#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=26; TAXLABELS fungal_endophyte_HQ335305 'Oomycete sp. BEA-2010 HM589307' Pythium_canariense_AY065618 Pythium_iwayamai_AB299388 Pythium_iwayamai_AB491614 Pythium_iwayamai_HQ643669 Pythium_nagaii_AY598705 Pythium_okanoganense_AB468817 Pythium_okanoganense_AY598649 Pythium_paddicum_AB468772 Pythium_paddicum_AY598707 Pythium_polaris_OPU1078_AB299389 Pythium_polaris_OPU1084_AB299390 Pythium_polaris_OPU1243_AB299391 Pythium_polaris_OPU1244_AB299392 Pythium_polaris_OPU1335_AB299393 Pythium_polaris_OPU1336_AB299394 Pythium_polaris_OPU1435_AB299395 'Pythium sp. PB-2007 AM489757' 'Pythium polaris Bi-7 JN383915' 'Pythium sp. WJB-1 FJ415946' Pythium_splendens_AY598655 Pythium_ultimum_var._ultimum_AY598657 Pythium_violae_AY598706 Pythium_violae_AY598715 uncultured_Pythium_AY129553 ; END; BEGIN CHARACTERS; TITLE Pythium_ITS; DIMENSIONS NCHAR=1035; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX fungal_endophyte_HQ335305 -----------------TTTCCACGTGAACTGTCTGACTT--AGTTTTGCGCT-GCTGCG---GGGTGTGTTTTGCGTGCTTGC--ACGGG--AAGCACTG----TCTGCGGCGGCTGAACGAAGGTTG----GTGTCGTG-TTGTCTGT-GCGCGCTT--------------------------------------------------GATTGCGTGCGGG----ACGTCCGTCGCCGGCTGACTTATTTTT-CAACCCC-ATTACCTAACA-ACTGAACTAT--ACTGTGAGAACGAAAGTTCTCGCTTTAAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTCC-TGTGTAGTCAGGGGAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---G?TTCTTGTGATGAGAAG---------CACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGG-GTTTGCGACGTGTGTTGGTCG-AACGCGGTGATTTTCGGATCGCTCGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTTGCTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTATGTGAGTGTGGATTCCGTGTTCGCCTTGAGGTGTACTGGCGGTCGTGGGCTTGACCTGTTTG--------TCGTTGTGTAGTAGGCTGTCGC-AT--TGTTTGCGGATTC-GTCTGTG-GCTGACACTTT--CTGGTGTTGGTT----GCGGGAGAATGATTG-ATTTGGGAAATG--TTGT---------------------------------------------------------------------------- 'Oomycete sp. BEA-2010 HM589307' ---CACACCTAAAA--ACTTTCACGTGAACTGTCTGACTT--AGTTTTGCGCT-GCTGCG---GGGTGTGTTTTGCGTGCTTGC--ACGGG--AGGCACTG----TCTGCGGCGGCTGAACGAAGGTTG----GTGTCGTG-TTGTCTGT-GCGCGCTT--------------------------------------------------GATTGCGTGCGGG----ACGTCCGTCGCCGGCTGACTTATTTTT-CAACCCC-ATTACCTAACA-ACTGAACTAT--ACTGTGAGAACGAAAGTTCTCGCTTTAAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTCC-TGTGTAGTCAGGGGAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GGTTCTTGTGATGAGGAG---------CACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGG-GTTTGCGACGTGTGTTGGTCG-AACGCGGTGATTTTCGGATCGCTCGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTTGCTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTATGTGAGTGTGGATTCCGTGTTCGCCTTGAGGTGTACTGGCGGTCGTGGGCTTGACCTGTTTG--------TCGTTGTGTAGTAGGCTGTCGC-AT--TGTTTGCGGATTC-GTCTGTG-GCTGACACTTT--CTGGTGTTGGTT----GCGGGAGAATGATTG-ATTTGGGAAATG--TTGTGTTTGC-TGTGCCTTTTT-GGGTCGGCCTACATCTCAATTGGACCTGATATCAGACAA------------------ Pythium_canariense_AY065618 CCACACCTAAAAAA--CTTTCCACGTGAACTGTCTTACTT--AGTTTTGCGCT-GCTGTC---GGGAGTGTTCTGCGTGCGCTTT-GCACGGAGAGCGTTT----CTTGCAACGGCTGAACGAAGGTTG-GTGGCGTGTTGTCTTTTCTTTGCGTGCTT--------------------------------------------------GATTGTATGCGGGA--GACGTACGCCGCCGGCTGACTTACTTTTTCAACCCC-ATTACGAAACAAACTGAAGTATATACTGTGAGAACGAAAGTTCTCGCTTTGAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTCC-TGTGTAGTCAGGGGAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCGG--TTTCTTGGTATTCTTTCCAA----GAGCACGGCGGTCGAGTCCTTTGAAAACGACACGATCTTTCTTATGAGTTTTGCGACGTGTGTTGGTCG-AACGCGGTGATTTTCGGATCGCTCGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTTGCTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTATGTGAGTGTGGAATCCGTGTTCGCCTCGAGGTGTACTGGCGGTCGTGAGCTTGACCTGTTTG--------TCGGTGTGTAGTAGGCTTGTGC-ATTGTTTTCGCGGACTC-GTCTGCG-ACTGACGCTTT--CGGGTGTTGGTGTATTGCAGGAGAGAGCTTG-ATTTGGGAAGTT--TTGTGTTTGTTGTTTGCCTTCG-GGTGGAATAAGCATCTCAATTGGACCTGATATCAGACAAGACTACCC---------- Pythium_iwayamai_AB299388 