#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=24; TAXLABELS Urosphena_squameiceps_1_AB159178 Urosphena_squameiceps_2_AB159177 Urosphena_squameiceps_3_AB159179 Cettia_cetti_1_AJ004313 Cettia_cetti_2_AJ004312 Cettia_cetti_3_AJ004311 Cettia_cetti_4_AJ004798 Cettia_fortipes_L77122 Cettia_diphone_1_AB159199 Cettia_diphone_2_AB159198 Cettia_diphone_3_AB159197 Cettia_diphone_4_AB159196 Cettia_diphone_5_AB159195 Cettia_diphone_6_AB159194 Cettia_diphone_7_D38315 Cettia_haddeni_AMNH836189_DQ066451 Cettia_parens_AMNH228061_DQ288966 Cettia_parens_AMNH228065_DQ288967 Cettia_ruficapilla_AMNH224390_DQ288968 Cettia_ruficapilla_AMNH251968_DQ288969 Cettia_annae_AMNH332080_DQ288970 Cettia_annae_AMNH332081_DQ288971 Aegithalos_caudatus_AB159169 Psaltriparus_minimus_AF074597 ; END; BEGIN CHARACTERS; TITLE Cettia_cytb; DIMENSIONS NCHAR=1148; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Urosphena_squameiceps_1_AB159178 atggcccctaatcttcgtaaaaaccacccactcctaaaaatcatcaacgactccctaattgatctcccaacaccatcaaacatctcctcttgatgaaactttgggtcactcttaggaatctgcttaattacacaaatcgtaacaggtctcttactagccatacactatacagcggacacttccctagcctttgcctccgtcacccatatgtgtcgaaacgtccaatttggctgactaatccgtaacctccacgcgaacggagcctccttcttcttcatctgcatctacttccacattggccgaggactctactacggctcatacctaaacaaagaaacctgaaatatcggagtcatcctcctactagcacttatagcaactgccttcgtaggatacgtcctaccctgaggacaaatatctttctgaggagccacagtaattaccaacctattctcagcaatcccctacatcggtcaaacactggtagaatgactctgagggggattctcagtagacaacccaaccttaacccgatttttcgccattcacttcctcctgccattcatcatcgtaggactcacactagtccatctcaccttcctacacgaaacaggctcaaacaaccccctaggaatcccatctgactgcgataaaatcccattccacccctactactccacaaaagacatcctaggatttgcattcatactcatctcactagccgctctagccctattctcccccaacctgctaggagacccagaaaacttcacaccagccaaccccctagccacaccccctcatatcaaacctgaatgatacttcctatttgcctatgctatcctccgatccatcccaaacaaactagggggagtactagcccttgctgcctccgttctagtcctattcctaatcccactactccacacatccaaattacgttcaataactttccgccccctatcacaaatcctattctgaaccctagttgcaaacctccttattctaacctgagtaggcagccaaccagtagaacacccattcatcatcatcggtcaactagcctcattcacctacttcacaatcattctaatcctcttcccccttgtatccatcctagaaaacaagatacttaaactttaa----- Urosphena_squameiceps_2_AB159177 atggcccctaatcttcgtaaaaaccacccactcctaaaaatcatcaacgactccctaattgatctcccaacaccatcaaacatctcctcttgatgaaactttgggtcactcttaggaatctgcttaattacacaaatcgtaacaggtctcttactagccatacactatacagcggacacttccctagcctttgcctccgtcacccatatgtgccgaaacgtccaatttggctgactaatccgtaacctccacgcgaacggagcctccttcttcttcatctgcatctacttccacattggccgaggactctactacggctcatacctaaacaaagaaacctgaaatatcggagtcatcctcctactagcacttatagcaactgccttcgtaggatacgtcctaccctgaggacaaatatctttctgaggagccacagtaattaccaacctattctcagcaatcccctacatcggtcaaacactggtagaatgactctgagggggattctcagtagacaacccaaccttaacccgatttttcgccattcacttcctcctgccattcatcatcgtaggactcacactagtccatctcaccttcctacacgaaacaggctcaaacaaccccctaggaatcccatctgactgcgataaaatcccattccacccctactactccacaaaagacatcctaggatttgcattcatactcatctcactagccgctctagccctattctcccctaacctgctaggagacccagaaaacttcacaccagccaaccccctggccacaccccctcatatcaaacctgaatgatacttcctatttgcctatgctatcctccgatccatcccaaacaaactagggggagtactagcccttgctgcctccgttctagtcctattcctaatcccactactccacacatccaaattacgttcaataactttccgccccctatcacaaatcctattctgaaccctagttgcaaacctccttattctaacctgagtaggcagccaaccagtagaacacccattcatcatcatcggtcaactagcctcattcacctacttcacaatcattctaatcctcttcccccttgtatccatcctagaaaacaagatacttaaactttaa----- Urosphena_squameiceps_3_AB159179 