#NEXUS [written Tue Sep 06 12:07:59 CEST 2011 by Mesquite version 2.74 (build 550) at btb5kd/132.180.63.113] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=34; TAXLABELS Gisekia_africana Gisekia_pharnacioides Brownanthus_pubescens Carpanthea_pomeridiana Drosanthemum_speciosum Mesembryanthemum_aitonis Aizoon_asbestinum Aizoon_canariense Galenia_africana Galenia_sp_HH_34679 Plinthus_karooicus Tetragonia_fruticosa Tribulocarpus_retusus_Thulin_10511 Tribulocarpus_dimorphanthus_South_Africa Tribulocarpus_dimorphanthus_Thulin_5343 Tribulocarpus_dimorphanthus_Thulin_11226 Cypselea_humifusa Sesuvium_portulacastrum Sesuvium_sesuvioides Sesuvium_verrucosum Trianthema_megasperma Trianthema_patellitecta Trianthema_pilosa Trianthema_portulacastrum Trianthema_rhynchocalyptra Trianthema_clavata Trianthema_parvifolia_HH_25483 Trianthema_parvifolia_HH_34443 Trianthema_salsoloides Trianthema_sedifolia Trianthema_sheilae Trianthema_ufoensis Zaleya_galericulata Zaleya_pentandra ; END; BEGIN CHARACTERS; TITLE 'Tribulocarpus, reduced dataset, rps16'; DIMENSIONS NCHAR=1188; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Gisekia_africana ATATCCATCATTCTC-TAATAAAGGATGCTCTTGACTCGACATCCTTTGTTCTGTTTCACTCGAACCCGCATTTA--------------TTGTTGG-----GGTAGAATGAAA-ATAATACATGAT-----GGAGCTCGAGCAGAAAGT-----ATTGATTCATTTCTCAAGGGAG-AGGGG----TCTAGGGTTAGTGTCAATCAATAAGATGGAACAACTTCGTAAGTATA------TCTTTG------ACAGAGAAATCGAAAAGGTCC----AAATCTAGCAAGTTTCAAATCCC-----------AAAAGAAATTTAAAATT-TTGTT----GT-----AATTGATAAAA---------ACCCTTTT-CGATAAAAAAATTCTAAATTGATATAATAGAATTGATATCATATCGTGCGGGAAT---CC-GCCGCTCATATGATT----CTATTCTTT-------------------GATAGAAATAAATAACAAAAAAGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACCC---TTTG----------------------------------------------------TATTTTAA-----TTGTT----ACAACAAT-------TGGATTTG--------GATCCGAAT------------TCCAATCGATTTG-----------AAATAAGAC------ATAT----------------------TAAA---AAAGGGTATT-GAGACTACTCAATAAACG----AAATGCCAAAGGATTTTTGTTT--GAGCTATTTAATAGTTATTGAACTTGAGTTATGAGTATACAAATGATTTTTTT---------------AGGAAAGAAAATGA-AGAAAA-AAGGGA---TTTAAATTTTAGTAGAATTCATTTGAT----GATTTTCGAGACTTATTTT------ATTTTTAATTGGCTGTTCAAATGTCTATA-------------------CTA-------------------------TAGACATAACTTC-AATCATTTTCTTTTTCTCGAGCCGTACGAGGAAAAAACTTCCTATACGGTTCCAGGGGGGGTTATTGTTG Gisekia_pharnacioides ATATCCATCATTCTC-TAATAAAGGATGCTCTTGACTCGACATCCTTTGTTCTGTTTCACTCGAACCCGCATTTA--------------TTGTTGG-----GGTAGAATGAAA-ATAATACATGAT-----GGAGCTCGAGCAGAAAGT-----ATTGATTCATTTCTCAAGGGAG-AGGGG----TCTAGGGTTAGTGTCAATCAATAAGATGGAACAACTTCGTAAGTATA------TCTTTG------ACAGAGAAATCGAAAAGGTCC----AAATCTAGCAAGTTTCAAATCCC-----------AAAAGAAATTTTAAATT-TTGTT----GT-----AATTGATAAAA---------ACCCTTTT-CGATAAAAAAATTCTAAATTGATATAATAGAATTGATATCATATCGTGCGGGAAT---CC-GCCGCTCATATGATT----CTATTCTTT-------------------GATAGAAATAAATAACAAAAAAGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACCC---TTTG----------------------------------------------------TATTTTAA-----TTGTT----ACAACAAT-------TGGATTTG--------GATCCGAAT------------TCCAATCGATTTG-----------AAATAAGAC------ATAT----------------------TAAA---AAAGGGTATT-GAGACTACTCAATAAACG----AAATGCCAAAGGATTTTTGTTT--GAGCTATTTAATAGTTATTGAACTTGAGTTATGAGTATAAAAATGATTTTTTT---------------AGGAAAGAAAATGA-AGAAAA-AAGGGA---TTTAAATTTTAGTATAATTCATTTGAT----GATTTTCGAGACTTATTTTATTTTTATTTTTAATTGGCTGTTCAAATGTCTATA-------------------CTA-------------------------TAGACAAAACTTCGAATCATTTTCTTTTTCTCGAGCCGTACGAGGAAAAAACTTCCTATACGGTTCCAGGGGGGGTTATTGTTG Brownanthus_pubescens ATATCCATCATTCTA-TAATAAGGGATGCTCTTAACTCGACGTCCGTTGTTCTGTTTCAATCGAACCCGCATTTAAAAATTTTATCTTTTTATTGG-----GGTGTAAGGGAA-AGAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAGGGAG-AAGGG----TCTAGGGTTAGTGTCAATCAATAAGTTGGAACAACTTCGTAAGTATA------TCTTTG------ACAGAGAAATCGAAAGGATTC----AAATCAATCAAGTTTCAAATCCC-----------CAAGGAAATTTTG-----TT-------GG-----AATTGATAAAA---------AACCTTTT-CGATAAAAAG----AAAA-TGATAT----------ATAT-----CGTGTGGGAATACGC--GCCGCCCATATGATT----CTATTCTTT-------------------GATAGAAAGAAATAACAAAAAAGGTATGTTGCTGCCGTTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGAAAGATAAAAGATTCCGGAACAAGGAA-ACACCC--CTTT-----------------------------------------------------TTTTTC-------TTGTC----GCAACAAT-------TGGATTTG--------GATCAGAATGCAGGAT-----TCAAATCGATTCT-----------AAATGAGAC------ATATAAATGAGATATATATAT-AATATAAATATAAGGGGTATTTGAGACTGCTCAATAAATG----AAATGCCAAAGAGTTTTCTTTT--GAGCTATTTGAGAGTTATTCAACTTGAGTTATGAGTACACAAATGATTTTTTTTT-------------AGGAAAGAAAAAGA-AGAAA--AAGGA----CTTAATTCTTAGTCTAATTTATTTGAT---T-ATTTTAGGGACTTAG-------------TTAAT--GCCATTCAATTTTATATA--TACA----------TAACT--------------------------------TCCCTTCGAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Carpanthea_pomeridiana ATATCCATCATTCTA-TAATAAGGGATGCTCTTAACTCGACGTCAGCTATCCTGTTCCATTCGAACCCGTATTTCAAAAACT------TTTATTGGATTGGGGTGTAATGGAA-AGAGTACATGAT-----GGAGCTCGGGTAGAAAGTCAAGTATTGATTTATTTCTCAAGGGAG-AAGGG----TCTAGGGTTAGTGTCAATCAATAAGTTGGAACAACTTCGTAAGTATA------TCTTTG------ATAGAGAAATCGAAAGGATTC----AAATCAATCAAGTTCCAAATCCC-----------AAAGGAAATTTTC-----TT-------GGG-----ATTGATAAAAA--------AACCTTTT-CGAGAAAAAG----AAAA-TGATAT----------ATAT-----CGTGTGGGAATACGCGCGTCACCCATACGATT----CTATTCTTT-------------------GATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCGTTTTTGAAAGGATGAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAATAAAGATAAAAGATTCCGGAACAAGGAA-ACACTCC-CTTTT----------------------------------------------------TTTATT---------GTC----GCAACAAT-------TGGATTTG--------GATCAGAATGCCGGAT-----TCAAATCGATTCG-----------AAATGGGAC------ATATA-------------TAT-AAAATAA------AGGGTATTTGAGACTGCTCAATAAATG----AAATGCCAAAGGGTTTTCTTTT--GAACTATTTGAGAGTTATTCAACTTGAGTTATGAGTATACAAATGATTTTTTTT--------------AGGAAAGAAAAAGT-TGGAA--TTAG--------AATTCGTTTTCTTATT--TTAGGGGCTTCATTTTAGGGACTTAG-------------TTAATTTGCCGTTATAATTTATATA--TACA-----------------------------------------------TAACTTCGAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACCTCCTATACGTTTCCAGGGGGGGTTATTGTTG