CCACACCTAAAAAA--CTTTCCACGTGAACTGTCTTACTT--AGTTTTGCGCT-GCTGCG-GTGGCGGTGTTCTGCGCACTTGT--GCGTG--GGACGCTGTTCATCTGCGGCGGCTAAACGAAGGTTGGTTGGAGTGTTG-TTGTGTGT-GCTTTCTT------------------------------------------------------GCGCGCCGT---CGTACGCTCTGCCGGCTGACTTATTTTTTCAACCCC--TTACTTTAAAAACTGAACTAT--ACTGTGAGAACGAAAGTTCTCGCTTTTAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCCTTTCTTTTTC-TGTGTAGTCAGGATTGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GTTTTTGGTGAAACAAAA--------GCACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGT-GTCTGCGGCGTGTGGCGCTCG-AACGCGGTGATTTTCGGATCGCTTGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTCGGTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGATGCTGTGTGTGGATTCCGTGTTTACCTTGAGGTGTACTGGCGGTTGCGGGCTTGACCCGGGTG--------TTGCTGTGTAGTAGAGTGTTGC-ATT-TTGTTGTGGACTC-GTCCGTG-GCTGGCGCCTTGATTGGTGTCGGTT----GTGGGAGAAGGGTTG-ATTTGGGAAATT--TTGTGTGCAC-TTTTGTGTACA-TCTCAA--------------------------------------------------- Pythium_iwayamai_AB491614 CCACACCTAAAAAA--CTTTCCACGTGAACTGTCTTACTT--AGTTTTGCGCT-GCTGCG-GTGGCGGTGTTCTGCGCACTTGT--GCGTG--GGACGCTGTTCATCTGCGGCGGCTAAACGAAGGTTGGTTGGAGTGTTG-TTGTGTGT-GCTTTCTT------------------------------------------------------GCGCGCCGT---CGTACGCTCTGCCGGCTGACTTATTTTTTCAACCCC--TTACTTTAAAAACTGAACTAT--ACTGTGAGAACGAAAGTTCTCGCTTTTAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCCTTTCTTTTTC-TGTGTAGTCAGGATTGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GTTTTTGGTGAAACAAAA--------GCACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGT-GTCTGCGGCGTGTGGCGCTCG-AACGCGGTGATTTTCGGATCGCTTGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTCGGTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGATGCTGTGTGTGGATTCCGTGTTTACCTTGAGGTGTACTGGCGGTTGCGGGCTTGACCCGGGTG--------TTGCTGTGTAGTAGAGTGTTGC-ATT-TTGTTGTGGACTC-GTCCGTG-GCTGGCGCCTTGATTGGTGTCGGTT----GTGGGAGAAGGGTTG-ATTTGGGAAATT--TTGTGTGCAC-TTTTGTGTACA-TCTCAA--------------------------------------------------- Pythium_iwayamai_HQ643669 CCACACCTAAAA----CTTTCCACGTGAACTGTCTTACTT--AGTTTTGCGCT-GCTGTC---GGGAGTGTTCTGCGTGCGCGCTTGCACGGAGAGCGTTT----CTTGCAACGGCTGAACGAAGGTTG-GTGGCGTCTTG--TCTTCTTTGCGTGCTT--------------------------------------------------GATTGTATGCGGGA--GACGTACGCCGCCGGCTGACTTACTCTTTCAACCCC-ATTACGAAACAAACTGAAGTAT--ACTGTGAGAACGAAAGTTCTCGCTTTGAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTCCCTGTGTAGTCAGGGGAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GTTTTTGGATATGTGTCTAA----AAGCACGATGGTCGAGTCCTTTGAAAACGACACGATCTTTCTTATGA-GTTTGCGACGTGTGTTGGTCG-AACGCGGTGATCTTCGGATCGCTCGTGGTCGTCGGCGACTTCGGTGAATGCATTATATGGAAGAAACCTTGCTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTATGTGGGTGTGACTTTCGCGTTCGCCTTGAGGTGTACTGGCGGTTGTGGGCTTGATCTGTTGG--------TTGTCGTGTAGTAGACTAGTGC-AT--TGTTTGTCGATTC-GTCTGCA-------------------ATTGCTT----GCAGGAGAATGATTG-ATTTGGGACATT--TTGTGTTTGTTTCCACTTTGCGGTGGGCGACATACATCTCAATTGGACCTGATATCAGACAAGACTACCCGCT------- Pythium_nagaii_AY598705 