#NEXUS
[written Wed Sep 27 15:20:13 SGT 2017 by Mesquite  version 3.3 (build 854) at 178-212.priv23.nus.edu.sg/172.23.178.212]

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=10;
	TAXLABELS
		'Erysiphe mori ex_Morus_AB000946' 'Erysiphe michikoae ex_Celtis_jessoensis_MUMH5055' 'Erysiphe aphananthes ex_Aphananthe_aspera_MUMH4648' 'Erysiphe kusanoi ex_Celtis_AB475120' 'Erysiphe zelkowae ex_Zelkova_AB475121' 'Erysiphe bivonae ex_Ulmus_AB475115' 'Erysiphe bivonae ex_Ulmus_AB475116' 'Erysiphe kenjiana ex_Ulmus_glable_AB475117' 'Erysiphe kenjiana ex_Ulmus_minor_AB475118' 'Erysiphe kenjiana ex_Ulmus_pumila_AB475119' 
	;

END;


BEGIN CHARACTERS;
	TITLE  Erysiphe_michikoae_ITS;
	DIMENSIONS  NCHAR=555;
	FORMAT DATATYPE = DNA GAP = - MISSING = ?;
	MATRIX
	'Erysiphe mori ex_Morus_AB000946'                   CAGAGCGTG--AGGTCCAGCCGTGGCAGTTGT-CGCGCGCTGGATCGACCCTCCACACCCGTGTCGACTTGTATTTTTTGTTGCTTTGGCGGGCCGGGCTCGCCCATGTT--CGCTT----------------------GAGCATGGCGT-GCTGCCCACCGGCTTCGGCTGGAGCGCGTCCGCCAGAGACCTTACACCCAAA--CTCATGTTGTCCCCCTGTAGTCTAAGATAAGATTTT--AGAATGGAATAAAACTTTCAACAACGGATCTCTTGGCTCTGGTATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACAACCCCCTCGAGCTACCATTCT-GTGTGGCTGCGGTGTTGGGGCTCGCCGCATTTGGCGGCCCTTAAAGACAGTGGCGGTACCGGCGCCGGCTCTACGCGTAGTAAAAGA-CTCGCGACAGAGTGGCGATGGGCGACTAGCC
	'Erysiphe michikoae ex_Celtis_jessoensis_MUMH5055'  CAGAGCGTG--AGGTCCAGCCATGGCAGTTGT-CGTGGGCTGGATCGACCCTC--CACCCGTGTCGACTTGTA-TTTTTGTTGCTTTGGCGGGCCGGGCTCGCCCATGGT--CGCGTTTCGTAC-----------GTGTGCGTATGGCGT-GTTGCCCACCGGCTTCGGCTGGAGCGTGTCCGCCGGAGACTCTATAACCAAAACCTATTGCTGT--CCATGTAGTCTAAGGCAAGA-TTTAAAGAATTG-ATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACAACCCCCTCGAGCTACCCTTTTGGTGTGGCTGCGGTGTTGGGGCTCGCCGCA-TCGGCGGCCCTTAAAGACAGTGGCGGTGCCGACGTTGGCTCTACGCGTAGTAAAATAGCTCGCGACAGAACGGCGCT-GGCGACTAGCC
