NEXUS
[File created by TreeBASE:  7/26/07  21:05:19]
[Matrix accession#: M1919]

BEGIN TAXA;
	TITLE M1919;
	DIMENSIONS  NTAX=28;
	TAXLABELS
		Sydowia_polyspora	Scleroconidioma_sphagnicola	Sarcinomyces_crustaceus	Rhizosphaera_pini	Rhizosphaera_oudemansii	Rhizosphaera_macrospora	Rhizosphaera_kalkhoffii	Phaeosclera_dematioides	Phaeocryptopus_gaeumanii	Kabatina_thujae	Kabatina_juniperi_AF260224	Kabatina_juniperi_AF182376	Kabatiella_lini	Hormonema_sp_ATCC74360	Hormonema_prunorum	Hormonema_macrosporum	Hormonema_dematioides_AJ278927	Hormonema_dematioides_AF013228	Endoconidioma_populi_UAMH_10298	Endoconidioma_populi_UAMH_10297	Dothiora_rhamni_alpinae	Dothiora_europaea	Dothiora_cannabinae	Dothidea_insculpta	Dothidea_hippophaes	Aureobasidium_pullulans_AJ276062	Aureobasidium_pullulans_AF121287	Aureobasidium_pullulans_AF013229
	;
END;

BEGIN CHARACTERS;
	TITLE M1919;
	DIMENSIONS NCHAR=567;
	FORMAT DATATYPE = DNA MISSING = ? GAP = -  ;
	MATRIX
		Sydowia_polyspora                      CATT-AAAGAG-ATAGGGT-CTTC---------A-T---GGCCCG-ACCTCCAACCCTCTGTTGTTAAAACTA----CCTTGTTGCTTTGGCGGGACCGTCTCGG-TCT--CCGAGCGCACTAACC-CTCGGGT-TGGTGAGCGCCCGCCAGAGTCCAACCAAACTCTTG-TATT-AAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCATCGCTTGGTATTGGGAA-CGGTCCGTCG-CAAGGCGGGCCTTCC-TCGAAG-ACCTCGGCGGGGTTCAAC-CAACTTCGGGCGTAGTA-GAGTTAAATCGAA--CGTCTTATAA-GCTTGGT-CGGATCTCATTG-CCG-----------TCAAACCTTTAAATTTT-CTAGGTTGACC
		Scleroconidioma_sphagnicola            CATT-AAAGAG-TAAGGGT-CTCT---------------GGCCCGAACCTCCAACCCTCTGTTGTTAAAACTA----CCTTGTTGCTTTGGCGGGACCGTTC-GG-TCT---CGAGCGCGCCGGTC-TTCGGAT-TGGCGAGCGCCCGCCAGAGTCCAACCAAACTCTTG-TATT-AAACCAGTCGTCTGAGTATAAAATTTTAATTTAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGACGGGCGTGCC-TCGAAG-ACCTCGGCGGGGCCTAAC-CGGCTTCGGGCGTAGTA-GAGTTAAATCGAA--CGTCTTATGA-GTCTGGT-TAGAACCCATTG-CCG-----------TAAAACC-TTTTATTTT-CTAGGTTGACC
		Sarcinomyces_crustaceus                CATTAAAAGAG-ATAGGGT-CTC----------A--C--GGCCCG-ACCTTCAACCCTTTGTTGTTTAAA--AAAA-CC-TGTTGCTTTGGCGGGACCGTTC-G--TCCTCGTGACGGACTGTCGGTCTTCGGCCCGGCAAGCGCCCGTCAGAGTCCAACCAAACTCTTGATAT---AACCAGTCGTCTGAGAATAAAGATT-TAATCAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCCTGGTATTCCGGGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCTATGCTTGGTATTAGGCCCTCGCCCCT-GTCAAAGGGGGCGTGCC-TCAAAC-ACCTCGGCGAAGTCTCAT-CGGCTTTGGGCGCAGTA-GAATTTACTCAAAA-CGCTCGTGGA-GTCTGGT-GGAA--CTTTTG-CCGCAAAACCGCGTCGAAAGACACA--TTTTTAAAGGTTGACC