CCAGACCTAAAAAA--CTTTCCACGTGAACTGTCATGTAA--CGTTTCGTACTTGCTGTGTGTTGTGTCGATGTGCATTCATTT--GCGTG--TCG-GCTGCGCACTGGCA--GGTTGAACGAAGGTCGCATTGTGTACTT-GCCTGTGTCGCTCTTTTTTTGTTTCCTKTGTGTTGTATTTCGGTACAAGAGAGAGGAGAGAGAGAGAGAGTGCGCGCGGTGTGTGTGTGCGGTGTCGGCTGACCTATTTTTTCAAACCCAATTACCTCAAATACTGATCAAT--ACTGTGAGAACGAAAGTTCTTGCTTTAAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTTCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTTC-TGTGTAGTCAGTGAGAGAGAGTTGCAGATGTGAAGTGTCTCGGCCGTTGGCGTGTGTGTGTCGTGTGCTTTTGTTAGCACGTGGTGCGTCGCGCACTGTGGCCGAGTCCTTTTAAACGGACCCGATCTTTCTTATGT-TTCTGCGACGTGTGGCGCTCG-AACGCGGCGATTTTCGGATCGCTCGCAGTTGTCGGCGACTTCGGCGAAGACATTAC--GGAGGAAACCTCAATTCGCGGTATGTTAGGCTTCGGTCGGACAATGTTGCT-TATTGTGTGTGGAATCTGTTTTCGCCTTGAGGTGTACTGGCGGTTGTGGGCTTGTGTCTGTTGGTCGTTATTTTCCGTGTAGTAGAGAGCTGC-TTG-TGTGCGTGGATTCTGCCTGTC-TCAGTCAGTTCGCTGGCTGTGTGTG----GTAAAAGATAGATTGCATTTGGGAAATG--TTGTACTCTT-GGTTGTTTGTG-TCTCTGTAATGGAGCGCGGCGGCTTTTTGTATCTCAA-------------------- Pythium_okanoganense_AB468817 CCACACCTAAAAAA--CTTTCCACGTGAACTGTCTTACTT--AGTTTTGCGCT-TCTGCG---GGAGGTGTTCTGCGCACATGT--GCGTG--GGGCGT----CTTTTGCGGCGGCTAAACGAAGGTTG-GTTGAGTGTTG-TTGTGCGT-GCTTTATT------------------------------------------------------GCGCGCCGT---CGTACGCT-TGCCGGCTGACTTATTTTTTCAACCCCTTTTACTTAACA-ACTGAATTAT--ACTGTGAGAACGAAAGTTCTCGCTTTTAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCCTTTCTTTTCC-TGTGTAGTCAGGGAAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GTTTTTGGTAAAACAAAA--------GCACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGTGCTCTGCAGCGTGTGGCGCTCG-AACGCAGTGATTTTCGGATCGCTTGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTCGGTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTAATTGTGTGTGGATTCCGTGTTCTCCTTGAGGTGTACTGGCGGTTGCGGGCTTGAACCGGGTG--------TTGCTGTGTAGTAGAGAGTTGC-ATT-TTGTTGTGGACTC-GTCCGTGGCCGGCTTCCTTCATTGGTGTCGGTT----GTGGGAGAAGGATTG-ATTTGGGAAATT--TTGTGTGCAT-TATGTCATTTA-TGACTGGTGTACATCTCAA-------------------------------------- Pythium_okanoganense_AY598649 CCACACCTAAAAAA--CTTTCCACGTGAACTGTCTTACTT--AGTTTTGCGCT-GCTGCG---AGGGGTGTTCTGCGCACATGT--GCGTA--GGGCGT----CTTTTGCGGCGGCTAAACGAAGGTTG-GTTGAGTGTTG-TTGTGCGT-GCTTTATT------------------------------------------------------GCGCGCCGT---CGTACGCT-TGCCGGCTGACTTATTTTTTCAACCCCTTTTAACTTACA-ACTGAATTAT--ACTGTGAGAACGAAAGTTCTCGCTTTTAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCCTTTCTTTTCC-TGTGTAGTCAGGGGAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GTTTTTGGTGAAACAAAA--------GCACGACGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGTGCTCTGCAGCGTGTGGCGCTCG-AACGCGGTGATTTTCGGATCGCTTGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTCGGTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTTACTGGGTGTGGATTCCGTGTTCTCCTTGAGGTGTACTGGCGGTTGCGGGCTTGAACCGGGTG--------TTGCTGTGTAGTAGAGAGTTGC-ATT-TTGTTGTGGACTC-GTCCGTGGCCGGCTTCCTTGATTGGTGTCGGTT----GTGGGAGAAGGATTG-ATTTGGGAAATT--TTGTGTGCAT--GTGTCATTTC-TGGCTCGTGTACATCTCAA-------------------------------------- Pythium_paddicum_AB468772 CCACACCTAAAAAA--CTTTCCACGTGAACTGTCTTACTT--AGTTTTGCGCT-GCTGCG-GTAGCGGTGTTCTGCGCACTTGT--GCGTG--GTGCGCTGTTTATCTGCAGCGGCTAAACGAAGGTTGGTTGGAGTGTTG-TTGTGTGT-GCTTTCTT------------------------------------------------------GCGCGCCAT---CGTACGCTCTGCCGGCTGACTTATTTTTTCAACCCC--TTACTTTAAAAACTGAACTAT--ACTGTGAGAACGAAAGTTCTCGCTTTTAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCCTTTCTTTTTC-TGTGTAGTCAGGATTGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GTTTTTGGTAAAACAAAA--------GCACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGT-GTCTGCGGCGTGTGGCGCTCG-AACGCAGTGATTTTCGGATCGCTTGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTCGGTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGATGCTGTGTGTGGATTCCGTGTTGACCTTGAGGTGTACTGGCGGTTGCGGGCTTGACCCGGGTG--------TTGTTGTGTAGTAGAGTGTTGC-ATT-TTGTTGTGGACTC-GTCCGTG-ACTGGCGCCTTTGTTGGTGTCGGTT----GTGGGAGAAGGGTTG-ATTTGGGAAATT--TTGTGTGCAC-TTTTGTGTACA-TCTCAA--------------------------------------------------- Pythium_paddicum_AY598707 