Drosanthemum_speciosum ATATCCATCATTCTA-TAATAAAGGATGCTCTTAACTCGACGTCCGTTGTCCTGTTCCACTCGAACCCGGATTTCACAATTT------TTTATTGG-----GGTTTAATGGAA-AGAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAGGGGA-AGGGG----TCTAGGGTTAGTGTGAATCAATAAGTAGGAACAACTTCGTAAGTATA------TCTTTG------ATAGAGAAATCGAAAGGATTCAAACCAATCAAGCAAGTTTCAAATCCC-----------AAAGGAAATTTTC-----TT-------GGG-----ATTGATAAAAA--------AACCTTTT-CGAGAAAAAG----AAAA-TGATAT----------ATAT---ATCGTGTGGGAATATGC--GTCACCCATATGATT----CTATTCTTT-------------------GATAGAAAGAAATAACAAAAA-GGTATGTTGCTGCCGTTTTTGAAAGGATGAAAAATCAACGAAGTAATGTCTAAACCTAATGATTCAAAACAAAGAAAGAGAAAAGATTCCGGAACAAGGAA-ACACCCCCTTTTTTA---------------------------------------------------------------TTGTCGCAACAAACAAT-------AGGGTTTG--------GATCGGAATGCAGGAT-----TCAAATCGATTCT-----------AAATGAGAC------ATAAA---G-G-----------AA-----------AGGGTATTTGAGACTGCTCAATAAATG----AAATGCCAAA-----TTCTTTT--GAGCTATTTGAGCGTTATTCCACTTGAGTTATGAGTATACAAATGATTTTTTTT--------------AGGAAAGAAAAAGA-AGAAAAGTTGGA----ATTAG----------AATTCATTT--T-CTT-ATTTTAGGGACTAAG-------------TGAATTTGCCATTCTAATTTATATA--TACA-----------------------------------------------TAACTTCGAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Mesembryanthemum_aitonis ?????????AAT-TA-TAATAAGGGATGCTCTTAACTCGACGTCCGTTGTTCTGTTTCACTCGAACCCGCATTTAAAAATTGGATCTTTTTATTGG-----GGTGTAAGGGAA-AGAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTTATTTCTCAAGGGAG-AAGGG----TCTAGGGTTAGTGTCAATCAATAAGTTGGAACAACTTCGTAAGTATATGTATATCTTTG------ACAGAGAAATCGAAAGGATTC----AAATCAATCAAGTTTCAAATCCC-----------AAAGGAAATTTTG-----TT-------GG-----AATTGATAAAAA--------AACCTTTT-CGATAAAAAG----AAAA-TGATAT----------ATAT-----CGTGTGGGAATACGC--GCCGCCCATATGATT----CTATTCTTT-------------------GATAGAAAGAAATAACAAAAAAGGTATGTTGCTGCCGTTTTTGAAAGGATTCAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGAAAGATAAAAGATTCCGGAACAAGGAA-ACACC---CTTTT----------------------------------------------------TTTAT---------TGTC----GCAACAAT-------TGGATTTG--------GATCAGAATGCAGGAT-----TCAAATCAATTCT-----------AAATGAGAC------ATATAAATGAGACATATATAT-AA-----------GGGGTATTTGAGACTGCTCAATAAATG----AAATGCCAAAGGGTTTTCTTTT--GAGCTATTTGAGAGTTATTCAACTTGAGTTATGAGTATACAAATGATTTTTTTTT-------------AGGAAAGAAAAAGA-AGAAA--AAGGA----CTTAATTCTTAGTCTAATTCATTTGAT---T-ATTTTAGGGACTTAA-------------TTAATTTGCCATTCAAATTTATATA--TACA-----------------------------------------------TAACTTCGAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTG??? Aizoon_asbestinum ATATCCATCATTCTA-TAATAAAGGATGCTCTTGACTCGACATCCGTTGTTCTGTTCCACTAGAACCCGCATTT--------------TTTAGTGG-----TGTGTAATGGAA-AAAGTACATGAT-----GGAGCTCGAGTAGAAAAT-----ATTGATTCATTTCTCAAGGGAG-AAGGG----TCTAGGGTTAGTGTCAATCAATAAGTTGGAACAACTTCGTAAGTATA------TCTTTG------ACAGAGAAATCGAAAGGATCC----AAATCAATCAAGTTTCAAATCCC-----------AAAGGAAATTTTG-----TT-------GGATTGGAATTGATAAAA---------AACCTTTT-CGATAAAAA-----AAA--TGATAT----------ATAT-----CGTGCGGGAATATGC----TGTCCGTATGATT----CTAGTCTTT-------------------GATAGAAAGAAATAACAAAAA-GGTATGTTGCTGCCGTTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGAAAGATAAAAGATTCCGGAACAAGGAA-ACACC---CTTTA--------------------------------------A-------TAATTATTTATTATTTAAATTGCC----GCAACAAT-------TGGATTTG--------GATCAGAATGAAGGAT-----TCAAATCGATTCG-----------AAATGAGAC------ATATAAAT-------ATTTAT-AAATATGA----AAGGGTATTTGAGACTGCTCAATAAATG----AAATGCCAAAGGATTTTCTTTT--GAGCTATTTGAGAGTTATTCAACTTGAGTTATGAGTATACAAATGATTTTTTTT--------------AAGAAAGAAAAAGA-CGAAA--AAGGA----CTTAATTCTTCGTCTAATTCATTTGATTGATGATTTTAGGGACTTAT-------------TTAATTTGCCATTCTAATTTATATA----------------------------TTTATATA-----------TATACCTAACTTCGAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTAGTGTTG Aizoon_canariense ATATCCATCATTCTA-TAATAAAGGATGCTCTTGACTCGACATCCGTTGTTCTGTTCCACTAGAACCCGCATTT--------------TTTAGTGG-----TGTGTAATGGAA-AAAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAGGGAG-AAGGG----TCTAGGGTTAGTGTCAATCAATAAGTTGGAACAACTTCGTAAGTATA------TCTTTG------ACAGAGAAATCGAAAGGATCC----AAATCAATCAAGTTTCAAATCCC-----------AAAGGAAATTTTG-----TT-------GGATTGGAATTGATAAAA---------AACCTTT--CGATAAAAA-----AAAA-TGATAT----------ATAT-----CGTGCGGGAATATGC----TGTCCGTATGATT----CTAGTCTTT-------------------GATAGAAAGAAATAACAAAAAAGGTATGTTGCTGCCGTTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGAAAGATAAAAGATTCCGGAACAAGGAA-ACACC---CTTTA--------------------------------------A-------TAATTATTTATTATTTTAATTGCC----GAAACAAT-------TGGATTTG--------GATCAGAATGAAGGAT-----TCAAATCGATTCG-----------AAATGAGAC------ATATAA-----------------------------AGGGTATTTGAGACTGCTCAATAAATG----AAATGCCAAAGGATTTTCTTTT--GAGCTATTTGAGAGTTATTCAACTTGAGTTATGAGTATACAAATGATTTTGTTT--------------AAGAAAGAAAAAGA-CGAAA--AAGGA----CTTAATTCTTCGTCTAATTCATTTGAT----GTTTTTAGGGACTTAT-------------TTAATTTGCCATTCTAATTTATATA-----------------------------------------------TATACCTAACTTCGAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAAGGGGGGTTAGTGTTG Galenia_africana