NEXUS
[File created by TreeBASE:  7/26/07  21:05:54]
[Matrix accession#: M1975]

BEGIN TAXA;
	TITLE M1975;
	DIMENSIONS  NTAX=24;
	TAXLABELS
		Phaeosphaeria_nodorum	Phaeosphaeria_vagans	Coniothyrium_palmarum	Sydowia_polyspora	Hormonema_dematioides	Aureobasidium_pullulans	Hormonema_macrosporum	Kabatina_juniperi	Coniothyrium_leucospermi	Kabatina_thujae	Dothidea_insculpta	Diaporthe_phaseolorum_AF001016	Diaporthe_meridionalis	Diaporthe_phaseolorum_AF001028	Diaporthe_helianthi	Endothia_gyrosa_AF368324	Endothia_gyrosa_AF368326	Cryphonectria_macrospora	Cryphonectria_parasitica	Cryphonectria_cubensis_AF265654	Cryphonectria_cubensis_AF265657	Prosopidicola_mexicana_CBS_113530	Prosopidicola_mexicana_CBS_113529	Leucostoma_persoonii
	;
END;

BEGIN CHARACTERS;
	TITLE M1975;
	DIMENSIONS NCHAR=662;
	FORMAT DATATYPE = DNA MISSING = ? GAP = - ;
	MATRIX
		Phaeosphaeria_nodorum                   -----CATTACACT-CAG-TAGTTT--ACTACTGTAA--------AAGGG----GCTGT---TAG-----TC-TGT--------------ATAGCG-CAA-GCTGAT-------GA-GCAGCTGGCCTCTT---TT------------ATCCACCCTTGTC---TTTTGCGTAC--CCAC---GTTTCCTCGGCAGGCTTGCCTGCCGGTTGGACAAA-TTTATAAC-CT-TTTT----AATT--T-TC-AATCAGCGTCTGAA-----AAAC----TTAA-T-AATTACAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACC-CTCAAGC-----TCTGCTTGGTGTT-GGGTGTTTGTCCT----CTCCCTAGT-GTTTG--GACTCGCCTTAAAATAATTGGCAGCCAGTGTTTTGGTATTGAAGC-GCAGCA---------------CAAGTCGCGATTCGTAAC----AAACACTTGCG---TCCAC-AAG-CCTTTT-T-----AACT--TTTGACCTCGGATCAGG
		Phaeosphaeria_vagans                    -----CATTACATT-CAG-TAGCTT--GCTACTGGTCG------GGAGGC----GCTGT---AAC-----TC-CGC--------------ATAGTATTAATT-TACT-------GA-TGAGCGGCAGGCCCTCTGT------------CTGTACCCTTGTC---TTTTGCGCAC--TCAT---GTTTCCTCGGCGGGCTTGCCCGCCGATTGGACAAA-ACTATAAC-CT-TTTT----AATT--T-TC-AATCAGCGTCTGAAA----AAAC----TTAA-T-AATTACAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACC-CTCAAGC-----TCTGCTTGGTGTT-GGGTGTTTGTCCT----CTCCTTTGC-GTTTG--GACTCGCCTTAAAGCAATTGGCAGCCAGTGTTTTGGTATTGAAGC-GCAGCA---------------CATTTTGCGATTCTAGCC--GATAATACTTGCG---TCCAT-AAG-CCTTTT-TT----AACT--TTTGACCTCGGATCAGG
		Coniothyrium_palmarum                   AGGATCATTA-ACTATATCTCGGGGGGCCGGACCC--AAGGTG-CGAGCGTACACGGCGTTTAACC----AC-GCT--------------GTGGCATTCGACATTTT-------GA--CCCGCCCTGTCT----GAAT----------ATATACCCCTGTT---TATTGCGTAC-TACTT---GTTTCCTTGGTGGGCTTGCCCGCCAAAAGGAC-ACCTATAAAAC-CT-CTTGT---AAT---T-GC-AGTCAGCGTCAGAA-----AAAC----TTAA-T-AATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACC-CTCAAGC-----TTTGCTTGGTGTT-GGGTGTTTGTCCC----GT-GTTA-T-GCGTG--GACTCGCCTTAAAGCGATTGGCAGCCGGCATATTGGCCGTGGAGCAGCAGTA---------------CATTCAGCTCTCTACACC---ATAAAGTTGGCA---TCCATCAAGTCTATAC-ATT---TGCT--CTTGACCTCGGATCAGG