CCACACCTAAAAAA--CTTTCCACGTGAACTGTCTTACTT--AGTTTTGCGCT-GCTGCG-GTAGCGGTGTTCTGCGCACTTGT--GCGTG--GTGCGCTGTTTATCTGCAGCGGCTAAACGAAGGTTGGTTGGAGTGTTG-TTGTGTGT-GCTTTCTT------------------------------------------------------GCGCGCCAT---CGTACGCTCTGCCGGCTGACTTATTTTTTCAACCCC--TTACTTTAAAAACTGAACTAT--ACTGTGAGAACGAAAGTTCTCGCTTTTAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCCTTTCTTTTTC-TGTGTAGTCAGGATTGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GTTTTTGGTAAAACAAAA--------GCACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGT-GTCTGCGGCGTGTGGCGCTCG-AACGCAGTGATTTTCGGATCGCTTGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTCGGTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGATGCTGTGTGTGGATTCCGTGTTGACCTTGAGGTGTACTGGCGGTTGCGGGCTTGACCCGGGTG--------TTGTTGTGTAGTAGAGTGTTGC-ATT-TTGTTGTGGACTC-GTCCGTG-ACTGGCGCCTTTGTTGGTGTCGGTT----GTGGGAGAAGGGTTG-ATTTGGGAAATT--TTGTGTGCAC-TTTTGTGTACA-TCTCAA--------------------------------------------------- Pythium_polaris_OPU1078_AB299389 CCACACCTAAAAAA--CTTTCCACGTGAACTGTCTGACTT--AGTTTTGCGCT-GCTGCG---GGGTGTGTTTTGCGTGCTTGC--ACGGG--AAGCACTG----TCTGCGGCGGCTGAACGAAGGTTG----GTGTCGTG-TTGTCTGT-GCGCGCTT--------------------------------------------------GATTGCGTGCGGG----ACGTCCGTCGCCGGCTGACTTATTTTT-CAACCCC-ATTACCTAACA-ACTGAACTAT--ACTGTGAGAACGAAAGTTCTCGCTTTAAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTCC-TGTGTAGTCAGGGGAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GCTTCTTGTGATGAGAAG---------CACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGG-GTTTGCGACGTGTGTTGGTCG-AACGCGGTGATTTTCGGATCGCTCGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTTGCTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTATGTGAGTGTGGATTCCGTGTTCGCCTTGAGGTGTACTGGCGGTCGTGGGCTTGACCTGTTTG--------TCGTTGTGTAGTAGGCTGTCGC-AT--TGTTTGCGGATTC-GTCTGTG-GCTGACACTTT--CTGGTGTTGGTT----GCGGGAGAATGATTG-ATTTGGGAAATG--TTGTGTTTGC-TGTGCCTTTTT-GGGTCGGCCTACATCTCAA-------------------------------------- Pythium_polaris_OPU1084_AB299390 CCACACCTAAAAAA--CTTTCCACGTGAACTGTCTGACTT--AGTTTTGCGCT-GCTGCG---GGGTGTGTTTTGCGTGCTTGC--ACGGG--AAGCACTG----TCTGCGGCGGCTGAACGAAGGTTG----GTGTCGTG-TTGTCTGT-GCGCGCTT--------------------------------------------------GATTGCGTGCGGG----ACGTCCGTCGCCGGCTGACTTATTTTT-CAACCCC-ATTACCTAACA-ACTGAACTAT--ACTGTGAGAACGAAAGTTCTCGCTTTAAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTCC-TGTGTAGTCAGGGGAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GCTTCTTGTGATGAGAAG---------CACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGG-GTTTGCGACGTGTGTTGGTCG-AACGCGGTGATTTTCGGATCGCTCGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTTGCTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTATGTGAGTGTGGATTCCGTGTTCGCCTTGAGGTGTACTGGCGGTCGTGGGCTTGACCTGTTTG--------TCGTTGTGTAGTAGGCTGTCGC-AT--TGTTTGCGGATTC-GTCTGTG-GCTGACACTTT--CTGGTGTTGGTT----GCGGGAGAATGATTG-ATTTGGGAAATG--TTGTGTTTGC-TGTGCCTTTTT-GGGTCGGCCTACATCTCAA-------------------------------------- Pythium_polaris_OPU1243_AB299391 