGCGCCGCCGCCTCTGAATGCATCGACCCCTCGGTGGTCTTCCCCTACCCGCTCAACGACAGCAGCTCGCCCAAGCCCTGCGCCTCCCCGGACTCCACCGCCTTCTCCCCCTCCTCTGACTCTCTGCTCTCCTCTGCTGAGTCCTCCCCGCGGGCCAGTCCCGAGCCCCTGGCTCTCCACGAGGAGACCCCACCCACGACCAGCAGCGACTCTGAGGAAGAACAAGAGGATGAGGAAGAAATTGATGTTGTCTCTGTGGAAAAGAGGCAACCCCCTGCCAAAAGGTCAGAATCG---GGGTCACCCTCTGCCGGCAGCCACAGCAAACCTCCTCACAGCCCGTTGGTCCTAAAGAGATGCCACGTGTCTACGCATCAGCACAATTACGCAGCGCCCCCCTCCACTAGGAAGGACTATCCCGCCGCCAAGAGGGCTAAGTTGGACAGTGGCAGGGTCCTGAAACAGATCAGCAACAACCGCAAATGTGCCAGCCCGAGGTCT---------TCGGACACGGAGGAGAATGACAAGAGGCGGACACACAACGTTTTGGAGCGCCAGAGGAGAAACGAGCTGAAACGCAGCTTTTTTGCTCTTCGTGACCAGATCCCAGAGTTGGAGAACAATGAAAAAGCCCCCAAAGTAGTTATCCTTAAAAAAGCCACAGCATACATCCTGTCGGTCCAAGCAGAGGAGCAAAAGCTCATTTCAGAAAAAGACGTGTTGCGGAAGAGGCGAGAACAGTTGAAACTCAAACTTGAACAGATACGGAACTCTTGCGCCTAA Pan_troglodytes ATGCCCCTCAACGTTAGCTTCACC---AACAGGAACTATGACCTCGACTACGACTCGGTGCAGCCGTATTTCTACTGCGACGAGGAGGAG---AACTTCTAC------CAGCAGCAGCAGCAGAGCGAGCTGCAGCCCCCGGCGCCCAGCGAGGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCCCTGTCCCCTAGCCGCCGCTCCGGGCTCTGCTCGCCCTCCTACGTTGCGGTC---ACGCCCTTCTCCCTTCGGGGAGACAACGACGGCGGTGGCGGGAGCTTCTCCACGGCCGACCAGCTGGAGATGGTGACCGAGCTGCTGGGAGGAGACATGGTGAACCAGAGTTTCATCTGCGACCCGGACGACGAGACCTTCATCAAAAACATCATCATCCAGGACTGTATGTGGAGCGGCTTCTCGGCCGCCGCCAAGCTC---------GTCTCAGAGAAGCTGGCCTCCTACCAGGCTGCGCGCAAAGACAGCGGCAGCCCGAACCCCGCCCGCGGC---------------------------------CACAGCGTCTGCTCCACCTCCAGCTTGTACCTGCAGGATCTGAGCGCCGCCGCCTCAGAGTGCATCGACCCCTCGGTGGTCTTCCCCTACCCTCTCAACGACAGCAGCTCGCCCAAGTCCTGCCCCTCGCAAGACTCCAGCGCCTTCTCTCCGTCCTCGGATTCTCTGCTCTCCTCGACGGAGTCCTCCCCGCAGGGCAGCCCCGAGCCCCTGGTGCTCCATGAGGAGACACCGCCCACCACCAGCAGCGACTCTGAGGAGGAACAAGAAGATGAGGAAGAAATCGATGTTGTTTCTGTGGAAAAGAGGCAGGCTCCTGGCAAAAGGTCAGAGTCT---GGATCACCTTCTGCTGGAGGCCACAGCAAACCTCCTCACAGCCCACTGGTCCTCAAGAGGTGCCACGTCTCCACACATCAGCACAACTACGCAGCGCCTCCCTCCACTCGGAAGGACTATCCTGCTGCCAAGAGGGTCAAGTTGGACAGTGTCAGAGTCCTGAGACAGATCAGCAACAACCGAAAATGCACCAGCCCCAGGTCC---------TCGGACACCGAGGAGAATGACAAGAGGCGAACACACAACGTCTTGGAGCGCCAGAGGAGGAACGAGCTAAAACGGAGCTTTTTTGCCCTGCGTGACCAGATCCCGGAGTTGGAAAACAATGAAAAGGCCCCCAAGGTAGTTATCCTTAAAAAAGCCACAGCATACATCCTGTCCGTCCAAGCAGAGGAGCAAAAGCTCATTTCTGAAGAGGACTTGTTGCGGAAACGACGAGAACAGTTGAAACACAAACTTGAACAGCTACGGAACTCTTGTGCGTAA