atggcccctaatcttcgtaaaaaccacccactcctaaaaatcatcaacgactccctaattgatctcccaacaccatcaaacatctcctcttgatgaaactttgggtcactcttaggaatctgcttaattacacaaatcgtaacaggtctcttactagccatacactatacagcggacacttccctagcctttgcctccgtcacccatatgtgccgaaacgtccaatttggctgactaatccgtaacctccacgcgaacggagcctccttcttcttcatctgcatctacttccacattggccgaggactctactacggctcatacctaaacaaagaaacctgaaatatcggagtcatcctactactagcacttatagcaactgccttcgtaggatacgtcctaccctgaggacaaatatccttctgaggagccacagtaattaccaacctattctcagcaatcccctacatcggtcaaacactggtagaatgactctgagggggattctcagtagacaacccaaccttaacccgatttttcgccattcacttcctcctgccattcatcatcgtaggactcacactagtccatctcaccttcctacacgaaacaggctcaaacaaccccctaggaatcccatctgactgcgataaaatcccattccacccctactactccacaaaagacatcctaggatttgcattcatactcatctcactagccgctctagccctattctcccctaacctgctaggagacccagaaaacttcacaccagccaaccccctggccacaccccctcatatcaaacctgaatgatacttcctatttgcctatgctatcctccgatccatcccaaacaaactagggggagtattagcccttgctgcctccgttctagtcctattcctaatcccactactccacacatccaaattacgttcaataactttccgccccctatcacaaatcctattctgaaccctagttgcaaacctccttattctaacctgagtaggcagccaaccagtagaacacccattcatcatcatcggtcaactagcctcattcacctacttcacaatcattctaatcctcttcccccttgtatccatcctagaaaacaagatacttaaactttaa----- Cettia_cetti_1_AJ004313 ---------------------------------------------------------------------------------------------------ttcggatcgctattaggcatctgcctaatcacacaaattgtcacaggacttctactagccatgcactatacagcggatacttctctagcctttgcctccgtcacccacatgtgccgaaatgtccaatttggttgactaatccgaaatctacatgcaaacggagcttccttctttttcatctgcatctacttccacatcggccgaggcctatattacggctcttacttaaacaaagaaacctgaaatatcggagtaattctcctattagcactaatagcaactgcctttgtaggttatgtactcccctgaggacaaatatcattctgaggagctacagtaatcaccaacctattctcagcaatcccatacattggtcaaaccctagtagagtgactatgaggcggattctcagttgataacccaaccctaacccgatttttcgccattcatttcctacttccattcgtcatcgtaggactcacactagtccatctcacattcctacacgaaacgggttctaacaaccccataggaattccatcagactgcgacaaaatcccattccatccatattactctattaaagacatcttaggatttgcattcatacttgtctcctcgttgcccctagccctattctcccccaacctcttaggagacccagaaaacttcacaccagccaatcccctagccactccaccacacatcaaacccgaatgatacttcctattcgcctacgccatctttcgatctatcccaaacaaactaggaggagttctagccctagccgcttccgtcctagtcctattcctcat?ccactactacacacatcaaaagtacgctcaataactttccgtcctctttcacaaatcctattctgaaccctagtagcgaacctcctagtactaacttgagtaggcagccaaccagtagaacacccattcatcattattggccaactagcctcattcacctacttcacaatcattctagtcctcttcccccttgtctccatcctagaaaacaaaatactaaaactc-------- Cettia_cetti_2_AJ004312 ---------------------------------------------------------------------------------------------------ttcggatcgctattaggcatctgcttaattacacaaattgtcacaggacttctactagccatgcactatacagcggatacttctctagcctttgcctccgtcacccatatgtgccgaaatgtccaatttggctgactaatccgaaatctacatgcaaacggagcttccttctttttcatctgcatctacttccacatcggccgaggcctatattacggctcttacttaaacaaagaaacctgaaatatcggagtaattctcctattagcactaatagcaactgccttcgtaggttatgtactcccctgaggacaaatatcattctgaggagctacagtaatcaccaacctattctcagcaatcccatacattggtcaaaccctagtagagtgagtatgaggcggattctctgttgataacccaaccctaactcgatttttcgccattcatttcctactcccattcgtcatcgtaggactcacactagtccatctcacattcctacacgaaacgggttctaacaaccccataggaattccatcagactgcgacaaaatcccattccatccatattactctcttaaagacatcttaggatttgcattcatactcatctcctcgttgcccctagccctattctcccccaacctcttaggagacccagaaaacttcacaccagccaatcccctagccactccaccacatatcaaacccgaatgatacttcctatttgcctacgccatcttacgatctatcccaaacaaactaggaggagttctagccctagctgcttccgtcctagtcctattcctcat?ccactactacacacatcaaaagtacgctcaataactttccgtcctctttcacaaatcctattctgaaccctagtagcgaacctcctagtactaacttgagtaggcagccaaccagtagaacacccattcatcattattggccaactagcctcattcacctacttcacaatcattctagtcctcttcccccttgtctccatcctagaaaacaaaattcttaaactt-------- Cettia_cetti_3_AJ004311 ---------------------------------------------------------------------------------------------------ttcggatcgctattaggcatctgcttaattacacaaattgtcacaggacttctactagccatgcactatacagcggatacttctctagcctttgcctccgtcacccatatgtgccgaaatgtccaatttggctgactaatccgaaatctacatgcaaacggagcttccttctttttcatctgcatctacttccacatcggccgaggcctatattacggctcttacttaaacaaagaaacctgaaatatcggagtaattctcctattagcactaatagcaactgccttcgtaggttatgtactcccctgaggacaaatatcattctgaggagctacagtaatcaccaacctattctcagcaatcccatacattggtcaaaccctagtagagtgagtatgaggcggattctctgttgataacccaaccctaactcgatttttcgccattcatttcctactcccattcgtcatcgtaggactcacactagtccatctcacattcctacacgaaacgggttctaacaaccccataggaattccatcagactgcgacaaaatcccattccatccatattactctcttaaagacatcttaggatttgcattcatactcatctcctcgttgcccctagccctattctcccccaacctcttaggagacccagaaaacttcacaccagccaatcccctagccactccaccacatatcaaacccgaatgatacttcctatttgcctacgccatcttacgatctatcccaaacaaactaggaggagttctagccctagctgcttccgtcctagtcctattcctcat?ccactactacacacatcaaaagtacgctcaataactttccgtcctctttcacaaatcctattctgaaccctagtagcgaacctcctagtactaacttgagtaggcagccaaccagtagaacacccattcatcattattggccaactagcctcattcacctacttcacaatcattctagtcctcttcccccttgtctccatcctagaaaacaaaattcttaaactt-------- Cettia_cetti_4_AJ004798 ------------------------------------------------------------------------------------------------------ggatcgctattaggcatctgcttaattacacaaattgtcacaggacttctactagccatgcactatacagcggatacttctctagcctttgcctccgtcacccacatgtgccgaaatgtccaatttggttgactaatccgaaatctacatgcaaacggagcttccttctttttcatctgcatctacttccacatcggccgaggcctatattacggctcttacttaaacaaagaaacctgaaatatcggagtaattctcctattagcactaatagcaactgcctttgtaggttatgtactcccatgaggacaaatatccttctgaggggctacagtaatcaccaacctattctcagcaatcccatacattggtcaaaccctagtagagtgactatgaggcggattctcagttgataacccaaccctaacccgatttttcgccattcatttcctacttccattcgtcatcgtaggactcacactagtccacctcacattcctacacgaaacgggttctaacaaccccataggaattccatcagactgcgacaaaatcccattccatccatattactctattaaagacatcttaggatttgcattcatacttgtctctctcgttgccctagccctattctcccccaacctgttaggagacccagaaaacttcacaccagccaatcccctagccacaccaccacacatcaaacccgaatgatacttcctattcgcctacgccatccttcgatctatcccaaacaaactaggaggagttctagccctagccgcttccgtcctagtcctattcctcattccactactccacacatcaaaagtacgttcaataactttccgtcctctttcacaaatcctattctgaaccctagtagcgaacctcctagtactaacttgagtaggcagccaaccagtagaacacccattcatcattattggccaactagc?tcattcacctacttcacaatccttctagtcctcttcccc?t?gt?tccatcctagaaaacaaaat?ct?aa?ct?ta?----- Cettia_fortipes_L77122 --------------------------------------------------------------------------------------------------cttcggatcactcttagggatttgtctaatcacacaaattgtcacaggccttctcctggccatacactacacagcagacacctccctagccttcgcttctgtcactcacatatgccgcaacgtccaatttggctgactaatccgcaacctacatgcaaacggagcctccttcttcttcatctgcatctacttccacatcggccgaggactatactacggctcatacctgaacaaagaaacctgaaacatcggagtaatcctcctactagcccttatagcaaccgcctttgtaggatatgtcctgccatgaggacaaatatccttctgaggggctacagtaatcactaatctattctcagcaatcccgtacattggccaaacactggtagaatggctatgaggcggattctcagtagacaacccaaccctaacccgattttttgccatccacttcctcctgccgttcatcatcgcaggacttacactagtccatcttaccttcctacacgaaacaggctcaaacaacccactaggcatcccatcagactgtgacaaaatcccattccacccctattactctacaaaggacatcttagggttcgcattcatactcatctcccttaccgccctcgccctattttcccctaacctgctaggagacccagaaaatttcacaccagccaaccccctagccacacccccacatatcaaacccgaatgatacttcttattcgcctacgctatcctccgatccatcccaaacaaactaggcggagtcctagccctcgctgcctctgtcctagtcctattcctcatcccactactacacacatccaaactacgatcaataaccttccgccctctatcccaaatcctgttctgaaccctagttgccaacctcctcattcta-------------------------------------------------------------------------------------------------------------------------------------------- Cettia_diphone_1_AB159199 