CCACACCTAAAAAA--CTTTCCACGTGAACTGTCTGACTT--AGTTTTGCGCT-GCTGCG---GGGTGTGTTTTGCGTGCTTGC--ACGGG--AGGCACTG----TCTGCGGCGGCTGAACGAAGGTTG----GTGTCGTG-TTGTCTGT-GCGCGCTT--------------------------------------------------GATTGCGTGCGGG----ACGTCCGTCGCCGGCTGACTTATTTTT-CAACCCC-ATTACCTAACA-ACTGAACTAT--ACTGTGAGAACGAAAGTTCTCGCTTTAAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTCC-TGTGTAGTCAGGGGAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GCTTCTTGTGATGAGAAG---------CACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGG-GTTTGCGACGTGTGTTGGTCG-AACGCGGTGATTTTCGGATCGCTCGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTTGCTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTATGTGAGTGTGGATTCCGTGTTCGCCTTGAGGTGTACTGGCGGTCGTGGGCTTGACCTGTTTG--------TCGTTGTGTAGTAGGCTGTCGC-AT--TGTTTGCGGATTC-GTCTGTG-GCTGACACTTT--CTGGTGTTGGTT----GCGGGAGAATGATTG-ATTTGGGAAATG--TTGTGTTTGC-TGTGCCTTTTT-GGGTCGGCCTACATCTCAA-------------------------------------- Pythium_polaris_OPU1244_AB299392 CCACACCTAAAAAA--CTTTCCACGTGAACTGTCTGACTT--AGTTTTGCGCT-GCTGCG---GGGTGTGTTTTGCGTGCTTGC--ACGGG--AGGCACTG----TCTGCGGCGGCTGAACGAAGGTTG----GTGTCGTG-TTGTCTGT-GCGCGCTT--------------------------------------------------GATTGCGTGCGGG----ACGTCCGTCGCCGGCTGACTTATTTTT-CAACCCC-ATTACCTAACA-ACTGAACTAT--ACTGTGAGAACGAAAGTTCTCGCTTTAAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTCC-TGTGTAGTCAGGGGAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GCTTCTTGTGATGAGAAG---------CACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGG-GTTTGCGACGTGTGTTGGTCG-AACGCGGTGATTTTCGGATCGCTCGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTTGCTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTATGTGAGTGTGGATTCCGTGTTCGCCTTGAGGTGTACTGGCGGTCGTGGGCTTGACCTGTTTG--------TCGTTGTGTAGTAGGCTGTCGC-AT--TGTTTGCGGATTC-GTCTGTG-GCTGACACTTT--CTGGTGTTGGTT----GCGGGAGAATGATTG-ATTTGGGAAATG--TTGTGTTTGC-TGTGCCTTTTT-GGGTCGGCCTACATCTCAA-------------------------------------- Pythium_polaris_OPU1335_AB299393 CCACACCTAAAAAA--CTTTCCACGTGAACTGTCTGACTT--AGTTTTGCGCT-GCTGCG---GGGTGTGTTTTGCGTGCTTGC--ACGGG--AGGCACTG----TCTGCGGCGGCTGAACGAAGGTTG----GTGTCGTG-TTGTCTGT-GCGCGCTT--------------------------------------------------GATTGCGTGCGGG----ACGTCCGTCGCCGGCTGACTTATTTTT-CAACCCC-ATTACCTAACA-ACTGAACTAT--ACTGTGAGAACGAAAGTTCTCGCTTTAAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTCC-TGTGTAGTCAGGGGAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GCTTCTTGTGATGAGAAG---------CACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGG-GTTTGCGACGTGTGTTGGTCG-AACGCGGTGATTTTCGGATCGCTCGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTTGCTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTATGTGAGTGTGGATTCCGTGTTCGCCTTGAGGTGTACTGGCGGTCGTGGGCTTGACCTGTTTG--------TCGTTGTGTAGTAGGCTGTCGC-AT--TGTTTGCGGATTC-GTCTGTG-GCTGACACTTT--CTGGTGTTGGTT----GCGGGAGAATGATTG-ATTTGGGAAATG--TTGTGTTTGC-TGTGCCTTTTT-GGGTCGGCCTACATCTCAA-------------------------------------- Pythium_polaris_OPU1336_AB299394 CCACACCTAAAAAA--CTTTCCACGTGAACTGTCTGACTT--AGTTTTGCGCT-GCTGCG---GGGTGTGTTTTGCGTGCTTGC--ACGGG--AAGCACTG----TCTGCGGCGGCTGAACGAAGGTTG----GTGTCGTG-TTGTCTGT-GCGCGCTT--------------------------------------------------GATTGCGTGCGGG----ACGTCCGTCGCCGGCTGACTTATTTTT-CAACCCC-ATTACCTAACA-ACTGAACTAT--ACTGTGAGAACGAAAGTTCTCGCTTTAAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTCC-TGTGTAGTCAGGGGAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GCTTCTTGTGATGAGAAG---------CACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGG-GTTTGCGACGTGTGTTGGTCG-AACGCGGTGATTTTCGGATCGCTCGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTTGCTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTATGTGAGTGTGGATTCCGTGTTCGCCTTGAGGTGTACTGGCGGTCGTGGGCTTGACCTGTTTG--------TCGTTGTGTAGTAGGCTGTCGC-AT--TGTTTGCGGATTC-GTCTGTG-GCTGACACTTT--CTGGTGTTGGTT----GCGGGAGAATGATTG-ATTTGGGAAATG--TTGTGTTTGC-TGTGCCTTTTT-GGGTCGGCCTACATCTCAA-------------------------------------- Pythium_polaris_OPU1435_AB299395 