		Sydowia_polyspora                       ---ATCATTAAA---GAGATAGGGTCTTCAT-GGCCCGA-CCTCCAACCCTC-TGTTGTTAAAACT----ACCTT---------------GTTGCTTTGGCGG-GACCGTCTCGGT-CTCCGA----GCGC-----------------ACTAACCCT------------------------CGG--GT--TGGT--GAGCGCCCGCCAGA-GTCCAACC----AAACTCT-TGTA-TTAAACCAGT----CGTCTGAGTA-TAA-----AATT---TTAAT-TAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTAC-ACCACTCAAGC-----ATCGCTTGGTATT-GGGAA-CGGTCC-----GTCG-CAAG-GCGGG--CCTTCCTCGAAGA-CCTC-GGCGGGGTT-CAA-CCAACTTCGGGC-GTAGTAGAGTT-------AAATC-GAACGTCTT-ATAAGC-TTGGTCGGATCTCATTGCCGTCAAA-CCTTTAAATT---TTCTAGGTTGACC----------
		Hormonema_dematioides                   AGGATCATTAAA---GAGATAGGGTCTTCAT-GGCCCGA-CCTCCAACCCTC-TGTTGTTAAAACT----ACCTT---------------GTTGCTTTGGCGG-GACCGTCTCGGT-CTCCGA----GCGC-----------------ACTAACCCT------------------------CGG--GT--TGGT--GAGCGCCCGCCAGA-GTCCAACC----AAACTCT-TGTA-TTAAACCAGT----CGTCTGAGTA-TAA-----AATT---TTAAT-TAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTAC-ACCACTCAAGC-----ATCGCTTGGTATT-GGGAA-CGGTCC-----GTCG-CAAG-GCGGG--CCTTCCTCGAAGA-CCTC-GGCGGGGTTCCAA-CCAACTTCGGGC-GTAGTAGAGTT-------AAATC-GAACGTCTT-ATAAGC-TTGGTCGGATCTCATTGCCGTTAAA-CCTTTAAATT---TTCTAGGTTGACCTCGGATCAGG
		Aureobasidium_pullulans                 --------------------AGGGTCTTCAT-GGCCCGA-CCTCCAACCCTC-TGTTGTTAAAACT----ACCTT---------------GTTGCTTTGGCGG-GACCGTTTCGGT-CTCCGA----GCGC-----------------ACTAACCCT------------------------CGG--GT--TGGT--GAGCGCCCGCCAGA-GTCCAACC----AAACTCT-TGTA-TTAAACCAGT----CGTCTGAGTA-TAA-----AATT---TTAAT-TAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTAC-ACCACTCAAGC-----ATCGCTTGGTATT-GGGAA-CGGTCC-----GTCG-AAAG-GCGGG--CCTTCCTCGAAGA-CCTC-GGCGGGGTT-CAA-CCAACTTCGGGC-GTAGTAGAGTT-------AAATC-GAACGTCTT-ATAAGC-TTGGTCGGATCTCATTGCCGTTAAA-CCTTTATATT---TTCTAGGTTGACCTCGGATCANG
		Hormonema_macrosporum                   ---ATCATTAAA---GAGATAGGGTCTTCAC-GGCCCGA-CCTCCAACCCTC-TGTTGTTAAAACT----ACCTT---------------GTTGCTTTGGCGG-GACCGTCTCGGT-CTCCGA----GCGC-----------------ACTAACCCT------------------------CGG--GT--TGGT--GAGCGCCCGCCAGA-GTCCAACC----AAACTCT-TGTA-TTAAACCAGT----CGTCTGAGTA-TAA-----AATT---TTAAT-TAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTAC-ACCACTCAAGC-----ATCGCTTGGTATT-GGGAA-CGGTCC-----GTCG-AAAG-GCGGG--CCTTCCTCGAAGA-CCTC-GGCGGGGTT-CAA-CCAACTTCGGGC-GTAGTAGAGTT-------AAATC-GAACGTCTT-ACAAGC-TTGGTCGGATCTCATTGCCGTTAAA-CCTTTAAATT---TTCTAGGTTGACC----------