ATATCCATCATTCTA-TAATAAAGGATGCTCTTGACTCGACATCCGTTGTTCTGTTCCACTAGAACCCGCATTT--------------TTTAGTGG-----TGTGTAATGGAA-AAAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAGGGAG-AAGGG----TCTAGGGTTAGTGTCAATCAATAAGTTGGAACAACTTCGTAAGTATA------TCTTTG------ACAGAGAAATCGAAAGGATCC----AAACCAATCAAGTTTCAAATCCA-----------AAAGGAAATTTTG-----TT-------GGATTGGAATTGATAAAA---------AACCTTT--CTATAAAAA-----AAA--TGATAT----------ATAT-----CGTGCGGGAATATGC----TGTCCGTATGATT----CTAGTCTTT-------------------GATAGAAAGAAATAACAAAAAAGGTATGTTGCTGCCGTTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGAAAGATAAAAGATTCCGGAACAAGGAA-ACACC---CTTTA--------------------------------------T-------TAATTATTTATTAATTGAATTGCC----GCAACAAT-------TGGAT--------------CAGAATGAAGGAT-----TCAAATCGATTCG-----------AAATGAGAC------ATATAA------------TAT-AA-----------AGGGTATTTGAGACTGCTCAATAAGTG----AAATGCCAAAGGATTTTCTTTT--GAGCTATTTGAAAGTTATTCAACTTGAGTTATGAGTATACAAATGATTTTGTTT--------------AAGAAAGAAAAAGA-CGAAA--AAGGA----CTTAATTCTTCGTCTAATTCATTTGAT----GATTTTAGGGACTTAT-------------TTAATTTGCCATTCTAATTTATATACATAAATTTA----------------TATTTATATA-----------TATACCTAACTTCGAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAAGGGGGGTTAGTGTTG Galenia_sp_HH_34679 ATATCCATCATTCTA-TAATAAAGGATGCTCTTGACTCGACATCCGTTGTTCTGTTCCACTAGAACCCGCATTT--------------TTTAGTGG-----TGTGTAATGGAA-AAAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAGGGAG-AAGGG----TCTAGGGTTAGTGTCAATCAATAAGTTGGAACAACTTCGTAAGTATA------TCTTTG------ACAGAGAAATCGAAAGGATCC----AAACCAATCAAGTTTCAAATCCC-----------AAAGGAAATTTTG-----TT-------GGATTGGAATTGATAAAA---------AACCTTT--CTATAAAAA-----AAA--TGATAT----------ATAT-----CGTGCGGGAATATGC----TGTCCGTATGATT----CTAGTCTTT-------------------GATAGAAAGAAATAACAAAAAAGGTATGTTGCTGCCGTTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGAAAGATAAAAGATTCCGGAACAAGGAA-ACACC---CTTTA-T----------------TAAT-TA------TT--TA-------------------TTAATTGAATTGCC----GCAACAAT-------TGGAT--------------CAGAATGAAGGAT-----TCAAATCGATTCG-----------AAATGAGAC------ATATAA---TATA---------------------AAGGGTATTTGAGACTGCTCAATAAGTG----AAATGCCAAAGGATTTTCTTTT--GAGCTATTTGAAAGTTATTCAACTTGAGTTATGAGTATACAAATGATTTTGTTT--------------AAGAAAGAAAAAGA-CGAAA--AAGGA----CTTAATTCTTCGTCTAATTCATTTGAT----GATTTTAGGGACTTAT-------------TTAATTTGCCATTCTAATTTATATACATAAATTTA----------------TATTTATATA-----------TATACCTAACTTCGAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAAGGGGGGTTAGTGTTG Plinthus_karooicus ????????????CTA-TA-TAAGGGATGCTCTTGACTC-ACATCCGTTGTTCTGTTCCACTAAAACCCGCATTT--------------TTTAGTGG-----TGTGTAATGGAA-AAAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAGGGA--AAGGG----TCTAGGGTTAGTGTCAATCAATAAGTTGGAACAACTTCGTAAGTATA------TCTTTG------ACA-A-AAATCGAAAGGATCC----AAATCAATCAAGTTTCAAATCCC-----------AAAGGAAATTTTG-----TT-------GGATTGGAATTGATAAAA---------AACCTTTT-CGATAAAAA-----AAA--TGAT-T----------ATAT-----CGTGCGGGAATATGC----TGTCCGTATGATT----CTAGTCTTT-------------------GATAGAAAGAAATAACAAAAA-GGTTTGTTGCTGCCGTTTTTGAAAGGATTAAAAATCAACGAAGTAATGCCTAAACCCAATGATTCAAAACAAAGAA-GATAAAAGATTCCGGA-CAAGGAA-ACACC---CTTTAATATAATATAATATAATATAATATA------AT-ATAATAT-AA--TAATTATTTATTATTTAAATTGCC----GC-ACAAT-------TGGATTTG--------GATCAGAATGAAGGAT-----TCAAATCGATTCG-----------AAATGAGAC------ATATAAA-----------TAT-TA----------AAGGGTATTTGAGACTGCTCAATAAATG----AAATGCCAAAGGATTTTCTTTT--GAGCTATTTGAGAGTTATTCAACTTGAGTTATGAGTATACAAATGATTTTTTTT--------------AAGAAAGAAAAAGA-CGAAA--AAGGA----CTTAATTCTTCGTCTAATTCATTTGATTGATGATTTTAGGGACTTAT-------------TTAATTTGCCATTCTAATTTATATATTAAAATTTA----------TA----TATTTATA-------------TATACCTAACTTCGAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTAGTGTTG Tetragonia_fruticosa ATATCCATCATTCTA-TAATAAAGGATGCTCTTGACTCGACATCCGTTGTTCTGTTCCACTAGAACCCCCATTT--------------TTTATTGG-----GGTGTAATGGAA-AAAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTTAAGGGAG-AAGGG----TCTAGGGTTAGTGGAAATCAATAAGTTGAAACAACTTCGTAAGTATA------TCTTTG------ACAGAGAAATCGAAAGGATCC----CAATCAATCAAGTTTCAAATCCC-----------AAAGGAAATTGTG-----TT-------GT-----AATTGATAAAA---------AACCCTTT-CGATAAAAA-----AAAA-TAATAT----------ATATCATATCGTGCGGGAAGCCGC------T-CATATGATT----CTATTCTTT-------------------GATAGAAAGAAATAACAAAAAAGGTATGTTGCTGCCGTTTTTGAAAGGATTCAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGAAAGATAAAAGATTCCGGAACAAGGAA-ACACC---CTTTCAA-------------------TTTA------AA-AT--------------------TGATTTTA-------------------------------------------TCAGAATGCAGGAT-----TTAAATTGATTCTAAAT-----------GAGAC------ATATA-------------TAT-AA-----------AGGGTATTTGAGACTGCTCAATAAATG----AAATGCCAAAGAATTTTCTTTT--GAGCTATTTGAGAGTTATTCAACTTGAGTTATGAGTATACAAATGATTTTTTTT--------------AAGAAAGAGAAAGA-CGAAA--AAGGA----CTTAATTCTTCGTCTAATTCATTTGAT----GATTTTAGGGACTTAT-------------TTAATTTGCCATTCTAATTTATATA--TACA----------TAACTA-------------------------TAGACATAACTTCGAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Tribulocarpus_retusus_Thulin_10511 ATATCCATCATTCTC-TACTAAAGGATGCTCTTGACTCGACATCCTTTGTTCTATTCCACGCGAACCCGCATTT--------------ATTGTTGG-----GGTGTAATGGAA-ATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAGGGAG-AAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGGAACAACTTCGTAAGTATA------TTTTTG------ACAGAGAAATCAAAAGGATCC----AAATCAATCAAGTTTCAAATTCC-----------AAAGGAAATTTTG-----TT-------GGAATTGATTTGATAAAA---------AACCTTTT-CGATAAAAA-----AAAA-TGATAT----------ATAT-----CGTGCGGGAATACGC----CGCGCATATGATT----CTATTCTTT-------------------GATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACC---CTTTATA------------------TTTTA------ATTATATTTAAATTTGAATTAT-----ATTTTAATTGTC----GCAACAAT-------TGGATTTG--------AATCAGAATGCAGAAT-----TCAAATTGATTCTATATTGATTCTAAATGAGACAGAGACATATAA-----------------------------AGGGTATCTGAGACTGCTCAAGAAATG----AAATGCCAAAGGATTTTCTTTT--GAGCTATTTGAGAGTTATTCAACTTGAGTTATGAGTATACAAATGATTTTCTTTTTTTTT--------AGGAAAGAAAAAGA-GGAAA--AAGGATTTACTTAATTCTTAGTCAAATTCATTTGAT----GATTTTAGGAACTTAT-------------TTAATTTGCTGTTATAATTTATATA---------------------------------------------------CATAACTTCGAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Tribulocarpus_dimorphanthus_South_Africa