CCACACCTAAAAAA--CTTTCCACGTGAACTGTCTGACTT--AGTTTTGCGCT-GCTGCG---GGGTGTGTTTTGCGTGCTTGC--ACGGG--AGGCACTG----TCTGCGGCGGCTGAACGAAGGTTG----GTGTCGTG-TTGTCTGT-GCGCGCTT--------------------------------------------------GATTGCGTGCGGG----ACGTCCGTCGCCGGCTGACTTATTTTT-CAACCCC-ATTACCTAACA-ACTGAACTAT--ACTGTGAGAACGAAAGTTCTCGCTTTAAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTCC-TGTGTAGTCAGGGGAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GCTTCTTGTGATGAGAAG---------CACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGG-GTTTGCGACGTGTGTTGGTCG-AACGCGGTGATTTTCGGATCGCTCGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTTGCTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTATGTGAGTGTGGATTCCGTGTTCGCCTTGAGGTGTACTGGCGGTCGTGGGCTTGACCTGTTTG--------TCGTTGTGTAGTAGGCTGTCGC-AT--TGTTTGCGGATTC-GTCTGTG-GCTGACACTTT--CTGGTGTTGGTT----GCGGGAGAATGATTG-ATTTGGGAAATG--TTGTGTTTGC-TGTGCCTTTTT-GGGTCGGCCTACATCTCAA-------------------------------------- 'Pythium sp. PB-2007 AM489757' ----------------------------------------------------------------GGTGTGTTTTGCGTGCTTGC--ACGGGG-AGGCACTG----TCTGCGGCGGCTGAACGAAGGTTG----GTGTCGTG-TTGTCTGT-GCGCGCTT--------------------------------------------------GATTGCGTGCGGG----ACGTCCGTCGCCGGCTGACTTATTTTT-CAACCCCCATTACCTAACA-ACTGAACTAT--ACTGTGAGAACGAAAGTTCTCGCTTTAAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTCC-TGTGTAGTCAGGGGAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GCTTCTTGTGATGAGGAG---------CACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGG-GTTTGCGACGTGTGTTGGTCG-AACGCGGTGATTTTCGGATCGCTCGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTTGCTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTATGTGAGTGTGGATTCCGTGTTCGCCTTGAGGTGTACTGGCGGTCGTGGGCTTGACCTGTTTG--------TCGTTGTGTA??A?GCTGTC?C-AT--TGTTTGCGGATTC-?TCTGTG-GCTGACACTTT--CTGGTGTTGGTT----GC------------------------------------------------------------------------------------------------------------ 'Pythium polaris Bi-7 JN383915' ------------AA--CTTTCCACGTGAACTGTCTGACTT--AGTTTTGCGCT-GCTGCG---GGGTGTGTTTTGCGTGCTTGC--ACGGG--AGGCACTG----TCTGCGGCGGCTGAACGAAGGTTG----GTGTCGTG-TTGTCTGT-GCGCGCTT--------------------------------------------------GATTGCGTGCGGG----ACGTCCGTCGCCGGCTGACTTATTTTT-CAACCCC-ATTACCTAACA-ACTGAACTAT--ACTGTGAGAACGAAAGTTCTCGCTTTAAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTCC-TGTGTAGTCAGGGGAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GCTTCTTGTGATGAGAAG---------CACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGG-GTTTGCGACGTGTGTTGGTCG-AACGCGGTGATTTTCGGATCGCTCGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTTGCTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTATGTGAGTGTGGATTCCGTGTTCGCCTTGAGGTGTACTGGCGGTCGTGGGCTTGACCTGTTTG--------TCGTTGTGTAGTAGGCTGTCGC-AT--TGTT------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Pythium sp. WJB-1 FJ415946' CCACACCTAAAAAA--CTTTCCACGTGAACTGTCTTACTT--AGTTTTGCGCT-GCTGCA-----GAGTATTCTGTGCTCTTTT--GAGTATAGAGTAT------ACTGTAGTGGCTGAACGAAGGTTG-GTTGAGTGTTGTCTCTATGT-GCTTGATT------------------------------------------------------GCATGTGGG----ACGTACGCCACCAGCTGACTTATTTTTTCAACCCC--TTACATAAACAACTGAAAAAT--ACTGTGAGAACGAAAGTTCTTGCTTTAAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTTCGGGTTATACCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTCC-TGTGTAGTCAGGGAAAGAGA-CGGCTGATGTGAAGTGTCTCG------------CGTGCGTCG---GTTTTTGGTATTTCTAAA-------AGCACGGCGGTCGAGTCCTTTGAAAACGACACGATCTTTCTTATGA-GTTTACGACGTGTGTTGGTCG-AACGCGGTGATTTTCGGATCGCTCGTGGTCGTCGGCGACTTCGGTGAATACATTAT--GGAAGAAACCTTGCTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTATGTGAGTGTGGATTTCGTATTCGCCTTGAGGTGTACTGGCGGTTGTGGGCTTGATCTGTTGA--------TTGTCGTGTAGTAGATGAATGC-AA--TGTTTGTGAATTC-GTCTACA-AGTGATACACTTTTGTGTATTGGTT----GTAGGAGAGTGATTG-ATTTGGGAAATA--TTGTGTTTGT---TTGCCTTTG-TGTAAATAA-ACATCTCAA-------------------------------------- Pythium_splendens_AY598655 