#NEXUS [written Fri Jan 13 22:26:54 CST 2012 by Mesquite version 2.5 (build j77) at WangY-PC/192.168.53.236] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=82; TAXLABELS Neotyphodium_guerinii_CBS112036_2 Neotyphodium_guerinii_MYA1235_2 Neotyphodium_gansuense_E7080 Neotyphodium_gansuense_E7082 Neotyphodium_gansuense_var._inebrians_817 Neotyphodium_gansuense_var._inebrians_818 Fnj7409_2 Fnj7405_2 Fnj7402_2 Neotyphodium_australiense_937_2 Neotyphodium_melicicola_827_1 Neotyphodium_lolii_135 Neotyphodium_siegelii_e915_2 Epichloe_festucae_ATCC201550 Epichloe_festucae_ATCC90661 Neotyphodium_tembladerae_4055_1 Neotyphodium_australiense_937_1 Neotyphodium_coenophialum_e19_2 Neotyphodium_tembladerae_1169_1 Epichloe_sp._9924 Neotyphodium_occultans_992_1 Neotyphodium_coenophialum_e19_3 Epichloe_baconii_ATCC76552 Epichloe_baconii_ATCC200745 Epichloe_amarillans_906 Epichloe_amarillans_ATCC200743 Neotyphodium_chisosum_134_2 Neotyphodium_stromatolongum_Cnj6611 Neotyphodium_stromatolongum_Cnj6617 Epichloe_brachyelytri_ATCC200752 Epichloe_brachyelytri_ATCC201561 Epichloe_bromicola_9633 Epichloe_bromicola_9630 Neotyphodium_sinofestucae_Fnj6606_1 Fnj7409_1 Fnj7402_1 Fnj7405_1 Neotyphodium_siegelii_e915_1 Epichloe_yangzii_Rnj4201 Epichloe_yangzii_Rnj3302 Epichloe_yangzii_Rnj4301 Neotyphodium_sinofestucae_Fnj4602_1 Neotyphodium_occultans_992_2 Epichloe_liyangensis_Ply9101_1 Epichloe_liyangensis_Ply9102_1 Neotyphodium_sinicum_Rts2102_1 Neotyphodium_sinicum_Rxy6106_1 Neotyphodium_chisosum_134_1 Epichloe_elymi_ATCC200850 Epichloe_elymi_ATCC201554 Neotyphodium_melicicola_827_2 Neotyphodium_aotearoae_829 Epichloe_glyceriae_ATCC200747 Epichloe_glyceriae_ATCC200755 Neotyphodium_chisosum_134_3 Neotyphodium_uncinatum_e167 Neotyphodium_coenophialum_e19_1 Neotyphodium_typhinum_var._canariense_98 Epichloe_typhina_ATCC201667 Epichloe_typhina_ATCC201669 Neotyphodium_huerfanum_ATCC64040 Neotyphodium_tembladerae_1169_2 Neotyphodium_tembladerae_4055_2 Epichloe_liyangensis_Ply9101_2 Epichloe_liyangensis_Ply9102_2 Neotyphodium_sinofestucae_Fnj6606_2 Neotyphodium_sinofestucae_Fnj4602_2 Neotyphodium_sinicum_Rxy6106_2 Neotyphodium_sinicumRts2102_2 Epichloe_sylvatica_ATCC200748 Epichloe_sylvatica_ATCC200751 Epichloe_typhina_ATCC200739 Epichloe_clarkii_ATCC200741 Epichloe_typhina_E432 Epichloe_clarkii_ATCC200742 Epichloe_typhina_ATCC200851 Epichloe_typhina_ATCC201666 Epichloe_typhina_ATCC201740 Epichloe_typhina_ATCC200738 Neotyphodium_guerinii_CBS112036_1 Neotyphodium_guerinii_MYA1235_1 Claviceps_purpurea_ATCC20102 ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=411; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = ?; MATRIX Neotyphodium_guerinii_CBS112036_2 GCGGTATT--CGAGAACTGT-AGCTGATCTTTTT---------TCTTTCC Neotyphodium_guerinii_MYA1235_2 GCGGTATT--CGAGAACTGT-AGCTGATCTTTTT---------TCTTTCC Neotyphodium_gansuense_E7080 GCGGTATT--CGAGAACTGT-AGCTGATCTTTTT---------TCTTTCC Neotyphodium_gansuense_E7082 GCGGTATT--CGAGAACTGT-AGCTGATCTTTTT---------TCTTTCC Neotyphodium_gansuense_var._inebrians_817 GCGGTATTT-CGAGAACTGT-AGCTGATCCATTT---------TCTTTCC Neotyphodium_gansuense_var._inebrians_818 GCGGTATTT-CGAGAACTGT-AGCTGATCCATTT---------TCTTTCC Fnj7409_2 GCGGTATT--CGAGAACTGT-AGCTGACCT-TTT---------TCTTTCC Fnj7405_2 GCGGTATT--CGAGAACTGT-AGCTGACCT-TTT---------TCTTTCC Fnj7402_2 GCGGTATT--CGAGAACTGT-AACTGACCT-TTT---------TCTTTCC Neotyphodium_australiense_937_2 GCGGTATT--CGAGAACTGT-AGCTGACCT-TTT---------TCTTTCC Neotyphodium_melicicola_827_1 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCC Neotyphodium_lolii_135 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCC Neotyphodium_siegelii_e915_2 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCC Epichloe_festucae_ATCC201550 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCC Epichloe_festucae_ATCC90661 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCC Neotyphodium_tembladerae_4055_1 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCC Neotyphodium_australiense_937_1 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTCCCCTCTTTTCCC Neotyphodium_coenophialum_e19_2 GCGGTATT--CGAGAACTGT-AGCTGACCTGTT-CTTCCCCTCTTTTCCC Neotyphodium_tembladerae_1169_1 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCC Epichloe_sp._9924 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCC Neotyphodium_occultans_992_1 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCC Neotyphodium_coenophialum_e19_3 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCC Epichloe_baconii_ATCC76552 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCAC Epichloe_baconii_ATCC200745 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCC Epichloe_amarillans_906 GCGGTATT--CGAGAACTGT-AGCTGACCGTTTTCTTTCCCTCTTTTCCC Epichloe_amarillans_ATCC200743 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCC Neotyphodium_chisosum_134_2 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCC Neotyphodium_stromatolongum_Cnj6611 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTCCCC Neotyphodium_stromatolongum_Cnj6617 GCGGTATT--CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTCCCC Epichloe_brachyelytri_ATCC200752 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTT----------CTTTCC Epichloe_brachyelytri_ATCC201561 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTT----------CTTTCC Epichloe_bromicola_9633 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTC----------CTTCCC Epichloe_bromicola_9630 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTC----------CTTCCC Neotyphodium_sinofestucae_Fnj6606_1 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTC----------CTTCCC Fnj7409_1 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTC----------CTTCCC Fnj7402_1 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTC----------CTTCCC Fnj7405_1 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTC----------CTTCCC Neotyphodium_siegelii_e915_1 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTC----------CTTCCC Epichloe_yangzii_Rnj4201 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTC----------CTTCCC Epichloe_yangzii_Rnj3302 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTC----------CTTCCC Epichloe_yangzii_Rnj4301 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTC----------CTTCCC Neotyphodium_sinofestucae_Fnj4602_1 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTC----------CTTCCC Neotyphodium_occultans_992_2 GCTGTATT--CGAGAACTGT-AGCTGACCTTTTC----------CTTTTC Epichloe_liyangensis_Ply9101_1 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTC----------CTTCCC Epichloe_liyangensis_Ply9102_1 GCGGTATT--CGAGAACTGT-CGCTGACATTTTA----------CTTCCC Neotyphodium_sinicum_Rts2102_1 GCGGTATT--CGAGAACTGT-CGCTGACATTTTA----------CTTCCC Neotyphodium_sinicum_Rxy6106_1 GCGGTATT--CGAGAACTGT-CGCTGACATTTTA----------CTTCCC Neotyphodium_chisosum_134_1 GCGGTATT--CGAGAACTGT-AGCTGACATTTTA----------CTTCCC Epichloe_elymi_ATCC200850 GCGGTATT--CGAGAACTGTTAGCTGACCTTTTT----------CTTCCC Epichloe_elymi_ATCC201554 GCGGTATT--CGAGAACTGTTAGCTGACCTTTTT----------CTTCCC Neotyphodium_melicicola_827_2 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTTT---------CTTTCC Neotyphodium_aotearoae_829 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTTT---------CTTTCC Epichloe_glyceriae_ATCC200747 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTTCTTCCTCTCTTCTCCC Epichloe_glyceriae_ATCC200755 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTTCTTCCCCTCTTCTCCC Neotyphodium_chisosum_134_3 GCGGTATT--CGAGA-CTGT-AGCTGACCTTTTT---------TCTTTCC Neotyphodium_uncinatum_e167 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTT----------CTTTCC Neotyphodium_coenophialum_e19_1 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTT----------CTTTCC Neotyphodium_typhinum_var._canariense_98 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTT----------CTTTCC Epichloe_typhina_ATCC201667 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTT----------CTTTCC Epichloe_typhina_ATCC201669 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTT----------CTTTCC Neotyphodium_huerfanum_ATCC64040 GCGGTATT--CGAGAGCTGT-AGCTGACCTTTTT----------CTTTCC Neotyphodium_tembladerae_1169_2 GCGGTATT--CGAGAGCTGT-AGCTGACCTTTTT----------CTTTCC Neotyphodium_tembladerae_4055_2 GCGGTATT--CGAGAGCTGT-AGCTGACCTTTTT----------CTTTCC Epichloe_liyangensis_Ply9101_2 GCGGTATT--CGAGAGCTGT-AGCTGACCTTTTT----------CTTTCC