atggccctcaaccttcgtaaaaaccacccactactaaaaatcatcaacgactccctaattgatctcccaaccccatcaaacatctccacctgatgaaacttcggatcacttctaggaatctgtctagtcacacaaatcgtcacaggcctcctactagccatgcactacacagcagacacttccctagccttcgcctctgtcacccacatatgccgcaacgtccaatttggatgactaatccgtaacctacacgcaaacggagcttccttcttctttatctgcatttactttcacattggccgaggactatactacggctcatacctaaataaagaaacctgaaatatcggagtaatcctcctactagccctcatagcaactgccttcgtaggctatgtcctaccatgaggacaaatatccttctgaggagccacagtaatcaccaacctattctcagcaatcccatacatcggccaaacattagtagaatgactatgaggcggattctcagtagacaaccccactctaacccgattcttcgctatccacttcctcctaccgttcgttatcgtaggacttacattagtccacctcaccttcctacacgaaacaggctcaaacaacccactaggcatcccatcggactgcgacaaaatcccattccacccatactactccacaaaagacatcctaggattcgcattcatgctcatctccctagtcgctcttgctctattctcccccaacctcctgggagacccagaaaacttcacaccagccaaccccctagccacacccccccacatcaaacctgaatgatacttcctatttgcctacgccattcttcgatccatcccaaacaaactaggcggagtactagccctcgccgcctccgtcctagtcctattcctcatcccactactacacacatccaaactacgctcaataaccttccgccccctatcacaaatcctattctgaaccctagtagccaacctcctcgtcctaacctgagtaggcagccaaccagttgaacacccattcatcatcattggccaacttgcctcattcacctacttcacaatcattctagtcctattcccccttgcatccatcctagaaaacaagatacttaaactctaa----- Cettia_diphone_2_AB159198 atggccctcaaccttcgtaaaaaccacccactactaaaaatcatcaacgactccctaattgatctcccaaccccatcaaacatctccacctgatgaaacttcggatcacttctaggaatctgtctagtcacacaaatcgtcacaggcctcctactagccatgcactacacagcagacacttccctagccttcgcctctgtcacccacatatgccgcaacgtccaatttggatgactaatccgtaacctacacgcaaacggagcttccttcttctttatctgcatttactttcacattggccgaggactatactacggctcatacctaaataaagaaacctgaaatatcggagtaatcctcctactagccctcatagcaactgccttcgtaggctatgtcctaccatgaggacaaatatccttctgaggagccacagtaatcaccaacctattctcagcaatcccatacatcggccaaacattagtagaatgactatgaggcggattctcagtagacaaccccactctaacccgattcttcgctatccacttcctcctaccgttcgttatcgtaggacttacattagtccacctcaccttcctacacgaaacaggctcaaacaacccactaggcatcccatcggactgcgacaaaatcccattccacccatactactccacaaaagacatcctaggattcgcattcatgctcatctccctagtcgctcttgctctattctcccccaacctcctgggagacccagaaaacttcacaccagccaaccccctagccacacccccccacatcaaacctgaatgatacttcctatttgcctacgccattcttcgatccatcccaaacaaactaggcggagtactagccctcgccgcctccgtcctagtcctattcctcatcccactactacacacatccaaactacgctcaataaccttccgccccctatcacaaatcctattctgaaccctagtagccaacctcctcgtcctaacctgagtaggcagccaaccagttgaacacccattcatcatcattggccaacttgcctcattcacctacttcacaatcattctagtcctattcccccttgcatccatcctagaaaacaagatacttaaactctaa----- Cettia_diphone_3_AB159197 atggccctcaaccttcgtaaaaaccacccactactaaaaatcatcaacgactccctaattgacctcccaaccccctcaaacatctccacctgatgaaattttggatcactcctaggaatctgtctagtcacacaaatcgtcacaggcctcctactagccatgcactacacagcagacacctccctagccttcgcctccgtcacccacatatgccgcaatgtccaatttgggtgactaatccgtaacctacacgcaaacggagcttccttcttctttatctgcatttacttccacattggccgaggactatactacggctcatacctaaataaagaaacctgaaacatcggagtaatcctcttactagccctcatagcaactgccttcgtaggctatgtcctaccatgaggacaaatatccttctgaggagccacagtaatcaccaacctattctcagcaatcccatacatcggccaaacattagtagaatgactatgaggcggattctcggtagacaaccccactctaacccgattctttgctatccacttcctcctaccattcgttatcgcaggacttacattagtccacctcaccttcctacacgaaacaggctcaaacaacccactgggcatcccatcggactgcgacaaaatcccattccacccatactactccacaaaagacatcctagggttcgcattcatactcatctccctagccgctcttgccctattctcccccaacctcctgggagacccagaaaacttcacaccagccaaccccctagccacgcccccccacatcaaacccgaatgatacttcctatttgcctacgccattcttcgatccatcccaaacaaactaggcggagtactagccctcgccgcctccgtcctagtcctattcctcatcccactactacacacatccaaactacgctcaataaccttccgccccctatcacaaatcctattctgaaccctagtcgccaacctcctcatcctaacctgagtaggcagccaaccagttgaacacccattcatcatcattggccaacttgcctcattcacctacttcacaatcattctagtcctattcccacttgcatccatcctagaaaacaagatacttaaactctaa----- Cettia_diphone_4_AB159196 