CCACACTTTAAAA---CTGTCCACGTGAACTGT-AAGCAA---GTCTAGCGCT-GTGACT---GA---TCTGGTGTTTTC------GGATA--CTGGATCG-----GGAGTCAGCAGGA-CGAAGGTTG------GTCT----CGT---------AAT-------------------------------------------------------GTAAATTAT----G--GGACTAGCTGATGCATTCCT-TTTTCAAACCC--TTACCTAAAT-ACTGATTGAT--ACTGTGGGGACGAAAGTCCTTGCTTTTA-CTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTTCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAAMTTGCCTTTCTTTTTC-TGTGTAGTCAGRGAGAGAGACGTGCAGATGTGAAGTGTCTCG------------CATGGTT-----GCGTT------TTCGGA--------CGACGATCTGTCGAGTCCTTTTAAATGGACAGGGTCTTT-CTATGGTCTGTGTGAAGTGTGGTGCTCGAAAGGCAGTGATTTTCGGATCGCTGGCGGCTTTTGGCGACTTCGGCATGAACAT-AT--GGAGACTACCTCGGTTCGCGGTATGTTAGGCTTCGGCTGAACAATGTTGCGTAATTGAGTGTGGAATCCGTTTGTGCCTTGAGGTGTACYRTAGGTTGTCGGCTTGARCTGTGGA--------TCRTTGTTTAGTAGGGTATTTTCACGATGTACGGAGACGCTGC---AT--------------------TTAGTTG--CGTAGAGAGA---TTT-ATTTGGGAAATT--CTGTATCGTTGATGATCGAATGATTGTCGGTG-GTATCTCAA-------------------------------------- Pythium_ultimum_var._ultimum_AY598657 CCACACTTTAAAAA-ACTGTCCACGTGAACTGT-AAGCAA---GTCTAGCGCT-GTGACT---GA---GCTGGTGTTTTCATTTTTGGACA--CTGGAACG-----GGAGTCAGCAGGA-CGAAGGTTG------GTCTGT--TGT---------AAT-------------------------------------------------------GCAAGTTAT----GATGGACTAGCTGATGAACTTTTGTTTTTAAACCC--TTACCTAAAT-ACTGATTTAT--ACTGTGGGGACGAAAGTCCTTGCTTTTA-CTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTTCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCCTTTCTTTTTC-TGTGTAGTCAGGGATGGA-ATGTGCAGATGTGAAGTGTCTCG------------CATGGTT-----GCGTTCGTTTTTTCGAT--------CGAGAATCTGTCGAGTCCTTTTAAATGGACACGGTCTTTTCTATGGTTTCTATGAAGTGTAATGGTTGGAAGGCAGTGATTTTCGGATTGCTGGCGGCTTTTGGCGACTTCGGTATGAACGT-AT--GGAGACTAGCTCAATTCGTGGTATGTTAGGCTTCGGCTCGACAATGTTGCGTAATTGTGTGTGGTCTTTGTTTGTGCCTTGAGGTGTACTAGAGGTTGTCGGTTTGAACCGTAAG--------TGATTGTTTAGTAGAGCATTTTCACGATGTATGGAGACGCTGC---AT--------------------TTAGTTG--CGTAGAGAGA---TTG-ATTTGGGAAATT--TTGTATCATTGTCAATTGCAAGATTGTGTATG-GTATCTCAA-------------------------------------- Pythium_violae_AY598706 CCACACCTAAAAAATACTTTCCACGTGAACTGTCTTACTT--AGTTTTGCGCT-GCTGTC---GGGAGTGTTCTGCGCGCGCTT--GCACGGAGAGCGTTT----CTTGCAACGGCTGAACGAAGGTTG-GTTGAGTGTG--TTGTCTTTTGCGTGCTT--------------------------------------------------GATTGTATGCGGGG--GACGTACGCCGCCGGCTGACTTACTTTTTCAACCCC-ATTACGAAACAAACTGAAGTAT--ACTGTGAGAACGAAAGTTCTCGCTTTGAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAAATGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTCC-TGTGTAGTCAGGGGAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCGG--TTTCTTGGTATTGTTTCCAA----GAGCACGGCGGTCGAGTCCTTTGAAAACGACACGATCTTTCTTATGGGTTTTGCGACGTGTGTTGGTCG-AACGCGGTGATTTTCGGATCGCTCGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTTGCTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTATGTGGGTGTGGCTTCCGTGTTCGCCTCGAGGTGTACTGGCGGTCGTGGGCTTGACCTGTTTG--------TGGCTGTGTAGTAGGCTAGTGC-ATTGTTT-CGCGGATCC-GTCTGCG-ACTGACGCTTT--CGGGTGTTGGTG--TTGTAGGAGAAAGATTG-ATTTGGGAAGTA--TTGTGTTTGC-GTTTGCCTTCG-GGCG-AGTAAGCATCTCAA-------------------------------------- Pythium_violae_AY598715 