Epichloe_liyangensis_Ply9102_2 GCGGTATT--CGAGAGCTGT-AGCTGACCTTTTT----------CTTTCC Neotyphodium_sinofestucae_Fnj6606_2 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTT----------CTTTCC Neotyphodium_sinofestucae_Fnj4602_2 GCGGTATT--CGAGAACTGT-AGCTGACCTTTTT----------CTTTCC Neotyphodium_sinicum_Rxy6106_2 GCGGTATT--CGAAAACCGT-AGCTGACCTTTTT----------CTTTCC Neotyphodium_sinicumRts2102_2 GCGGTATT--CGAGAACTGT-AGCTGCCCTTTTT----------CTTTCC Epichloe_sylvatica_ATCC200748 GCGGTATT--CGAAAACCGT-AGCTGACCTTTTT----------CTTTCC Epichloe_sylvatica_ATCC200751 GCGGTATT--CGAAAACCGT-AGCTGACCTTTTT----------CTTTCC Epichloe_typhina_ATCC200739 GCGGTATT--CGAAAACCGT-AGCTGACCTTTTT----------CTTTCC Epichloe_clarkii_ATCC200741 GCGGTATT--CGAAAACCGT-AGCTGACCTTTTTT---------CTTTGC Epichloe_typhina_E432 GCGGTATT--CGAAAACCGT-AGCTGACCTTTTTT---------CTTTGC Epichloe_clarkii_ATCC200742 GCGGTATT--CGAAAACCGT-AGCTGACCTTTTTT---------CTTTGC Epichloe_typhina_ATCC200851 GCTGTATT--CGAAAACCGT-AGCTGACCTTTTTTT-------TCTTTGC Epichloe_typhina_ATCC201666 GCTGTATT--CGAAAACCGT-AGCTGACCTTTTTTT-------TCTTTGC Epichloe_typhina_ATCC201740 GCGGTATT--CGAAAACCGT-AGCTGACCTTTTTT---------CTTTGC Epichloe_typhina_ATCC200738 GCGGTATT--CGAAAACCGT-AGCTGACTTTTTT----------ATTTCC Neotyphodium_guerinii_CBS112036_1 GCGGTATT--CGAAAACCGT-AGCTGACCTTTTT---------TCTTTGC Neotyphodium_guerinii_MYA1235_1 GCGGTATT--CGAAAACCGT-AGCTGACCTTTTT---------TCTTTGC Claviceps_purpurea_ATCC20102 GCCTCACTGGCTGTCACGTTTCACTCTATTCGTTGCTAATGCTCCCTCTC Neotyphodium_guerinii_CBS112036_2 CTCTAGGTTCATCTTCAGACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Neotyphodium_guerinii_MYA1235_2 CTCTAGGTTCATCTTCAGACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Neotyphodium_gansuense_E7080 CTCTAGGTTCATCTTCAGACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Neotyphodium_gansuense_E7082 CTCTAGGTTCATCTTCAGACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Neotyphodium_gansuense_var._inebrians_817 CTCTAGGTTCATCTTCAGACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Neotyphodium_gansuense_var._inebrians_818 CTCTAGGTTCATCTTCAGACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Fnj7409_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Fnj7405_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Fnj7402_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_australiense_937_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_melicicola_827_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Neotyphodium_lolii_135 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Neotyphodium_siegelii_e915_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Epichloe_festucae_ATCC201550 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Epichloe_festucae_ATCC90661 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Neotyphodium_tembladerae_4055_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Neotyphodium_australiense_937_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Neotyphodium_coenophialum_e19_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Neotyphodium_tembladerae_1169_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Epichloe_sp._9924 TTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Neotyphodium_occultans_992_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC--GC Neotyphodium_coenophialum_e19_3 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC--GC Epichloe_baconii_ATCC76552 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC--GC Epichloe_baconii_ATCC200745 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_amarillans_906 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_amarillans_ATCC200743 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_chisosum_134_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_stromatolongum_Cnj6611 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Neotyphodium_stromatolongum_Cnj6617 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Epichloe_brachyelytri_ATCC200752 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_brachyelytri_ATCC201561 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_bromicola_9633 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_bromicola_9630 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_sinofestucae_Fnj6606_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Fnj7409_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Fnj7402_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Fnj7405_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_siegelii_e915_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_yangzii_Rnj4201 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_yangzii_Rnj3302 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_yangzii_Rnj4301 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_sinofestucae_Fnj4602_1 CCCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_occultans_992_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_liyangensis_Ply9101_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_liyangensis_Ply9102_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTGTGACAAATC-CGC Neotyphodium_sinicum_Rts2102_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTGTGACAAATC-CGC Neotyphodium_sinicum_Rxy6106_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTGTGACAAATC-CGC Neotyphodium_chisosum_134_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_elymi_ATCC200850 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_elymi_ATCC201554 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_melicicola_827_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_aotearoae_829 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_glyceriae_ATCC200747 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Epichloe_glyceriae_ATCC200755 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATT-CGC Neotyphodium_chisosum_134_3 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_uncinatum_e167 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-TGC Neotyphodium_coenophialum_e19_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-TGC Neotyphodium_typhinum_var._canariense_98 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-TGC Epichloe_typhina_ATCC201667 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-TGC Epichloe_typhina_ATCC201669 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_huerfanum_ATCC64040 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-TGC Neotyphodium_tembladerae_1169_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-TGC Neotyphodium_tembladerae_4055_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-TGC Epichloe_liyangensis_Ply9101_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-TGC Epichloe_liyangensis_Ply9102_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-TGC Neotyphodium_sinofestucae_Fnj6606_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_sinofestucae_Fnj4602_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_sinicum_Rxy6106_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_sinicumRts2102_2 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_sylvatica_ATCC200748 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_sylvatica_ATCC200751 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_typhina_ATCC200739 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_clarkii_ATCC200741 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_typhina_E432 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_clarkii_ATCC200742 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_typhina_ATCC200851 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_typhina_ATCC201666 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_typhina_ATCC201740 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Epichloe_typhina_ATCC200738 CTCTAGGTTCATCTTCAAACCGGCCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_guerinii_CBS112036_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Neotyphodium_guerinii_MYA1235_1 CTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-CGC Claviceps_purpurea_ATCC20102 CAATAGGTTCACCTTCAGACCGGTCAGTGCGTAAGTA--A?GACTCTCAT Neotyphodium_guerinii_CBS112036_2 CGACCTCGAACGACAG----GCACAAACAACA--TGAAAA--CTCACA-T Neotyphodium_guerinii_MYA1235_2 CGACCTCGAACGACAG----GCACAAACAACA--TGAAAA--CTCACA-T Neotyphodium_gansuense_E7080 CGACCTCGAACGACAG----GCACAAACAACA--TGAAAA--CTCACA-T Neotyphodium_gansuense_E7082 CGACCTCGAACGACAG----GCACAAACAACA--TGAAAA--CTCACA-T