ATATCCATCATTCTC-TACTAAAGGATGCTCTTGACTCGACATCCTTTGTTCTATTCCACGCGAACCCGCATTT--------------TTTGTTGG-----GGTGTAATGGAA-ATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAGGGAG-AAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGGAACAACTTCGTAAGTATA------TCTTTG------ACAGAGAAATCGAAAGGATCC----AAATCAATCAAGTTTCAAATCCC-----------AAAGGAAATTTTG-----TT-------GGAATTGATTTGATAAAA---------AACCTTTT-CGATAAAAA-----AAA--TGATAT----------ATAT-----CGTGCGGGAATACGC---CCGCCCATATGATT----CTATTCTTT-------------------GATAGAAAGAAATAACAAAAAAGGTATGTTGCTGCCTTTTTTGAAAGGATTAAAATTCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGAAAGATAAAGGATTCCGGAACAAGGAA-ACACC---CTTTATA------------------TTTTA------AA-ATATT----T--TAATTAT-----ATTTTAATTGTC----GCAACAAT-------TGGATTTG--------GATCAGAATGCAGGAT-----TCAAATTGATTCTATATTGATTTTAAATGAGACA-----------------------TAT-AA-----------AGGGTATTTGAGACTGCTCAA-AAATG----AAATGCCAAAGGGTTTTCTTTT--GAGCTATTTGAGAGTTATTCAACTTGAGTTATGAGTATACAAATGATTTT-TTTTTTTTTTTTT----AGGAAAGAAAAAGA-GGAAA--AAGGATTTACTTAATTCTTAGTCAAATTCATTTGAT----GATTTTAGGAACTTAT-------------TTAATTTGCTGTTATAATTTATATA---------------------------------------------------CATAACTTCGAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Tribulocarpus_dimorphanthus_Thulin_5343 ATATCCATCATTCTC-TACTAAAGGATGCTCTTGACTCGACATCCTTTGTTCTATTCCACGCGAACCCGCATTT--------------ATTGTTGG-----GGTGTAATGGAA-ATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAGGGAG-AAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGGAACAACTTCGTAAGTATA------TTTTTG------ACAGAGAAATCAAAAGGATCC----AAATCAATCAAGTTTCAAATTCC-----------AAAGGAAATTTTG-----TT-------GGAATTGATTTGATAAAA---------AAC-TTTT-CGATAAAAA-----AAAA-TGATAT----------ATAT-----CGTGCGGGAATACGC----CGCGCATATGATT----CTATTCTTT-------------------GATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACC---CTTTTTA------------------TTTTAATATTTTA-ATATT----T--TAATTAT-----ATTTTAATTGTC----GCAACAAT-------TGGATTTG--------AATCAGAATGCAGAAT-----TCAAATTGATTCTATATTGATTCTAAATGAGAC------AGAGACA-----------TAT-AA-----------AGGGTATCTGAGACTGCTCAAGAAATG----AAATGCCAAAGGATTTTCTTTT--GAGCTATTTGAGAGTTATTCAACTTGAGTTATGAGTATACAAATGATTTTCTTTT-TTTTT-------AGGAAAGAAAAAGA-GGAAA--AAGGATTTACTTAATTCTTAGTCAAATTCATTTGAT----GATTTTAGGAACTTAT-------------TTAATTTGCTGTTATAATTTATATA---------------------------------------------------CATAACTTCGAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Tribulocarpus_dimorphanthus_Thulin_11226 ATATCCATCATTCTC-TACTAAAGGATGCTCTTGACTCGACATCCTTTGTTCTATTCCACGCGAACCCGCATTT--------------ATTGTTGG-----GGTGTAATGGAA-ATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAGGGAG-AAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGGAACAACTTCGTAAGTATA------TTTTTG------ACAGAGAAATCAAAAGGATCC----AAATCAATCAAGTTTCAAATTCC-----------AAAGGAAATTTTG-----TT-------GGAATTGATTTGATAAAA---------AAC-TTTT-CGATAAAAA-----AAAA-TGATAT----------ATAT-----CGTGCGGGAATACGC----CGCGCATATGATT----CTATTCTTT-------------------GATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACC---CTTTTTA------------------TTTTAATATTTTA-ATATT----T--TAATTAT-----ATTTTAATTGTC----GCAACAAT-------TGGATTTG--------AATCAGAATGCAGAAT-----TCAAATTGATTCTATATTGATTCTAAATGAGAC------AGAGACA-----------TAT-AA-----------AGGGTATCTGAGACTGCTCAAGAAATG----AAATGCCAAAGGATTTTCTTTT--GAGCTATTTGAGAGTTATTCAACTTGAGTTATGAGTATACAAATGATTTTCTTTT-TTTTT-------AGGAAAGAAAAAGA-GGAAA--AAGGATTTACTTAATTCTTAGTCAAATTCATTTGAT----GATTTTAGGAACTTAT-------------TTAATTTGCTGTTATAATTTATATA---------------------------------------------------CATAACTTCGAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Cypselea_humifusa ????CCATCATTCTT-TAATAAAGGATGCTCTTGACTCGACATCCTTTGTTCTGGTCCATGTCAACCCGCATTT--------------AGTATTGG-----GATGTAATGGAA-ATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAAGGGG-AAGGG----TCTAGGGTTAGTATTAATCAATAAGTTGGAACAACTTCGTAATTATA------TTTTTG------ACAGATAAATCGAAAGGATCC----AAATGAATCAAGTTTCAAATCCT-----------AAAATCAATTTTG-----TG-------GGAATTGATTTGATAAAATAAAAAAAAAACCTTTT-CGATAAAAA-----AAA--TGATAT----------ATAT-----CGTGTGGCAATAGGC----CGCTCGTATGATT----CTATTTTTT-------------------GATAAAAAGCAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACT---CTTTAT-------------------ATTTT------AA-AT----------------------ATTTTAATTGTC----ACAACAAT-------TGGATTTG--------GATCAGAATGCAAAAT-----TCCAATCGATTCG-----------AAATGAGAC------AGAGACC-----------T-T-AA-----------AGGGTTTC-CAGACTGCTCAATAAATG----AAATGCCAAAGGATTTTTTTTT-----CTATTTGAGAATTATTCAACTTGAGTTATGAGTATACAAATGATTTTCCTTTTTTTTTTT-CTTTAGGAAAGAAAAAG------------GATTTA-------CTTAGTCAAATTCATTTGAT----GATTTTAAGGACTTAT------TTAATTTTTAATTTGTTGTTAGAATTTATATT-------------------CT-----AATTTA---------------TCTACATAAATTCAAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Sesuvium_portulacastrum ATATCCATCATTCTC-TAATAAAGGATGCTCTTGACTCGACATTCTTTGTTCTGTTCCATGTCAACTCGCATTT--------------AGTATTGG-----GATGTAATGGAA-ATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAAGGGG-AAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGGAACAACTTCGTAATTATA------TTTTTG------ACAGATAAATTGAAAGGATCC----AAATCAATCAAGTTTCAAATCCT-----------AAAGTAAATTTTG-----TT-------GGAATTGATTTGATAAAATAAAAAA--AACCTTTT-AGATAAAAAA----AAA--TGATAT----------ATAT-----CGTGTGGCAATAGGC----CGCTCGTATGATT----CTATTTTTT-------------------GATAAAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACT---CTTTAT-------------------ATTTT------AA-AT----------------------ATTTTAATTGTC----GCAACAAT-------TGGATTTG--------GATCAGAATGCAGAAT-----TCAAATCGATTCG-----------AAATGAGAC------AGAGACA-----------TAT-AA-----------AGGGTATTTGAGACTGCTCAATAAATG----AAATGCCAAAGGATTTTTTTTTTTGATCTATTTGAGAATTATTCAACTTGAGTTATGAGTATACAAATGATTTTCCTTGTTTTTTT--CTTTAGGAAAGAAAAAG------------GATTTA-------CTTAGTCAAATTCATTTGAT----GATTTTAAGGACTTAT-------------TTAATTTGTTGTTAGAATTTATATT-------------------CT-----AATTTA---------------TCTACATAAATTCAAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Sesuvium_sesuvioides