atggccctcaaccttcgtaaaaaccacccactactaaaaatcatcaacgactccctaattgacctcccaaccccctcaaacatctccacctgatgaaattttggatcactcctaggaatctgtctagtcacacaaatcgtcacaggcctcctactagccatgcactacacagcagacacctccctagccttcgcctccgtcacccacatatgccgcaatgtccaatttgggtgactaatccgtaacctacacgcaaacggagcttccttcttctttatctgcatttacttccacattggccgaggactatactacggctcatacctaaataaagaaacctgaaacatcggagtaatcctcttactagccctcatagcaactgccttcgtaggctatgtcctaccatgaggacaaatatccttctgaggagccacagtaatcaccaacctattctcagcaatcccatacatcggccaaacattagtagaatgactatgaggcggattctcggtagacaaccccactctaacccgattctttgctatccacttcctcctgccattcgttatcgcaggacttacattagtccacctcaccttcctacacgaaacaggctcaaacaacccactgggcatcccatcggactgcgacaaaatcccattccacccatactactccacaaaagacatcctagggttcgcattcatactcatctccctagccgctcttgccctattctcccccaacctcctgggagacccagaaaacttcacaccagccaaccccctagccacgcccccccacatcaaacccgaatgatacttcctatttgcctacgccattcttcgatccatcccaaacaaactaggcggagtactagccctcgccgcctccgtcctagtcctattcctcatcccactactacacacatccaaactacgctcaataaccttccgccccctatcacaaatcctattctgaaccctagtcgccaacctcctcatcctaacctgagtaggcagccaaccagttgaacacccattcatcatcattggccaacttgcctcattcacctacttcacaatcattctagtcctattcccacttgcatccatcctagaaaacaagatacttaaactctaa----- Cettia_diphone_5_AB159195 atggccctcaaccttcgtaaaaaccacccactactaaaaatcatcaacgactccctaattgacctcccaaccccctcaaacatctccacctgatgaaattttggatcactcctaggaatctgtctagtcacacaaatcgtcacaggcctcctactagccatgcactacacagcagacacctccctagcctttgcctccgtcacccacatatgccgcaatgtccaatttgggtgactaatccgtaacctacacgcaaacggagcttccttcttctttatctgcatttacttccacattggccgaggactatactacggctcatacctaaataaagaaacctgaaacatcggagtaatcctcttactagccctcatagcaactgccttcgtaggctatgtcctaccatgaggacaaatatccttctgaggagccacagtaatcaccaacctattctcagcaatcccatacatcggccaaacattagtagaatgactatgaggcggattctcggtagacaaccccactctaacccgattctttgctatccacttcctcctgccattcgttatcgcaggacttacattagtccacctcaccttcctacacgaaacaggctcaaacaacccactgggcatcccatcggactgcgacaaaatcccattccacccatactactccacaaaagacatcctagggttcgcattcatactcatctccctagccgctcttgccctattctcccccaacctcctgggagacccagaaaacttcacaccagccaaccccctagccacgcccccccacatcaaacccgaatgatacttcctatttgcctacgccattcttcgatccatcccaaacaaactaggcggagtactagccctcgccgcctccgtcctagtcctattcctcatcccactactacacacatccaaactacgctcaataaccttccgccccctatcacaaatcctattctgaaccctagtcgccaacctcctcatcctaacctgagtaggcagccaaccagttgaacacccattcatcatcattggccaacttgcctcattcacctacttcacaatcattctagtcctattcccacttgcatccatcctagaaaacaagatacttaaactctaa----- Cettia_diphone_6_AB159194 atggccctcaaccttcgtaaaaaccacccactactaaaaatcatcaacgactccctaattgacctcccaaccccctcaaacatctccacctgatgaaattttggatcactcctaggaatctgtctagtcacacaaatcgtcacaggcctcctactagccatgcactacacagcagacacctccctagccttcgcctccgtcacccacatatgccgcaatgtccaatttgggtgactaatccgtaacctacacgcaaacggagcttccttcttctttatctgcatttacttccacattggccgaggactatactacggctcatacctaaataaagaaacctgaaacatcggagtaatcctcttactagccctcatagcaactgccttcgtaggctatgtcctaccatgaggacaaatatccttctgaggagccacagtaatcaccaacctattctcagcaatcccatacatcggccaaacattagtagaatgactatgaggcggattctcggtagacaaccccactctaacccgattctttgctatccacttcctcctgccattcgttatcgcaggacttacattagtccacctcaccttcctacacgaaacaggctcaaacaacccactgggcatcccatcggactgcgacaaaatcccattccacccatactactccacaaaagacatcctagggttcgcattcatactcatctccctagccgctcttgccctattctcccccaacctcctgggagacccagaaaacttcacaccagccaaccccctagccacgcccccccacatcaaacccgaatgatacttcctatttgcctacgccattctccgatccatcccaaacaaactaggcggagtactagccctcgccgcctccgtcctagtcctattcctcatcccactactacacacatccaaactacgctcaataaccttccgccccctatcacaaatcctattctgaaccctagtcgccaacctcctcatcctaacctgagtaggcagccaaccagttgaacacccattcatcatcattggccaacttgcctcattcacctacttcacaatcattctagtcctattcccacttgcatccatcctagaaaacaagatacttaaactctaa----- Cettia_diphone_7_D38315 --------------------------------------------------------------------------------------------------------------------------------------------------------------catgcactacacagcagacacctccctagccttcgcctccgtcacccacatatgccgcaatgtccaatttgggtgactaatccgtaacctacacgcaaacggagcttccttcttctttatctgcatttacttccacattggccgaggactatactacggctcatacctaaataaagaaacctgaaacatcggagtaatcctcttactagccctcatagcaactgccttcgtaggctatgtcctaccatgaggacaaatatccttctgaggagccacagtaatcaccaacctattctcagcaatcccatacatcggccaaacattagtagaatgactatgaggcggattctcggtagacaaccccactctaacccgattctttgctatccacttcctcctgccattcgttatcgcaggacttacattagtccacctcaccttcctacacgaaacaggctcaaacaacccactgggcatcccatcggactgcgacaaaatcccattccacccatactactccacaaaagacatcctagggttcgcattcatactcatctccctagccgctcttgccctattctcccctaacctcctgggagacccagaaaacttcacaccagctaaccccctagccacgcccccccac-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cettia_haddeni_AMNH836189_DQ066451 ATGGCCCTCAACCTTCGTAAAAACCACCCACTACTAAAAACCATCAACGACTCCCTAATCGATCTCCCAACCCCATCAAACATCTCCACCTGATGAAACTTTGGATCCCTCCTAGGAATCTGTCTAATCACACAAATCATCACAGGCCTCCTACTAGCCATGCACTACACAGCAGACACCTCCCTAGCCTTCGCCTCCGTCACCCACATGTGCCGCAACGTCCAATTTGGATGACTAATCCGTAACCTACACGCAAACGGAGCTTCTTTATTCTTTATCTGCATTTACTTTCACATTGGCCGAGGACTATACTACGGCTCATACCTAAACAAAGAAACCTGAAACATCGGAGTAATCCTCTTACTAGCCCTCATAGCAACTGCTTTCGTAGGTTATGTCCTGCCATGAGGACAAATATCCTTCTGAGGAGCCACAGTAATTACCAACCTGCTCTCAGCAATCCCATACATCGGCCAAACATTAGTAGAATGACTATGAGGCGGATTCTCAGTAGATAACCCCACTCTAACCCGATTCTTCGCCATCCACTTCCTCCTACCATTCGTCATCGTGGGAATTACATTAGTACACCTCACCTTCCTACACGAAACAGGTTCAAACAACCCATTAGGCATCCCATCGGACTGCGACAAAATCCCATTCCACCCGTACTACTCCACAAAAGACATCCTAGGATTCGCGTTCATACTTATCTCCCTAGTCGCTCTTGCTCTATTCTCCCCCAACCTGCTAGGGGACCCAGAAAACTTCACACCAGCCAACCCCCTAGCCACACCCCCCCACATCAAACCCGAATGATACTTCCTATTTGCCTATGCCATTCTTCGATCTATCCCAAACAAACTAGGTGGAGTACTAGCCCTCGCCGCTTCCGTCCTAGTCCTATTCCTCATTCCACTTCTACATACATCCAAACTGCGCTCAATAACCTTCCGCCCCCTATCACAAATCCTATTCTGAACCCTAGTCGCCGACCTCCTCATCCTAACCTGAGTAGGCAGCCAACCAGTTGAACACCCATTCATCATCATTGGCCAACTTGCCTCATTCGCCTACTTCACAATCATTCTAATCCTATTCCCCCTTGCATCCATCCTAGAAAACAAGATACTTAAACTCTAGCCAAC Cettia_parens_AMNH228061_DQ288966 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCTCCCTAGCCTTCGCCTCCGTCACCCACATGTGCCGCAACGTCCAATTTGGATGACTAATCCGTAACCTACACGCAAACGGAGCTTCCCTCTTCTTTATCTGCATTTACTTCCACATTGGCCGAGGACTATACTACGGCTCATACCTGAACAAAGAGACCTGAAACATCGGAGTAATCCTCTTACTAGCCCTCATAGCAACTGCTTTCGTAGGTTATGTCCTACCATGAGGACAAATATCCTTCTGAGGTGCCACAGTAATCACCAACCTACTCTCAGCAATCCCATACATCGGTCAAACACTAGTAGAATGACTATGAGGCGGATTCTCAGTAGATAACCCCACCCTAACTCGATTCTTCGCTATCCACTTTCTCCTACCATTCGTTATCGTAGGCCTTACATTAGTCCACCTCACCTTCCTACACGAAACAGGCTCAAACAACCCACTAGGCATCCCATCGGACTGCGACAAAATCCCATTCCACCCATACTACTCCACAAAAGACATCCTAGGATTCGCATTCATACTTATCTCCCTAGTCGCCCTCGCCCTATTCTCCCCCAACCTGCTAGGAGACCCAGAAAACTTCACACCAGCCAACCCCCTAGCCACACCCCCTCACATCAAACCCGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cettia_parens_AMNH228065_DQ288967 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCTCCCTAGCCTTCGCCTCCGTCACCCACATGTGCCGCAACGTCCAATTTGGATGACTAATCCGTAACCTACACGCAAACGGAGCTTCCCTCTTCTTTATCTGCATTTACTTCCACATTGGCCGAGGACTATACTACGGCTCATACCTGAACAAAGAGACCTGAAACATCGGAGTAATCCTCTTACTAGCCCTCATAGCAACTGCTTTCGTAGGTTATGTCCTACCATGAGGACAAATATCCTTCTGAGGTGCCACAGTAATCACCAACCTACTCTCAGCAATCCCATACATCGGTCAAACACTAGTAGAATGACTATGAGGCGGATTCTCAGTAGATAACCCCACCCTAACTCGATTCTTCGCTATCCACTTTCTCCTACCATTCGTTATCGTAGGCCTTACATTAGTCCACCTCACCTTCCTACACGAAACAGGCTCAAACAACCCACTAGGCATCCCATCGGACTGCGACAAAATCCCATTCCACCCATACTACTCCACAAAAGACATCCTAGGATTCGCATTCATACTTATCTCCCTAGTCGCCCTCGCCCTATTCTCCCCCAACCTGCTAGGAGACCCAGAAAACTTCACACCAGCCAACCCCCTAGCCACACCCCCTCACATCAAACCCGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cettia_ruficapilla_AMNH224390_DQ288968 