Pongo_pygmaeus ATGCCCCTCAACGTTAGCTTCACC---AACAGGAACTATGACCTCGACTACGACTCGGTGCAGCCGTATTTCTACTGCGACGAGGAGGAG---AACTTCTAC------CAGCAGCAGCAGCAGAGCGAGCTGCAGCCCCCGGCGCCCAGCGAGGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCCCTGTCCCCTAGCCGCCGCTCCGGGCTCTGCTCGCCCTCCTACGTTGCGGTC---ACGCCCTTCTCCCCTCGGGGAGACAACGACGGCGGTGGCGGGAGCTTCTCCACGGCCGACCAGCTGGAGATGGTGACCGAGCTGCTGGGAGGAGACATGGTGAACCAGAGTTTCATCTGCGACCCGGACGACGAGACCTTCATCAAAAACATCATCATCCAGGACTGTATGTGGAGCGGCTTCTCGGCCGCCGCCAAGCTC---------GTCTCAGAGAAGCTGGCCTCCTACCAGGCTGCGCGCAAAGACAGCGGCAGCCCGAACCCCGCCCGCGGC---------------------------------CACAGCGTCTGCTCCACCTCTAGCTTGTACCTGCAGGATCTGAGCGCCGCCGCCTCAGAGTGCATCGACCCCTCGGTGGTCTTCCCCTACCCTCTCAACGACAGTAGCTTGCCCAAGTCCTGCACCTCGCCAGACTCCAGCGCCTTCTCTCCGTCCTCGGATTCTCTGCTCTCCTCGACGGAGTCCTCCCCGCAGGCCAGCCCCGAGCCCCTGGTGCTCCATGAGGAGACACCGCCCACCACCAGCAGCGACTCTGAGGAGGAACAAGAAGATGAGGAAGAAATCGATGTTGTTTCTGTGGAAAAGAGGCAGGCTCCTGGCAAAAGGTCAGAGTCT---GGATCACCTTCTGCTGGAGGCCACATCAAACCTCCTCACAGCCCACTGGTCCTCAAGAGGTGCCACGTCTCCACACATCAGCACAACTACGCAGCGCCTCCCTCCACTCGGAAGGACTATCCTGCTGCCAAGAGGGTCAAGTTGGACAGTGTCAGAGTCCTGAGACAGATCAGCAACAACCGAAAATGCACCAGCCCCAGGTCC---------TCGGACGCCGAGGAGAATGACAAGAGGCGAACACACAACGTCTTGGAGCGCCAGAGGAGGAACGAGCTAAAACGGAGCTTTTTTGCCCTGCGTGACCAGATCCCGGAGTTGGAAAACAATGAAAAGGCCCCCAAGGTAGTTATCCTTAAAAAAGCCACAGCATACATCCTGTCCGTCCAAGCAGAGGAGCAAAAGCTCATTTCTGAAAAGGACTTGTTGCGGAAACGACGAGAACAGTTGAAACACAAACTTGAACAGCTACGGAACTCTTGTGCGTAA Pteropus_hypomelanus ATGCCCCTCAACGTCAGCTTCGCC---AGCAGGAACTATGACCTCGACTACGACTCGGTGCAGCCCTATTTCTACTGCGACGAGGAGGAG---AACTTCTAC------CACCAGCAGCAACAGAGCGAGCTGCAGCCGCCGGCGCCCAGCGAGGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCCCTGTCGCCGAGCCGGCGCTCCGGGCTCTGCTCGCCCTCCTACGTTGCTGCGTTCGCGTCCTTCTCCCCCAGGGACGATGACGACGGCGGCGGCGGCAGCTTTTCGTCGGCCGACCAGCTGGAGATGGTGACCGAGCTGCTGGGAGGAGACATGGTGAACCAGAGCTTCATCTGCGACCCGGACGACGAGACCTTCATCAAAAACATCATCATCCAGGACTGTATGTGGAGCGGCTTCTCGGCCGCCGCCAAGCTC---------GTCTCCGAGAAGCTGGCCTCCTACCAGGCTGCGCGCAAAGACGGCGGCAGCCGGAGCCCCGCCCGCGGG---------------------------------CACAGCGCCTGCTCCACCTCCAGCCTGTACCTGCAGGACCTGAGCGCCGCCGCCTCCGAGTGCATCGACCCCTCCGTGGTCTTCCCCTACCCGCTCAACGACAGCAGCTCGCCGAAGCCCTGCGCCTCCCCGGACTCCACCGCCTTCTCCCCGTCCTCGGACTCTCTGCTCTCCTCGGCCGCGTCCTCCCCGCGGGCCAGCCCCGAGCCCCTGGTGCTCCACGAGGAGACACCACCCACCACCAGCAGCGACTCTGAGGAAGAACAAGAGGATGAGGAAGAAATCGATGTTGTTTCTGTGGAAAAGAGGCAGCCCCCTGCCAAAAGGTCAGAATCG---GGGTCACCCTCTGCTGGAAGTCACAGCAAACCTCCTCACAGCCCACTGGTCCTTAAGCGGTGCCACGTGTCCACCCATCAGCACAATTACGCAGCACCCCCTTCCACCAGGAAAGACTATCCCCCCACCAAGAGGGCTAAGTTGGACAGTGGCCGAGTCCTGAAACAGATCAGCAACAACCGCAAATGTGCCAGCCCCAGGTCC---------TCAGACACAGAGGAGAATGACAAGAGGCGAACACACAACGTTCTGGAACGCCAGAGGAGAAACGAGCTGAAACGCAGCTTTTTCGCCCTGCGTGACCAGATCCCGGAGTTGGAAAACAATGAAAAGGCCCCCAAGGTAGTTATCCTTAAAAAAGCCACCGCATACATCCTGGCCATCCAAGCAGAGGAGCAAAAGCTCATTTCAGAAAAAGACTTATTGCGGAAGCGACGAGAACAGTTGAAACACAAACTTGAACAGCTACGGAACTCTTGTGCATGA Rattus_norvegicus ATGCCCCTCAACGTGAGCTTCGCT---AACAGGAACTATGACCTCGACTACGACTCGGTGCAGCCCTATTTCATCTGCGACGAGGAAGAG---AATTTCTAT------CACCAGCAACAGCAGAGCGAGCTGCAGCCGCCCGCACCCAGTGAGGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCCCTGTCCCCCAGCCGCCGCTCCGGGCTCTGCTCTCCGTCCTATGTCGCGGTCGCTACGTCCTTCTCCCCAAGGGAGGACGATGACGGTGGCGGTGGCAACTTCTCCACCGCCGATCAGCTGGAGATGATGACCGAGCTACTTGGAGGAGACATGGTGAATCAGAGCTTCATCTGCGATCCTGACGATGAGACCTTCATCAAGAACATCATCATCCAGGACTGTATGTGGAGCGGCTTCTCGGCCGCTGCCAAACTG---------GTCTCCGAGAAGCTGGCCTCTTACCAGGCTGCGCGCAAAGACAGCACCAGCCTGAGCCCCGCCCGCGGG---------------------------------CACAGCGTCTGCTCCACCTCCAGCCTGTACCTGCAGGACCTCACCGCCGCAGCGTCCGAGTGCATCGACCCCTCAGTGGTCTTCCCCTACCCGCTCAACGACAGCAGCTCGCCCAAATCCTGTACCTCGTCCGATTCCACGGCCTTCTCTTCTTCCTCGGACTCGCTGCTGTCCTCC---GAGTCCTCCCCACGGGCCACCCCTGAGCCCCTAGTGCTGCATGAAGAGACACCGCCCACCACCAGCAGCGACTCTGAAGAAGAACAAGATGATGAGGAAGAAATTGATGTGGTGTCTGTGGAAAAGAGGCAACCCCCTGCCAAGAGGTCCGAGTCA---GGGTCATCCCCATCAAGAGGCCACAGCAAACCTCCACACAGCCCACTGGTCCTCAAGAGGTGCCATGTCTCTACTCACCAGCACAATTATGCAGCACCCCCCTCCACAAGGAAGGACTATCCAGCTGCCAAGAGGGCCAAGTTGGACAGTGGCAGGGTCCTGAAACAGATCAGCAACAACCGCAAATGCTCCAGCCCCAGGTCC---------TCAGACACCGAGGAAAACGACAAGAGGCGGACACACAACGTCTTGGAACGTCAGAGGAGAAACGAGCTGAAGCGTAGCTTTTTTGCCCTGCGCGACCAGATCCCTGAGTTGGAAAACAACGAAAAGGCCCCCAAGGTAGTTATCCTCAAAAAAGCCACCGCCTACATCCTGTCCGTTCAAGCAGATGAGCACAAACTCATCTCAGAAAAGGACTTACTGAGGAAACGGCGAGAACAGTTGAAACACAAACTCGAACAGCTTCGAAACTCTGGTGCATAA Serinus_canaria ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GAAGAAGAACAAGAGGAAGATGAGGAAATTGATGTTGTTACATTAGCTGAAGCAAATGAGTACGAATCCAGCACAGAGTCCAGCAGCACAGAGACATCAGAAGAGAACAGTAAGCCCCACCAAAGCCCGCTAGTTCTCAAAAGGTGTCATGTCAACATCCATCAGCACAATTATGCTGCTCCTCCCTCCACCAAGGTTGAATACCCAGCTGCAAAAAGGCTAAGGTTGGACAGTGGCAGAGTTCTCAAACAGATCAGAACAACCGAAAAATGCTCCAGTCCGCGCACGTCAGGCTCGTCAGATTCGGAAGAGAACGACAAGAGGCGAACACACAATGTCTTGGAGCGCCAGAGGAGAAATGAGCTGAAGTTGAGTTTCTTTGCCTTGCGTGACGAAATACCCGAGGTGGCCAACAATGAAAAGGCTCCCAAGGTTGTCATCCTGAAAAAAGCAACGGAGTATGTTCTTTCCATCCAGTCAGAGGAACACAGACTGATTGCAGAGAAAGAGCAGTTGAGACGGAGGAGAGAACAGTTGAAACACAAACTTGAGCAGCTAAGGAACTGTTGTGCGTGA Sus_scrofa ATGCCCCTCAACGTCAGCTTCACC---AACAGGAACTATGACCTCGACTACGACTCGGTGCAGCCTTATTTCTACTGCGACGAGGAGGAG---AACTTCTAC------CAGCAGCAGCAGCAGAGCGAGCTGCAGCCGCCGGCACCCAGCGAGGATATCTGGAAGAAATTCGAGTTGCTGCCCACCCCGCCCCTGTCCCCGAGCCGCCGCTCCGGGCTCTGCTCGCCCTCGTACGTCGCGGTC---GCGTCCTTCTCCCCCAGGGGAGACGATGACGGCGGCGGCGGCAGCTTTTCCACGGCCGACCAGTTGGAGATGGTGACCGAGCTGCTGGGAGGAGACATGGTGAACCAGAGCTTCATCTGCGACCCCGACGACGAGACCTTCATCAAAAACATTATTATCCAGGACTGTATGTGGAGCGGCTTCTCAGCCGCCGCCAAGCTC---------GTGTCAGAGAAGCTGGCCTCCTACCAGGCTGCGCGCAAAGACAGCGGCAGCCCGATTCCCGCCCGCGGG---------------------------------CACGGCGGCTACTCCACCTCCAGCTTGTACCTGCAGGACCTGAGCGCCGCCGCCTCCGAATGCATCGACCCCTCGGTGGTCTTCCCCTACCCGCTCAACGACAGCAGCTCGCCCAAGCCCTGCGCCTCCCCCGACTCCACCGCCTTCTCCCCGTCCTCGGACTCTCTGCTCTCCTCCGCCGAGTCCTCCCCACGGGGCAGTCCCGAACCCTTGGCTCTCCACGAGGAGACACCACCCACCACCAGCAGCGACTCTGAGGAGGAACAAGAAGATGAGGAAGAAATTGATGTTGTTTCTGTGGAAAAGAGGCAGCCCCCTGCCAAAAGGTCGGAATCG---GGGTCACCCTCTGCTGGAGGCCACAGCAAACCTCCTCACAGCCCCCTGGTCCTTAAGAGATGCCATGTGTCCACGCACCAGCACAATTATGCAGCGCCCCCCTCCACCAGGAAGGACTATCCCTCTGCCAAGAGGGCTAAGTTGGACAGTGGCAGGGTCCTGAAACAGATCAGCAACAACCGAAAATGCGCCAGCCCCAGGTCC---------TCGGACACGGAGGAGAATGACAAGAGGCGGACACACAATGTCTTGGAACGCCAGAGGAGAAACGAGCTGAAACGCAGCTTTTTTGCCCGTCGAGACCAGATCCCAGAGTTGGAGAACAATGAAAAAGCCCCCAAGGTAGTTATCCTTAAAAAAGCCACAGCTTACATCCTGTCTGTCCAAGCAGAGGAGCAAAAGCTCGTGTCAGAAAAAGACGTGCTGCGGAAGAGGCGAGAACAGTTGAAACTCAAACTTGAACAGCTACGGAACTCTTGCCCATAA Sylvilagus_floridanus