		Kabatina_juniperi                       -----CATTAAA---GAGTTAGGGTCCTAGT-GGCCCAA-CCTCCAACCCTC-TGTTGTTAAAACT----ACCTT---------------GTTGCTTTGGCGG-GACCGT-TCGGT-CTCCGA----GCGC-----------------GTTAACCTT------------------------CGG--GT--TGGC--GAGCGCCCGCCAGA-GTCCAACC----AAACTCT-TGTA-TTAAACCAGT----CGTCTGAGTA-TAA-----AATT---TTAAT-TAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTAC-ACCACTCAAGC-----ACTGCTTGGTATT-GGGCA-TCGTCC-----GTCG-AAAG-GCGGG--CGTGCCTCGAAGAACCTC-GGCGGGGTTTTT--CCAACTTCGGGC-GTAGTAAAGTT-------AAATCAAAACGTCTT-ATAAGC-TTGGTGAGATCTCATTGCCGTTAAA-CCTTTT-ATTT--TTC-AGGTTGACCTCGGAT----
		Coniothyrium_leucospermi                AGGATCATTAAA---GAGTTAGGGTCCTAGT-GGCCCAA-CCTCCAACCCTC-TGTTGTTAAAACT----ACCTT---------------GTTGCTTTGGCGG-GACCGT-TCGGT-CTCCGA----GCGC-----------------GTTAACCTC------------------------CGG--GT--TGGC--GAGCGCCCGCCAGA-GTCCAACC----AAACTCT-TGTA-TTAAACCAGT----CGTCTGAGTA-TAA-----AATT---TTAAT-TAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTAC-ACCACTCAAGC-----ACTGCTTGGTGTT-GGGCA-TCGTCC-----GTCG-AAAG-GCGGG--CGTGCCTCGAAGA-CCTC-GGCGGGGTTTCT--TCAACTTCGGGC-GTAGTAGAGTT-------AAATC-AAACGTCTT-ATAAGC-TTGGTGAGATCTCATTGCCGTTAAA-CCTTTT-AT----TTC-AGGTTGACCTCGGATCAGG
		Kabatina_thujae                         -----CATTAAA---GAGATAGGGTCCTAGT-GGCCCAA-CCTCCAACCCTC-TGTTGTTATAACT----ACCTT---------------GTTGCTTTGGCGG-GACCGT-TCGGT-CTCCGA----GCGC-----------------ACCAGTCTT------------------------CGG--AC--AGGT--GAGCGCCCGCCGGA-GTCCAACC----AAACTCT-TGTTTTTAAACCAGT----CGTCTGAGTA-TAA-----AATT---TTAAT-TAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTAC-ACCACTCAAGC-----ACTGCTTGGTATT-GGGCACTCGTCC-----GCCG-CAAG-GCGGG--CGTGCCTCGAAGA-CCTC-GGCGGGGTTTCA--TCAACTTCGGGC-GTAGTAGAGTT-------AAATC-GAACGTCTT-ATAAGC-TTGGTGAGATCTCATTGCCGTTAAA-CCCTTTTATTT--TTC-AGGTTGACCTCGGATCAGG
		Dothidea_insculpta                      ---------------GAGTGACTAACCG--T-CCTCCGA-CTTCCAACCCTC-TGTTGTTATAACT----ACCTT---------------GTTGCTTTGGCGG-GACCGT-TCGGTCCTCCGA----GCGC-----------------ACCAGTCTT------------------------CGG--AC--AGGT--GAGTGCCCGCCAGA-GTCCAACC----AAACTCT-TGTTTTT-AACCAGT----CGTCTGAGTA-TAA-----AATT---TTAAT-TAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTAC-ACCACTCAAGC-----ACTGCTTGGTATT-GGGCA-TCGTCC-----GTCG-AAAG-GCGGG--CGTGCCTCGAAGA-CCTC-GGCGGGGTTTCT--CCAACTTCGGGC-GTAGTAGAGTT-------AAATC-GAACGTCTT-ATAAGC-TTGGTGGGACTCCATTGCCGTTAAA-CCTTTT-ATT---TTCTAGGTTGACCTCGGAT----
		Diaporthe_phaseolorum_AF001016          -GGATCATTGCT--GGAACGC-GCCCCA----GGCGCAC-CCAGAAACCCTT-TGT-G----AACTCAT-ACCTT------------ACTGTTGCCTCGGCGCAG---GCC--GGCCCCCCCA-GG-G-GG---------------------CCCCT------------------------CGGAGACG-AGGA--GCAGGCCCGCCGGC-GGCCAAGC----CAACTCT-TGTTTTT-ACACCGAA---ACTCTGAGCA--AA-----AAAC---ACAAA-TGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACC-CTCAAGC-----CTGGCTTGGTGTTGGGGCA--CTGCCT----GT---A----GAAGG-GCAGGCCCTGAAATCTAGT-GGCG-GGCTCGCCAGGA-CCCCGAGC-GCAGT--AGTT--------AAAC-CCTCGCTCG-GG-AGGCCCTGGCGGT-GCCC-TGCCGTTAAA-CCCCCAACTTC--TGAAAATTTGACCTCGGATCAGG