	'Erysiphe aphananthes ex_Aphananthe_aspera_MUMH4648' CAGAGCGTG--AGGTCCAGCCATGGCAGTTGT-CGTGGGCTGGATCGACCCTC--CACCCGTGTCGACTTATA-ATTTTGTTGCTTTGGCGGGCCGGGCTCGCGCATGGT--CGCCTTTC---------------GAGCGTGTATGGCGT-GCTGTCCACCGGCTTCGGCTGGAGCGTGTCCGCCAGAGACCTTATAACCAAAACCTATTGTTGT--CCTTGTAGTCTAAGGCAAGATTTTAAAGAATTG-ATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTTGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACAACCCCCTCGAGCTACCCTTTTGGTGTGGCTGCGGTGTTGGGGCTCGCCACA-TCGGCGGCCCTTAAAGACAGTGGCGGTGCCGACGTCGGCTCTACGCGTAGTAAAATAGCTCGCGACAGAACGGCGAT-GGTGACTAGCC
	'Erysiphe kusanoi ex_Celtis_AB475120'               CAGAGCGTG--AGGTCCAGCCATGGCAGTTGTCCGTGGGCTGGATC-ACCCTC--CACCCGTGTCGACTTGTA-TTTGTGTTGCTTTGGCGGGCCGGGCTCGCCCATGGTCGCGCGTTTCGTAC-----------GTGTGCGTATGGCGT-GTTGCCCACCGGCTTCGGCTGGAGCGTGTCCGCCGGAGACCCTATAACCAAAACCTATTGCTGT--CCATGTAGTCTAAGGCAAGATTTTAAAGAATTG-ATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACAACCGCCTCGAGCTACCCTTTTGGTGTGGCTGCGGTGTTGGGGCTCGCCGCA-TCGGCGGCCCTTAAAGACAGTGGCGGTGCCGACGTTGGCTCTACGCGTAGTAAAATAGCTCGCGACAGAACGGCGCT-GGCGACTAGCC
	'Erysiphe zelkowae ex_Zelkova_AB475121'             CAGAGCGTGTAAGGTCCAGCCATGGCAGTTGT-CGTGGACTGGATCGACCCTC--CACCCGTGTCGACTTGTA-TTTTTGTTGCTTTGGCGGGCCGGGCTCGCGCATGGT--CGCGTTTCGTAC-----------GTGTGCGTATGGCGTAGTTGCCCACCGGCTACGGCTGGAGCGTGTCCGCCGAAGACCCTACAACCAAAACCTATTGTTGT--CCTTGTAGTCTAAGGCAAGA-TTTACAGAATTG-ATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACAACCCCCTCGAGCTACCCTTTTGGTGTGGCTGCGGTGTTGGGGCTCGCCGCA-TCGGCGGCCCTTAAAGATAGTGGCGGTGCCAACGTTGGCTCTACGCGTAGTAGAATAGCTCGCGACAGAACGGCGCT-GGCGACCAGCC
	'Erysiphe bivonae ex_Ulmus_AB475115'                CAGAGCGTG--AAGTCCAGCCATGGCAGTTGT-CGTGCGCTGGACCGACCCTC--CACCCGTGTCGACTTGTA-TTTATGTTGCTTTGGCGGACCGGGCTCGCCCATGGT--CGCGTTTCGTAC-----------GTGTGCGTATGGCGT-GCTGCCCACCGGCTTCGGCTGGAGCGTGTCCGCCGGAGACCTTATAACCAAAACCTATTGCTGT--CCCTGTAGTCTAAGGCAAGATTTTAAAGAATTG-ATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTACTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACAACCCCCTCGAGCTACCCTTTTGGTGTGGCTGCGGCGTTGGGGCTCGCCACA-TCGGCGGCTCTTAAAGACAGTGGCGGTGCCGACGTCGGCTCTACGCGTAGTAAAATAGCTCGCGACAGAACGGCGAT-GGCGACTAGCC