CCACACCTAAAAA---CTTTCCACGTGAACCGTCAAGTAATAGATTCAGTGCC-TCTGCT---GTGGCTGTGGTGTTTTC------GGACG--CTGCGCTG-----TGGCGGAGGAGGAACGAAGGTTG------GTCTTG--TGTGTGCACAGCAAT-------------------------------------------------------GTGTGT-GT----GCGGGACTGGCTGATCTATTTTT--TTCAAACCCC--ATACAAAATG-ACTGATTTAT--ACTGTGAGAACGAAAGTTCTTGCTTTTAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTCGTCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCCTTTCTTTTTC-TGTGTAGTCAGGAGAAGATGAGTGCAGATGTGAAGTGTCTCG------------CTGGCCT-----ACTTCTCTCTTTGGGGAG-------TGGACAGGTATCGAGTCCTTTTAAAACGACACGATCTTT-CTACTGTTACTGAGAAGTGCGACGCTCG-AATGCGGTGGTCTTCGGATCGCGTGCAGTTGTCGGGGTCCTCGGCGTGAACAT-AT--GGAGGAAGCCTCGATTCGCGGTATGTTATGCTTCGGCTGTACAATGTTGCGTGATTGGGAGTGGAATTCGTTTGTGCCTTGAGGTGTACTGACGGTTGTGTGCTTGAACTGGAGG--------TTGTTGTGTAGTAGAGTGTTGT-GTGATGTACAGCGACGCCACTTCAT--------------------TTTGTTG--TGGGTAGAGGACGTCT-ATTTGGGAAAGAAGTAGTATCGGCAGCTTTTG-GTAGTTGAAGGTA-GTATCTCAATTGGACCTGATATCAGACAAGACTACCCGCTGAACTTA uncultured_Pythium_AY129553 CCACACCTAAAAAA--CTTTCCACGTGAACTGTCTGACTT--AGTTTTGCGCT-GCTGCG---GGGTGTGTTTTGCGTGCTTGC--ACGGG--AGGCACTG----TCTGCGGCGGCTGAACGAAGGTTG----GTGTCGTG-TTGTCTGT-GCGCGCTT--------------------------------------------------GATTGCGTGCGGG----ACGTCCGTCGCCGGCTGACTTATTTTT-CAACCCC-ATTACCTAACA-ACTGAACTAT--ACTGTGAGAACGAAAGTTCTCGCTTTAAACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTTTCC-TGTGTAGTCAGGGGAGGAGA-CGGCCGATGTGAAGTGTCTCG------------CGTGCGTCG---GCTTCTTGTGATGAGAAG---------CACGGCGGTCGAGTCCTTTTAAAACGACACGATCTTTCTTATGG-GTTTGCGACGTGTGTTGGTCG-AACGCGGTGATTTTCGGATCGCTCGTGGTCGTCGGCGACTTCGGTGAATGCATTAT--GGAGGAAACCTTGCTTCGCGGTACGTTAGGCTTCGGCTGGACAATGTTGCGTATGTGAGTGTGGATTCCGTGTTCGCCTTGAGGTGTACTGGCGGTCGTGGGCTTGACCTGTTTG--------TCGTTGTGTAGTAGGCTGTCGC-AT--TGTTTGCGGATTC-GTCTGTG-GCTGACACTTT--CTGGTGTTGGTT----GCGGGAGAATGATTG-ATTTGGGAAATG--TTGTGTTTGC-TGTGCCTTTTT-GGGTCGGCCTACATCTCAA-------------------------------------- ; END; BEGIN TREES; Title Pythium_ITS_Result; LINK Taxa = Taxa; TRANSLATE 1 fungal_endophyte_HQ335305, 2 'Oomycete sp. BEA-2010 HM589307', 3 Pythium_canariense_AY065618, 4 Pythium_iwayamai_AB299388, 5 Pythium_iwayamai_AB491614, 6 Pythium_iwayamai_HQ643669, 7 Pythium_nagaii_AY598705, 8 Pythium_okanoganense_AB468817, 9 Pythium_okanoganense_AY598649, 10 Pythium_paddicum_AB468772, 11 Pythium_paddicum_AY598707, 12 Pythium_polaris_OPU1078_AB299389, 13 Pythium_polaris_OPU1084_AB299390, 14 Pythium_polaris_OPU1243_AB299391, 15 Pythium_polaris_OPU1244_AB299392, 16 Pythium_polaris_OPU1335_AB299393, 17 Pythium_polaris_OPU1336_AB299394, 18 Pythium_polaris_OPU1435_AB299395, 19 'Pythium sp. PB-2007 AM489757', 20 'Pythium polaris Bi-7 JN383915', 21 'Pythium sp. WJB-1 FJ415946', 22 Pythium_splendens_AY598655, 23 Pythium_ultimum_var._ultimum_AY598657, 24 Pythium_violae_AY598706, 25 Pythium_violae_AY598715, 26 uncultured_Pythium_AY129553; TREE Imported_tree_0 = (((((((((((16:0.0,18:0.0)0.9999:0.0,15:0.0)0.9999:0.0,14:0.0)0.9999:0.0,26:0.0)0.7108:5.0628E-4,(12:0.0,(13:0.0,17:0.0)0.9999:0.0)0.7108:6.5381E-4)0.9982:0.00290881,(2:0.00834142,19:-0.00698272)0.7924:0.00224126)0.9998:0.00353152,1:-0.00550876)0.9998:0.0051705,20:-0.00970415)0.9998:0.03239679,(21:0.06416107,(6:0.03802558,(3:0.01793462,24:0.01388356)0.9998:0.02186744)0.9958:0.01453366)0.9832:0.00945733)0.9998:0.02000449,((8:0.01056917,9:0.01132023)0.9998:0.01915062,((4:0.0,5:0.0)0.9978:0.00596215,(11:0.0,10:0.0)0.9986:0.00913658)0.9998:0.02313096)0.9998:0.03344757)0.9998:0.03372206,7:0.10709154,(25:0.09988112,(23:0.05000935,22:0.03009077)0.9998:0.06807021)0.9998:0.04640821); END;