		Diaporthe_meridionalis                  -GGATCATTGCT--GGAACGC-GCCCCA----GGCGCAC-CCAGAAACCCTT-TGT-G----AACTCAT-ACCTT------------ACTGTTGCCTCGGCGCAG---GCC--GGCCCCCCCA-GG-G-GG---------------------CCCCT------------------------CGGATACT-ATGA--GCAGGCCCGCCGGC-GGCCAAGC----CAACTCT-TGTTTTT-ACACCGAA---ACTCTGAGCA--AA-----AAAC---ACAAA-TGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACC-CTCAAGC-----CTGGCTTGGTGTTGGGGCA--CTGCCT----GT---A----GAAGG-GCAGGCCCTGAAATCTAGT-GGCG-GGCTCGCCAGGA-CCCCGAGC-GCAGT--AGTT--------AAAC-CCTCGCTCG-GG-AGGCCCTGGCGGT-GCCC-TGCCGTTAAA-CCCCCAACTTC--TGAAAATTTGACCTCGGATCAGG
		Diaporthe_phaseolorum_AF001028          -GGATCATTGCT--GGAACGC-GCCCCA----GGCGCAC-CCAGAAACCCTT-TGT-G----AACTTAT-ACCTT------------ACTGTTGCCTCGGCGCAG---GCC--GGCCCCCT-AC-G-G-GG---------------------CCCCT------------------------TGGCGACA-AGGA--GCAGGCCCGCCGGC-GGCCAAGT----TAACTC--TGTTTTT-ACACTGAA---ACTCTGAGCA--CA-----AAAC---ATAAA-TGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACC-CTCAAGC-----CTGGCTTGGTGTTGGGGCA--CTGCCT----C-CT-C----GCGGGGGCAGGCCCTGAAATACAGT-GGCG-AGCTCGCCAGGA-CTCCGAGC-GCAGT--AGTT--------AAAC-CCTCGTTCT-GGAAGG-CCTGGCGGT-GCCC-TGCCGTTAAA-CCCCCAACTCC--TGAAAATTTGACCTCGGATCAGG
		Diaporthe_helianthi                     -GGATCATTGCT--GGAACGC-GCCTC-----GGCGCAC-CCAGAAACCCTT-TGT-G----AACTTAT-ACCTA------------TCTGTTGCCTCGGCGAAG---GCC--GGCCTCCCCACCG-A-GG---------------------CCCCT------------------------TGGGAACA-AGGA--GCAG-CCCGCCGGC-GGCCAACC----AAACTCT-TGTTTCTTAG--TGAA---TCTCTGAGTA-AAAA----AAAC---ATAAA-TGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTTCAACC-CTCAAGC-----CTGGCTTGGTGATGGGGCA--CTGCTT----C-CG-A----GAGGGAGCAGGCCCTGAAATCTAGT-GGCG-AGCTCGCCAGGA-CCCCGAGC-GTAGT--AGTT--------ATAT--CTCGCTCC-GGAAGGCCCTGGCGGT-GCCC-TGCCGTTAAA-CCCCCAACTTC--TGAAAATTTGACCTCGGATCAGG
		Endothia_gyrosa_AF368324                --------------------------------------C-CCAGATACCCTT-TGT-G----AACTTAT-ACCATTTT---------ATCGTTGCCTCGGCGCTGA--GCT--GGGGGCACTCTCCTG-TGCC-------------------CCCCCACC--------------GTGCAA---GC-GG--TGGA--GCAGGCCCGCCGGC-GGCCCACC----AAACTCTTTGTTTTT-AGACCGTATCTCCTCTGAGTG-TTTA----CAA--AAACAAA-TGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTGGAATTCCAGCGGGCATGCCTGTTCGAGCGTCATTTCAACC-CTCAAGC-----CTGGCTTGGTGTTGGGGCA--CTACCT----GT---ACA--ACGG---TAGGCCCTGAAATTTAGT-GGCG-GGCTCGCTAAGA-CTCTGAGC-GTAGT--AGTTT--------ATCACCTCGCTTT-GGAAGG-ATTAGCGGT-GCTCTTGCCG-TAAAACC----------------------------------