ATGCCCCTCAACGTCAGCTTCGCCACCAACAGGAACTATGACCTGGACTACGACTCGGTGCAGCCCTATTTCTACTGCGATGAGGAGGAG---AACTTCTAC------CAGCAGCAGCAGCAGAGCGAGCTGCAGCCGCCGGCGCCCAGCGAGGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCCCTGTCCCCGAGCCGCCGCTCCGGCCTCTGCTCGCCCTCCTACGTTGCCGTC---GCGTCCTTCTCCCCCAGGGGAGACGACGGCGGCGGCGGCGGCAGCTTCTCCACGGCTGACCAGCTGGAGATGGTCACCGAGCTGCTGGGCGGTGACATGGTGAACCAGAGCTTCATCTGCGACCCGGACGACGAGACCTTCATCAAGAACATCATCATCCAGGACTGCATGTGGAGCGGCTTCTCGGCCGCCGCCAAGCTG---------GTCTCGGAGAAGCTGGCCTCCTACCAGGCTGCGCGCAAGGACAGCAGCAGCCCGAGCCCCGCCCGCGTC---------------------------------CACGGCGGCTGCTCCACCTCCAGCCTGTACCTGCAGGACCTGAACGCCGCCGCCTCCGAATGCATCGACCCCTCGGTGGTCTTCCCCTACCCACTGCACGACAGCAGCTCGCCCAAGCCCTGCGCCTCGCCCGAATCCAGCGCCTTCTCCCCGTCCTCGGACTCTCTGCTCTCCTCCAACGAGTCCTCTCCGCGGGCCAGCCCTGAGCCCCTGGTGCTCCATGAAGAGACACCGCCCACCACCAGCAGCGACTCTGAGGAAGAACAAGAGGATGAGGAAGAAATCGATGTCGTTTCTGTGGAAAAGAGGCAGCCCTCCACCAAAAGGTCA---------GGGTCACCATCTGCAGGGGGCCACAGCAAACCTCCACACAGCCCGCTGGTCCTCAAGAGGTGCCACGTCTCCACCCATCAGCACAATTACGCCGCGCCCCCATCCACCAGGAAGGACTACCCAGCTGCCAAGCGGGCCAAGTTGGACAGTGGCCGAGTCCTGAAGCAGATCAGCAACAATCGCAGATGCGCCAGCCCCAGGTCC---------TCAGACACCGAGGAGAACGACAAGAGGCGGACACACAACGTCTTGGAACGCCAGAGGAGAAATGAGCTGAAAAGGAGCTTTTTTGCCCTGCGTGACCAGATCCCAGAGTTGGAAAACAATGAAAAGGCCCCCAAGGTAGTTATCCTTAAAAAAGCCACAGCATACATCCTGGCCGTCCAAGCGGAGGAGCAAAAGCTCGTTTCGGAGAAGGACTTGTTGCGGAAACGGCGAGAGCAGTTGAAACACAAACTTGAACAGCTACGGAACTCTTGTGCATGA Tadarida_brasiliensis ATGCCCCTCAACGTCAGCTTCGCC---AACAGGAACTATGACCTCGACTACGACTCAATGCAGCCCTATTTCTTCTGCGACGAGGAAGAG---AACTTCTAC------CACCAACAGCAGCAGAGCGAGCTGCAGCCGCCGGCGCCCAGCGAAGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCCCTTTCGCCGAGCCGCCGCTCGGGACTTTGCTCGCCCTCCTACGTCGCGTTC---GCTTCCTTCTCACCCAGGGACGTTGACGACGGCGGTGGCGGCAGCTTTTCCACCGCAGACCAGTTGGAGATGGTGACCGAGCTGCTGGGAGGAGACATGGTGAACCAGAGCTTCATCTGCGACCCGGACGATGAGACCTTCATCAAAAACATCATCATCCAGGACTGTATGTGGAGCGGCTTCTCGGCCGCCGCCAAGCTT---------GTCTCAGAGAAGCTGGCCTCCTACCAGGCAGCGCGCAAAGACGGCGGCGGCCGGAGCCCCGCCCGAGGG---------------------------------CAAGGCGCCTGCTCCACCTCCAGCCTGTACCTGCAGGACCTGAGCGCGGCAGTCTCCGAGTGCATCGACCCCTCCGTGGTCTTCCCCTACCCGCTCAACGACAGCAGTTCGCCCAAGCCCTGCGCCTCCCCCGACTCCACCGCCTTCTCCCCGTCCTCGGACTCTCTGCTCTCCTCGGCCGCCTCCTCCCCAAGGGCCAGCCCCGAGCCCCTGGCACTCCACGAGGAGACACCACCCACCACCAGCAGTGACTCCGAGGAAGAACAGGAGGATGAGGAAGAAATTGATGTTGTTTCTGTGGAAAAGAGGCAGCCCCCTGCCAAAAGGTCAGAATCG---GGGTCACCATCTGCCGGAAGTCACAGCAAACCTCCTCACAGCCCACTGGTCCTTAAGAGATGCCATGTGTCCACCCATCAGCACAATTACGCAGCACCCCCCTCCACTAGGAAGGACTATCCTCCCACCAAGAGGGCTAAGTTGGACAGTGGCCGAGTCCTGAAACAGATCAGCAACAACCGCAAGTGCGCCAGCCCCAGGTCC---------TCCGACTCAGAGGAGAATGACAAGAGGCGGACGCACAACGTCTTAGAGCGCCAGAGGAGAAACGAGCTGAAACGCAGCTTTTTTGCCCTGCGCGACCAGATCCCTGAGTTGGAAAACAATGAAAAGGCCCCCAAGGTAGTCATCCTTAAAAAAGCCACCGCGTACATCCTGGCCATCCAAGCGGAGGAGCAGAAGCTCATTTCAGAAAAGGACTTATTGCGAAAACGACGAGAACAGTTGAAACACAAACTTGAACAGCTACGGAACTCTTGTGCATAA Tupaia_glis ATGCCCCTCAACGTCAGCTTCGCC---AGCAGGAACTATGACCTCGACTACGACTCGGTGCAGCCCTATTTCTACTGCGACGAGGAGGAG---AACTTCTAC------CAGCAGCAGCAGCAGAGCGAGCTGCAGCCGCCCGCGCCCAGCGAGGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCCCTGTCACCCAGCCGCCGCTCCGGGCTCTGCTCGCCCTCCTACGTAGCCGTC---GCGTCCTTCTCCCCCAGGGGAGACGACGACGGCGGCGGCGGCAGTTTCTCCACCGCCGACCAGCTGGAGATGGTGACCGAGCTGCTGGGAGGAGACATGGTGAACCAGAGCTTCATCTGCGACCCGGACGACGAGACCTTCATCAAGAACATCATCATCCAGGACTGTATGTGGAGCGGCTTCTCCGCCGCCGCCAAGCTG---------GTCTCCGAGAAGCTGGCCTCCTACCAGGCTGCGCGCAAAGACAGCGGCAGCCCGAGCCCCGCCCGCGGG---------------------------------CACAGCGGCTGCTCCACCTCCAGCTTGTACCTGCAGGACCTGAGCGCCGCCGCCTCCGAGTGCATCGACCCCTCGGTAGTCTTCCCCTACCCGCTCAACGACGGCAGCTCGCCCAAGCCCTGCGCCTCGCCGGACTCCACCGCCTTCTCCCCGTCCTCGGACTCCCTGCTCTCCTCCACGGAGTCCTCTCCGCGGGCCAGCCCCGAGCCCCTGGCGCTCCACGAGGAGACACCTCCCACCACCAGCAGCGACTCTGAGGAAGACCAAGAGGATGAGGAAGAAATTGATGTCGTTTCTGTAGAAAAGAGGCAGCCTCCTACCAAAAGGTCGGAATCG---GGGTCACCCTCCGCTGGAGGCCACAGCAAACCCCCTCACAGTCCACTGGTTCTCAAGAGGTGCCATGTCTCCACCCATCAGCACAATTACGCGGCGCCGCCCTCCACCAGGAAGGACTACCCAGCTGCCAAGAGGGCTAAGCTGGACAGTGGCAGAGTCCTGAAACAGATCAGCAACAACCGGAAATGTGCCAGCCCCAGGTCC---------TCAGACACCGAGGAGAATGACAAGAGGCGGACACACAATGTCCTGGAACGCCAGAGGCGAAACGAGCTGAAACGAAGCTTTTTTGCTCTGCGTGACCAGATCCCCGAGTTGGAAAACAATGAAAAGGCCCCCAAAGTAGTTATCCTTAAAAAAGCCACAGCGTACATCCTGTCTGTTCAAGCAGAGGAGCAAAAGCTCATTTCAGAAAAGGATTTGTTAAGGAAGCGGCGAGAACAGTTGAAACACAAACTTGAACAGCTACGGAACTCTTGTGCATAA ; END; BEGIN TREES; Title 'c-Myc ML analysis'; LINK Taxa = Taxa; TRANSLATE 1 Callithrix_jacchus, 2 Canis_familiaris, 3 Cynocephalus_variegatus, 4 Felis_silvestris, 5 Gallus_gallus, 6 Gorilla_gorilla, 7 Homo_sapiens, 8 Hylobates_lar, 9 Marmota_monax, 10 Mus_musculus, 11 Ovis_aritis, 12 