	'Erysiphe bivonae ex_Ulmus_AB475116'                -----------------------------------------------------------------------------------CTTTGGCGGACCGGGCTCGCCCATGGT--CGCGTTTCGTACGTGTGCGTATGGTGTGCGTATGGTGT-GCTGCCCGCCGGCTTCGGCTGGAGCGTGTCCGCCGGAGACCTTATAACCAAAACCTATTGCCGT--CCCTGTAGTCTAAGGCAAGATTTTAAAGAATTG-ATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACAACCCCCTCGAGCTACCCTTTTGGTGTGGCTGCGGCGTTGGGGCTCG---CA-TCATCGGCCCTTAAAGACAGTGGCGGTGCCGACGTCGGCTCTACGCGTAGTAAGATAGCTCGCGACAGAACGGCGAT-GGCGACTAGCC
	'Erysiphe kenjiana ex_Ulmus_glable_AB475117'        -------------------CCATGGCAGTTGT-CGTGGGCTGGACCGACCCTC--CACCCGTGTCGACTTGTA-TTTTTGTTGCTTTGGCGGACCGGGCTCGCCCATGGT--CGCGTTTCGTAC-----------GTGTGCGTATGGCGT-GCTGCCCACCGGCTTCGGCTGGAGCGTGTCCGCCGGAGACCTTATAACCAAAACCTATTGCCGT--CCCTGTAGTCTAAGGCAAGATTTTAAAGAATTG-ATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACAACCCCCTCGAGCTACCCTTTTGGTGTGGCTGCGGTGTTGGGGCTCGCCACA-TCGGCGGCTCTTAAAGACAGTGGCGGTGCCGACGTCGGCTCTACGCGTAGTAAAATAGCTCGCGACAGAACGGCGAT-GGCGACTAGCC
	'Erysiphe kenjiana ex_Ulmus_minor_AB475118'         CAGAGCGTG--AAGTCCAGCCATGGCAGTTGT-CGTGGGCTGGACCGACCCTC--CACCCGTGTCGACTTGTA-TTTTTGTTGCTTTGGCGGACCGGGCTCGCCCATGGT--CGCGTTTCGTAC-----------GTGTGCGTATGGCGT-GCTGCCCACCGGCTTCGGCTGGAGCGTGTCCGCCGGAGACCTTATAACCAAAACCTATTGCCGT--CCCTGTAGTCTAAGGCAAGATTTTAAAGAATTG-ATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACAACCCCCTCGAGCTACCCTTTTGGTGTGGCTGCGGTGTTGGGGCTCGCCACA-TCGGCGGCTCTTAAAGACAGTGGCGGTGCCGACGTCGGCTCTACGCGTAGTAAAATAGCTCGCGACAGAACGGCGAT-GGCGACTAGCC
	'Erysiphe kenjiana ex_Ulmus_pumila_AB475119'        CAGAGCGTG--AAGTCCAGCCATGGCAGTTGT-CGTGGGCTGGACCGACCCTC--CACCCGTGTCGACTTGTA-TTTTTGTTGCTTTGGCGGACCGGGCTCGCCCATGGT--CGCGTTTCGTAC-----------GTGTGCGTATGGCGT-GCTGCCCACCGGCTTCGGCTGGAGCGTGTCCGCCGGAGACCTTATAACCAAAACCTATTGCCGT--CCCTGTAGTCTAAGGCAAGATTTTAAAGAATTG-ATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACAACCCCCTCGAGCTACCCTTTTGGTGTGGCTGCGGTGTTGGGGCTCGCCACA-TCGGCGGCTCTTAAAGACAGTGGCGGTGCCGACGTCGGCTCTACGCGTAGTAAAATAGCTCGCGACAGAACGGCGAT-GGCGACTAGCC

