#NEXUS [written Mon Feb 20 00:17:15 CET 2012 by Mesquite version 2.01 (build j28) at Carmelo-TOSH/192.168.1.132] BEGIN TAXA; TITLE HUWE1_Q_INSI_1_onlyCoding; DIMENSIONS NTAX=25; TAXLABELS Carabus_cancellatus_ROMA94106 Carabus_monilis_SAOU1538 Carabus_morbillosus_MAZA5908 Carabus_morbillosus_TUNC1624 Carabus_morbillosus_TUNA1622 Carabus_morbillosus_TUNB1623 Carabus_auronitens_ROMA93906 Carabus_rutilans_SENY1548 Carabus_rugosus_KSAR65807 Carabus_rugosus_SMAR43907 Carabus_abbreviatus_TENE15007 Carabus_famini_MORR54807 Carabus_famini_EURY1625 Carabus_riffensis_KETA569 Carabus_macrocephalus_FORO157 Carabus_lusitanicus_VESC5 Carabus_dufourii_ZUHE111 Carabus_cancellatus_TACHcc816 Carabus_melancholicus_EALM42207 Carabus_melancholicus_TIDI39104 Carabus_melancholicus_ROBU37 TURQ52001_auropuntatum Calosoma_sycophanta_CALO25405 Carabus_clatratus_TURQ51901 Carabus_irregularis_ROMA94006 ; END; BEGIN CHARACTERS; TITLE HUWE1_Q_INSI_1_onlyCoding; DIMENSIONS NCHAR=562; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Carabus_cancellatus_ROMA94106 GATATGGAGCTGGACGATCCTGAAGTAGCACCGAAAACCAGCACAAGTCCT-------GT--TGCAACCAGTGGC--------AACCAGAATGG-TACACGTAACATTGCTGTTGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAATTACCCATTGATCGAGACACGCTGCACGCGGTGATGCGTATTTGTCTGCGACTTACACGTGATTTCCGTTGCGCCAGAATATTCGCAGAACAAGGTGGCGTTCGTTTGTTGCTGGAAATGACCCAAGCATCTTCTTTTACCGGTTTTGTAACACTGGCTACATTGTTAATCCGCCACGTAATTGAAGAACCGCAGACTCTATGTTTGGCCATCGAGAAGGTTATCCGTGGCCGTGCCTTGAACACAATACCACCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_monilis_SAOU1538 GATATGGAGCTGGACGACCCTGATGTAGCACCGAAAACCAGCACAAGTCCG-------GT--TGCGAACAGCGGC--------AACCAGAACGG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATTATCGTACGGACCTGCGTGAACCTGATGAAGTTACCGATTGATCGAGACACATTGCACGCTGTGATGCGCATTTGTCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATATTCGCAGAGCAGGGTGGCGTTCGTTTGTTACTGGAAATGACCCAAGCATCTTCATTTACCGGTTTTGTCACACTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTGGCCATCGAGAAGGTTATCCGAGGACGTGCCTTGAATACAATACCACCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGATATTAGCGCATTGCACAGAAGAAGCAGTAAGT Carabus_morbillosus_MAZA5908 GATATGGAACTGGATGATCCAGATGTAGCACCGAAAACCAGCACAATTCCT-------GT--TGCGACCAGCGGC--------AACCAGAATGG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAATTACCCATTGATAGAGACACACTGCACGCTGTGATGCGCATTTGTCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATTTTCGCAGAACAAGGTGGCGTCCGTTTGTTGCTGGAAATGACTCAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTATTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTGGCCATCGAGAAGGTTATCCGAGGACGTGCCTTGAATACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_morbillosus_TUNC1624 ???????????????????????????????????????????????????????????????????????????????????????????????????????????????GTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAATTACCCATTGATAGAGACACACTGCACGCTGTGATGCGCATTTGTCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATTTTCGCAGAACAAGGTGGTGTCCGTTTGTTGCTGGAAATGACTCAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTATTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTAGCCATCGAGAAGGTTATCCGAGGACGTGCCTTGAATACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_morbillosus_TUNA1622 