Neotyphodium_gansuense_var._inebrians_817 CGACCTCGAACGACAG----GCAGAAACAACA--TGAAAA--CTCACA-T Neotyphodium_gansuense_var._inebrians_818 CGACCTCGAACGACAG----GCAGAAACAACA--TGAAAA--CTCACA-T Fnj7409_2 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Fnj7405_2 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Fnj7402_2 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_australiense_937_2 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_melicicola_827_1 CGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACA-T Neotyphodium_lolii_135 CGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACA-T Neotyphodium_siegelii_e915_2 CGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACA-T Epichloe_festucae_ATCC201550 CGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACA-T Epichloe_festucae_ATCC90661 CGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACA-T Neotyphodium_tembladerae_4055_1 CGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACA-T Neotyphodium_australiense_937_1 CGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACA-T Neotyphodium_coenophialum_e19_2 CGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACA-T Neotyphodium_tembladerae_1169_1 CGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACA-T Epichloe_sp._9924 CGACCTCGAACGACAG----GCACAAAAAGCA--TGAAAAA-CTCACA-T Neotyphodium_occultans_992_1 CGACCTCGAACAACAG----GCACAAACAGCA--TGAAAAATCTCACA-T Neotyphodium_coenophialum_e19_3 CGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAAACTCACA-T Epichloe_baconii_ATCC76552 CGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACA-T Epichloe_baconii_ATCC200745 CGACCTCAAACGACGG----GCACAAACAGCA--TGAAAAA-CTCACA-T Epichloe_amarillans_906 CGACCTCGAACGACAG----GCACAAACAACA--TGAAAAA-CTCACA-T Epichloe_amarillans_ATCC200743 CGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACA-T Neotyphodium_chisosum_134_2 CGACCTCGAACGACAGACAGGCACAAACAGCA--TGAAAAA-CTCACA-T Neotyphodium_stromatolongum_Cnj6611 CGACCTAGAACGAAAG----GCACAAACAGCA--TGAAAAA-CTCACA-T Neotyphodium_stromatolongum_Cnj6617 CGACCTAGAACGAAAG----GCACAAACAGCA--TGAAAAA-CTCACA-T Epichloe_brachyelytri_ATCC200752 CGACCTCGGACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_brachyelytri_ATCC201561 CGACCTCGGACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_bromicola_9633 CGACCTCGAACGACAG----GCACAAATAACACATGGAAAA-CTCACA-T Epichloe_bromicola_9630 CGACCTCGAACGACAG----GCACAAATAACACATGGAAAA-CTCACA-T Neotyphodium_sinofestucae_Fnj6606_1 CGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACA-T Fnj7409_1 CGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACA-T Fnj7402_1 CGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACA-T Fnj7405_1 CGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACA-T Neotyphodium_siegelii_e915_1 CGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACA-T Epichloe_yangzii_Rnj4201 CGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACA-T Epichloe_yangzii_Rnj3302 CGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACA-T Epichloe_yangzii_Rnj4301 CGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACA-T Neotyphodium_sinofestucae_Fnj4602_1 CGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACA-T Neotyphodium_occultans_992_2 CGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACA-T Epichloe_liyangensis_Ply9101_1 CGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACA-T Epichloe_liyangensis_Ply9102_1 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_sinicum_Rts2102_1 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_sinicum_Rxy6106_1 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_chisosum_134_1 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_elymi_ATCC200850 CGACCTAGAACGACGG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_elymi_ATCC201554 CGACCTAGAACGACGG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_melicicola_827_2 CGACCTCGAACGACAG----ACACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_aotearoae_829 CGACCTCGAACGACAG----ACACAAATAACA--TGAAAAA-CTCACA-T Epichloe_glyceriae_ATCC200747 CGACCTCGAGCGACAG----GCACCAATAACA--TGAAAAA-CTCACA-T Epichloe_glyceriae_ATCC200755 CGACCTCGAGCGACAG----GCACCAATAACA--TGAAAAA-CTCACA-T Neotyphodium_chisosum_134_3 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_uncinatum_e167 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_coenophialum_e19_1 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_typhinum_var._canariense_98 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_typhina_ATCC201667 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_typhina_ATCC201669 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_huerfanum_ATCC64040 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_tembladerae_1169_2 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_tembladerae_4055_2 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_liyangensis_Ply9101_2 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_liyangensis_Ply9102_2 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_sinofestucae_Fnj6606_2 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_sinofestucae_Fnj4602_2 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_sinicum_Rxy6106_2 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_sinicumRts2102_2 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_sylvatica_ATCC200748 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_sylvatica_ATCC200751 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_typhina_ATCC200739 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_clarkii_ATCC200741 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_typhina_E432 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_clarkii_ATCC200742 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_typhina_ATCC200851 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_typhina_ATCC201666 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Epichloe_typhina_ATCC201740 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAAACTCACA-T Epichloe_typhina_ATCC200738 CGACCTCGAACGACAAG---GCACAGATAACA--TGAAAAA-CTCACA-T Neotyphodium_guerinii_CBS112036_1 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Neotyphodium_guerinii_MYA1235_1 CGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACA-T Claviceps_purpurea_ATCC20102 CGACATCGAATGCTGG--------AAACGACG---GAAGACTTATGCAAT Neotyphodium_guerinii_CBS112036_2 TTATTTGGGCAGGGTA-CCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_guerinii_MYA1235_2 TTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_gansuense_E7080 TTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_gansuense_E7082 TTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_gansuense_var._inebrians_817 TTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_gansuense_var._inebrians_818 TTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Fnj7409_2 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Fnj7405_2 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Fnj7402_2 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_australiense_937_2 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_melicicola_827_1 TCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_lolii_135 TCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_siegelii_e915_2 TCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_festucae_ATCC201550 TCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_festucae_ATCC90661 TCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_tembladerae_4055_1 TCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_australiense_937_1 TCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_coenophialum_e19_2 TCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_tembladerae_1169_1 TCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_sp._9924 TCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_occultans_992_1 TCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_coenophialum_e19_3 TCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_baconii_ATCC76552 TCTTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_baconii_ATCC200745 TCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_amarillans_906 TCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_amarillans_ATCC200743 TCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_chisosum_134_2 TCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_stromatolongum_Cnj6611 