#NEXUS [written Sun Oct 02 15:49:30 CEST 2011 by Mesquite version 2.75 (build 564) at administrators-macbook.local/10.0.1.3] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=43; TAXLABELS Albinaria_caerulea_AY546342_GR Arianta_arbustorum_AY546343_CH Arianta_arbustorum_JF717809_FR Arianta_arbustorum_JF717810_NL Caracollina_lenticula_AY546345_ES Caracollina_lenticula_JF717811_IT Cepaea_nemoralis_AY546350_DE Chilostoma_cingulatum_AY546354_IT Chilostoma_cingulatum_JF717812_AT Chilostoma_cingulatum_JF717813_IT Cochlicella_acuta_AY546355_FR Cochlicella_acuta_AY741442_IT Cochlicella_acuta_AY741443_IT Eobania_vermiculata_AY546357_FR Eobania_vermiculata_AY741409_IT Helicigona_lapicida_andorrica_JF717814_ES Helicigona_lapicida_andorrica_JF717815_ES Helicigona_lapicida_andorrica_JF717816_ES Helicigona_lapicida_AY546360_DE Helicigona_lapicida_lapicida_JF717817_BE Helicigona_lapicida_lapicida_JF717818_DE Helicodonta_obvoluta_AY546361_CH Helicodonta_obvoluta_JF717819_NL Helicopsis_striata_AY546362_DE Iberus_gualterianus_AY546365_ES Iberus_gualtierianus_gualtierianus_DQ822116_ES Iberus_marmoratus_EF440214_ES Isognomostoma_isognomostoma_AY546366_DE Isognomostoma_isognomostos_JF717820_IT Isognomostoma_isognomostos_JF717821_IT Marmorana_signata_JF717822_IT Oestophora_turriplana_AY546369_PT Otala_lactea_AY937264_ES Otala_punctata_AY546370_ES Otala_punctata_JF717823_ES Otala_punctata_JF717824_ES Otala_punctata_JF717825_ES Pseudotachea_splendida_AY546372_ES Pseudotachea_splendida_AY937266_ES Zonites_algirus_AY546381_FR Zonites_algirus_JF717826_GR Zonites_casius_EF568987_GR Zonites_pergranulatus_cycladicus_EF568963_GR ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=326; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Albinaria_caerulea_AY546342_GR GACTTTTAAATGGAGCCTAGAATGAAAGAAA-GAACGTATGCAACTTGTCT--CATTGATATTACTTTAAATTTAATGGTTGAGTGAAAATACTCATAAT--TTAATAATAGACGAGAAGACCCTTAGAATTTTTAAAAGCAATAACTAATT-CTTATTAGATTTTTTGTTGGGGCAACAATATTTCAAAT--------------AATAAATA-TAT-TAATGAAAGTAATAAGTCGAATAA---ATAATTATAG----AAAAATTACTCTAGGGATAACAGCATAATTTATTAATAAGCTTGTGACCTCGATGTTGGACTAGGTT Arianta_arbustorum_AY546343_CH GACTTATAATTGAAGTCTAGAATGAATGAAT-ATACGGGCAGCGACTGTCT--CAGGAGTA-TTTTACTAACTTAGTTACCAAGTGCAAATACTTGAAGT--TATAAAAAAGACGAGAAGACCCTAGAAACTTTATTTTA------------------------TTTTGTTGGGGCGACAGAATTACAATAT-------------AACTAA---TTT-TA-------TATTACAAGAAATAT---AAGGGAAAGA----ACAAGTTACTCTAGGGATAACAGCATAATTTAATC-TAAGTTTGTGACCTCGATGTTGGACTAGGTA Arianta_arbustorum_JF717809_FR GACTTATAATTGAAGTCTAGAATGAATGAAT-ATACGGGCAGCAACTGTCT--CAGAAGTATTTTAATTAATTTAGTTACCAAGTGCAAATACTTGAAGT--TATAAAAAAGACGAGAAGACCCTAGAAACTTTAATTAA------------------------TTTTGTTGGGGCGACAGAATTACAATATA------------AACTAA---TTT-TA-------TATTACAAGAAACAT---AGGCGGAAGA----ACAAGTTACTCTAGGGATAACAGCATAATTTAATC-TAAGTTTGTGACCTCGATGTTGGACTAGGTA