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCTCCCTAGCCTTCGCCTCCGTCACCCACATGTGCCGCAACGTCCAATTTGGATGACTAATCCGTAACCTACACGCAAACGGAGCTTCTCTATTCTTTATCTGCATTTACTTTCACATCGGCCGAGGACTATACTACGGCTCATACCTAAACAAAGAAACCTGAAACATCGGAGTAATCCTCTTACTAGCCCTCATAGCAACTGCTTTCGTAGGTTATGTCCTACCATGAGGACAAATATCCTTCTGAGGGGCCACAGTAATCACCAACCTACTCTCAGCAATCCCATACATCGGCCAAACATTAGTAGAATGACTATGAGGCGGATTCTCAGTAGATAACCCCACCCTAACCCGATTCTTCGCTATCCACTTTCTCCTACCATTCGTTATCGTAGGACTTACATTAGTCCACCTCACCTTCCTACACGAAACAGGTTCAAACAACCCACTAGGCATCCCATCAGATTGCGACAAAATCCCATTCCACCCATACTACTCCACAAAAGACATCCTAGGATTCGCATTCATACTTGTCTCCCTGGTCGCTCTCGCTCTATTCTCCCCCAACCTGCTAGGAGACCCAGAAAACTTCACACCAGCCGACCCCCTAGCCACGCCCCCCCACATCAAACCTGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cettia_ruficapilla_AMNH251968_DQ288969 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCTCCCTAGCCTTCGCCTCCGTCACCCACATGTGCCGCAACGTCCAATTTGGATGACTAATCCGTAACCTACACGCAAACGGAGCTTCTCTATTCTTTATCTGCATTTACTTTCACATCGGCCGAGGACTATACTACGGCTCATACCTAAACAAAGAAACCTGAAACATCGGAGTAATCCTCTTACTAGCCCTCATAGCAACTGCTTTCGTAGGTTATGTCCTACCATGAGGACAAATATCCTTCTGAGGGGCCACAGTAATCACCAACCTACTCTCAGCAATCCCATACATCGGCCAAACATTAGTAGAATGACTATGAGGCGGATTCTCAGTAGATAACCCCACCCTAACCCGATTCTTCGCTATCCACTTTCTCCTACCATTCGTTATCGTAGGACTTACATTAGTCCACCTCACCTTCCTACACGAAACAGGTTCAAACAACCCACTAGGCATCCCATCAGATTGCGACAAAATCCCATTCCACCCATACTACTCCACAAAAGACATCCTAGGATTCGCATTCATACTTGTCTCCCTGGTCGCTCTCGCTCTATTCTCCCCCAACCTGCTGGGAGACCCAGAAAACTTCACACCAGCCGACCCCCTAGCCACGCCCCCCCACATCAAACCTGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cettia_annae_AMNH332080_DQ288970 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCTCCCTAGCCTTTGCCTCCGTCACCCACATATGCCGCAACGTCCAATTTGGGTGATTAATCCGTAACCTACACGCAAACGGAGCCTCTTTCTTCTTCATCTGCATTTACTTTCACATTGGCCGAGGACTATACTACGGCTCATACCTAAACAAAGAAACCTGAAACATCGGAGTAATCCTCTTACTAGCCCTCATAGCAACTGCTTTCGTAGGTTATGTCCTACCATGAGGACAAATATCCTTCTGAGGAGCCACAGTAATCACCAACCTGTTCTCAGCAATCCCATACATCGGCCAAACACTAGTAGAATGACTATGAGGCGGATTCTCAGTAGATAACCCCACCCTAACCCGATTCTTCGCTATCCACTTCCTACTACCATTCGTCATCGTAGGACTTACATTAGTCCACCTCACCTTCCTACACGAAACAGGTTCAAACAACCCACTAGGTATCCCATCGGACTGCGACAAAATCCCATTCCACCCGTACTACTCCACAAAAGACATCCTAGGATTCGCATTCATACTTATCTCCCTAGTCGCTCTCGCCCTATTCTCCCCCAATCTGCTAGGAGACCCAGAAAACTTCACACCAGCCAACCCCCTAGCCACACCCCCCCACATTAAACCCGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cettia_annae_AMNH332081_DQ288971 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCTCCCTAGCCTTTGCCTCCGTCACCCACATATGCCGCAACGTCCAATTTGGGTGATTAATCCGTAACCTACACGCAAACGGAGCCTCTTTCTTCTTTATCTGCATTTACTTTCACATTGGCCGAGGACTATACTACGGCTCATACCTAAACAAAGAAACCTGAAACATCGGAGTAATCCTCTTACTAGCCCTCATAGCAACTGCTTTCGTAGGTTATGTCCTACCATGAGGACAAATATCCTTCTGAGGAGCCACAGTAATCACCAACCTGTTCTCAGCAATCCCATACATCGGCCAAACACTAGTAGAATGACTATGAGGCGGGTTCTCAGTAGATAACCCCACCCTAACCCGATTCTTCGCTATCCACTTCCTACTACCATTCGTTATCGTAGGACTTACATTAGTCCACCTCACCTTCCTACACGAAACAGGTTCAAACAACCCACTAGGTATCCCATCGGACTGCGACAAAATCCCATTCCACCCGTACTACTCCACAAAAGACATCCTAGGATTCGCATTCATACTTATCTCCCTAGTCGCTCTCGCCCTATTCTCCCCCAATCTGCTAGGAGACCCAGAAAACTTCACACCAGCCAACCCCCTAGCCACACCCCCCCACATTAAACCCGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Aegithalos_caudatus_AB159169 