ATATCCATCATTCTC-TAATAAAGGATGCTCTTGACTCGACATCCTTTGTTCTGTTCCATGTCAACCCGCATTT--------------AGTATTGG-----GATGTAATGGAA-ATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAAGGGG-AAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGGAACAACTTCGTAATTATA------TTTTTGTTTTTGACAGATAAATCGAAAGGATCC----CAATCAATCAAGTTTCAAATCCT-----------AAAGTAAATTTTG-----TT-------GGAATTGATTTGATAAAATAAAAA---AACCTTTT-C-----------------------------------------------------------------------------------------------------------GATAAAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGAAA-ACACT---CTTTAT-------------------ATTTT------AA-AT----------------------ATTTTAATTGTC----GCAACAAT-------TGGATTTG--------GATCAGAATGCAGAAT-----TCAAATCGATTCG-----------AAATGAGAC------AGAGACA-----------TAT-AAAGTA------AAGGGTATTCGAGACTGCTCAATAAATG----AAATGCCAAAGGATTTTCTTTT--GATCTATTTGAGAATTATTCAACTTGAGTTATGAGTATACAAATGATTTTCCTTGGTTTTTTT-CTTTAGGAAAGAAAAAG------------GATTTA-------CTTAGTCAAATTCATTTGAT----GATTTTAAGGACTTAT-------------TTAATTTGTTGTTAGAATTTATATT-------------------CT-----AATTTA---------------CCTACATAAATTCAAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAAGGGGGGTTATTGTTG Sesuvium_verrucosum ATATCCATCATTCTC-TAATAAAGGATGCTCTTGACTCGACATCCTTTGTTCTGTTCCATGTCAACCCGCATTT--------------AGTATTGG-----GATGTAATGGAA-ATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAAGGGG-AAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGGAACAACTTCGTAATTATA------TTTTTG------ACAGATAAATCGAAAGGATCC----AAATCAATCAAGTTTCAAATCCT-----------AAAGTAAATTTTT-----TT-------GGAATTGATTTGATAAAATAAAAAA--AACCTTTT-AGATAAAAAA----AAA--TGATAT----------ATAT-----CGTGTGGCAATAGGC----CGCTCGTATGATT----CTATTTTTTG-----AT---AAAAAGAA-ATAACAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACT---CTTTAT-------------------ATTTT------AA-AT----------------------ATTTTAATTGTC--------------------------------------------GC--AAT-----TCAAATCGATTCG-----------AAATGAGAC------AGAGACA-----------TAT-AA-----------AGGGTATTCGAGACTGCTCAATAAATG----AAATGCCAAAGGATTTTTTTTT--GATCTATTTGAGAATTATTCAACTTGAGTTATGAGTATACAAATGATTTTCCTTGTTTTTTTTTCTTTAGGAAAGAAAAAG------------GATTTA-------CTTAGTCAAATTCATTTGAT----GATTTTAAGGACTTAT-------------TTAATTTGTTGTTAGAATTTATATT-------------------CT-----AATTTA---------------TCTACATAAATTCAAATCATT-----TTTCGCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Trianthema_megasperma ???????TCATTCTC-TAAAAAAGGATGCTCTTGACTCGACATCTTTTGTTCTGTTCCACGCCAACCCCCATTT--------------AGTATTGG-----GGTATAATGGAATATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCAGTTCTCAAAGGGG-AAGGAAGGATCTAGGGTTAGTGTTAATCAATAAGTTAGAACAACTTCGTAATTATA------TTTTTG------ACAGAGAAATCGAAAGGATCC----AAATCAATCAAATTTCAAATCCT-----------AACGTAAATTTTG-----TC-------GGAATGGATTTGATAAAA---------AACCTTTTTCGATAAAAAA----AAAA-TGATAT----------ATAT-----CGTGTGGCAATAGGC----GACTCGTATGATT----CTATTTTTTT-----ATTTCTCTTTTTTGATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGA----TAAAGTACTCCGGAACAAGGAA-ACACT---CTTTAT-------------------ACTTT------AA-AT----------------------ATTTTAATTGTC----GTAACAAT-------AGGATTTG--------CATCAAAATGCAGAAT-----TCAAATCGATTCT-----------AAATGAGAC------AGAGATA-----------TAT-AA-----------AGGGTATTTGAGACTGCTCAATAAATG----AAATGTCAAAGTATTTTCTTTT--GAGCTATTTGAGAATTATTCCACTTGAGTTATGAGGATACAAATGATTTTCTTTG-TTTTTT--CTTTCGAAAAGAAACAGAA-GAAA--AAGGATTTA-------CTTAGTCAAATTCATTTGAT----GATTTTAGGGACTTAT-------------TCAATTTGTTGTTAGAATTTATATT--TG----------------------AATTTA---------------TCTACATAAATTCAAATCATT-----TTCCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCA-GGGGGGTT??????? Trianthema_patellitecta ???????TCATTCTCATAAAAAAGGATGCTCTTGACTCGACATCCTTTGTTCTGTTCCACGCCAACCCCAATTT--------------AGTATTGG-----GGTATAATGTAATATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTTAAAGGGG-AAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTAGAACAACTTCGTAATTATA------TTTTTG------ACAGAGAAATCGAAAGGATCC----AAATCAATCAAATTTCAAATCCT-----------AACGTAAATTTTG-----TT-------GGAATGGATTTGATAAAA---------AACCTTTT-CGATAAAAAAAATTATA--TTATAT----------ATAT-----CGTGTGGAAATAGGC----CGCTCGTATGATT----CTATTTTTTG-----ATTTCTCTTTTTTGATAGAAAAAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGA----TAAAGTACTCCGGAACAAGGAA-ACACT---CTTTATACTTTAAATA-----------TTT------AA-AT----------------------ATTTTAATTGTC----GTAACAATAGGATATAGGATTTGGATCAAAATATCAAAATGCAGAAT-----TCAAATCGATTCT-----------AAATGAGAC------AGAGATA-----------TAT-A-----------AAGGGTATTTGAGACTGCTCAATAAATC----AAATGCCAAAGGATTTTCTTTT--GAGCTATTTGAGACTTATTCCACTTGAGTTATGAGGATACAAATGATTTTCTTTG-TTTTTT--CTTTCGAAAAGAAACAGAA-GAAA--AAGGATTTA-------CTTAGTCAAATTCATTTGAT----GATTTTAGGGACTTAT-------------TAAATTTGTTGTTAGAATTTATATT--TG----------------------AATTTATGTAGATAAATTCAATGTAGATAAATTCAAATCATT-----TTTCTCGAGCCGTACGAGGGGAAAACTTCCTATACGTTTCCAGGGGGGGTG??????? Trianthema_pilosa ????????????CTC-TAAAAAAGGATGCTCTTGACTCGACATCCTGTGTTCTGTTCCACGCCAACCCCCATTTATTT----------AGTATTGG-----GGTATAATGGAATATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAAGGGG-AAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTAGAACAACTTCGTAATTATA------TTTTTG------ACAGAGAAATCGAAAGGATCC----AAATCAATCAAATTTCAAATCCT-----------AACGTAAATTTTG-----TT-------GGAACGGATTTGATAAAA---------AACCTTTT-CGATAAAAAAAA--AAA--TGATAT----------ATAT-----CGTGTGGAAATAGGC----CGCTCGTATGATT----CTATTTTTTG-----ATTTCTCTTTTTTGATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTCAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGA----TAAAGTACTCCGGAACAAGGAA-ACACT---CTTTATACTTTAAATATTTTA----ATTCTTT----AA-AT----------------------ATTTTAATTGTC----GTAAC------------GATTTG--------GATCAAAATGCAGAAT-----TCAAATCGATTCT-----------AAATGAGAC------AGAGATA-----------TAT-A-----------AAGGGTATTTGAGACTGCTCAATAAATC----AAATGCCAAAGGATTTTCTTTT--GAGCTATTTGAGAATTATTCCACTTGAGTTATGAGGATACAAATGATTTTCTTTG-TTTTTT--CTTTCGAAAAGAAACAGAA-GAAA--AAGGATTTA-------CTTAGTAAAATTCATTTGAT----GATTTTAGGGACTTAT-------------TAAATTTGTTGTTAGAATTTATAT----G--------------TC------AATTTA---------------TGTAGATAAATTCAAATCATT-----TTTCTCGAGCCGTACGAGGGGAAAACTTCCTATACGTTTCCAGGGGGGGTG??????? Trianthema_portulacastrum ATATCCATCATTCTC-TAATAAAGAATGCTCTTGACTCGACATCCTTTGTTCTGTTCCACGCCAACCCGCATTT--------------CGTATTGG-----GGTGTAATGGAATATAGTACATGATATGATGGAGCTCGAGTAGAAAGT-----ATTGATTCATTTATCAAAGGGG-AAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGGAACAACTTCGTAATTATA------TTTTTG------ACAGAGAAATCGAAAGGATCC----AAATCAATCAAGTTTCAAATCCT-----------AAAGTAAATTTTG-----TT-------GGAATGGATTTGATAAAATAAAAAAA-AACCTTTT-CGATAAAAAA-----AAA-TGATAT----------ATAT-----CGTGTGGCAATAGGC----CGCTCGTATGATTGATTCGATTTTTAG-----ATTTCTATTTTTTGATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGA----TAAAGGACTCCGGAACAAGGAA-ACACT---CTTTAT-------------------ATTTT------AA-AT----------------------ATTTTAATTGTC----ATAACAAT-------TGGATTTG--------GATCAGAATGCAGAAT-----TCAAATCGATTCT-----------AAATGAGAC------AGAGACA-----------TATTAAAGTA------AAGGGTATTTGAGACTGCTCAAGAAATG----AAATGCCAAAGGATTTTCTTTT--GAGCTATTTGAGAATTATTCCACTTGAGTTATGAGGATACAAATGATTTTCTTTG-TTTTTTT-CTTTAGAAAAGAAAAAGAA-GAAA--AAGGATTTA-------CTTAGTCAAATTCATTTGAT----GATTTTAGGGACTTAT------TTAAT--TTAATTTGTTGTTAGAATTTCGATT-------------------CT-----AATTTA---------------TCTACATAAATTCAAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Trianthema_rhynchocalyptra ATATCCATCATTCTC-TAAAAAAGGATGCTCTTGACTCGACATCCTTTGTTCTGTTCCACGCCAACTCCAATTT--------------AGTATTGG-----GGTATAATGGAATATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTTAAAGGGG-AAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTATAACAACTTCGTAATTATA------TTTTTG------ACAGAGAAATCGAAAGGAGCC----AAATCAATCAAATTTCAAATCCT-----------AACGTAAATTTTG-----TT--GGATTGGAATGGATTTGATATGATAAAA----AACCTTTT-CGATAAAAAA----AAAA-TGATAT----------ATAT-----CGTGTGGAAATAGGC----CGCTCGGATGATT----CTATTTTTTG-----ATTTCTCTTTTTTGATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGA----TAAAGTACTCCGGAACAAGGAA-ACACT---CTTTAT-------------------ACTTT------AA-AT----------------------ATTTTAATTGTC----GTAACAAT-------AGGATTTG--------GATCAAAATGCAGAAT-----TCAAATCGATTCT-----------AAATGAGAC------AGAGATA-----------TAT-AA-----------AGGGTATTTGAGACTGCTCAATAAATC----AAATGCCAAAGGATTTTCTTTT--GAGCTATTTGAGACTTATTCCACTTGAGTTATGAGGATACAAATGATTTTCTTTG-TTTTTT--CTTTCGAAAAGAAACAGAA-GAAA--AAGGATTTA-------CTTAGTCAAATTCATTTGAT----GATTTTAGGAACTTAT-------------TAAATTTGTTGTTAGAATTGAAATT--TG----------------------AATTTA---------------TGCAGATAAATTCAAATCATT-----TTTCTCGAGCCGTACGAGGGGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Trianthema_clavata ATATCCATCATTCTC-TAATAAAGGATGCTCTTGACTCGACATCCTTTGTTCTGTTCCACGTCAACCTGCATTT--------------AGTATTGG-----GGTGTAATGGAA-ATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAAGGGGGAAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGAAACAACTTCGTAATTCTA------TTTTTG------ACAGAGAAATCGAAAGGATCC----AAATCAAT--------------------------ATAGTCAATTTTG-----TT-------GGAATTGATTTGA------AAAAAA--AACCTTTT-CGATAAAAAA-----AA--TGATAT----------ATAT-----CGTACGGCAATAGGC----CGCTCGTATGATT----CAAT-----G-----ATT-CTTTTTTTTGATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAAGGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACT---CTTTAT-------------------ATTTT------AA-AT----------------------ATTTTAATTGTC----ACAACAAT-------TGAATTTG--------GATCAGAATGCAGAAT-----TCAAATCGATTCT-----------AAATGAGAC------AGAGACA-----------TAT-AA-----------AGGGTATTTGAGACTGCTCAATAAATGAAATAAATGCCAAAGGGTTTTCTTTT--GAGCTATTTGAGAATTATTCAACTTGAGTTATGAGTATACAAATGATTTTCTGTA-TTTTTT--CGTTAGGAAAGAAAACGAA-GAAA--AAGGATTTA-------CTTAGTCAAATTCATTT------------------------------------TTAATTTGTTGTTAAAATTTCTATT--TG----------------------AATTTA---------------TCTACATAAATCCAAATCATT-----TTTCTCGAGCCGTACGAGGGGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Trianthema_parvifolia_HH_25483 ATATCCATCATTCTC-TAATAAAGGATGCTCTTGACTCGACATCCTTTGTTCTGTTCCACGTCAACCTGCATTT--------------AGTATTGG-----GGTGTAATGGAA-ATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAAGGGGGAAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGGAACAACTTCGTAATTCTA------TTTTTG------ACAGAGAAATCGAAAGGATCC----AAATCAATCAAGTTTCAAATCCT-----------AAAGTCAATTTTG-----TT-------GGAATTGATTTGA------AAAAAA--AACCTTTT-CGATAAAAAA----AAA--TGATAT----------ATAT-----CGTACGGCAATAGGC----CGCTCGTATGATT----CAAT-----G-----ATT-CTTTTTTTTGATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAAGGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACT---CTTTAT-------------------ATTTA------AA-AT----------------------ATTTTAATTGTC----GCAACAAT-------TGGATTTG--------GATCAGAATGCAGAAT-----TCAAATCGATTCT-----------AAATGAGAC------AGAGACA-----------TAT-AA-----------AGGGTATTTGAGACTGCTCAATAAATGAAATAAATGCCAAAGGGTTTTCTTTT--GAGCTATTTGAGAATTATTTAACTTGAGTTATGAGTATACAAATGATTTTCTGTA-TTTTTT--CGTTAGGAAAGAAAAAG------------GATTTA-------CTTAATCAAATTCATTT------------------------------------TTAATTTGTTGTTAAAATTTCTATT--TG----------------------AATTTA---------------TCTACATAAATCCAAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Trianthema_parvifolia_HH_34443 