Arianta_arbustorum_JF717810_NL GACTTATAATTGAAGTCTAGAATGAATGAAT-ATACGGGCAGCAACTGTCT--CAGAAGTATTTTAATTAATTTAGTTACTAAGTGCAAATACTTGAAGT--TATAAAAAAGACGAGAAGACCCTAGAAACTTTAATTAA------------------------TTTTGCTGGGGCGGCAGAATTACAATATA------------AACTAA---TTT-TA-------TATTACAAGAAACAT---AGAAGGAAGA----ACAAGTTACTCTAGGGATAACAGCATAATTTAATC-TAAGTTTGTGACCTCGATGTTGGACTAGGTA Caracollina_lenticula_AY546345_ES GGCTTGTAATTGAAGTCTAGTATGAAAGAAG-TTACGGGTAGCTACTGTCT--TAAAAGGAGTTAAGTAAATTTAGTCATAAAGTGCAAATACTTTTAAA--TATAGAAAAGACGAGAAGACCCTAGAAACTTTAAAT--------------------------TTTTGTTGGGGCGACAAATCTACAGTGA-------------AACTAG---ATT-TA-------AAAAACTTGAAACAAA--AGGGGAAAGA----TTAAGTTACTTTAGGGATAACAGCATAATGAAAAA-T-CGTTTGGGACCTCGATGTTGGACTAGGTT Caracollina_lenticula_JF717811_IT GGCCTATAATTGAGGTCTGGCATGAATGGAA-ACCTGGGTAAAATCTGTCT--TATCCTAA-TTAATAAAACTTACTTAATAAGTGCAAATACTTATGTATTAATATAATAGACGAGAAGACCCTAGAAATTTTATATAATGTAGTGACTCGGTACTACTA---TTTTGTTGGGGCGACAGGATAACAAAT--------------AACTTA---TCCATA-------TATAATTTGAAGTTAC--TCAGCATATA----AATAATTACTCTAGGGATAACAGCATAATTTGTTT-CAAGTTTGTGACCTCGATGTTGGACTAGGGT Cepaea_nemoralis_AY546350_DE GGCTTATAATTGAAGTCTGGTATGAAAGAAC-TCATGGGAGGTAACTGTCT--CCAGGGTA-TAGTACTAAATTAGTAAGTAAGTGAAAATACTTACGA---GAGAAAATAGACGAGAAGACCCTAGAAGCTTGCTATTTG-----------------------TTTTGTTGGGGCGACAGAATTGCATTT--------------AAACCA---ATTTTA--------TAGATGTGACGAG----AGCAGGAAAA----TTAAGCTACTCTAGGGATAACAGCATAATAAAATT---TGTTTGTGACCTCGATGTTGGACTAGGTA Chilostoma_cingulatum_AY546354_IT GGCTTATAATTGAAGTCTAGAATGAACGAAA-TAACGGGTAGTAGCTGTCT--CATAAATAATATTAC-AATTTAGTAAGTAAGTGCAAAAACTTACAAC--ATTATAATAGACGAGAAGACCCTAGAAATTTTTATATAAGT---------------------TTTTGTTGGGGCGGCAGAGTTATATAATGTTGTAAGTTTTGCACTTA---CTT-TA-------TATAACATGTAGTAA---------AAGA----GACAGATACTCTAGGGATAACAGCATAATTTTAA----AGTTTGTGACCTCGATGTTGGACTAGGAA Chilostoma_cingulatum_JF717812_AT GACTTATAATTGAAGTCTGGCATGAACGAAT-TTACGGGTAACGACTGTCT--TAGGGAAAAATTAAAGAATTTAATTATCAAGTGCAAATGCTTGAGGA--CTTAAAATAGACGAGAAGACCCTAGAAACTTTAAA---------------------------TTTTGTTGGGGCGACAAAATTACACGG--------------AACTAA---TTTTAA-------TATTACGTGAAGCGT---AGAAGAAAGA----TTAAGTTACTCTAGGGATAACAGCATAATTTATAA-T-AGTTTGTGACCTCGATGTTGGACTAGGTA Chilostoma_cingulatum_JF717813_IT GACTTATAATTGAAGTCTGGCATGAACGAAT-TTACGGGTAACGACTGTCT--TAGGGAAAAATTAAAGAATTTAATTATCAAGTGCAAATGCTTGAGGA--CTTAAAATAGACGAGAAGACCCTAGAAACTTTAAA---------------------------TTTTGTTGGGGCGACAAAATTACACGG--------------AACTAA---TTTTAA-------TATTACGTGAAGCGT---AGAAGAAAGA----TTAAGTTACTCTAGGGATAACAGCATAATTTATAA-T-AGTTTGTGACCTCGATGTTGGACTAGGTA Cochlicella_acuta_AY546355_FR