		Rhizosphaera_pini                      CATT-AAAGAG-TAAGGGT-CTCC---------------GGCCCG-ACCTCCAACCCTTTGTTGTTAAAACTA----CCTTGTTGCTTTGGCGGGACCGTTC-GG-TCT---CGAG-GCACCGGTTCTTCGGAT-TGGTGAGCGCCCGCCAGAGTCCAACCAAACTCTTG-TATT-AAACCAGTCGTCTGAGTATAAAATTTTAATTTAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACCCGTCCGCCG-AAAGGCGGGCGTGCC-TCGAAG-ACCTCGGCGGGGCCTGAC-CGGCTTCGGACGTAGTA-GAGTTAAATCAAAA-CGTCTCATGA-GTCCGGT-TGGAACCCATTG-CCG-----------TAAAACCTTTTTATTT--CTAGGTTGACC
		Rhizosphaera_oudemansii                CATT-AAAGAG-TAAGGGT-CTCT---------------GGCCCGAACCTCCAACCCTTTGTTGTTAAAACTA----CCTTGTTGCTTTGGCGGGACCGTTC-GG-TCT---CGAGCGCACCGGTC-TTCGGAT-TGGTGAGCGCCCGCCAGAGTCCAACCAAACTCTTG-TATT-AAACCAGTCGTCTGAGTATAAAATTTTAATTTAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACCCGTCCGCCG-AAAGGCGGGCGTGCC-TCGAAG-ACCTCGGCGGGGCCTAACACGGCTTCGGGCGTAGTAAAAGTTAAATCAAAA-CGTCTTATAA-GTCTGGT-TGGAACCCATTG-CCG-----------TAAAACCTTTTTTTTTT---AGGTTG-CC
		Rhizosphaera_macrospora                CATT-AAAGAG-TAAGGGT-CTCC---------------GGCCCGAACCTCCAACCCTTTGTTGTTAAAACTA----CCTTGTTGCTTTGGCGGGACCGTTC-GG-TCT---CGAGCGCACCGGTC-TTCGGAT-TGGTGAGCGCCCGCCAGAGTCCAACCAAACTCTTG-TATT-AAACCAGTCGTCTGAGTATAAAATTTTAATTTAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACCCGTCCGCCG-AAAGGCGGGCGTGCC-TCGAAG-ACCTCGGCGGGGCCTAAC-CGGCTTCGGGCGTAGTA-GAGTTAAATCAAAA-CGTCTTATAAAGTCTGGT-TAGAACCCATTG-CCG-----------TAAAACCTTTTATTTTTTCTAGGTTGACC
		Rhizosphaera_kalkhoffii                CATT-AAAGAG-TAAGGGTCCTCC---------------GGCCCG-ACCTCCAACCCTTTGTTGTTAAAACTA----CCTTGTTGCTTTGGCGGGACCGTTC-GG-TCT---CGAG-GCACCGGTC-TTCGGAT-CGGTGAGCGCCCGCCAGAGTCCAACCAAACTCTTG-TATT-AAACCAGTCGTCTGAGTATAAAATTTTAATTTAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACCCGTCCGCCG-AAAGGCGGGCGTGCC-TCGAAG-ACCTCGGCGGGGCCTAAC-CGGCTTCGGGCGTAGTA-GAGTTAAATCAAAAACGTCTTATAA-GTCTGGT-TAGAACCCATTG-CCG-----------TAAAACCTTTTTATTTT-CTAGGTTGACC