GATATGGAACTGGATGATCCAGATGTACCACCGAAAACCAGCACAATTCCT-------GT--TGCGACCACCGGC--------AACCAGAATGG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATCATCGTACGGACCTGTGTGAACCTGATGAAATTACCCATTGATAGAGACACACTGCACGCTGTGATGCGCATTTGTCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATTTTCGCAGAACAAGGTGGCGTTCGTTTGTTGCTGGAAATGACTCAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTATTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTAGCCATCGAGAAGGTTATCCGAGGACGTGCCTTGAATACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTCTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_morbillosus_TUNB1623 GATATGGAACTGGATGATCCAGATGTAGCACCGAAAACCAGCACAATTCCT-------GT--TGCGACCACCGGC--------AACCAGAATGG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATCATCGTACGGACCTGTGTGAACCTGATGAAATTACCCATTGATAGAGACACACTGCACGCTGTGATGCGCATTTGTCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATTTTCGCAGAACAAGGTGGTGTCCGTTTGTTGCTGGAAATGACTCAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTATTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTAGCCATCGAGAAGGTTATCCGAGGACGTGCCTTGAATACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_auronitens_ROMA93906 GATATGGAACTGGACGATCCAGATGTAGCACCGAAAACCAGCACAAGTCCT-------GT--TGCGAACAGCGGC--------AACCAGAACGG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGTTACCAATTGATAGAGACACACTGCACGCTGTGATGCGCATTTGTCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATATTCGCAGAACAAGGTGGTGTCCGTTTGTTGCTGGAAATGACCCAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTGGCCATCGAGAAGGTTATACGAGGACGTGCCTTGAATACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_rutilans_SENY1548 GATATGGAACTGGACGATCCAGATGTAGCACCGAAAACCAGCACAAGTCCT-------GT--TGCGAACAGCGGC--------AACCAGAACAG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGCGTGATAATCGTACGCACCTGTGTGAACTTGATGAAGTTACCAATTGATAGAGACACACTGCACGCTGTGATGCGCATTTGTCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTGCTGGAAATGACCCAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAGACTCTGTGTTTGGCCATCGAGAAGGTTATCCGAGGACGTGCCTTAAATACAATACCACCATCGCACAAGGAAATCTTGTACTTATTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_rugosus_KSAR65807 GATATGGAACTGGACGATCCAGATGTAGCACCGAAAACCAGCACAAGCCCT-------GT--TGCGAACAGCGGC--------AACCAGAACGG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGTTACCAATTGATAGAGACACACTGCACGCTGTGATGCGCATTTGCCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTGCTGGAAATGACCCAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTATTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTGGCCATCGAGAAGGTTATCCGAGGACGTGCCTTGAATACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGCATTGACATAAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_rugosus_SMAR43907 