GGCTTATAATTGAAGTCCGGCATGAATGAAG-TTACGGGTAGCTACTGTCT--TAAGAAGAGTAAGGTAATTTTAGTTACTAAGTGCAAATCCTTATAAA--CAAAGAAAAGACGAGAAGACCCTAGAAACTTTAGAA--------------------------TTTTGTTGGGGCGACAGGTCTACAGTGA-------------AACTAC---GAC-TT-------ATAAACTTGAAACAAC--TGGTGTAAGA----TTAAGTTTCTCTAGGGATAACAGCATAA-GATAAA-T-CGTTTGTGACCTCTATGTTGGACTAGGTT Cochlicella_acuta_AY741442_IT GGCTTGTAATTTAAGTCTGGTATGAATGTAG-TTTTAGGCTAAAGCTGTCT--CTTTATAT-TAATTGGAATTTACTTAGCCGGTGAAAATGCCGGCAGT--TAAATAATAGACGAGAAGACCCTAGAAATTTTGTGAAAGGTACAAGTAG--TATGTATTGGATTTTGTTGGGGCGACAGAGTAACAATTTA------------AACTTA---CTC-TA-------TTTAATGTGAATTAG---TTATGGAAGT----GTAAATTACTCTAGGGATAACAGCATAATTCTATT-AGTGTTTGTGACCTCGATGTTGGACTAGGAA Cochlicella_acuta_AY741443_IT GGCTTGTAATTTAAGTCTGGTATGAATGTAG-TTTTAGGCTAAAGCTGTCT--CTTTATAT-TAATTGGAATTTACTTAGCCGGTGAAAATGCCGGCAGT--TAAATAATAGACGAGAAGACCCTAGAAATTTTTTGAAAGGTATAAATAG--TATGTATTGGATTTTGTTGGGGCGACAGAGTAACAGTTTA------------AACTTA---CTC-TA-------TTTAATGTGAATTAG---TTATGGAAGT----GTAAATTACTCTAGGGATAACAGCATAATTCTATT-AGTGTTTGTGACCTCGATGTTGGACTAGGAA Eobania_vermiculata_AY546357_FR GGCTTCTAATTAAAGTCTGGAATGAACGAAC-TCATGGGTAGCAACTGTCT--CTAAAATA-GTTTATTAAATTGATCAATAAGTGCAAATACTTATTCA--ATTATAATAGACGAGAAGACCCTAGAAACTTATAATTA------------------------TTTTGTTGGGGCGACAGAATTACATAA--------------AACTAA---TTT-TA-------TTTTACGGGACGTAA---AACACCCACA----AAAAGTTACTCTAGGGATAACAGCATAATTTT----------------------------------A Eobania_vermiculata_AY741409_IT GGCCTCTAATTAAGGTCTGGAATGAACGAAC-TTATGGGTAGCAACTGTCT---TAAAATA-GTTAATTAAATTGATTAATAAGTGCAAATACTTATTCA--GTTACATTAGACGAGAAGACCCTAGAAACTTATAATTA------------------------TTTTGTTGGGGCGACAGAATTACATAA--------------AACTAA---TTT-TA-------TTTTACAAGACGTAA---AGCAGAAAGA----AAAAGTTACTCTAGGGATAACAGCATAATTTTTTA-T-AGCTTGTGACCTCGATGTTGGACTAGGTA Helicigona_lapicida_andorrica_JF717814_ES GGCTTGTAATTGAAGTCTAGTATGAAAGAAG-TTACGGGTAGCTACTGTCT--TAAGAGGAGTTAAGTAAATTTAGTCATAAAGTGCAAATACTTTTAAA--CATAGAAAAGACGAGAAGACCCTAGAAACTTTAAA---------------------------TTTTGTTGGGGCGACAAATCTACAGTGA-------------AACTAG---ATT-TA-------AAAAACTTGAAACAAA--AGGCGAAAGA----TTAAGTTACTCTAGGGATAACAGCATAATGAAAAA-T-CGTTTGTGACCTCGATGTTGGACTAGGTT Helicigona_lapicida_andorrica_JF717815_ES GGCTTGTAATTGAAGTCTAGTATGAAAGAAG-TTACGGGTAGCTACTGTCT--TAAGAGGAGTTAAGTAAATTTAGTCATAAAGTGCAAATACTTTTAAA--CATAGAAAAGACGAGAAGACCCTAGAAACTTTAAA---------------------------TTTTGTTGGGGCGACARATCTACAGTGA-------------AACTAG---ATT-TA-------AAAAACTTGAAACAAA--AGGCGAAAGA----TTAAGTTACTCTAGGGATAACAGCATAATGAAAAA-T-CGTTTGTGACCTCGATGTTGGACTAGGTT Helicigona_lapicida_andorrica_JF717816_ES GGCTTGTAATTGAAGTCTAGTATGAAAGAAG-TTACGGGTAGCTACTGTCT--TAAGAGGAGTTAAGTAAATTTAGTCATAAAGTGCAAATACTTTTAAA--CATAGAAAAGACGAGAAGACCCTAGAAACTTTAAA---------------------------TTTTGTTGGGGCGACAGATCTACAGTGA-------------AACTAG---ATT-TA-------AAAAACTTGAAACAAA--AGGCGAAAGA----TTAAGTTACTCTAGGGATAACAGCATAATGAAAAA-T-CGTTTGTGACCTCGATGTTGGACTAGGTT