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_stromatolongum_Cnj6617 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_brachyelytri_ATCC200752 TTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_brachyelytri_ATCC201561 TTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_bromicola_9633 TTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_bromicola_9630 TTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_sinofestucae_Fnj6606_1 TTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Fnj7409_1 TTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Fnj7402_1 TTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Fnj7405_1 TTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_siegelii_e915_1 TTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_yangzii_Rnj4201 TTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_yangzii_Rnj3302 TTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_yangzii_Rnj4301 TTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_sinofestucae_Fnj4602_1 TTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_occultans_992_2 TTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_liyangensis_Ply9101_1 TTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_liyangensis_Ply9102_1 TTCATTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_sinicum_Rts2102_1 TTCATTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_sinicum_Rxy6106_1 TTCATTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_chisosum_134_1 TTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_elymi_ATCC200850 TTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_elymi_ATCC201554 TTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_melicicola_827_2 TTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_aotearoae_829 TTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_glyceriae_ATCC200747 TTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_glyceriae_ATCC200755 TTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_chisosum_134_3 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_uncinatum_e167 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_coenophialum_e19_1 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_typhinum_var._canariense_98 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_typhina_ATCC201667 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_typhina_ATCC201669 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_huerfanum_ATCC64040 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_tembladerae_1169_2 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_tembladerae_4055_2 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_liyangensis_Ply9101_2 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_liyangensis_Ply9102_2 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_sinofestucae_Fnj6606_2 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_sinofestucae_Fnj4602_2 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_sinicum_Rxy6106_2 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_sinicumRts2102_2 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_sylvatica_ATCC200748 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_sylvatica_ATCC200751 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_typhina_ATCC200739 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_clarkii_ATCC200741 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_typhina_E432 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_clarkii_ATCC200742 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_typhina_ATCC200851 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_typhina_ATCC201666 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_typhina_ATCC201740 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Epichloe_typhina_ATCC200738 TGACTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_guerinii_CBS112036_1 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_guerinii_MYA1235_1 TGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTC Claviceps_purpurea_ATCC20102 TCCTCTCGACAGGGTAACCAAATCGGTGCTGCTTTCTGGCAGACCATCTC Neotyphodium_guerinii_CBS112036_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_guerinii_MYA1235_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_gansuense_E7080 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_gansuense_E7082 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_gansuense_var._inebrians_817 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_gansuense_var._inebrians_818 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Fnj7409_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Fnj7405_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Fnj7402_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_australiense_937_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_melicicola_827_1 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_lolii_135 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_siegelii_e915_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_festucae_ATCC201550 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_festucae_ATCC90661 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_tembladerae_4055_1 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_australiense_937_1 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_coenophialum_e19_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_tembladerae_1169_1 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_sp._9924 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_occultans_992_1 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_coenophialum_e19_3 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_baconii_ATCC76552 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_baconii_ATCC200745 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_amarillans_906 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_amarillans_ATCC200743 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_chisosum_134_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_stromatolongum_Cnj6611 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_stromatolongum_Cnj6617 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_brachyelytri_ATCC200752 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_brachyelytri_ATCC201561 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_bromicola_9633 TGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGC Epichloe_bromicola_9630 TGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGC Neotyphodium_sinofestucae_Fnj6606_1 TGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGC Fnj7409_1 TGGCGAGCACGGTCTCGACAGCGATGGTGTGTACAACGGTACCTCCGAGC Fnj7402_1 TGGCGAGCACGGTCTCGACAGCGATGGTGTGTACAACGGTACCTCCGAGC Fnj7405_1 TGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGATACCTCCGAGC Neotyphodium_siegelii_e915_1 TGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGC Epichloe_yangzii_Rnj4201 TGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGC Epichloe_yangzii_Rnj3302 TGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGC Epichloe_yangzii_Rnj4301 TGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGC Neotyphodium_sinofestucae_Fnj4602_1 TGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGC Neotyphodium_occultans_992_2 TGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGC Epichloe_liyangensis_Ply9101_1 TGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGC Epichloe_liyangensis_Ply9102_1 TGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGC Neotyphodium_sinicum_Rts2102_1 TGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGC Neotyphodium_sinicum_Rxy6106_1 TGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTTCGAGC Neotyphodium_chisosum_134_1 TGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGC Epichloe_elymi_ATCC200850 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_elymi_ATCC201554 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_melicicola_827_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_aotearoae_829 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_glyceriae_ATCC200747 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_glyceriae_ATCC200755 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_chisosum_134_3 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_uncinatum_e167 TGGCGAGCACGGCCTCGACAGTAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_coenophialum_e19_1 TGGCGAGCACGGCCTCGACAGTAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_typhinum_var._canariense_98 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_typhina_ATCC201667 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_typhina_ATCC201669 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_huerfanum_ATCC64040 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_tembladerae_1169_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_tembladerae_4055_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_liyangensis_Ply9101_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_liyangensis_Ply9102_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_sinofestucae_Fnj6606_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_sinofestucae_Fnj4602_2 TGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_sinicum_Rxy6106_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_sinicumRts2102_2 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_sylvatica_ATCC200748 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCGGAGC Epichloe_sylvatica_ATCC200751 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_typhina_ATCC200739 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_clarkii_ATCC200741 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_typhina_E432 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_clarkii_ATCC200742 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_typhina_ATCC200851 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_typhina_ATCC201666 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_typhina_ATCC201740 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Epichloe_typhina_ATCC200738 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_guerinii_CBS112036_1 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Neotyphodium_guerinii_MYA1235_1 TGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGC Claviceps_purpurea_ATCC20102 TGGCGAGCACGGCCTCGACAGCAGTGGTGTGTACAATGGTACCTCGGAGC Neotyphodium_guerinii_CBS112036_2 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTT--TTCATA Neotyphodium_guerinii_MYA1235_2 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTT--TTCATA Neotyphodium_gansuense_E7080 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTT--TTCATA Neotyphodium_gansuense_E7082 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTT--TTCATA Neotyphodium_gansuense_var._inebrians_817 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTT--TTCATA Neotyphodium_gansuense_var._inebrians_818 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTT--TTCATA Fnj7409_2 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT--------- Fnj7405_2 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT--------- Fnj7402_2 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT--------- Neotyphodium_australiense_937_2 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT--------- Neotyphodium_melicicola_827_1 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_lolii_135 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_siegelii_e915_2 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_festucae_ATCC201550 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_festucae_ATCC90661 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_tembladerae_4055_1 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_australiense_937_1 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_coenophialum_e19_2 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_tembladerae_1169_1 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_sp._9924 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_occultans_992_1 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_coenophialum_e19_3 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_baconii_ATCC76552 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_baconii_ATCC200745 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_amarillans_906 TCCAGCTTGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_amarillans_ATCC200743 TCCAGCTTGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_chisosum_134_2 TCCAGCTTGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_stromatolongum_Cnj6611 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_stromatolongum_Cnj6617 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_brachyelytri_ATCC200752 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_brachyelytri_ATCC201561 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_bromicola_9633 TCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_bromicola_9630 TCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_sinofestucae_Fnj6606_1 TCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTC--TTCATA Fnj7409_1 TCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTC--TTCATA Fnj7402_1 TCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTC--TTCATA Fnj7405_1 TCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_siegelii_e915_1 TCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_yangzii_Rnj4201 TCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_yangzii_Rnj3302 TCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_yangzii_Rnj4301 TCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_sinofestucae_Fnj4602_1 TCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_occultans_992_2 TCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_liyangensis_Ply9101_1 TCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_liyangensis_Ply9102_1 TCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_sinicum_Rts2102_1 TCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_sinicum_Rxy6106_1 TCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_chisosum_134_1 TCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_elymi_ATCC200850 TCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_elymi_ATCC201554 TCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_melicicola_827_2 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_aotearoae_829 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_glyceriae_ATCC200747 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Epichloe_glyceriae_ATCC200755 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTC--TTCATA Neotyphodium_chisosum_134_3 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT--------- Neotyphodium_uncinatum_e167 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT--------- Neotyphodium_coenophialum_e19_1 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT--------- Neotyphodium_typhinum_var._canariense_98 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT--------- Epichloe_typhina_ATCC201667 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT--------- Epichloe_typhina_ATCC201669 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT--------- Neotyphodium_huerfanum_ATCC64040 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT--------- Neotyphodium_tembladerae_1169_2 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTT-------- Neotyphodium_tembladerae_4055_2 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT--------- Epichloe_liyangensis_Ply9101_2 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTC--T----- Epichloe_liyangensis_Ply9102_2 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTC--T----- Neotyphodium_sinofestucae_Fnj6606_2 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTC--T----- Neotyphodium_sinofestucae_Fnj4602_2 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTC--T----- Neotyphodium_sinicum_Rxy6106_2 TCCAGCTCGAGCGCATGAGTGTCTACTTCAACGAGGCAAGTC--TTCATA Neotyphodium_sinicumRts2102_2 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTC--T----- Epichloe_sylvatica_ATCC200748 TCCAGCTCGAGCGCATGAGTGTCTACTTCAACGAGGCAAGTC--TTCATA Epichloe_sylvatica_ATCC200751 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTC--TTCATA Epichloe_typhina_ATCC200739 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTC--TTCATA Epichloe_clarkii_ATCC200741 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTC--TTCATA Epichloe_typhina_E432 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTC--TTCATA Epichloe_clarkii_ATCC200742 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTC--TTCATA Epichloe_typhina_ATCC200851 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTC--TTCATA Epichloe_typhina_ATCC201666 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTC--TTCATA Epichloe_typhina_ATCC201740 