		Endothia_gyrosa_AF368326                --------------------------------------C-CCAGATACCCTT-TGT-G----AACTTAT-ACCATTTT---------ATCGTTGCCTCGGCGCTGA--GCT--GGGGGCACTCTCCTG-TGCC-------------------CCCCCACC--------------GTGCAA---GC-GG--TGGA--GCAGGCCCGCCGGC-GGCCCACC----AAACTCTTTGTTTTT-AGACCGTATCTCCTCTGAGTG-TTTA----CAA--AAACAAA-TGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTGGAATTCCAGCGGGCATGCCTGTTCGAGCGTCATTTCAACC-CTCAAGC-----CTGGCTTGGTGTTGGGGCA--CTACCT----GT---ACA--ACGG---TAGGCCCTGAAATTTAGT-GGCG-GGCTCGCTAAGA-CTCTGAGC-GTAGT--AGTTT--------ATCACCTCGCTTT-GGAAGG-ATTAGCGGT-GCTCTTGCCG-TAAAACC----------------------------------
		Cryphonectria_macrospora                --------------------------------------C-CCAGATACCCTT-TGT-G----AACTCAT-ACCATTTT---------ATCGTTGCCTCGGCGCTGA--GCCCCGGGGGGGATTTTTGAGAG-AG----------TCTCTCTCTCCTTCCTTCTCGCCTTCTACCGTGCAAACGGTTGTT--GGA--GCAGGCCCGCCGGC-GGCCCACC----AAACTCTTTGTTTTT-ATAACCTATCTCTTCTGAGTA--CAT----TTAAAAAAAAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTGGAATTCCAGCGGGCATGCCTGTTCGAGCGTCATTTCAACC-CTCAAGC-----CTGGCTTGGTGTTGGGGTA--CTACCC----GT---CAA--ACGG---TAGGCCCTGAAATTTAGT-GGCG-GGCTCGCTAAGA-CTCTGAGC-GTAGT--AGTTTTTT------CAACCTCGCTTT-GGAAGG-ATTAGCGGTTGCTCTTGCCG-TAAAACC----------------------------------
		Cryphonectria_parasitica                --------------------------------------C-CCAGATACCCTT-TGT-G----AACTTATAACCATTTT---------ATCGTTGCCTCGGCGCTGA--GCCCGGGGGGGGGTTGGCGAAGGCAGATTTTCTTCCTTCTCCCCTCCCTCCCCCCCCTCTTCCACCGTGCAAACGGTTGTTGGGGA--GCAGGCCCGCCGGC-GGCCCACT----AAACTCTTTGTTTTT-ATAACCTATCTCTTCTGAGTA--CAT----AAACAAAAAAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTGGAATTCCAGCGGGCATGCCTGTTCGAGCGTCATTTCAACC-CTCAAGC-----TTGGCTTGGTGTTGGGGTA--CTACCC----GT---AAA--ACGG---TAGGCCCTGAAATTTAGT-GGCG-GGCTCGCTAAGA-CTCTGAGC-GTAGT--AGTTTTTTTTTCTTCAACCTCGCTTT-GGAAGG-ATTAGCGGTTGCTCTTGCCG-TAAAACC----------------------------------
		Cryphonectria_cubensis_AF265654         --------------------------------------C-CCAGATACCCTT-TGT-G----AACTTAT-ACCTTTTT---------ATCGTTGCCTCGGCGCCGA--GCC--GGGAGTGCTCTTCTG-TGCT-------------------CCCCCACC--------------GCGCAA---GC-AG--TGGA--GCAGGCCCGCCGGC-GGCCCACC---AAAACTCTTTGTTTTT-AGAACGTATCTCTTCTGAGTG-TTTA----TAACAAAACAAA-TGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTGGAATTCCAGCGGGCATGCCTGTTCGAGCGTCATTTCAACC-CTCAAGC-----CTGGCTTGGTGTTGGGGCA--CTACCT----GTT-CACA--GCGGG--TAGGCCCTGAAATTTAGT-GGCG-GGCTCGCTAAGA-CTCTGAGC-GTAGT--AGTTTTT------ATCACCTCGCTTT-GGAAGG-ATTAGCGGT-GCTCTTGCCG-TAAAACC----------------------------------