;



END;

BEGIN MYTREES;
	Title Erysiphe_michikoae_ITS;
	ID 015ec234fcbd34;
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		1 'Erysiphe mori ex_Morus_AB000946',
[1] 		2 'Erysiphe michikoae ex_Celtis_jessoensis_MUMH5055',
[2] 		3 'Erysiphe aphananthes ex_Aphananthe_aspera_MUMH4648',
[3] 		4 'Erysiphe kusanoi ex_Celtis_AB475120',
[4] 		5 'Erysiphe zelkowae ex_Zelkova_AB475121',
[5] 		6 'Erysiphe bivonae ex_Ulmus_AB475115',
[6] 		7 'Erysiphe bivonae ex_Ulmus_AB475116',
[7] 		8 'Erysiphe kenjiana ex_Ulmus_glable_AB475117',
[8] 		9 'Erysiphe kenjiana ex_Ulmus_minor_AB475118',
[9] 		10 'Erysiphe kenjiana ex_Ulmus_pumila_AB475119';
	TREE PAUP_1 = (1,((((2,4),5),((6,7),(8,9,10))),3));
	TREE PAUP_2 = (1,((((2,4),5),3),((6,7),(8,9,10))));
	TREE PAUP_3 = (1,(((2,4,5),((6,7),(8,9,10))),3));
	TREE PAUP_4 = (1,(((2,4),5),(3,((6,7),(8,9,10)))));
	TREE PAUP_5 = (1,((((2,4),5),((6,(8,9,10)),7)),3));
	TREE PAUP_6 = (1,((((2,4),5),(6,(7,(8,9,10)))),3));
	TREE PAUP_7 = (1,((((2,4),5),((6,7),8,9,10)),3));
	TREE PAUP_8 = (1,(((2,4),5),(3,((6,7),8,9,10))));
	TREE PAUP_9 = (1,((((2,4),5),3),((6,7),8,9,10)));
	TREE PAUP_10 = (1,(((2,4),5),(3,((6,(8,9,10)),7))));
	TREE PAUP_11 = (1,((((2,4),5),3),((6,(8,9,10)),7)));
	TREE PAUP_12 = (1,(((2,4),5),(3,(6,(7,(8,9,10))))));
	TREE PAUP_13 = (1,((((2,4),5),3),(6,(7,(8,9,10)))));
	TREE PAUP_14 = (1,((((2,4),5),(((6,7),9,10),8)),3));
	TREE PAUP_15 = (1,(((2,4),5),(3,(((6,7),9,10),8))));
	TREE PAUP_16 = (1,((((2,4),5),3),(((6,7),9,10),8)));
	TREE PAUP_17 = (1,((((2,4),5),((6,8,9,10),7)),3));
	TREE PAUP_18 = (1,((((2,4),5),(6,(7,8,9,10))),3));
	TREE PAUP_19 = (1,((((2,4),5),3),(6,(7,8,9,10))));
	TREE PAUP_20 = (1,((((2,4),5),3),((6,8,9,10),7)));
	TREE PAUP_21 = (1,(((2,4,5),((6,7),8,9,10)),3));
	TREE PAUP_22 = (1,(((2,4,5),(((6,7),9,10),8)),3));
	TREE PAUP_23 = (1,(((2,4,5),(6,(7,(8,9,10)))),3));
	TREE PAUP_24 = (1,(((2,4,5),((6,(8,9,10)),7)),3));
	TREE PAUP_25 = (1,(((2,4,5),(6,(7,8,9,10))),3));
	TREE PAUP_26 = (1,(((2,4,5),((6,8,9,10),7)),3));
	TREE PAUP_27 = (1,(((2,4),5),(3,(6,(7,8,9,10)))));
	TREE PAUP_28 = (1,(((2,4),5),(3,((6,8,9,10),7))));
	TREE PAUP_29 = (1,((((2,4),5),(((6,9,10),8),7)),3));
	TREE PAUP_30 = (1,(((2,4),5),(3,(((6,9,10),8),7))));
	TREE PAUP_31 = (1,((((2,4),5),3),(((6,9,10),8),7)));
	TREE PAUP_32 = (1,(((2,4,5),(((6,9,10),8),7)),3));

END;


BEGIN TREES;
	Title Erysiphe_michikoae_ITS;
	ID 015ec234fcd635;
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		1 'Erysiphe mori ex_Morus_AB000946',
[1] 		2 'Erysiphe michikoae ex_Celtis_jessoensis_MUMH5055',
[2] 		3 'Erysiphe aphananthes ex_Aphananthe_aspera_MUMH4648',
[3] 		4 'Erysiphe kusanoi ex_Celtis_AB475120',
[4] 		5 'Erysiphe zelkowae ex_Zelkova_AB475121',
[5] 		6 'Erysiphe bivonae ex_Ulmus_AB475115',
[6] 		7 'Erysiphe bivonae ex_Ulmus_AB475116',
[7] 		8 'Erysiphe kenjiana ex_Ulmus_glable_AB475117',
[8] 		9 'Erysiphe kenjiana ex_Ulmus_minor_AB475118',
[9] 		10 'Erysiphe kenjiana ex_Ulmus_pumila_AB475119';
	TREE MajRule = (1:0.032737,(3:0.026367,(5:0.023411,(2:0.001891,4:0.003877):0.001267):0.010606,(6:0.009739,7:0.016264,8:0.0,9:0.0,10:0.0):0.011246):0.032737);

