#NEXUS Begin trees; [Treefile saved Monday, November 7, 2011 11:52 AM] [! >Data file = GONHAPs >Heuristic search settings: > Optimality criterion = parsimony > Character-status summary: > 295 characters are excluded > Of the remaining 125 included characters: > All characters are of type 'unord' > All characters have equal weight > All characters are parsimony-informative > Gaps are treated as "missing" > Starting tree(s) obtained via stepwise addition > Addition sequence: random > Number of replicates = 100 > Starting seed = 390041202 > Number of trees held at each step during stepwise addition = 1 > Branch-swapping algorithm: tree-bisection-reconnection (TBR) > Steepest descent option not in effect > Initial 'MaxTrees' setting = 1000 > Branches collapsed (creating polytomies) if maximum branch length is zero > 'MulTrees' option in effect > Topological constraints not enforced > Trees are unrooted > >Search terminated prematurely (no room to store new trees) > 1000 trees retained > Time used = 00:01:06.2 ] Translate 1 Haplonyx_FJ888591, 2 Gonipterus_platensis_co1_FJ888530, 3 Gonipterus_platensis_co2_FJ888529, 4 Gonipterus_platensis_co3_JN3191478, 5 Gonipterus_platensis_ESP_JN3191479, 6 Gonipterus_platensis_POR_JN3191480, 7 Gonipterus_pulverulentus_co4_FJ888531, 8 Gonipterus_pulverulentus_co5_FJ888532, 9 Gonipterus_pulverulentus_co6_FJ888533, 10 Gonipterus_sp_n_1_co7_FJ888534, 11 Gonipterus_sp_n_1_co8_FJ888535, 12 Gonipterus_sp_n_1_co9_FJ888536, 13 Gonipterus_sp_n_1_co10_FJ888537, 14 Gonipterus_sp_n_1_co11_FJ888538, 15 Gonipterus_sp_n_2_co12_FJ888539, 16 Gonipterus_sp_n_2_co13_FJ888540, 17 Gonipterus_sp_n_2_co14_FJ888541, 18 Gonipterus_sp_n_2_co15_FJ888542, 19 Gonipterus_sp_n_2_co16_FJ888543, 20 Gonipterus_sp_n_2_co17_FJ888544, 21 Gonipterus_sp_n_2_co18_FJ888545, 22 Gonipterus_sp_n_2_co19_FJ888546, 23 Gonipterus_sp_n_2_co20_FJ888547, 24 Gonipterus_sp_n_2_co21_FJ888548, 25 Gonipterus_sp_n_2_co22_FJ888549, 26 Gonipterus_sp_n_2_co23_FJ888550, 27 Gonipterus_sp_n_2_co24_FJ888551, 28 Gonipterus_sp_n_2_co25_FJ888552, 29 Gonipterus_sp_n_2_co26_FJ888552, 30 Gonipterus_sp_n_2_co27_FJ888553, 31 Gonipterus_sp_n_2_co28_JN3191481, 32 Gonipterus_sp_n_2_co29_JN3191482, 33 Gonipterus_sp_n_2_co30_JN3191483, 34 Gonipterus_sp_n_2_RSA_JN3191484, 35 Gonipterus_sp_n_2_co31_JN3191485, 36 Gonipterus_sp_n_3_co32_FJ888557, 37 Gonipterus_sp_n_3_co33_FJ888558, 38 Gonipterus_sp_n_3_co34_FJ888559, 39 Gonipterus_sp_n_3_co35_FJ888560, 40 Gonipterus_sp_n_3_co36_FJ888561, 41 Gonipterus_sp_n_3_co37_FJ888562, 42 Gonipterus_sp_n_3_co38_FJ888563, 43 Gonipterus_sp_n_3_co39_FJ888564, 44 Gonipterus_sp_n_3_co40_FJ888565, 45 Gonipterus_sp_n_3_co41_FJ888566, 46 Gonipterus_sp_n_4_co42_FJ888568, 47 Gonipterus_sp_n_4_co43_FJ888569, 48 Gonipterus_baltentus_co44_FJ888567, 49 Gonipterus_notographus_co45_FJ888570, 50 Gonipterus_notographus_co46_FJ888571, 51 