Helicigona_lapicida_AY546360_DE GGCTTATAATTGAAGTCTTGTATGAACGAAT-TAATGGGTAATAACTGTCT--GTTAAAGT-TTAATAGAAATTATTTAGCAAGTGAAAATACTTGTAGA--TAACTAATAGACGAGAAGACCCTAGAAATTTTATATAATATAGTGT-----GTTTATTATTATTTTGTTGGGGCGACAGAATAACAAAT--------------AACTTA---TTT-TA-------TTTGATTAGCACTATTTAATGAGAAAAA----TTAAATTACTCTAGGGATAACAGCATAATTTTTA--TAAGTTTGTGACCTCGATGTTGGACTAGGGA Helicigona_lapicida_lapicida_JF717817_BE GGCTTATAATTGAAGTCTGGCATGAATGAAG-TTACGGGTAGCTACTGTCT--TAAGAAGAGTAAGGTAATTTTAGTTATTAAGTGCAAATACTTATAAA--CAAAGAAAAGACGAGAAGACCCTAGAAACTTTAGAA--------------------------TTTTGTTGGGGCGACAGGTCTACAGTGA-------------AACTAG---ATT-TA-------CAAAACTTGAAACAAC--TGGCGTAAGA----TTAAGTTACTCTAGGGATAACAGCATAATGATAAA-T-CGTTTGTGACCTCGATGTTGGACTAGGTT Helicigona_lapicida_lapicida_JF717818_DE GGCTTATAATTGAAGTCTGGCATGAATGAAG-TTACGGGTAGCTACTGTCT--TAAGAAGAGTAAGGTAATTTTAGTTATTAAGTGCAAATACTTATAAA--CAAAGAAAAGACGAGAAGACCCTAGAAACTTTAGAA--------------------------TTTTGTTGGGGCGACAGGTCTACAGTGA-------------AACTAG---ACT-TA-------TAAAACTTGAAACAAC--TGGTGTAAGA----TTAAGTTACTCTAGGGATAACAGCATAATGATAAA-T-CGTTTGTGACCTCGATGTTGGACTAGGTT Helicodonta_obvoluta_AY546361_CH GGCTTATAATTGAAGTCTGGTATGAATGAAT-ATATGGGTACCAACTGTCT--CCACTATA-TAACATGAATTTACTGATTGGGTGCAAATTCCCATTTC--AAGATAATAGACGAGAAGACCCTAGAAATTTTCAATTACACT--------------------TTTTGCTGGGGCGGCAGAATAACACAA--------------AACTTA---TTT-TA------CTATATTATCTAATAT---ATTATGGAAA----AACAATTACTCTAGGGATAACAGCATAATTTATTT---AGTTTGTGACCTCGATGTTGGACTAAGGT Helicodonta_obvoluta_JF717819_NL GGCTTATAATTGAAGTCTGGTATGAATGAAT-ATATGGGTACCAACTGTCT--CCATTATA-TAACATGAATTTACTGATTGGGTGCAAATTCCCATTTC--AAGATAATAGACGAGAAGACCCTAGAAATTTTCAATTACACT--------------------TTTTGCTGGGGCGGCAGAATAACACAA--------------AACTTA---TTT-TA------CTATATTATCTAATAT---ATTATGGAAA----AACAATTACTCTAGGGATAACAGCATAATTTATTT---AGTTTGTGACCTCGATGTTGGACTAAGGT Helicopsis_striata_AY546362_DE GGCTTATAATTGAAGTTTGGCATGAATGAAT-TAATGGGGAACATCTGTCT--ATGATGTT-CTACTAGAATTTAATTAAGGAGTGAAAATTCTTCATAA--ATAAATAAAGACGAGAAGACCCTAGAAATTTTATTTATCTAGTATA-----ATACTATATCATTTTGTTGGGGCGACAGAATAACAGAT--------------AAC---------------------------------------------------------------------------------------------------------------------- Iberus_gualterianus_AY546365_ES GGCTCCTAATTAAAGTCTGGTATGAATGAAT-ATATGGAAATAAGCTGTCT--CTAATATATTATTATTAAATTGG-TAGTAAGTGCAAATCCTTACGTA--AATATTAAAGACGAGAAGACCCTAGAAATTTAAATAATTA----------------------TTTTGTTGGGGCGACAATACTACAGTT--------------?T?TCA-----------------------CGACGCGA---TGTTGAAAGA----AGAAATTACTCTAGGGATAACAGCATAATTTAATA---CGTTTGTGACCTCGATGTTGGACTAGGTA Iberus_gualtierianus_gualtierianus_DQ822116_ES