		Phaeosclera_dematioides                CATT-AATGAG-TGAGGGT-CCTC---------A--C-CGGCCCG-ACCTCCAACCCTTTGTCGTTTAAACAAAAACCCTTGTTGCTTTGGCGGTGCCGTCC-G--CCG--GCCGGCCCTCTGTGG-CCCTA---GGCCGGGCGCCCGCCGGGGTGAAACCAAACTCTTGCGATGC-AACCATACGTCCGAGT-AACCGAT--AAATCAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGGGGG-GCATGCCTG-TTCGAGCGTCATTACACCAATCAAGCTCTGCTTGGAGTTAGGTCTTCGTCCCCCGTCAGGGCGGGCGTGCC-TCAAAA-CATTCGGCGAAGTCACAC-CGGCTTTGGGCGTAGTA-GAATCT--TCAAAA-CGTCTAATGT-GGCCGG--GCGGGTCTTCTG-CCG-----------TCAAACCGCAAACATTTACCAGGTTGACC
		Phaeocryptopus_gaeumanii               CATT-AAAGAG-TAAGGGT---T--ATTC-----GT---AGCCCG-ACCTCCAAMCCTTTGTTGTTATAACTA----CCTCGTTGCTTTGGCGGGACCGCTC-GG-TCT---CGAGC-TGCTGGTC-TTCGGCC-CGGCAAGTGCCCGCCAGAGTCTACTCAAACTCTTGTT-TT--AACCGGTCGTCTGAGT-TAAACTTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAAATCTTTGAAACGCACATTGCGCTCCCTGGTATTCCGGGGGAGCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTAGGCCATCGTCCCCCG-AAAGGTGGGCGTGCC-TCAAAC-ACCTCGGCGGAACCTCAC-CGGCTTTGGGCGTAATA-AAATTTC-TCAA---CGTCTTATAAGTACCGGTTCTGACTCCTTTG-CCG-----------TTAAACCCCAAACTTTT-AAAGGTTGACC
		Kabatina_thujae                        CATT-AAAGAG-ATAGGGT-CCT----------AGT---GGCCCA-ACCTCCAACCCTCTGTTGTTATAACTA----CCTTGTTGCTTTGGCGGGACCGTTC-GG-TCT--CCGAGCGCACCAGTC-TTCGGAC-AGGTGAGCGCCCGCCGGAGTCCAACCAAACTCTTGTTTTT-AAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACTCGTCCGCCG-CAAGGCGGGCGTGCC-TCGAAG-ACCTCGGCGGGGTTTCAT-CAACTTCGGGCGTAGTA-GAGTTAAATCGAA--CGTCTTATAA-GCTTGGT-GAGATCTCATTG-CCG-----------TTAAACCCTTTTATTTTTC-AGGTTGACC
		Kabatina_juniperi_AF260224             CATT-AAAGAG-TTAGGGT-CCC----------AGT---GGCCCA-ACCTCCAACCCTCTGTTGTTATAACTA----CTTCGTTGCTTTGGCGGGACCGTTC-GG-TCCT-CCGAGCGCACCAGTC-TTCGGAC-AGGTGAGCGCCCGCCGGAGTCCAACCAAACTCTTGTTTTT--AACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACTCGTCCGCCG-TAAGGCGGGCGTGCC-TCGAAG-ACCTCGGCGGGGTTCCAT-CAACTTCGGGCGTAGTA-GAGTTAAATCGAA--CGTCTTATAA-GCTTGGT-GAGATCTCATTG-CCG-----------TTAAACCTTTCTATTTTTC-AGGTTGACC
		Kabatina_juniperi_AF182376             CATT-AAAGAG-TTAGGGT-CCT----------AGT---GGCCCA-ACCTCCAACCCTCTGTTGTTATAACCA----CTTCGTTGCTTTGGCGGGACCGTTC-GG-TCCT-CCGAGCGCACCAGTC-TTCGGAC-AGGTGAGCGCCCGCCGGAGTCCAACCAAACTCTTGTTTTT--AACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCACTCGTCCGCCG-TAAGGCGGGCGTGCC-TCGAAG-ACCTCGGCGGGGTTTCAT-CAACTTCGGGCGTAGTA-GAGTTAAATCGAA--CGTCTTATAA-GCTTGGT-GAGATCTCATTG-CCG-----------TTAAACCTTTTTATTTTTC-AGGTTGAC?