GATATGGAACTGGACGATCCAGATGTAGCACCGAAAACCAGCACAAGCCCT-------GT--TGCGAACAGCGGC--------AACCAGAATGG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGTTACCAATTGATAGAGACACACTGCACGCTGTGATGCGCATTTGCCTGCGACTGACACGTGATTTCCGTTGCGCTAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTGCTGGAAATGACCCAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTATTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTGGCCATCGAGAAGGTTATCCGAGGACGTGCCTTGAATACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATTTTGCGCATTGACATAAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_abbreviatus_TENE15007 GATATGGAGCTGGACGATCCAGATGTGCCACCAAAAACCAGCACCAGTCCT-------GT--TGCAAACACTTGC--------AACCAGAACGG-TACACGTAACATTGCTGTCGAAGGTCTCAGTGAAGAGTGTTGTGTGATCATCGTACGGACCTGTGTGAATCTGATGAAACTACCCATTGATAGAGACACTCTGCACGCTGTGATGCGTATTTGTCTGCGACTTACACGTGACTTCCGCTGCGCCAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTATTGGAAATGACGCAAGCATCGTCTTTTACTGGATTTGTAACCCTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAAACTCTATGTTTGGCTATCGAGAAAGTTATCCGAGGCCGTGCCTTGAACACAATACCACCATCACACAAAGAAATCCTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCTGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGATATTAGCGCTTTGCATAGACGTAGCAGTAAGT Carabus_famini_MORR54807 GATATGGAGCTGGACGATCCAGATGTGCCACCAAAAACCAGCACAAGTCCT-------GT--TGCAACCACTCTC--------AACCAGAACGG-TACACGTAACATTGCTGTCGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAACTACCCATTGATAGAGACACACTGCATGCTGTGATGCGCATTTGTCTGCGACTCACACGTGATTTCCGCTGCGCCAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTGTTGGAAATGACGCAAGCATCGTCTTTTACCGGATTTGTAACCCTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAAACTCTGTGTTTGGCCATCGAGAAGGTAATCCGAGGCCGTGCCTTGAACACAATACCACCATCACACAAAGAAATCCTGTACTTGTTCCGACAAGTCAGTTCAGCTGTTTGCCGAAATCCTGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGATATTAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_famini_EURY1625 ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????CGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAACTACCCATTGATCGAGACACACTTCACGCTGTGATGCGCATTTGTCTGCGACTCACACGTGATTTCCGCTGCGCCAGAATATTCGCAGAACAAGGAGGCGTCCGTTTGTTGTTGGAAATGACGCAAGCATCGTCATTCACCGGATTCGTAACCCTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAAACTCTGTGTTTGGCCATCGAGAAGGTAATCCGAGGCCGTGCCTTGAACACAATTCCACCATCACACAAAGAAATCCTGTACTTGTTCCGACAAGTCAGTTCAGCTGTTTGCCGAAATCCTGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGATATTACCGCTTTACATAGACGAAGCAGTAAGT Carabus_riffensis_KETA569 GATATGGAGCTGGATGATCCAGATGTACCACCAAAAACCAGCACAAGTCCC-------GT--TGCGAACACTTGC--------AACCAGAATGG-AACACGTAACATTGCTGTCGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGAACCTGTGTGAACCTGATGAAGCTACCCATTGACAGAGACACACTGCACGCTGTGATGCGTATTTGTCTGCGACTCACACGTGATTTCCGTTGCGCCAGAATATTCGCGGAACAAGGTGGCGTCCGTTTGTTGCTTGAAATGACGCAAGCATCGTCTTTTACCGGATTTGTAACCCTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTGGCCATCGAGAAGGTTATTCGAGGCCGTGCCTTGAACACAATACCGCCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTGTGCAAATCAATCTTGCGTATTGATATTAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_macrocephalus_FORO157 ??????GAGCTGGACGATCCAGATGTACCACCAAAAACCAGCACAAGTCCT-------GT--TGCGACCACTTGC--------AACCAGAACGG-AACACGTAACGTTGCTGTCGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGCTACCCATTGATAGAGACACACTGCACGCTGTGATGCGTATTTGTCTGCGACTCACACGTGATTTCCGTTGCGCCAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTGCTGGAAATGACGCAAGCATCGTCTTTTACCGGATTTGTAACCCTGGCTACATTGTTAATCCGCCACGTGATTGAAGAACCACAGACTCTATGTTTGGCCATCGAGAAGGTTATTCGAGGCCGTGCCTTGAACACAATACCACCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGATATTAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_lusitanicus_VESC5 GATATGGAGCTGGACGATCCAGATGTACCACCAAAAACCAGCACAAGTCCT-------GT--TGCGACCACTTGC--------AACCAGAACGG-AACACGTAACGTTGCTGTCGAAGGCCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGCTACCCATTGATAGAGACACACTGCACGCTGTGATGCGTATTTGTCTGCGACTCACACGTGATTTTCGTTGCGCCAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTGCTGGAAATGACGCAAGCGTCGTCTTTTACCGGATTTGTAACCCTGGCTACATTGTTAATCCGCCACGTGATTGAAGAACCACAGACTCTCTGTTTGGCCATCGAGAAGGTTATTCGAGGCCGTGCCTTGAACACAATACCACCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGATATTAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_dufourii_ZUHE111 GATATGGAGCTGGACGATCCAGATGTACCACCAAAAACCAGCACAAGTCTT-------GT--TGCGAACACTTGC--------AACCAGAACGG-AACACGTAACGTTGCTGTCGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGCTACCCATTGATAGAGACACACTGCACGCTGTGATGCGTATTTGTCTGCGACTCACACGTGATTTCCGTTGCGCCAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTGCTGGAAATGACGCAAGCATCGTCTTTTACCGGATTTGTAACTCTGGCTACATTGTTAATCCGCCATGTGATTGAAGAACCACAGACTCTCTGTTTGGCCATCGAGAAGGTTATTCGAGGCCGTGCCTTGAACACAATACCACCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGATATTAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_cancellatus_TACHcc816 GATATGGAGCTGGACGATCCAGACATGCCACCAAAATCCAGTACGAGTCCA-------GT--TGCGAACAGTTTC--------AATCCGAACTG-TACACGTAACATTGCTGTGGAAGGTCTCAGTGAAGAGTGTTGTGTGATCATCGTACGGACCTGTGTGAACCTGATGAAGTTACCCATTGATCGAGACACATTGCATGCTGTGATGCGTATTTGTCTGCGACTCACACGGGATTTCCGCTGTGCTAGAATATTTGCAGAACAAGGTGGCGTCCGTTTGTTGTTGGAAATGACCCAAGCATCGTCTTTCACCGGATTTGTGACACTGGCCACATTGTTGATCCGTCACGTGATTGAAGAACCCCAAACACTATGTTTAGCCATCGAAAAGGTTATCCGAGGTCGCGCCTTAAACACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGATGCATTCTTGGAGGTTTGCAGAGCAATCTTGCGTATTGACATTAGCGCATTGCATAGACGTAGCAGTAAGT Carabus_melancholicus_EALM42207 GATATGGAGCTGGACGATCCGGACGTGCCACCAAAAACCAGCACAAGTCCT-------GT--TGCGAACAGTTGC--------AACCAGAACGG-TACACGTAACATTGCTGTCGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGCTACCCATTGATAGAGACACACTGCATGCTGTGATGCGTATTTGTCTGCGACTCACACGTGATTTCCGTTGCGCTAGAATATTCGCAGAACAAGGTGGTGTGCGTTTGTTGTTGGAAATGACACAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAGACTCTGTGTTTAGCCATCGAGAAGGTTATTCGCGGCCGTGCCTTGAACACAATACCACCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_melancholicus_TIDI39104 GATATGGAGCTGGACGATCCGGACGTGCCACCAAAAACCAGTACAAGTCCT-------GT--TGCGAACAGTTGC--------AACCAGAACGG-TACACGTAACATTGCTGTCGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGCTACCCATTGATAGAGACACACTGCATGCTGTGATGCGTATTTGTCTGCGACTCACACGTGATTTCCGTTGCGCTAGAATATTCGCAGAACAAGGTGGTGTGCGTTTGTTGTTGGAAATGACACAAGCATCGTCTTTTACCGGTTTTGTAACACTGGCTACATTGTTAATCCGTCACGTGATTGAAGAACCACAGACTCTGTGTTTAGCCATCGAGAAGGTTATTCGCGGCCGTGCCTTGAACACAATACCACCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_melancholicus_ROBU37 