GGCTTTTAATTAGAGTCTGGTATGAATGAAT-ATATGGGTTACAGCTGTCT---TAGAATATTATTTTGAATTTGG-ATGTAAGTGAAAATCCTTACCTA--AATAAAAAAGACGAGAAGACCCTAGAAGCTTACATTAATA----------------------TTTTGTTGGGGCGACAGAATTACACTT--------------AACTAG---TTT-TA-------AAAAACGGGACGCGG---GGCTGATAGA----ACAAGCTACTCTAGGGATAACAGCATAATTTTTC----CGTTTGTGACCTCGATGTTGGACTAGGTA Iberus_marmoratus_EF440214_ES GGCTCCTAATTAGAGTCTGGTATGAATGAAT-ATATGGAAATAAGCTGTCT---TAATATATTATTATTAAATTGG-TAGTAAGTGCAAATCCTTACGTA--AATATTAAAGACGAGAAGACCCTAGAAATTTAAATAATTA----------------------TTTTGTTGGGGCGACAGAACTACAGTT--------------AACTAG---TTT-TA-------TGTAACATGACGTA----TACTGGAAGA----ATAAATTACTCTAGGGATAACAGCATAATGTAAC----CGTTTGTGACCTCGATGTTGGACTAGGTA Isognomostoma_isognomostoma_AY546366_DE GGCTTATAATTGAAGTCTAGCATGAACGAAT-ATACGGGCAGTAGCTGTCT--TAGGAGTAATATAGTGAATTTAATTATCAAGTGCAAATGCTTGCAGC--ATTAAAAAAGACGAGAAGACCCTAGAAACTT-------------------------------TTTTGTTGGGGCGACAGGATTGCAACT--------------AACAGT---CTTATT-----GCACTTACATATAACAT---GTAGTAAAAG----AGAAGTTACTCTAGGGATAACAGCATAATTTTAT----AGTTTGTGACCTCGATGTTGGACTAGGAA Isognomostoma_isognomostos_JF717820_IT GGCTTATAATTGAAGTCTAGAATGAACGAAC-TTACGGGCAGTAGCTGTCT--TAGGAATAGTATAGTGAATTTAATTATCAAGTGCAAATGCTTGCAGC--ATTAAAAAAGACGAGAAGACCCTAGAAACTTTCTA---------------------------TTTTGTTGGGGCGACAGGATTGCAACT--------------AACCAG---TCT-TA-------TTATACGGGACGTAT---AGCAGCAAGA----CGAAGTTACTCTAGGGATAACAGCATAATTTTATA-T-AGTTTGTGACCTCGATGTTGGACTAGGAA Isognomostoma_isognomostos_JF717821_IT GGCTTATAATTGAAGTCTAGAATGAACGAAC-TTACGGGCAGTAGCTGTCT--TAGGAATAGTATAGTGAATTTAATTATCAAGTGCAAATGCTTGCAGC--ATTAAAAAAGACGAGAAGACCCTAGAAACTTTCTA---------------------------TTTTGTTGGGGCGACAGGATTGCAACT--------------AACCAG---TCT-TA-------TTATACGGGACGTAT---AGCAGCAAGA----CGAAGTTACTCTAGGGATAACAGCATAATTTTATA-T-AGTTTGTGACCTCGATGTTGGACTAGGAA Marmorana_signata_JF717822_IT GGCTTATAATTGAAGTCTAGAATGAACGAAA-TAACGGGTAGTAGCTGTCT--CATAAATAATATTACAAATTTAGTAAGTAAGTGCAAAAACTTACAAC--ATTATATTAGACGAGAAGACCCTAGAAATTTTTATATAAGT---------------------TTTTGTTGGGGCGACAGAGTTATAGAA--------------AACTAA---CTT-TA-------TATAACATGTAGTAT---TAAAGAAAGA----TTAAATTACTCTAGGGATAACAGCATAATTTAAAAT--AGTTTGTGACCTCGATGTTGGACTAGGTA Oestophora_turriplana_AY546369_PT GTCTCATAATTGGAGTTTAGAATGAATGGAA-GCATGGGGTTAAACTGTCT--CTTTAAAT-ATGAATGAATTTACTACACAAGTGAAAATTCTTGTAAA--AACATAAAAGACGAGAAGACCCTAGAAATTTTAATAAACGT---------------------TTTTGTTGGGGCGGCAGAATAACAATA--------------ACCTTA---TTT-TA-------TAATATTAGAAGGTT---ATTAAAGAGACCTTATAAAGTACTCTAGGGATAACAGCATAA--------------------------------------- Otala_lactea_AY937264_ES GGCTTTTAATTAAAGTCTGGGATGAATGAAA-GCATGGGTAACGGCTGTCTTACTATTAAATTATATTGAAGTTAGTAAGTAAGTGAAAATACTTACAA---TTTAAAAAAGACGAGAAGACCCTAGAAACTTGTGTAATTA----------------------TTTTGTTGGGGCGACAGAATTACAAAA--------------AACTAA---TTC-TC-------CTATACGTGACGTT----GACAGATAGA----TCAAGTTACTCTAGGGATAACAGCATAATTTTTAC---AGTTTGTGACCTCGATGTTGGACTAGGTA