		Kabatiella_lini                        CATT-AAAGAG-TAAGGGTGCTC----------AGC----GCCCG-ACCTCCAACCCTTTGTTGTTAAAACTA----CCTTGTTGCTTTGGCGGGACCGCTC-GG-TCT---CGAGCCGCTGGGGA-TTCGTCCCAGGCGAGCGCCCGCCAGAGTTAAACCAAACTCTTGTTATTT-AACCGGTCGTCTGAGT-TAAAATTTTGAATATATCAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCTATGCTTGGTATTGGGCG-TCGTCC-TT---AA-TCGGGCGCGCC-TTAAAG-ACCTCGGCGAGGCCACTC-CGGCTTTAGGCGTAGTA-GAATTTATTCGAA--CGTCTGTCAA-A---GGA-GAGGAACT-CTG-CCGAC---------TGAAACCTTTATATTTTTCTAGGTTGACC
		Hormonema_sp_ATCC74360                 CATT-AAAGAG-TTAGGGT-CCT----------AGT---GGCCCA-ACCTCCAACCCTCTGTTGTTAAAACTA----CCTTGTTGCTTTGGCGGGACCGTTC-GG-TCT--CCGAGCGCGTTAACC-TTCGGGT-TGGCGAGCGCCCGCCAGAGTCCAACCAAACTCTTG-TATT-AAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGGCGGGCGTGCC-TCGAAGAACCTCGGCGGGGTTTTTC-CAACTTCGGGCGTAGTA-AAGTTAAATCAAAA-CGTCTTATAA-GCTTGGT-GAGATCTCATTG-CCG-----------TTAAACC-TTTTATTTTTC-AGGTTGACC
		Hormonema_prunorum                     CATT-AAAGAG-TAAGGGT-CTCT---------------GGCCCGAACCTCCAACCCTCTGTTGTTATAACTA----CTTCGTTGCTTTGGCGGGACCGCAAAGGTTCTC-CCGAGCGCGCCGGTC-TTCGGAC-AGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGTT-TT-AAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGCCGTAAAGGCGGGCGTGCC-TCGAAG-ACCTCGGCGGGGTTTCTC-CAACTTCGGGCGTAGTA-GAGTTAAATCAAAA-CGTCTTATAA-GCTTGGT-GAGATCTCATTG-CCG-----------TTAAACCTTTTTATATTTC-AGGTTGACC
		Hormonema_macrosporum                  CATT-AAAGAG-ATAGGGT-CTTC---------A-C---GGCCCG-ACCTCCAACCCTCTGTTGTTAAAACTA----CCTTGTTGCTTTGGCGGGACCGTCTCGG-TCT--CCGAGCGCACTAACC-CTCGGGT-TGGTGAGCGCCCGCCAGAGTCCAACCAAACTCTTG-TATT-AAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCATCGCTTGGTATTGGGAA-CGGTCCGTCG-AAAGGCGGGCCTTCC-TCGAAG-ACCTCGGCGGGGTTCAAC-CAACTTCGGGCGTAGTA-GAGTTAAATCGAA--CGTCTTACAA-GCTTGGT-CGGATCTCATTG-CCG-----------TTAAACCTTTAAATTTT-CTAGGTTGACC
		Hormonema_dematioides_AJ278927         CATT-AAAGAG-ATAGGGT-CTTC---------A-T---GGCCCG-ACCTCCAACCCTCTGTTGTTAAAACTA----CCTTGTTGCTTTGGCGGGACCGTCTCGG-TCT--CCGAGCGCACTAACC-CTCGGGT-TGGTGAGCGCCCGCCAGAGTCCAACCAAACTCTTG-TATT-AAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCATCGCTTGGTATTGGGAA-CGGTCCGTCG-CAAGGCGGGCCTTCC-TCGAAG-ACCTCGGCGGGGTTCAAC-CAACTTCGGGCGTAGTA-GAGTTAAATCGAA--CGTCTTATAA-GCTTGGT-CGGATCTCATTG-CCG-----------TTAAACCTTTAAATTTT-CTAGGTTGACC