atggctctcaatcttcgtaaaaaccaccccctactaaaaatcatcaatgactccctaattgatcttcctacaccatcaaacatctctatctgatgaaatttcggctcactcctaggcctctgcctcgtcacacaaatcgtaacaggcctactattagctatacactatacagcagacacttccctagccttcgcctctgtatctcacatatgtcgaaatgttcaattcggctgacttatccgcaatctacacgcaaacggagcttccttcttcttcatctgcatttacttccacatcggccgaggcttctattacggctcatacctcaacaaagaaacctgaaacatcggagttattctcctactcacactcatagcaactgccttcgtaggttacgtgctaccttgaggacaaatatcattttgaggagctacagtaatcacaaatctattttcagccatcccatacattggccagacactagtagaatgggcatgaggcggcttttcagtagataaccctacactaacccgattcttcgccatccacttcctcctaccattcatcatcgcaggccttacactcgtacatctcacactcctccacgaaaccgggtcaaacaaccccttaggcatcccatcagactgcgataaaatcccattccacccatactactctacaaaagatatcctaggattcgcactcacactaattctcctaactagcttagctctattctcccccaacctactaggcgacccagaaaactttacaccagccaaccccctagctacccccccacatattaaacccgaatgatacttcctattcgcctacgccattctccgatccatcccaaataaactaggtggagtactagctctggctgcatccgtattagtcctattcctcatccctctccttcacacctctaaactacgctcaataaccttccgtcccctatctcaaatcctattttgagctttagtagccaacctccttgtccttacctgagtgggaagccaaccagttgaacatccattcatcatcattggacaactagcctcactatcctacttcacaatcatcctaatcctattcccccttgtatcgatcctagaaaataaaatcctaaaactctaa----- Psaltriparus_minimus_AF074597 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tccgtcgcccatatatgccgagacgtccaattcggatgactcatccgcaacctacacgcgaacggagcttctttcttctttatctgcatctacttccacattggtcgaggattctactacggctcatacctcaacaaagaaacctgaaatgtcggagttgttctcctactgacactaatagcaactgccttcgtagggtacgacctaccctgaggccaaatatcattctgaggcgctacggtaattacaaacctattctcagcaattccatacatcggccaaacactagtagaatgagcatgaggtggattctcagtagacaaccccacactaactcgattcttcgccctccatttcctcctcccctttgtaatcacaggccttacattagttcacctcactctgctacacgaaaccggatcaaataacccactaggaatcccatccgattgcgataaaatcccattccacccatactactcaacaaaagacatccttggatttgcactcatgctagtccttctagtctccctagccctattctcccctaacctactaggcgacccagaaaacttcacaccagccaaccccctagccactcccccccatattaaacccgagtgatacttcctatttgcctacgccattctacgatctatcccaaacaaactaggaggagtactagctctagctgcctccgtactagtcctattcctaatccccctactacatacttccaaactacgctcaataacctttcgtcccctatcccaaatcttattttgagccctagtagccaacctcctcgtcctaacttgagtaggaagccaaccagttgaacacccattcatcatcattggacaactagcctcattaagctacttcacaatcatcctagttctattt----------------------------------------------- ; END; BEGIN SETS; CHARSET cytb_included = 177 - 816; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS; TYPESET * UNTITLED = unord: 1 - 1148; END; BEGIN PAUP; OUTGROUP 23 24; EXCLUDE ALL; INCLUDE cytb_included; END; BEGIN CODONS; CODONPOSSET * UNTITLED = N: 1- 1148 ; CODONPOSSET CodonPositions = N: 1- 1148 ; CODESET * UNTITLED = universal: 1 - 1148; END; BEGIN TREES; Title Cettia_cytb; LINK Taxa = Taxa; TRANSLATE 1 Urosphena_squameiceps_1_AB159178, 2 Urosphena_squameiceps_2_AB159177, 3 Urosphena_squameiceps_3_AB159179, 4 Cettia_cetti_1_AJ004313, 5 Cettia_cetti_2_AJ004312, 6 Cettia_cetti_3_AJ004311, 7 Cettia_cetti_4_AJ004798, 8 Cettia_fortipes_L77122, 9 Cettia_diphone_1_AB159199, 10 Cettia_diphone_2_AB159198, 11 Cettia_diphone_3_AB159197, 12 Cettia_diphone_4_AB159196, 13 Cettia_diphone_5_AB159195, 14 Cettia_diphone_6_AB159194, 15 Cettia_diphone_7_D38315, 16 Cettia_haddeni_AMNH836189_DQ066451, 17 Cettia_parens_AMNH228061_DQ288966, 18 Cettia_parens_AMNH228065_DQ288967, 19 Cettia_ruficapilla_AMNH224390_DQ288968, 20 Cettia_ruficapilla_AMNH251968_DQ288969, 21 Cettia_annae_AMNH332080_DQ288970, 22 Cettia_annae_AMNH332081_DQ288971, 23 Aegithalos_caudatus_AB159169, 24 Psaltriparus_minimus_AF074597; TREE PAUP_1 = ((((1:0.004903,2:0.0):4.12E-4,3:0.002848):0.04705,((((4:0.018457,5:0.0):0.0,7:0.044119):0.0,6:0.0):0.158841,(8:0.080997,(((9:0.0,10:0.0):0.014027,(11:0.0,(12:0.0,13:0.001628,14:0.0,15:0.003318):0.001632):0.017643):0.012758,(((16:0.025578,(19:0.0,20:0.001617):0.018732):0.004894,(17:0.0,18:0.0):0.022281):0.004362,(21:0.003326,22:0.001587):0.019287):0.008844):0.039731):0.027638):0.007643):0.092619,23:0.140947,24:0.122934); END;