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTC--TTCATA Epichloe_typhina_ATCC200738 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTC--TTCATA Neotyphodium_guerinii_CBS112036_1 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTC--TTCATA Neotyphodium_guerinii_MYA1235_1 TCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTC--TTCATA Claviceps_purpurea_ATCC20102 AACAGCTCGAGCGCATGAGCGTCTACTTCAATGAGGTGTGTAAATTGATA Neotyphodium_guerinii_CBS112036_2 ATCAAAAAA-GTCTCCATTGAGCTGCATAC----CGCTCTGGAGATGAGA Neotyphodium_guerinii_MYA1235_2 ATCAAAAAA-GTCTCCATTGAGCTGCATAC----CGCTCTGGAGATGAGA Neotyphodium_gansuense_E7080 ATCAAAAA--GTCTCCATTGAGCTGCATAC----CGCTCTGGAGATAAGA Neotyphodium_gansuense_E7082 ATCAAAAA--GTCTCCATTGAGCTGCATAC----CGCTCTGGAGATAAGA Neotyphodium_gansuense_var._inebrians_817 ATCAAAAAA-GTCTCCATTGAGCTGCATAC----CGCTCTGGAGATGAGA Neotyphodium_gansuense_var._inebrians_818 ATCAAAAAA-GTCTCCATTGAGCTGCATAC----CGCTCTGGAGATGAGA Fnj7409_2 ------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Fnj7405_2 ------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Fnj7402_2 ------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Neotyphodium_australiense_937_2 ------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Neotyphodium_melicicola_827_1 ATCTAAA---GTCTCCATTGAGCTACATACATACCGGCCCGGAGATGGGA Neotyphodium_lolii_135 ATCTAAA---GTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGA Neotyphodium_siegelii_e915_2 ATCTAAA---GTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGA Epichloe_festucae_ATCC201550 ATCTAAA---GTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGA Epichloe_festucae_ATCC90661 ATCTAAA---GTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGA Neotyphodium_tembladerae_4055_1 ATCTAAA---GTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGA Neotyphodium_australiense_937_1 ATCTAAA---GTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGA Neotyphodium_coenophialum_e19_2 ATCTAAA---GTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGA Neotyphodium_tembladerae_1169_1 ATCTAAA---GTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGA Epichloe_sp._9924 ATCTAAA---GTCTCCATTGAGCTACATACATACCGCCCCGGAGATGAGA Neotyphodium_occultans_992_1 ATCTAAA---GTCTCCGTTGAGCTACATACATACCGCCCCGGAGATGAAA Neotyphodium_coenophialum_e19_3 ATCTAAA---GTCTCCGTTGAGCTACATACATACCGCCCCGGAGATGAGA Epichloe_baconii_ATCC76552 ATCTAAA---GTCTCCGTTGAGCTACATACATACCGCCCCGGAGATGAGA Epichloe_baconii_ATCC200745 ATCTAAA---GTCTCCATTGAGCTACATACATACCGCCCCGGAGATGAGA Epichloe_amarillans_906 ATCTAAA---GTCTCCATTGAGCTACATACATACCGCCCCGGAGATGAGA Epichloe_amarillans_ATCC200743 ATCTAAA---GTCTCCATTGAGCTACATACATACCGCCCCGGAGATGAGA Neotyphodium_chisosum_134_2 ATCTAAA---GTCTCCATTGAGCTACATACATACCGCCCCGGAGATGAGA Neotyphodium_stromatolongum_Cnj6611 ATCTAAA---GTTTCCATTGAGCTACATACATACCGCCCCGGAGATGAGA Neotyphodium_stromatolongum_Cnj6617 ATCTAAA---GTTTCCATTGAGCTACATACATACCGCCCCGGAGATGAGA Epichloe_brachyelytri_ATCC200752 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Epichloe_brachyelytri_ATCC201561 ATCTAAA---GTCTCCATTGAGCTACACAC----CGCCCTGGAGATGAGA Epichloe_bromicola_9633 ATCTAAA---GTCTCCATTGAGCTGCATAC----CGCCCTGGAGATGAGA Epichloe_bromicola_9630 ATCTAAA---GTCTCCATTGAGCTGCATAC----CGCCCTGGAGATGAGA Neotyphodium_sinofestucae_Fnj6606_1 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Fnj7409_1 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Fnj7402_1 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Fnj7405_1 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Neotyphodium_siegelii_e915_1 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGCAGATGAGA Epichloe_yangzii_Rnj4201 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Epichloe_yangzii_Rnj3302 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Epichloe_yangzii_Rnj4301 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Neotyphodium_sinofestucae_Fnj4602_1 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Neotyphodium_occultans_992_2 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Epichloe_liyangensis_Ply9101_1 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Epichloe_liyangensis_Ply9102_1 ATTTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Neotyphodium_sinicum_Rts2102_1 ATTTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Neotyphodium_sinicum_Rxy6106_1 ATTTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Neotyphodium_chisosum_134_1 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATTAGA Epichloe_elymi_ATCC200850 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Epichloe_elymi_ATCC201554 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Neotyphodium_melicicola_827_2 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Neotyphodium_aotearoae_829 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Epichloe_glyceriae_ATCC200747 ATCTAAA---GTCTCCATTGAGCTATATAC----CGCCCTGGAGATGAGA Epichloe_glyceriae_ATCC200755 ATCTAAA---GTCTCCATTGAGCTATATAC----CGCCCTGGAGATGAGA Neotyphodium_chisosum_134_3 ------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Neotyphodium_uncinatum_e167 ------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA Neotyphodium_coenophialum_e19_1 ------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA Neotyphodium_typhinum_var._canariense_98 ------------CTCCATTGAGCTACATAC----CGCCCTGAAGATGGGA Epichloe_typhina_ATCC201667 ------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA Epichloe_typhina_ATCC201669 ------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA Neotyphodium_huerfanum_ATCC64040 ------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA Neotyphodium_tembladerae_1169_2 ------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA Neotyphodium_tembladerae_4055_2 ------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA Epichloe_liyangensis_Ply9101_2 --------------CCATTGAGCTACATAC----CGCCCTGGAGATGGGA Epichloe_liyangensis_Ply9102_2 --------------CCATTGAGCCACATAC----CGCCCTGGAGATGGGA Neotyphodium_sinofestucae_Fnj6606_2 --------------CCATTGAGCTACATAC----CGCCCTGGAGATGAGA Neotyphodium_sinofestucae_Fnj4602_2 --------------CCATTGAGCTACATAC----CGCCCTGGAGATGAGA Neotyphodium_sinicum_Rxy6106_2 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA Neotyphodium_sinicumRts2102_2 --------------CCATTGAGCTACATAC----CGCCCTGGAGATGAGA Epichloe_sylvatica_ATCC200748 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA Epichloe_sylvatica_ATCC200751 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA Epichloe_typhina_ATCC200739 ATCTAAA---GTCTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA Epichloe_clarkii_ATCC200741 ATCTACAAAAGTCTCCATTGAGCTACATAC----TGCCCTGGAGATGGGG Epichloe_typhina_E432 ATCTACAAAAGTCTCCATTGAGCTACATAC----TGCCCTGGAGATGGGG Epichloe_clarkii_ATCC200742 ATCTACAAAAGTCTCCATTGAGCTACATAC----TGCCCTGGAGATGGGG Epichloe_typhina_ATCC200851 ATCTAAAAAAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATTGGA Epichloe_typhina_ATCC201666 ATCTAAAAAAGTCCCCATTGAGCTACATAC----CGCCCTGGAGATTGGA Epichloe_typhina_ATCC201740 ATCTAAAAAAGTCTCTATTGAGCTACATAC----CGCCCCGGAGATGGGA Epichloe_typhina_ATCC200738 ATCTAAAAAAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA Neotyphodium_guerinii_CBS112036_1 ATCTAAAAAAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA Neotyphodium_guerinii_MYA1235_1 ATCTAAAAAAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA Claviceps_purpurea_ATCC20102 AAGCAAA----TCTCTACCAATATGCAATC---CCTCGCTGCATGCCGGC Neotyphodium_guerinii_CBS112036_2 ---CGGAAAGAGAACGAAAGATAAAAAG--AAAAAATGTTA--ACATGCT Neotyphodium_guerinii_MYA1235_2 ---CGGAAAGAGAACGAAAGATAAAAAG--AAAAAATGTTA--ACATGCT Neotyphodium_gansuense_E7080 ---CGGAAAGAGAACGAAAAAAAAAAAAGAAGAAGGTTTTT--TCATGCT Neotyphodium_gansuense_E7082 ---CGGAAAGAGAACGAAAAAAAAAAAAGAAAAAGGTTTTT--TCATGCT Neotyphodium_gansuense_var._inebrians_817 ---CGGAAAGAGAACGAAAAAAAAAAAA--AAAAAGTGTTG--TCATGCT Neotyphodium_gansuense_var._inebrians_818 ---CGGAAAGAGAACGAAAAAAAAAAAA--AAAAAGTGTTG--TCATGCT Fnj7409_2 ---CGGAAAGAGAAGGAAAGA----------AAAAGTGTTA--TCATGCT Fnj7405_2 ---CGGAAAGAGAAGGAAAGA----------AAAAGTGTTA--TCATGCT Fnj7402_2 ---CGGAAAGAGAAGGAAAGA----------AAAAGTGTTA--TCATGTT Neotyphodium_australiense_937_2 ---CGGAAAGAGAAGGAAAGA----------AAAAGTGTTA--TCATGCT Neotyphodium_melicicola_827_1 ---CGGAAAGAGAACGAAAGA----------AAAAGTGTTA--TCATGCT Neotyphodium_lolii_135 ---CGGAAAGAGAACGAAAGA----------AAAAGTGTTA--TCATGCT