		Hormonema_dematioides_AF013228         CATT-AAAGAG-ATAGGGT-CTTC---------A-T---GGCCCG-ACCTCCAACCCTCTGTTGTTCAAACTA----CCTTGTTGCTTTGGCGGGACCGTTTCGG-TCT--CCGAGCGCACTAACC-CTCGGGT-AGGTGAGCGCCCGCCAGAGTCCAACCAAACTCTTG-TATT-AAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCATCGCTTGGTATTGGGAA-CGGTCCGTCG-AAAGGCGGGCCTTCC-TCGAAG-ACCTCGGCGGGCTTCAAC-CAACTTCGGGCGTAGTA-GAGTTAAATCGAA--CGTCTTATAA-GCTTGGT-CGGATCTCATTG-CCG-----------TTAAACCTTTAAATTTT-CTAGGTTGACC
		Endoconidioma_populi_UAMH_10298        CATT-AAAGAG-TTAGGGT-CCC----------AGT---GGCCCA-ACCTCCAACCCTCTGTTGTTAAAACTA----CCTTGTTGCTTTGGCGGGACCGTTC-GG-TCT--CCGAGCGCGTTAACC-TTCGGGT-TGGCGAGCGCCCGCCAGAGTCCAACCAAACTCTTG-TATT-AAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGGCGGGCGTGCC-TCGAAG-ACCTCGGCGGGGTTTCTC-CAACTTCGGGCGTAGTA-GAGTTAAATCAAAA-CGTCTTATAA-GCTTGGT-GAGATCTCATTG-CCG-----------TTAAACCTTTTTATTTTAC-AGGTTGACC
		Endoconidioma_populi_UAMH_10297        CATT-AAAGAG-TTAGGGT-CCC----------AGT---GGCCCA-ACCTCCAACCCTCTGTTGTTAAAACTA----CCTTGTTGCTTTGGCGGGACCGTTC-GG-TCT--CCGAGCGCGTTAACC-TTCGGGT-TGGCGAGCGCCCGCCAGAGTCCAACCAAACTCTTG-TATT-AAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGGCGGGCGTGCC-TCGAAG-ACCTCGGCGGGGTTTCTC-CAACTTCGGGCGTAGTA-GAGTTAAATCAAAA-CGTCTTATAA-GCTTGGT-GAGATCTCATTG-CCG-----------TTAAACCTTTTTATTTTAC-AGGTTGACC
		Dothiora_rhamni_alpinae                CATT-AAAGAG-TAAGGGT-CTCT---------------GGCCCGAACCTCCAACCCTCTGTTGTTATAACTA----CCTCGTTGCTTTGGCGGGACCGC-AAGGTTCCC-CCGAGCGCGCCGGTC-TCCGGAC-AGGCGAGCGCCCGCCAGAGTCTAACCAAACTCTTGTTTTT-AAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACCGCTTGGTATTGGGCA-CCGTCCGCCGTAAAGGCGGGCGTGCC-TCGAAG-ACCTCGGCGGGGTTTCTC-CAACTTCGGGCGTAGTA-GAGTTAAATCAAAA-CGTCTTATAA-GCTTGGT-GAGATCTCATTGCCCG-----------TTAAACCTCAATTTTTTTC-AGGTTGACC
		Dothiora_europaea                      CATT-AAAGAGTTAAGGGT-CTCC---------------GGCCCGAACCTCCAACCCTCTGTCGTTATAACTA----CTTCGTTGCTTTGGCGGGACCGCGAAGGTTCTC-CCGAGCGCGCCGGTC-TTCGGAC-GGGCGAGCGCCCGCCAGAGTCCAACCAAACTCTTGTT-TT-AAACCAGTCGTCTGAGTATAAAATTTTAATATAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGCCG-AAAGGCGGGCGTGCC-TCGAAG-ACCTCGGCGGGGTTYCTC-CAACTTCGGGCGTAGTA-GAGTTAAATCAAAAA-GTCTTATAA-GCTTGGT-GGGACCTCATTG-CCG-----------TTAAACCCTCCCG????????????????
		Dothiora_cannabinae                    CATT-AAAGAG-TAAGGGT-CTCT---------------GGCCCGAACCTCCAACCCTCTGTCGTTATAACTA----CTTCGTTGCTTTGGCGGGACCGCGAAGGTTCTC-CCGAGCGCGCCAGTC-TTCGGAC-AGGCGAGCGCCCGCCAGAGTCCAACCAAACTCTTGTT-TT-AAACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACCGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGACGGGCGTGCC-TCGAAG-ACCTCGGCGGGGTTTCTC-CAACTTCGGGCGTAGTA-GAGTTAAATCAAAA-CGTCTTATAA-GCTTGGT-GGGACCTCATTG-CCG-----------TTAAACC-TTTTATTTTTC-A????????