		Cryphonectria_cubensis_AF265657         --------------------------------------C-CCAGATACCCTT-TGT-G----AACTTAT-ACCTTTTT---------ATCGTTGCCTCGGCGCCGA--GCC--GGGAGTGCTCTTCTG-TGCT-------------------CCCCCACC--------------GCGCAA---GC-AG--TGGA--GCAGGCCCGCCGGC-GGCCCACC----AAACTCTTTGTTTTT-AGAACGTATCTCTTCTGAGTG-TTTA----TAAC-AAACAAA-TGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTGGAATTCCAGCGGGCATGCCTGTTCGAGCGTCATTTCAACC-CTCAAGC-----CTGGCTTGGTGTTGGGGCA--CTACCT----GTT-CACA--GCGGG--TAGGCCCTGAAATTTAGT-GGCG-GGCTCGCTAAGA-CTCTGAGC-GTAGT--AGTTTTT------ATCACCTCGCTTT-GGAAGG-ATTAGCGGT-GCTCTTGCCG-TAAAACC----------------------------------
		Prosopidicola_mexicana_CBS_113530       -GGATCATTGCT--GGAAGGC-GCCGCCCCGCGGCGCGCCCCAGACACCCTT-TGT-G----AACTTATGATTCTCGACCCGAGAATATCGTTGCCTCGGCGC-G---GCC--CGGGGGGTTTCGGCCCTGAA-------------------CCCCTCCCCGTCCCG-GTAC----TCCC--GG---G--CGGA--GCAGGCCCGCCGGC-GGCCCTAT----AGACTCT-TGTTTTTCAG--CGT--CTCCTCTGAGTTTTTTTTTTACCACAAAACAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTGGTATTCCAGCGGGCATGCCTGTTCGAGCGTCATTTCAACC-CTCAAGCCCCCCGGGGCCTGGTGTTGGGGCG--CTGCCT----CTTTTACCCCGAGG---CAGGCCCCGAAATCGAGT-GGCG-GGCTCGCCAGGA-CTCCGAGC-GTAGT--AGTCTG-------ACCACCTCGCTTT-GGACCGTACTGGCGCG-GCCC-TGCCG-TAAAACCGTCTCTGACCTCGTAGAGTTGACCTCGGATCAGG
		Prosopidicola_mexicana_CBS_113529       -GGATCATTGCT--GGAAGGC-GCCGCCCCGCGGCGCGCCCCAGACACCCTT-TGT-G----AACTTATGATTCTCGACCCGAGAATATCGTTGCCTCGGCGC-G---GCC--CGGGGGGTTTCGGCCCTGAA-------------------CCCCTCCCCGTCCCG-GTAC----TCCC--GG---G--CGGA--GCAGGCCCGCCGGC-GGCCCTAT----AGACTCT-TGTTTTTCAG--CGT--CTCCTCTGAGTTTTTTTTT-ACCACAAAACAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTGGTATTCCAGCGGGCATGCCTGTTCGAGCGTCATTTCAACC-CTCAAGCCCCCCGGGGCCTGGTGTTGGGGCG--CTGCCT----CTTTTACCCCGAGG---CAGGCCCCGAAATCGAGT-GGCG-GGCTCGCCAGGA-CTCCGAGC-GTAGT--AGTCTG-------ACCACCTCGCTTT-GGACCGTACTGGCGCG-GCCC-TGCCG-TAAAACCGTCTCTGACCTCGTAGAGTTGACCTCGGATCAGG
		Leucostoma_persoonii                    -GGATCATTGCT--GGAA-GC-GCCGCAA---GGTGCAC-CCAGAAACCCTT-TGT-G----AACTTAT-ACC-----TAT------ATCGTTGCCTCGGCGCCGGCCGCC--TCTCCC-TCGTGGA-GGGGG-------------------CCCCCTCCTGGTCGT--AAAAA--GCCA--GG--GG--AGGACAGCAGGCCCGCCGGT-GGCCTACT----AAACTCT-TGTTTTT-ATTGAGTAA-AATC-TGAGTAA---------GCTT-C-TAAA-TGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCAGAGGGCATGCCTGTTCGAGCGTCATTTCAACC-CTCAAGC-----CTAGCTTGGTGTTGGGGCA--TTACCTGACTGTTT-ACAG-AAGGG--TAAGCCCTGAAATTTAGT-GGCG-AGCTCGCCAGGA-CTCCGAGC-GCAGT--AGTT--------AAAC-CCTCGCTTT-GGATAGTACTGGCGCG-GCCC-TGCCG-TAAAACCCCCAACTTC--TGAAAATTTGAC-----------
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 662 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
CHARSET its = 39 - 628 ; 
 OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;