END;


BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED   =  unord:  1 -  555;

END;

BEGIN CODONS;
	CODESET * UNTITLED   =  universal:  1 -  555;


END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  'Jukes-Cantor':  1 -  555;
END;

Begin MESQUITE;
		MESQUITESCRIPTVERSION 2;
		TITLE AUTO;
		tell ProjectCoordinator;
		timeSaved 1506496813941;
		getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			setID 0 650655990728069037;
		endTell;
		getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters;
		tell It;
			setID 0 5219386453523081931;
			mqVersion 330;
			checksumv 0 3 621929436 null  getNumChars 555 numChars 555 getNumTaxa 10 numTaxa 10   short true   bits 15   states 15   sumSquaresStatesOnly 111149.0 sumSquares 111149.0 longCompressibleToShort false usingShortMatrix true   NumFiles 1 NumMatrices 1;
			mqVersion;
		endTell;
		getWindow;
		tell It;
			suppress;
			setResourcesState true false 180;
			setPopoutState 300;
			setExplanationSize 0;
			setAnnotationSize 0;
			setFontIncAnnot 0;
			setFontIncExp 0;
			setSize 700 464;
			setLocation 8 23;
			setFont SanSerif;
			setFontSize 10;
			getToolPalette;
			tell It;
			endTell;
			setActive;
			desuppress;
		endTell;
		getEmployee  #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord;
		tell It;
			showDataWindow #5219386453523081931 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker;
			tell It;
				getWindow;
				tell It;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 0 -72;
					setLocation 8 23;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
					setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow;
					colorCells  #mesquite.charMatrices.ColorByState.ColorByState;
				tell It;
					setStateLimit 9;
					toggleUniformMaximum on;
				endTell;
					colorRowNames  #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor;
					colorColumnNames  #mesquite.charMatrices.CharGroupColor.CharGroupColor;
					colorText  #mesquite.charMatrices.NoColor.NoColor;
					setBackground White;
					toggleShowNames on;
					toggleShowTaxonNames on;
					toggleTight off;
					toggleThinRows off;
					toggleShowChanges off;
					toggleSeparateLines off;
					toggleShowStates on;
					toggleAutoWCharNames off;
					toggleAutoTaxonNames off;
					toggleShowDefaultCharNames off;
					toggleConstrainCW on;
					toggleBirdsEye off;
					toggleShowPaleGrid off;
					toggleShowPaleCellColors off;
					toggleShowPaleExcluded off;
					togglePaleInapplicable on;
					toggleShowBoldCellText off;
					toggleAllowAutosize off;
					toggleColorsPanel off;
					toggleLinkedScrolling on;
					toggleScrollLinkedTables off;
				endTell;
				getWindow;
				tell It;
					forceAutosize;
				endTell;
				hideWindow;
				getEmployee #mesquite.charMatrices.AlterData.AlterData;
				tell It;
					toggleBySubmenus off;
				endTell;
				getEmployee #mesquite.charMatrices.ColorCells.ColorCells;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip;
				tell It;
					showStrip off;
				endTell;
				getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel;
				tell It;
					togglePanel off;
				endTell;
				getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip;
				tell It;
					showStrip off;
				endTell;
				getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector;
				tell It;
					autotabOff;
				endTell;
				getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip;
				tell It;
					showStrip off;
				endTell;
				getEmployee #mesquite.align.AlignToDropped.AlignToDropped;
				tell It;
					gapCosts 16 6 1 1;
					subCosts  10 5 10 10 10 5 5 10 10 10 5 10;
				endTell;
				getEmployee #mesquite.molec.ColorByAA.ColorByAA;
				tell It;
					emphasizeDegeneracy off;
				endTell;
				getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor;
				tell It;
					panelOpen false;
				endTell;
			endTell;
		endTell;
		endTell;
end;