		Dothidea_insculpta                     CATTAAAAGAA-TTGGAGTG-----AC-T-AACCGTCCT---CCG-ACTTCCAACCCTCTGTTGTTATAACTA----CCTTGTTGCTTTGGCGGGACCGTTC-GG-TCCT-CCGAGCGCACCAGTC-TTCGGAC-AGGTGAGTGCCCGCCAGAGTCCAACCAAACTCTTGTTTTT--AACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGGCGGGCGTGCC-TCGAAG-ACCTCGGCGGGGTTTCTC-CAACTTCGGGCGTAGTA-GAGTTAAATCGAA--CGTCTTATAA-GCTTGGT-GGGACTCCATTG-CCG-----------TTAAACCTTTTA-TTTT-CTAGGTTGACC
		Dothidea_hippophaes                    CATTAAAAGA--TT-GAGTGTCGCGACCTAAAAAATCGCGA-CC--ACTTCCAACCCTCTGTTGTTATAACTA----CCTTGTTGCTTTGGCGGGACCGTTC-GG-TCCT-CCGAGCGCACCAGTC-CTCGGAC-AGGTGAGCGCCCGCCAGAGTCCAACCAAACTCTTGTTTTT--AACCAGTCGTCTGAGTATAAAATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCACTGCTTGGTATTGGGCA-TCGTCCGTCG-AAAGGCGGGCGTGCC-TCGAAG-ACCTCGGCGGGGTTTCTC-CAACTTCGGGCGTAGTA-GAGTTAAATCGAA--CGTCTTATAA-GCTTGGT-GGGACTCCATTG-CCG-----------TTAAACCTTTTATTTTT-ATAGGTTGACC
		Aureobasidium_pullulans_AJ276062       ???????????-TAAGGGTGCTC----------AGC----GCCCG-ACCTCCAACCCTTTGTTGTTAAAACTA----CCTTGTTGCTTTGGCGGGACCGCTC-GG-TCT---CGAGCCGCTGGGGA-TTCGTCCCAGGCGAGCGCCCGCCAGAGTTAAACCAAACTCTTGTTATTT-AACCGGTCGTCTGAGT-TAAAATTTTGAATAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCTATGCTTGGTATTGGGTG-CCGTCC-TT---AG-TTGGGCGCGCC-TTAAAG-ACCTCGGCGAGGCCTCAC-CGGCTTTAGGCGTAGTA-GAATTTATTCGAA--CGTCTGTCAA-A---GGA-GAGGACTT-CTG-CCGAC---------TGAAACCTTT--ATTTTTCTAGGTTGACC
		Aureobasidium_pullulans_AF121287       CATT-AAAGAG-TAAGGGTGCTC----------AGC----GCCCG-ACCTCCAACCCTTTGTTGTTAAAACTA----CCTTGTTGCTTTGGCGGGACCGCTC-GG-TTC---CGAGCCGCTGGGGA-TTCGTCCCAGGCGAGCGCCCGCCAGAGTTAAACCAAACTCTTGTTATTTAAACCGGTCGTCTGAGT-TAAAATTTTGAATAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTG-TTCGAGCGTCATTACACCACTCAAGCTATGCTTGGTATTGGGTG-CCGTCC-TT---AG-TTGGGCGCGCC-TTAAAG-ACCTCGGCGAGGCCACTC-CGGCTTTAGGCGTAGTA-GAATTTATTCGAA--CGTCTGTCAA-A---GGA-GAGGAACT-CTG-CCGAT---------TGAAACCTTT-TATTTTTCTAGG??????
		Aureobasidium_pullulans_AF013229       CATT-AAAGAG-TAAGGGTGCTC----------AGC----GCCCG-ACCTCCAACCCTTTGTTGTTAAAACTA----CCTTGTTGCTTTGGCGGGACCGCTC-GG-TCT---CGAGCCGCTGGGGA-TTCGTCCCAGGCGAGCGCCCGCCAGAGTTAAACCAAACTCTTGTTATTT-AACCGGTCGTCTGAGT-TAAAATTTTGAATAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG-AATCTTTG-AACGCACATTGCGCCCCTTGGTATTCCGAGGG-GCATGCCTGTTTCGAGCGTCATTACACCACTCAAGCTATGCTTGGTATTGGGCG-TCGTCC-TT---AGTTTGGGCGCGCCCTTAAAG-ACCTCGGCGAGGCCACTC-CGGCTTTAGGCGTAGTA-GAATTTATTCGAA--CGTCTGTCAA-A---GGA-GAGGAACT-CCG-CCGAC---------TGAAACCTTTAT-TTTTTCTAGGTTGACC
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 567 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;