Neotyphodium_siegelii_e915_2 ---CGGAAAGAGAACGAAAGA----------AAAAGTGTTA--TCATGCT Epichloe_festucae_ATCC201550 ---CGGAAAGAGAACGAAAGA----------AAAAGTGTTA--TCATGCT Epichloe_festucae_ATCC90661 ---CGGAAAGAGAACGAAAGA----------AAAAGTGTTA--TCATGCT Neotyphodium_tembladerae_4055_1 ---CGGAAAGAGAACGAAAGA----------AAAAGTGTTA--TCATGCT Neotyphodium_australiense_937_1 ---CGGAAAGAGAACGAAAGA----------AAAAGTGTTA--TCATGCT Neotyphodium_coenophialum_e19_2 ---CGGAAAGAGAACGAAAGA----------AAAAGTGTTA--TCATGCT Neotyphodium_tembladerae_1169_1 ---CGGAAAGAGAACGAAAGA----------AAAAGTGTTA--TCATGCT Epichloe_sp._9924 ---CGGAAAGAGAACGAAAGA----------AAAAGTGTTA--TCATGCT Neotyphodium_occultans_992_1 ---CGGAAAGAGAACGAAAGA----------AAAAGTGTTA--TCATGCT Neotyphodium_coenophialum_e19_3 ---CGGAAAGAGAACGAAAGA----------AAAAGTGTTA--TCATGCT Epichloe_baconii_ATCC76552 ---CGGAAAAAGAACGAAAGA----------AAAAGTGCTA--TCATGCT Epichloe_baconii_ATCC200745 ---CGGGAAGAGAACGAAAGA----------AAAAGTGTTA--TCATGCT Epichloe_amarillans_906 ---CGGAAAGAGAACGAGAGA----------AAAAGTGTCA--TCATGCT Epichloe_amarillans_ATCC200743 ---CGGAAAGAGAACGAGAGA----------AAAAGTGTCA--TCATGCT Neotyphodium_chisosum_134_2 ---CGGAAAGAGAACGAGAGA----------AAAAGTGTCA--TCATGCT Neotyphodium_stromatolongum_Cnj6611 ---CGGAAAGAGAACGAGAGA----------AAAAGTGCTA--TCATGCT Neotyphodium_stromatolongum_Cnj6617 ---CGGAAAGAGAACGAGAGA----------AAAAGTGCTA--TCATGCT Epichloe_brachyelytri_ATCC200752 ---CGGAAAGAGAAGGAAAGA----------AAAAGTGTCA--TCATGCT Epichloe_brachyelytri_ATCC201561 ---CGGAAAGAGAAGGAAAGA----------AAAAGTGTCA--TCATGCT Epichloe_bromicola_9633 ---CGGAAAGAGAACGATA------------AAAAGTGTTA--ACATGCT Epichloe_bromicola_9630 ---CGGAAAGAGAACGATA------------AAAAGTGTTA--ACATGCT Neotyphodium_sinofestucae_Fnj6606_1 ---CGGAAAGAGAACGATA------------AAAAGTGTTA--ACATGCT Fnj7409_1 ---CGGAAAGAGAACGATA------------AAAAGTGTTA--ACATGCT Fnj7402_1 ---CGGAAAGAGAACGATA------------AAAAGTGTTA--ACATGCT Fnj7405_1 ---CGGAAAGAGAACGATA------------AAAAGTGTTA--ACATGCT Neotyphodium_siegelii_e915_1 ---CGGAAAGAGAACGATA------------AAAAGTGTTA--ACATGCT Epichloe_yangzii_Rnj4201 TTTCGGAAAGAGAACGATA------------AAAAGTGTTA--ACATGCT Epichloe_yangzii_Rnj3302 TTTCGGAAAGAGAACGATA------------AAAAGTGTTA--ACATGCT Epichloe_yangzii_Rnj4301 TTTCGGAAAGGGAACGATA------------AAAAGTGTTA--ACATGCT Neotyphodium_sinofestucae_Fnj4602_1 ---CGGAAAGAGAACGATA------------AAAAGTGTTA--ACATGCT Neotyphodium_occultans_992_2 ---CGGAAAGAGATCGATA------------AAAAGTGTGA--ACATGCT Epichloe_liyangensis_Ply9101_1 TTTCGGAAAGAGAACGATG------------AAAAGTGTT---------- Epichloe_liyangensis_Ply9102_1 ---CGGAAAGAGAACGATG------------AAAAGTGTT---------- Neotyphodium_sinicum_Rts2102_1 ---CGGAAAGAGAACGATG------------AAAAGTGTTA--ACATGCT Neotyphodium_sinicum_Rxy6106_1 ---CGGAAAGAGAACGATG------------AAAAGTGTTA--ACATGCT Neotyphodium_chisosum_134_1 ---CGGAAAGAGAACGATG------------AAAAGTGTTA--ACATGCT Epichloe_elymi_ATCC200850 ---CGGAAAGAGAACGAAAGA----------AAAAGTGTCATCATATGCT Epichloe_elymi_ATCC201554 ---CGGAAAGAGAACGAAAGA----------AAAAGTGTCATCATATGCT Neotyphodium_melicicola_827_2 ---CGGAAAGAGAAGGAAAGA----------AAAAGTGCCA--TCATGCT Neotyphodium_aotearoae_829 ---CGGAAAGAGAAGGAAAGA----------AAAAGTGCCA--TCATGCT Epichloe_glyceriae_ATCC200747 ---CGGAAAGAGAACGAAAGA----------AAAAGTGTCA--TAATGCT Epichloe_glyceriae_ATCC200755 ---CGGAAAGAGAACGAAAGA----------AAAAGTGTCA--TAATGCT Neotyphodium_chisosum_134_3 ---CGGAAAGAGAAGGAAAGA----------AAAAGTGTTA--TCATGCT Neotyphodium_uncinatum_e167 ---CGGAAAAAGAAGGAAAGA----------AAAAGTGTTA--TCATGCT Neotyphodium_coenophialum_e19_1 ---CGGAAAAAGAAGGAAAGA----------AAAAGTGTTA--TCATGCT Neotyphodium_typhinum_var._canariense_98 ---CGGAAAAAGAAGGAAAGA----------AAAAGTGTTA--TCATGCT Epichloe_typhina_ATCC201667 ---CGGAAAAAGAAGGAAAGA----------AAAAGTGTTA--TCATGCT Epichloe_typhina_ATCC201669 ---CGGAAAGAGAAGGAAAGA----------AAAAGTGTTA--TCATGCT Neotyphodium_huerfanum_ATCC64040 ---CGGAAAAAGAAGGAAAGA----------AAAAGTGTTA--TCATGCT Neotyphodium_tembladerae_1169_2 ---CGGAAAAAGAAGGAAAGA----------AAAAGGTTTA--TCATGCT Neotyphodium_tembladerae_4055_2 ---CGGAAAAAGAAGGAAAGA----------AAAAGGTTTA--TCATGCT Epichloe_liyangensis_Ply9101_2 ---CGGAAAAAGAAGGAAAGA----------AAAAGTGTTA--TCATGCT Epichloe_liyangensis_Ply9102_2 ---CGGAAAAAGAAGGAAAGA----------AAAAGTGTTA--TCATGCT Neotyphodium_sinofestucae_Fnj6606_2 ---CGGAAAGAGAAGGAAAGA----------AAAAGTGTTA--TCAT--- Neotyphodium_sinofestucae_Fnj4602_2 ---CGGAAAGAGAAGGAAAGA----------AAAAGTGTTA--TCAT--- Neotyphodium_sinicum_Rxy6106_2 ---CGGAAAAAGAAGGAAAGA----------AAAAGTGTTA--TCA---- Neotyphodium_sinicumRts2102_2 ---CGGAAAGAGAAGGAAAGA----------AAAGGTGTTA--TCATGCT Epichloe_sylvatica_ATCC200748 ---CGGAAAAAGAAGGAAAGA----------AAAAGTGTTA--TCATGCT Epichloe_sylvatica_ATCC200751 ---CGGAAAAAGAAGGAAAGA----------AAAAGTGTTA--TCATGCC Epichloe_typhina_ATCC200739 ---CGGAAAAAGAGGGAAAGA----------AAAAGTGTTA--TCATGCT Epichloe_clarkii_ATCC200741 ---CGGGAGAAGATGGAAAGG----------AAAAGTGTTA--TCATGCT Epichloe_typhina_E432 ---CGGGAGAAGATGGAAAGG----------AAAAGTGTTA--TCATGCT Epichloe_clarkii_ATCC200742 ---CGGGAGAAGATGGAAAGG----------AAAAGTGTTA--TCATGCT Epichloe_typhina_ATCC200851 ---CAGGAAAAGATGGAAAGA----------AAAAGTGCCA--TCATGCT Epichloe_typhina_ATCC201666 ---CAGGAAAAG-------------------------------------- Epichloe_typhina_ATCC201740 ---CGGGAAAAGAAGCAAATA----------AAACGTGTTA--TCATGCT Epichloe_typhina_ATCC200738 ---CGGGAAAAGAAGCGAAGA----------AAAAGTATTA--TCATGCT Neotyphodium_guerinii_CBS112036_1 ---CGGGAAAAGAAGCGAAGA----------AAAAGTATTA--TCATGCT Neotyphodium_guerinii_MYA1235_1 ---CGGGAAAAGAAGCGAAGA----------AAAAGTATTA--TCATGCT Claviceps_purpurea_ATCC20102 ---TGGAGAATGTCCCACAATGAGATGT---GAGCAACCTGGGTCATGCT Neotyphodium_guerinii_CBS112036_2 AATCTATGTGA Neotyphodium_guerinii_MYA1235_2 AATCTATGTGA Neotyphodium_gansuense_E7080 AATCTATGTGA Neotyphodium_gansuense_E7082 AATCTATGTGA Neotyphodium_gansuense_var._inebrians_817 AATCTATGTGA Neotyphodium_gansuense_var._inebrians_818 AATCTATGTGA Fnj7409_2 AATCTATGTGA Fnj7405_2 AATCTATGTGA Fnj7402_2 AATCTATGTGA Neotyphodium_australiense_937_2 AATCTATGTGA Neotyphodium_melicicola_827_1 CATCCATGTGA Neotyphodium_lolii_135 CATCCATGTGA Neotyphodium_siegelii_e915_2 CATCCATGTGA Epichloe_festucae_ATCC201550 CATCCATGTGA Epichloe_festucae_ATCC90661 CATCCATGTGA Neotyphodium_tembladerae_4055_1 CATCCATGTGA Neotyphodium_australiense_937_1 CATCCATGTGA Neotyphodium_coenophialum_e19_2 CATCCATGTGA Neotyphodium_tembladerae_1169_1 CATCCATGTGA Epichloe_sp._9924 CATCCATGTGA Neotyphodium_occultans_992_1 CATCCATGTGA Neotyphodium_coenophialum_e19_3 CATCCATGTGA Epichloe_baconii_ATCC76552 CATCCATGTGA Epichloe_baconii_ATCC200745 CATCCATGTGA Epichloe_amarillans_906 CATCCATGTGA Epichloe_amarillans_ATCC200743 CATCCATGTGA Neotyphodium_chisosum_134_2 CATCCATGTGA Neotyphodium_stromatolongum_Cnj6611 CATCCATGTGA Neotyphodium_stromatolongum_Cnj6617 CATCCATGTGA Epichloe_brachyelytri_ATCC200752 AATCTATGTGA Epichloe_brachyelytri_ATCC201561 AATCTATGTGA Epichloe_bromicola_9633 AATCTATGTGA Epichloe_bromicola_9630 AATCTATGTGA Neotyphodium_sinofestucae_Fnj6606_1 AATCTATGTGA Fnj7409_1 AATCTATGTGA Fnj7402_1 AATCTATGTGA Fnj7405_1 AATCTATGTGA Neotyphodium_siegelii_e915_1 AATCTATGTGA Epichloe_yangzii_Rnj4201 AATCTATGTGA Epichloe_yangzii_Rnj3302 AATCTATGTGA Epichloe_yangzii_Rnj4301 AATCTATGTGA Neotyphodium_sinofestucae_Fnj4602_1 AATCTATGTGA Neotyphodium_occultans_992_2 AATCTATGTGA Epichloe_liyangensis_Ply9101_1 ----------- Epichloe_liyangensis_Ply9102_1 ----------- Neotyphodium_sinicum_Rts2102_1 AATCTATGTGA Neotyphodium_sinicum_Rxy6106_1 AATCTATGTGA Neotyphodium_chisosum_134_1 AATCTATGTGA Epichloe_elymi_ATCC200850 AATCTATGTGA Epichloe_elymi_ATCC201554 AATCTATGTGA Neotyphodium_melicicola_827_2 AATCTATGTGA Neotyphodium_aotearoae_829 AATCTATGTGA Epichloe_glyceriae_ATCC200747 AATCTATGTGA Epichloe_glyceriae_ATCC200755 AATCTATGTGA Neotyphodium_chisosum_134_3 AATCTATGTGA Neotyphodium_uncinatum_e167 AATCTATGTGA Neotyphodium_coenophialum_e19_1 AATCTATGTGA Neotyphodium_typhinum_var._canariense_98 AATCTATGTGA Epichloe_typhina_ATCC201667 AATCTATGTGA Epichloe_typhina_ATCC201669 AATCTATGTGA Neotyphodium_huerfanum_ATCC64040 AATCTATGTGA Neotyphodium_tembladerae_1169_2 AATCTATGTGA Neotyphodium_tembladerae_4055_2 AATCTATGTGA Epichloe_liyangensis_Ply9101_2 AATCTATGTGA Epichloe_liyangensis_Ply9102_2 AATCTATGTGA Neotyphodium_sinofestucae_Fnj6606_2 ----------- Neotyphodium_sinofestucae_Fnj4602_2 ----------- Neotyphodium_sinicum_Rxy6106_2 ----------- Neotyphodium_sinicumRts2102_2 A---------- Epichloe_sylvatica_ATCC200748 AATCTATGTGA Epichloe_sylvatica_ATCC200751 CATCTATGTGA Epichloe_typhina_ATCC200739 AATCTATGTGA Epichloe_clarkii_ATCC200741 AATCTATGTGA Epichloe_typhina_E432 AATCTATGTGA Epichloe_clarkii_ATCC200742 AATCTATGTGA Epichloe_typhina_ATCC200851 AATCTATGTGA Epichloe_typhina_ATCC201666 ----------- Epichloe_typhina_ATCC201740 AATCTATGTGA Epichloe_typhina_ATCC200738 AATCTATGTGA Neotyphodium_guerinii_CBS112036_1 AATCTATGTGA Neotyphodium_guerinii_MYA1235_1 AATCTATGTGA Claviceps_purpurea_ATCC20102 AAACTGTGCGA ; END; BEGIN TREES; Title 'Trees from "tubB_submit.nxs.con"'; LINK Taxa = Taxa; TRANSLATE 1 Neotyphodium_guerinii_CBS112036_2, 2 Neotyphodium_guerinii_MYA1235_2, 3 Neotyphodium_gansuense_E7080, 4 Neotyphodium_gansuense_E7082, 5 Neotyphodium_gansuense_var._inebrians_817, 6 Neotyphodium_gansuense_var._inebrians_818, 7 Fnj7409_2, 8 Fnj7405_2, 9 Fnj7402_2, 10 Neotyphodium_australiense_937_2, 11 Neotyphodium_melicicola_827_1, 12 Neotyphodium_lolii_135, 13 Neotyphodium_siegelii_e915_2, 14 Epichloe_festucae_ATCC201550, 15 Epichloe_festucae_ATCC90661, 16 Neotyphodium_tembladerae_4055_1, 17 Neotyphodium_australiense_937_1, 18 Neotyphodium_coenophialum_e19_2, 19 Neotyphodium_tembladerae_1169_1, 20 Epichloe_sp._9924, 21 Neotyphodium_occultans_992_1, 22 Neotyphodium_coenophialum_e19_3, 23 Epichloe_baconii_ATCC76552, 24 Epichloe_baconii_ATCC200745, 25 Epichloe_amarillans_906, 26 Epichloe_amarillans_ATCC200743, 27 Neotyphodium_chisosum_134_2, 28 Neotyphodium_stromatolongum_Cnj6611, 29 Neotyphodium_stromatolongum_Cnj6617, 30 Epichloe_brachyelytri_ATCC200752, 31 Epichloe_brachyelytri_ATCC201561, 32 Epichloe_bromicola_9633, 33 Epichloe_bromicola_9630, 34 Neotyphodium_sinofestucae_Fnj6606_1, 35 Fnj7409_1, 36 Fnj7402_1, 37 Fnj7405_1, 38 Neotyphodium_siegelii_e915_1, 39 Epichloe_yangzii_Rnj4201, 40 Epichloe_yangzii_Rnj3302, 41 Epichloe_yangzii_Rnj4301, 42 Neotyphodium_sinofestucae_Fnj4602_1, 43 Neotyphodium_occultans_992_2, 44 Epichloe_liyangensis_Ply9101_1, 45 Epichloe_liyangensis_Ply9102_1, 46 Neotyphodium_sinicum_Rts2102_1, 47 Neotyphodium_sinicum_Rxy6106_1, 48 Neotyphodium_chisosum_134_1, 49 Epichloe_elymi_ATCC200850, 50 Epichloe_elymi_ATCC201554, 51 Neotyphodium_melicicola_827_2, 52 Neotyphodium_aotearoae_829, 53 Epichloe_glyceriae_ATCC200747, 54 Epichloe_glyceriae_ATCC200755, 55 Neotyphodium_chisosum_134_3, 56 Neotyphodium_uncinatum_e167, 57 Neotyphodium_coenophialum_e19_1, 58 Neotyphodium_typhinum_var._canariense_98, 59 Epichloe_typhina_ATCC201667, 60 Epichloe_typhina_ATCC201669, 61 Neotyphodium_huerfanum_ATCC64040, 62 Neotyphodium_tembladerae_1169_2, 63 Neotyphodium_tembladerae_4055_2, 64 Epichloe_liyangensis_Ply9101_2, 65 Epichloe_liyangensis_Ply9102_2, 66 Neotyphodium_sinofestucae_Fnj6606_2, 67 Neotyphodium_sinofestucae_Fnj4602_2, 68 Neotyphodium_sinicum_Rxy6106_2, 69 Neotyphodium_sinicumRts2102_2, 70 Epichloe_sylvatica_ATCC200748, 71 Epichloe_sylvatica_ATCC200751, 72 Epichloe_typhina_ATCC200739, 73 Epichloe_clarkii_ATCC200741, 74 Epichloe_typhina_E432, 75 Epichloe_clarkii_ATCC200742, 76 Epichloe_typhina_ATCC200851, 77 Epichloe_typhina_ATCC201666, 78 Epichloe_typhina_ATCC201740, 79 Epichloe_typhina_ATCC200738, 80 Neotyphodium_guerinii_CBS112036_1, 81 Neotyphodium_guerinii_MYA1235_1, 82 Claviceps_purpurea_ATCC20102; TREE con_50_majrule = (82:4.601534,(1:0.025528,2:0.025544)0.99:0.109795,((7:0.032267,8:0.031696,9:0.093736,10:0.03239,55:0.032451,(((56:0.033801,57:0.033407)0.97:0.064603,58:0.06454,59:0.032393,(61:0.031857,(62:0.039482,63:0.032877)1.00:0.121925,64:0.031763,65:0.063499)0.94:0.063926)0.89:0.064739,((68:0.034221,70:0.066848)0.93:0.062436,71:0.094178,72:0.062531,(((73:0.031428,74:0.031605,75:0.0313)1.00:0.193112,(76:0.045782,77:0.070914)1.00:0.179608)0.91:0.063706,(78:0.156201,(79:0.254802,80:0.031757,81:0.03107)0.99:0.096904)0.93:0.065163)0.96:0.094879)0.94:0.09731)0.92:0.09654,60:0.032328,66:0.03321,67:0.065682,69:0.09835)0.64:0.079072,((((((((11:0.057032,12:0.028894,13:0.029245,14:0.028194,15:0.028443,16:0.029237,(17:0.035994,18:0.036566)0.64:0.056819,19:0.028714)0.82:0.057875,20:0.088965,(28:0.027992,29:0.027217)1.00:0.238403)0.76:0.057902,(21:0.100295,22:0.03269,23:0.145304)0.93:0.056615,24:0.113664)0.84:0.100734,26:0.027546,27:0.027892)0.67:0.089216,25:0.077818)0.99:0.262689,(53:0.053417,54:0.034945)1.00:0.23021)0.77:0.074211,((((32:0.031797,33:0.031829)0.99:0.110815,34:0.032151,(35:0.033065,36:0.033685)0.93:0.063646,37:0.062844,38:0.06278,39:0.030675,40:0.03118,41:0.060818,42:0.063543,43:0.209604,44:0.060903)0.56:0.080027,((45:0.033436,46:0.030832,47:0.061265)1.00:0.128176,48:0.063407)1.00:0.132695)0.73:0.228378,(49:0.028348,50:0.027706)1.00:0.131767)0.71:0.098317)0.62:0.110396,(30:0.032015,31:0.063344)0.96:0.062743,(51:0.029283,52:0.03241)1.00:0.094316)0.52:0.108267)0.57:0.337632,((3:0.045711,4:0.026003)0.90:0.129476,(5:0.025284,6:0.023843)0.98:0.129875)0.53:0.080347); END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 411; END; BEGIN MRBAYES; Lset nst = 2 rates = gamma; Prset statefreqpr = fixed ( equal ); outgroup Claviceps_purpurea_ATCC20102; mcmcp ngen = 5000000 relburnin = yes burninfrac = 0.25 printfreq = 1000 samplefreq = 1000 nchains = 4 savebrlens = yes; mcmc; sumt; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 411; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 411; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 3653027010564403538; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 5368385740322137267; checksum 0 1607404466 null; endTell; getWindow; tell It; setResourcesState false false 214; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1366 670; setLocation -8 0; setFont SanSerif; setFontSize 10; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #3653027010564403538 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #3653027010564403538; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1152 603; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; endTell; showWindow; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #3653027010564403538 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 1449.1326460916702.1560164410594971095; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1152 603; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.interchange; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; stretchToggle off; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientRight; toggleCorners off; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '(82:4.601534,((7:0.032267,8:0.031696,9:0.093736,66:0.03321,67:0.065682,60:0.032328,10:0.03239,55:0.032451,69:0.09835,(((68:0.034221,70:0.066848)0.93:0.062436,71:0.094178,72:0.062531,(((73:0.031428,74:0.031605,75:0.0313)1.00:0.193112,(76:0.045782,77:0.070914)1.00:0.179608)0.91:0.063706,(78:0.156201,(79:0.254802,80:0.031757,81:0.03107)0.99:0.096904)0.93:0.065163)0.96:0.094879)0.94:0.09731,((56:0.033801,57:0.033407)0.97:0.064603,58:0.06454,59:0.032393,(61:0.031857,(62:0.039482,63:0.032877)1.00:0.121925,64:0.031763,65:0.063499)0.94:0.063926)0.89:0.064739)0.92:0.09654)0.64:0.079072,((((((((11:0.057032,12:0.028894,13:0.029245,14:0.028194,15:0.028443,16:0.029237,(17:0.035994,18:0.036566)0.64:0.056819,19:0.028714)0.82:0.057875,20:0.088965,(28:0.027992,29:0.027217)1.00:0.238403)0.76:0.057902,(21:0.100295,22:0.03269,23:0.145304)0.93:0.056615,24:0.113664)0.84:0.100734,26:0.027546,27:0.027892)0.67:0.089216,25:0.077818)0.99:0.262689,(53:0.053417,54:0.034945)1.00:0.23021)0.77:0.074211,(((48:0.063407,(45:0.033436,46:0.030832,47:0.061265)1.00:0.128176)1.00:0.132695,(42:0.063543,34:0.032151,(35:0.033065,36:0.033685)0.93:0.063646,37:0.062844,(32:0.031797,33:0.031829)0.99:0.110815,39:0.030675,40:0.03118,41:0.060818,38:0.06278,43:0.209604,44:0.060903)0.56:0.080027)0.73:0.228378,(49:0.028348,50:0.027706)1.00:0.131767)0.71:0.098317)0.62:0.110396,(30:0.032015,31:0.063344)0.96:0.062743,(51:0.029283,52:0.03241)1.00:0.094316)0.52:0.108267)0.57:0.337632,(1:0.025528,2:0.025544)0.99:0.109795,((3:0.045711,4:0.026003)0.90:0.129476,(5:0.025284,6:0.023843)0.98:0.129875)0.53:0.080347);'; useSuggestedSize on; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #5368385740322137267 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1152 603; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;