Pan_troglodytes, 13 Pongo_pygmaeus, 14 Pteropus_hypomelanus, 15 Rattus_norvegicus, 16 Serinus_canaria, 17 Sus_scrofa, 18 Sylvilagus_floridanus, 19 Tadarida_brasiliensis, 20 Tupaia_glis; TREE PAUP_1 = ((5:0.014437,16:0.134029):0.278261,((9:0.054286,(10:0.029837,15:0.021416):0.096345):0.004725,(20:0.041348,((1:0.034761,(8:0.009017,(13:0.004847,(6:0.005633,(7:0.001598,12:8.0E-4):7.87E-4):0.002457):7.13E-4):0.017098):0.037383,((3:0.039208,18:0.056098):0.0,((11:0.040525,17:0.032039):0.017584,((2:0.034388,4:0.02884):0.011932,(14:0.025018,19:0.050257):0.020375):0.0028):0.011855):0.002599):0.002067):0.00213):0.278261); END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 1389; END; BEGIN CODONS; CODONPOSSET * UNTITLED = 1: 1 - 1387\3, 2: 2 - 1388\3, 3: 3 - 1389\3; CODONPOSSET CodonPositions = 1: 1 - 1387\3, 2: 2 - 1388\3, 3: 3 - 1389\3; CODESET * UNTITLED = universal: 1 - 1389; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1389; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1308246062169; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 1958682533108768146; tell It; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 1052839958168604684; tell It; attachments ; endTell; mqVersion 273; checksumv 0 2 1485800224 null getNumChars 1389 numChars 1389 getNumTaxa 20 numTaxa 20 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 416477.0 sumSquares -4.611686018427348E18 NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 273; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 956 601; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; getEmployee #mesquite.trees.ManageTrees.ManageTrees; tell It; getTreeBlock 0; tell It; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #1052839958168604684 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 0 -67; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; getWindow; tell It; forceAutosize; endTell; hideWindow; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.pPod.LiveMatrixStatus.LiveMatrixStatus; tell It; togglePanel off; endTell; getEmployee #mesquite.provenance.ProvenanceBrowserCME.ProvenanceBrowserCME; tell It; togglePanel off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;