ATATCCATCATTCTC-TAATAAAGGATGCTCTTGACTCGACATCCTTTGTTCTGTTCCACGTCAACCTGCATTT--------------AGTATTGG-----GGTGTAATGGAA-ATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAAGGGGGAAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGGAACAACTTCGTAATTCTA------TTTTTG------ACAGAGAAATCGAAAGGATCC----AAATCAATCAAGTTTCAAATCCT-----------AAAGTCAATTTTG-----TT-------GGAATTGATTTGA------AAAAAA--AACCTTTT-CGATAAAAAA----AAA--TGATAT----------ATAT-----CGTACGGAAATAGGC----CGCTCGTATGATT----CAAT-----G-----ATT-CTTTTTTTTGATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAAGGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACT---CTTTAT-------------------ATTTA------AA-AT----------------------ATTTTAATTGTC----GCAACAAT-------TGGATTTG--------GATCAGAATGCAGAAT-----TCAAATCGATTCT-----------AAATGAGAC------AGAGACA-----------TAT-AA-----------AGGGTATTTGAGACTGCTCAATAAATGAAATAAATGCCAAAGGGTTTTCTTTT--GAGCTATTTGAGAATTATTTAACTTGAGTTATGAGTATACAAATGATTTTCTGTA-TTTTTT--CGTTAGGAAAGAAAAAG------------GATTTA-------CTTAATCAAATTCATTT------------------------------------TTAATTTGTTGTTAAAATTTCTATT--TG----------------------AATTTA---------------TCTACATAAATCCAAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTATTG Trianthema_salsoloides ATATCCATCATTCTC-TAATAAAGGATGCTCTTGACTCGACATCCTTTGTTCTGTTCCACGTCAACCTGCATTT--------------AGTATTGG-----GGTGTAATGGAA-ATAGTACATGAT-----GGAGCTCGCGTAGAAAGT-----ATTGATTCATTTCTCAAAGGGGGAAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGAAACAACTTCGTAATTCTA------TTTTTG------ACAGAGAAATCGAAAGGATCC----AAATCAATCAAGTTTCAAATTCT-----------AAAGTCAATAGTC-AATTTT---G-TTGGAATTGATTTGA------AAAAAA-AAACCTTTT-CGATAAAAAA-----AA--TGATAT----------ATAT-----CGTACGGCAATAGGC----CGCTCGTATGATT----CAAT-----G-----ATT-CTTTTTTTTGATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAAGGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACT---CTTTAT-------------------ATTTT------AA-AT----------------------ATTTTAATTGTC----ACAACAAT-------TGGATTTG--------GATCAGAATGCAGAAT-----TCAAATCGATTCT-----------AAATGAGAC------AGAGACA-----------TAT-AA-----------AGGGTATTTGAGACTGCTCAATAAATGAAATAAATGCCAAAGGGTTTTCTTTT--GAGCTATTTGAGAATTATTCAACTTGAGTTATGAGTATACAAATGATTTTCTGTA-TTTTTT--CGTTAGGAAAGAAAACGAA-GAAA--AAGGATTTA-------CTTAGTCAAATTCATTT------------------------------------TTAATTTGTTGTTCAAATTTCTATT--TG----------------------AATTTA---------------TCTACATAAATCCAAATTATT-----TTTCTCGAGCCGTACGAGGGGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Trianthema_sedifolia ATATCCATCATTCTC-TAATAAAGGATGCTCTTGACTCGACATCCTTTGTTCTGTTCCACGTCAACCTGCATTT--------------AGTATTGG-----GGTGTAATGGAA-ATAGTACATGAT-----GGAGCTCGAGTAGAAATT-----ATTGATTCATTTTTCAAAGGGGGAAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGAAACAACTTCGTAATTCTA------TTTTTG------ACAGAGAAATCGAAAGGATCC----AAATCAAT--------------------------ATAGTCAATTTTG-----TT-------GGAATTGATTTGA------AAAAAA--AACCTTTT-CGATAAAAAA-----AA--TGATAT----------ATAT-----CGTACGGCAATAGGC----CGCTCGTATGATT----CAAT-----G-----ATT-CTTTTTTTTGATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAAGGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACT---CTTTAT-------------------ATTTTT-----AATATTTTA------------------ATTTTAATTGTC----ACAACAAT-------TGAATTTG--------GATCAGAATGCAGAAT-----TCAAATCGATTCT-----------AAATGAGAC------AGAGACA-----------TAT-AA-----------AGGGTATTTGAGACTGCTCAATAAATGAAATAAATGCCAAAGGGTTTTCTTTT--GAGCTATTTGAGAATTATTCAACTTGAGTTATGAGTATACAAATGATTTTCTGTA-TTTTTT--CGTTAGGAAAGAAAACGAA-GAAA--AAGGATTTA-------CTTAGTCAAATTCATTT------------------------------------TTAATTTGTTGTTAAAATTTCTATT--TG-AATTTATCTAATTTCTATTTGAATTTA---------------TCTACATAAATCCAAATCATT-----TTTCTCGAGCCGTACGAGGGGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Trianthema_sheilae ATATCCATCATTCTC-TAATAAAGGATGCTCTTGACTCGACATCCTTTGTTCTGTTCCACGTCAACCTGCATTT--------------AGTATTGG-----GGTGTAATGGAA-ATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAAGGGGGAAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGGAACAACTTCGTAATTCTA------TTTTTG------ACAGAGAAATCGAAAGGATCC----AAATCAATCAAGTTTCAAATCCTTTTCAAATCCTAAAGTCAATTTTGCAATTTT----ATTGGAATTGATTTGA------AAAAAA--AACCTTTT-CGATAAAAAA--AAAAAA-TGATAT----------ATAT-----CGTACGGCAATAGGC----CGCTCGTATGATT----CAAT-----G-----ATT-CTTTTTTTTGATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTCAAAATCAACGAAGTAATGTCTAAACCCAAGGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACT---CTTTAT-------------------ATTTT------AA-AT----------------------ATTTTAATTGTC----GCAACAAT-------TGGATTTG--------GATCA-------GAAT-----TCAAATCGATTCT-----------AAATGAGAC------AGAGACA-----------TAT-AA-----------AGGGTATTTGAGACTGCTCAATAAATGAAATAAATGCCAAAGGGTTTTCTTTT--GAGCTATTTGAGAATTATTTAACTTGAGTTATGAGTATACAAATGATTTTCTGTA-TTTTTT--CGTTAGGAAAGAAAAAGAA-GAAA--AAGGATTTA-------CTTAGTCAAATTCATTT------------------------------------TTAATTTGTTGTTAAAATTTCTATT--TG----------------------AATTTA---------------TCTACATAAATCCAAATCATT-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Trianthema_ufoensis ATATCCATCATTCTC-TAATAAAGGATGCTCTTGACTCGACATCCTTTGTTCTGTTCCACGTCAACCTGCATTT--------------AGTATTGG-----GGTGTAATGGAA-ATAGTACATGAT-----GGAGCTCGAGTAGAAAGT-----ATTGATTCATTTCTCAAAGGGGGAAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGAAACAACTTCGTAATTCTA------TTTTTG------ACAGAGAAATCGAAAGGATCC----AAATCAAT--------------------------ATAGTCAATTTTG-----TT-------GGAATTGATTTGAA-----AAAAAA--AACCTTTT-CGATAAAAAA-----AA--TGATAT----------ATAT-----CGTACGGCAATAGGC----CGCTCGTATGATT----CAAT-----G-----ATT-CTTTTTTTTGATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAAGGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACT---CTTTAT-------------------ATTTT------AA-AT----------------------ATTTTAATTGTC----ACAACAAT-------TGAATTTG--------GATCAGAATGCAGAAT-----TCAAATCGATTCT-----------AAATGAGAC------AGAGACA-----------TAT-AA-----------AGGGTATTTGAGACTGCTCAATAAATGAAATAAATGCCAAAGGGTTTTCTTTT--GAGCTATTTGAGAATTATTCAACTTGAGTTATGAGTATACAAATGATTTTCTGTA-TTTTTT--CGTTAGGAAAGAAAACGAA-GAAA--AAGGATTTA-------CTTAGTCAAATTCATTT------------------------------------TTAATTTGTTGTTAAAATTTCTATT--TG----------------------AATTTA---------------TCTACATAAATCCAAATCATT-----TTTCTCGAGCCGTACGAGGGGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Zaleya_galericulata