Otala_punctata_AY546370_ES GGCTTTTAATTAAAGTCTAGAATGAATGAAA-ACATGGGTAGTGCCTGTCT-ACTATTATA-TTTATTGAATTTAATAAGTAGGTGCAAATGCCTACATA--GTTAAAAAAGACGAGAAGACCCTAGAAACTTGTATACTTA----------------------TTTTGTTGGGGCGACAGAATTACAAAG--------------AACTAA---TTT-TA-------TTTTTACAGGGCGAA---AGCAGATAGA----GTAAGTTACTCTAGGGATAACAGCATAATTTTAC----AGTTTGTGACCTCGATGTTGGACTAGGTA Otala_punctata_JF717823_ES GGCTTTTAATTAAAGTCTAGAATGAATGAAA-ACATGGGTAGTGACTGTCT-ACTATTATATTTTATTGAATTTAATAAGTAGGTGCAAATGCCTACATA--GTTAAAAAAGACGAGAAGACCCTAGAAACTTGTATACTTA----------------------TTTTGTTGGGGCGACAGAATTACAAAG--------------AACTAA---TTT-TA-------TTTTTACAGGGCGAA---AGCAGATAGA----GTAAGTTACTCTAGGGATAACAGCATAATTTTAC----AGTTTGTGACCTCGATGTTGGACTAGGTA Otala_punctata_JF717824_ES GGCTTTTAATTAAAGTCTAGAATGAATGAAA-ACATGGGTAGTGACTGTCT-ACTATTATATTTTATTGAATTTAATAAGTAGGTGCAAATGCCTACATA--GTTAAAAAAGACGAGAAGACCCTAGAAACTTGTATACTTA----------------------TTTTGTTGGGGCGACAGAATTACAAAG--------------AACTAA---TTT-TA-------TTTTTACAGGGCGAA---AGCAGATAGA----GTAAGTTACTCTAGGGATAACAGCATAATTTTAC----AGTTTGTGACCTCGATGTTGGACTAGGTA Otala_punctata_JF717825_ES GGCTTTTAATTAAAGTCTAGAATGAATGAAA-ACATGGGTAGTGACTGTCT-ACTATTATATTTTATTGAATTTAATAAGTAGGTGCAAATGCCTACATA--GTTAAAAAAGACGAGAAGACCCTAGAAACTTGTATACTTA----------------------TTTTGTTGGGGCGACAGAATTACAAAG--------------AACTAA---TTT-TA-------TTTTTACAGGGCGAA---AGCAGATAGA----GTAAGTTACTCTAGGGATAACAGCATAATTTTAC----AGTTTGTGACCTCGATGTTGGACTAGGTA Pseudotachea_splendida_AY546372_ES GGCTCTTAATTAGAGTCTGGTATGAACGAAT-GTATGGAAAGTGGCTGTCT--CTATGGTA-TACATCAAAATTGG-TAGTAAGTGCAAATCCTTACATA--CATTTAATAGACGAGAAGACCCTAAAAACTTAATGAAAT-----------------------TTTTGTTGGGGCGACAGAACTACAATAA-------------AACTAG---TTT-TA-------AAATACAAGACGTA----AACTGAAAGA----CAAAGCTACTCTAGGGATAACAGCATAATGTAAA----CGTTTGTGACCTCGATGTTGGACTAGGTA Pseudotachea_splendida_AY937266_ES GGCTCTTAATTAGGGTCTGGTATGAACGAAT-GTATGGAAAGTAGCTGTCT--CTATAATA-GATTTCAAAATTGG-TAGTAAGTGCAAATCCTTACAT-----TCTAATAGACGAGAAGACCCTAGAAGCTTAAAAAAAT-----------------------TTTTGTTGGGGCGACAGAACTACAATTA-------------AACTAG---TTT-TA-------TAATACAAGACGTA----TACTGTAAGA----TAAAGCTACTCTAGGGATAACAGCATAATGTAAA----CGTTTGTGACCTCGATGTTGGACTAGGTA Zonites_algirus_AY546381_FR GTCTTTTAATTGGAGACTGGAATGAAAGGAT-GTATGGATCATAGCTGTCT--CCTGCAAC-TTATACAAAATTACTTAAAGGGTGAAAATTCCCTTAAT--ATTACATTAGACGAGAAGACCCTTAAAATTATAACAAAAATACAACT----AACTATTGAGTGTTTGTTGGGGCAACAGAGTATCTAAA--------------AACATA---CTTATAAGCATATACTCACAACCAAATA---ATAGTAGCAA----TGAAATTACTCTAGGGATAACAGCATAATTTATTA-TAAGATTGGGACCTCGATGTTGGACTCAG?? Zonites_algirus_JF717826_GR GACCTTTAATTGGGGCCTAGAATGAATGAATAAAATGGGGGAAAACTGTCT--TAGCTATACTGATTAAAAATTTCTTTGAAGGTGAAAATTCCTTTAAA--ACTTTAATAGACGAGAAGACCCTAGGAGTTTAAAAATATTGTTTAAATAAAAATAAATTTTTTTTTGTTGGGGCGACAATTTAACAGAA--------------AACTTAAA---T-AAAAAAATTGACATAACGAAATTT---TTAATTAAGA----ATAAACTACCCTAGGGATAACAGCATAATTTTTTA-AAAGTTTGTGACCTCGATGTTGGATTAGGAA Zonites_casius_EF568987_GR GACTTTTAAATGAGGCCTAGAATGAATGAAT-TTATGGATAAATACTGTC?