Gonipterus_notographus_co47_FJ888572, 52 Gonipterus_notographus_co48_FJ888573, 53 Gonipterus_notographus_co49_FJ888574, 54 Gonipterus_notographus_co50_FJ888575, 55 Gonipterus_notographus_co51_FJ888576, 56 Gonipterus_notographus_co52_FJ888577, 57 Gonipterus_notographus_co53_FJ888578, 58 Gonipterus_notographus_co54_FJ888579, 59 Gonipterus_notographus_co55_FJ888580, 60 Gonipterus_notographus_co56_FJ888581, 61 Gonipterus_notographus_co57_FJ888582, 62 Gonipterus_notographus_co59_FJ888584, 63 Gonipterus_notographus_co60_FJ888585, 64 Gonipterus_notographus_co61_FJ888586, 65 Gonipterus_notographus_co62_FJ888587, 66 Gonipterus_sp_n_5_co63_FJ888588, 67 Gonipterus_sp_n_5_co64_FJ888589, 68 Gonipterus_scutellatus_co65_JN3191486, 69 Oxyops_co66_FJ888590, 70 Oxyops_co67_JN3191487 ; tree PAUP_1 = [&U] (1,((((((((2,3,4),(5,6)),(7,(8,9))),48),((((10,(12,14),13),11),(((((((((((15,16),19),17,18),((20,35),(21,22),34)),29),(30,33)),23),(((24,(25,31)),27),26)),32),28),(((36,44),45),((((37,43),(38,40),42),41),39)))),68)),((46,47),(((((49,((50,(((51,58),(61,63)),62)),55)),((52,56),57)),((54,60),(59,65))),64),53))),(66,67)),(69,70))); tree PAUP_BS = [&U] (1:0,((((((2:100.000000,3:100.000000,4:100.000000,(5:100.000000,6:100.000000):71.270813):75.527000,(7:100.000000,(8:100.000000,9:100.000000):90.764999):84.552002):80.000000,((((10:100.000000,12:100.000000,13:100.000000,14:100.000000):71.893379,11:100.000000):94.442383,(((15:100.000000,16:100.000000,17:100.000000,18:100.000000,19:100.000000,(20:100.000000,29:100.000000,35:100.000000):61.000000,21:100.000000,22:100.000000,23:100.000000,24:100.000000,25:100.000000,26:100.000000,27:100.000000,30:100.000000,31:100.000000,32:100.000000,33:100.000000,34:100.000000):68.000000,28:100.000000):85.000000,((((36:100.000000,44:100.000000):68.563652,45:100.000000):98.943748,((37:100.000000,43:100.000000):67.000000,(38:100.000000,40:100.000000):85.708000,41:100.000000,42:100.000000):73.104065):74.092026,39:100.000000):100.000000):64.500000):84.872002,68:100.000000):94.000000,48:100.000000):77.277000,(46:100.000000,47:100.000000):100.000000,((((49:100.000000,(52:100.000000,56:100.000000):92.707382,(54:100.000000,(59:100.000000,65:100.000000):51.503979,60:100.000000):57.493595,57:100.000000,64:100.000000):51.000000,50:100.000000,55:100.000000):56.741001,51:100.000000,58:100.000000,(61:100.000000,63:100.000000):59.780998,62:100.000000):80.233765,53:100.000000):100.000000):89.000000,(66:100.000000,67:100.000000):100.000000):96.000000,(69:100.000000,70:100.000000):100.000000):100.000000); tree PAUP_BAYES = [&U] (1,((((((2,3,4,5,6),(7,(8,9))),(((((10,(12,14),13),11),((((15,16,((17,18),19)),((20,29,35),(21,22),34),23,(((24,25),27),26),(30,31,33),32),28),(((36,44),45),(37,43),(38,40),39,41,42))),68),48)),(46,47)),((((((((49,((((52,56),55),57),((54,(59,65)),60))),64),50),(61,63),62),58),51),53),(69,70))),(66,67))); End;