ATATCCATCATTCTC-TAATAAAGGATGCTCTTGACTCGACATCCATTGCTCTATTCCACGCCAACCCGCATTT--------------AGTATTGG-----GGTGTAATGAAA-ATAGTATATGAT-----GGAGCTCGAGTAGAAAGT-----ATTTATTCATTTCTCAAAGGGG-AAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGGAACAACTTCGTAATTCTA------TTTTTG------ACAGAGAAATCGAAAGGAGCC----AAATCAATCAAGTTTCAAATCCT-----------AAAATCAATTTTG-----TT-------GGAATTGATTTGATAAAATAAAA----AACCTTTT-CGATAAAAAA-----AA---GATATATTAT-----ATATTGTATTGTGCGGCAATAGGC----CGCTCGTATGATT-----------------------CTATTTTTTGATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACT---CTTTAT-------------------ATTTT------AA-AT----------------------ATTTTAATTGTC----GCAACAAT-------TGGATTTG--------GATCAGAATGCAGAAT-----TCAAATCAATTCT-----------AAATGAGAC------AGAGACA-----------TAT-AA-----------AGGGTATTTGAGACTGCTCAATAAATG----AAATGTCAAAAGATTGTCTTTT--GAGCTATTTGAGAATTATTCAACTTGAGTTATGAGTATACAAATGATTTTCTTTG-TTTTTT--CGTTAGGAAAGAAAAAG------------GATTTA-------TTTAGTCAAATTCATTTGAT----GATTTTAGGGACTTAT-------------TTAATTTGTTGTTAGAATTTATATT-------------------CT-----AATTTA---------------TCTACATAAATTCAAATCATG-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG Zaleya_pentandra ATATCCATCATTCAC-TAATAAAGGATGCTCTTGACTCGACATCCATTGCTCTATTCCACGCCAACCCGCATTT--------------AGTATTGG-----GGTGTAATGAAA-ATAGTATATGAT-----GGAGCTCGAGTAGAAAGT-----ATTTATTCATTTCTCAAAGGGG-AAGGG----TCTAGGGTTAGTGTTAATCAATAAGTTGGAACAACTTCGTAATTCTA------TTTTTG------ACAGAGAAATCGAAAGGAGCC----AAATCAATCAAGTTTCAAATCCT-----------AAAATCAATTTTG-----TT-------GGAATTGATTTGATAAAATAAAA----AACCTTTT-CGATAAAAAA----AAA---GATATATTAT-----ATATTGTATTGTGCGGCAATAGGC----CGCTCGTATGATT-----------------------CTATTTTTTGATAGAAAGAAATAACAAAAAGGGTATGTTGCTGCCATTTTTGAAAGGATTAAAAATCAACGAAGTAATGTCTAAACCCAATGATTCAAAACAAAGA----TAAAGGATTCCGGAACAAGGAA-ACACT---CTTTAT-------------------ATTTT------AA-AT----------------------ATTTTAATTGTC----GCAACAAT-------TGGATTTG--------GATCAGAATGCAGAAT-----TCAAATCAATTCT-----------AAATGAGAC------AGAGACA-----------TAT-AA-----------AGGGTATTTGAGACTGCTCAATAAATG----AAATGTCAAAAGATTTTCTTTT--GAGCTATTTGAGAATTATTCAACTTGAGTTATGAGTATACAAATGATTTTCTTTG-TTTTTT--CGTTAGGAAAGAAAAAG------------GATTTA-------TTTAGTCAAATTCATTTGAT----GATTTTAGGGACTTAT-------------TTAATTTGTTGTTAGAATTTATATT-------------------CT-----AATTTA---------------TCTACATAAATTCAAATCATG-----TTTCTCGAGCCGTACGAGGAGAAAACTTCCTATACGTTTCCAGGGGGGGTTATTGTTG ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 1188; END; BEGIN TREES; Title 'rps16, three most parsimonious trees'; LINK Taxa = Taxa; TRANSLATE 1 Gisekia_africana, 2 Gisekia_pharnacioides, 3 Brownanthus_pubescens, 4 Carpanthea_pomeridiana, 5 Drosanthemum_speciosum, 6 Mesembryanthemum_aitonis, 7 Aizoon_asbestinum, 8 Aizoon_canariense, 9 Galenia_africana, 10 Galenia_sp_HH_34679, 11 Plinthus_karooicus, 12 Tetragonia_fruticosa, 13 Tribulocarpus_retusus_Thulin_10511, 14 Tribulocarpus_dimorphanthus_South_Africa, 15 Tribulocarpus_dimorphanthus_Thulin_5343, 16 Tribulocarpus_dimorphanthus_Thulin_11226, 17 Cypselea_humifusa, 18 Sesuvium_portulacastrum, 19 Sesuvium_sesuvioides, 20 Sesuvium_verrucosum, 21 Trianthema_megasperma, 22 Trianthema_patellitecta, 23 Trianthema_pilosa, 24 Trianthema_portulacastrum, 25 Trianthema_rhynchocalyptra, 26 Trianthema_clavata, 27 Trianthema_parvifolia_HH_25483, 28 Trianthema_parvifolia_HH_34443, 29 Trianthema_salsoloides, 30 Trianthema_sedifolia, 31 Trianthema_sheilae, 32 Trianthema_ufoensis, 33 Zaleya_galericulata, 34 Zaleya_pentandra; TREE PAUP_1 = ((1,2),((((3,6),(4,5)),(12,((7,11),(8,(9,10))))),((14,(13,(15,16))),(((19,(17,(18,20))),(24,(21,(23,(22,25))))),((33,34),((31,(27,28)),(29,(32,(26,30)))))))))[% ] [% ] [% setBetweenBits = selected ]; TREE PAUP_2 = ((1,2),((((3,6),(4,5)),(12,((7,11),(8,(9,10))))),((14,(13,(15,16))),(((19,(17,(18,20))),(24,(21,(23,(22,25))))),((33,34),((31,(27,28)),(29,(26,(30,32)))))))))[% ] [% ] [% setBetweenBits = selected ]; TREE PAUP_3 = ((1,2),((((3,6),(4,5)),(12,((7,11),(8,(9,10))))),((14,(13,(15,16))),(((19,(17,(18,20))),(24,(21,(23,(22,25))))),((33,34),((31,(27,28)),(29,(30,(26,32)))))))))[% ] [% ] [% setBetweenBits = selected ]; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 1188; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1188; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1315303679445; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 2944177759245744008; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 1567903128403084008; mqVersion 274; checksumv 0 2 1562953798 null getNumChars 1188 numChars 1188 getNumTaxa 34 numTaxa 34 short true bits 15 states 15 sumSquaresStatesOnly 726300.0 sumSquares 726300.0 NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 252; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 464; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #2944177759245744008 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 1464.1315303601350.8501634502991732459; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 448 397; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.reroot; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle on; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;