--TAAGTAAATTGTTTAAAAGTTTCTTAATAGGTGAAAATTCCTTTAAA--AATTTAATAGACGAGAAGACCCTGGGAGTTTAA---------------------TTAGTATATTTTGTTGGGGCGAC?ATTTAACAAAT--------------AACTTAAATTTT-TAA--GTGTTTTAAACGAA?ATTT---TTAATTA?GG----GTAAACTACCCCAGGGATAACAGCATAATTTTTTG-AAAGTTTGTGACCTCGATGTT?????????? Zonites_pergranulatus_cycladicus_EF568963_GR GACCTTTAATTGAGGCCTGGAATGAATGAATAAAATGGGGGGAACCTGTCT--TTTTTACATTAATTAAAAATTACTTAGGAGGTGAAAATTCCTTTAAA--AATTTAATAGACGAGAAGACCCTAGGAGTTTAAAATAAAGGAAAAG----------------TTTTGTTGGGGCGACAATTTAACAAAA--------------AACTTAAAGTTT-AAATGGATTTTTATAACGATTTTT---CTAATTTAAA----ATAAACTACCCTAGGGATAACAGCATAATTTTTT--TAAGTTTGTGACCTCGATGTT?????????? ; END; BEGIN TREES; Title 'Trees from "16S-43-NJ-Fig2.tre"'; LINK Taxa = Taxa; TRANSLATE 1 Albinaria_caerulea_AY546342_GR, 2 Arianta_arbustorum_AY546343_CH, 3 Arianta_arbustorum_JF717809_FR, 4 Arianta_arbustorum_JF717810_NL, 5 Caracollina_lenticula_AY546345_ES, 6 Caracollina_lenticula_JF717811_IT, 7 Cepaea_nemoralis_AY546350_DE, 8 Chilostoma_cingulatum_AY546354_IT, 9 Chilostoma_cingulatum_JF717812_AT, 10 Chilostoma_cingulatum_JF717813_IT, 11 Cochlicella_acuta_AY546355_FR, 12 Cochlicella_acuta_AY741442_IT, 13 Cochlicella_acuta_AY741443_IT, 14 Eobania_vermiculata_AY546357_FR, 15 Eobania_vermiculata_AY741409_IT, 16 Helicigona_lapicida_andorrica_JF717814_ES, 17 Helicigona_lapicida_andorrica_JF717815_ES, 18 Helicigona_lapicida_andorrica_JF717816_ES, 19 Helicigona_lapicida_AY546360_DE, 20 Helicigona_lapicida_lapicida_JF717817_BE, 21 Helicigona_lapicida_lapicida_JF717818_DE, 22 Helicodonta_obvoluta_AY546361_CH, 23 Helicodonta_obvoluta_JF717819_NL, 24 Helicopsis_striata_AY546362_DE, 25 Iberus_gualterianus_AY546365_ES, 26 Iberus_gualtierianus_gualtierianus_DQ822116_ES, 27 Iberus_marmoratus_EF440214_ES, 28 Isognomostoma_isognomostoma_AY546366_DE, 29 Isognomostoma_isognomostos_JF717820_IT, 30 Isognomostoma_isognomostos_JF717821_IT, 31 Marmorana_signata_JF717822_IT, 32 Oestophora_turriplana_AY546369_PT, 33 Otala_lactea_AY937264_ES, 34 Otala_punctata_AY546370_ES, 35 Otala_punctata_JF717823_ES, 36 Otala_punctata_JF717824_ES, 37 Otala_punctata_JF717825_ES, 38 Pseudotachea_splendida_AY546372_ES, 39 Pseudotachea_splendida_AY937266_ES, 40 Zonites_algirus_AY546381_FR, 41 Zonites_algirus_JF717826_GR, 42 Zonites_casius_EF568987_GR, 43 Zonites_pergranulatus_cycladicus_EF568963_GR; TREE nj = (((((((((((((4:0.01096,3:0.00784):0.01347,2:0.02634):0.05433,((29:0.0,30:0.0):0.05207,28:0.0656):0.03806):0.00288,(10:0.0,9:0.0):0.0879):0.0068,((((16:0.00141,17:-0.00141):0.00158,18:3.2E-4):0.00493,5:0.01515):0.03717,((20:0.00555,21:0.00585):0.0062,11:0.03583):0.03626):0.0717):0.00902,(((((((35:0.0,36:0.0):0.0,37:0.0):0.00136,34:0.00243):0.07313,33:0.07008):0.02423,(((25:0.03458,27:0.02602):0.04372,(38:0.03771,39:0.02854):0.04537):0.01133,26:0.08301):0.02351):0.0062,(14:0.04305,15:0.02374):0.07165):0.00723,7:0.13038):0.00817):0.00104,(31:0.024,8:0.02665):0.07867):0.01585,(13:0.0067,12:0.00724):0.14151):0.0077,(19:0.09747,(24:0.13419,32:0.14117):0.01538):0.00306):0.00565,6:0.1277):0.00761,(22:0.00234,23:0.00142):0.11419):0.00892,(40:0.16471,1:0.15545):0.01573):0.07555,((43:0.05953,41:0.07089):0.00415,42:0.07756):0.00415); END; BEGIN CODONS; CODONPOSSET * UNTITLED = N: 1- 326 ; CODESET * UNTITLED = universal: 1 - 326; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS; TYPESET * UNTITLED = unord: 1 - 326; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 326; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1317563371065; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 8776256865898898837; tell It; setDefaultOrder 18 0 1 2 34 13 19 20 4 3 21 23 22 24 25 10 11 12 26 8 9 27 32 28 29 30 31 7 5 6 17 33 35 36 14 15 16 37 38 39 40 41 42; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 8040015359527211561; mqVersion 275; checksumv 0 3 3653500071 null getNumChars 326 numChars 326 getNumTaxa 43 numTaxa 43 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 270540.0 sumSquares 4.6116860184275476E18 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 65; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 749 616; setLocation 128 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #8776256865898898837 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #8776256865898898837; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 684 549; setLocation 128 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.sort; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #8776256865898898837 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 882.1317563268287.5653506872126104908; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 684 549; setLocation 128 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle on; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 1; orientLeft; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #8040015359527211561 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 684 549; setLocation 128 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; getWindow; tell It; forceAutosize; endTell; hideWindow; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;