GATATGGAGCTGGACGATCCGGACGTGCCACCAAAAACCAGCACAAGTCCT-------GT--TGCGAACAGTTGC--------AACCAGAACGG-TACACGTAACATTGCTGTCGAAGGTCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGCTACCCATTGATAGAGACACACTGCATGCTGTGATGCGTATTTGTCTGCGACTTACACGTGATTTCCGTTGCGCTAGAATATTCGCAGAACAAGGTGGTGTGCGTTTGTTGTTGGAAATGACACAAGCGTCGTCTTTTACCGGTTTTGTAACACTGGCTACATTGTTAATCCGTCATGTGATTGAAGAACCACAGACTCTGTGTTTAGCCATCGAGAAGGTTATCCGCGGCCGTGCCTTGAACACAATACCACCATCGCACAAAGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCTGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT TURQ52001_auropuntatum GATATGGAGCTGGATGATACAGACGTAGCACCAAAGACCAGCACAAGTCCT-------GT--TGCGAACAACTGC--------AGCCAGAATGG-CACACGTAATATTGCTGTCGAAGGCCTCAGTGAAGAGTGCTGTGTGATAATCGTACGGACTTGCGTGAACCTGATGAAACTACCCATTGATCGAGACACACTGCATGCTGTGATGCGCATTTGCCTGAGACTCACACGTGATTTCCGCTGCGCCAGAATATTCGCAGAACAAGGAGGTGTCCGTTTGTTGTTGGAAATGACCCAAGCGTCATCCTTCACCGGATTTGTAACCCTGGCCACGTTGTTAATCCGTCACGTGATTGAAGAACCACAGACTCTATGTTTGGCCATCGAGAAGGTTATCCGAGGCCGTGCCTTGAACACAATCCCACCATCGCACAAAGAAATCTTATACTTGTTCAGGCAAGTCAGTTCAGCCGTTTGCCGTAATAGCGAAGCGTTCTTGGAAGTTTGCAAATCAATTTTGCGTATTGATATTAGCGCATTGCATAGACGAAGCAGTAAGT Calosoma_sycophanta_CALO25405 ???ATGGAGCTGGATGATCCAGATGTACCACCAACGATCACCATAAGTCCTGAACCAAGTCCCAGCAACAGCAGCGTGAACATAGCTGCAGCAGCCACACGTAACATTGCCGTCGAAGGTCTCAGTGAAGAGTGCTGTGTGATAATCGTACGGACTTGCGTGAACCTGATGAAACTACCCATTGATCGGGATACACTGCATGCTGTGATGCGTATTTGCCTGAGACTTACACGTGATTTCCGCTGCGCCAGAATATTCGCAGAACAAGGTGGTGTCCGTTTGTTGTTGGAAATGACCCAGGCGTCATCCTTCACCGGATTTGTAACCCTGGCCACGTTGTTGATCCGTCACGTGATTGAAGAACCACAGACCCTATGTTTGGCCATCGAGAAGGTTATCCGAGGCCGTGCCTTGAACACAATCCCGCCATCGCACAAAGAGATCTTATACTTGTTCAGACAAGTCAGTTCAGCCGTCTGCCGTAATCCCGAAGCGTTCTTGGAAGTTTGCAAATCAATTTTGCGCATTGACATTAGCGCTTTGCACAGACGAAGCAGTAAGT Carabus_clatratus_TURQ51901 GATATGGAGCTGGACGATCCAGACGTAGCACCAAAAACCAGCACAAGTCCT-------GT--TGCGAACAGTACG--------GTACAGAACGG-TACACGTAACATTGCAGTCGAAGGCCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATGAAGCTACCCATTGATAGAGACACACTGCATGCTGTGATGCGCATTTGTCTGAGACTCACACGTGATTTCCGCTGCGCCAGAATATTCGCCGAACAAGGTGGCGTCCGTTTGTTGTTGGAAATGACACAAGCATCGTCTTTTACCGGATTTGTAACCCTGGCCACATTGTTAATCCGTCACGTGATTGAGGAACCACAAACTCTATGTTTGGCCATCGAGAAGGTTATCCGAGGCCGTGCCTTGAACACAATACCACCATCGCACAAAGAGATCTTATACTTATTCAGACAAGTCAGTTCAGCCGTTTGCCGAAATCCCGAAGCATTCTTGGAGGTTTGCAAATCAATTTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT Carabus_irregularis_ROMA94006 GATATGGAGCTGGACGATCCAGATGTAGCACCGAAAACCAGCACAAGTCCG-------GT--TGCGAACAGTTGC--------AACCAGAACGG-TACACGTAACATTGCCGTCGAAGGCCTCAGTGAAGAGTGTTGTGTGATAATCGTACGGACCTGTGTGAACCTGATTAAGTTACCCATTGACAGAGACACACTGCACGCTGTGATGCGCATTTGCCTGAGACTCACACGTGATTTCCGCTGCGCCAGAATATTCGCAGAACAAGGTGGCGTCCGTTTGTTGTTGGAAATGACACAAGCATCGTCTTTTACCGGATTTGTAACGCTGGCCACATTGTTAATCCGTCACGTGATTGAAGAACCTCAGACTCTATGTTTGGCCATCGAGAAGGTTATCCGAGGCCGTGCCTTGAACACAATACCACCATCGCACAAGGAAATCTTGTACTTGTTCAGACAAGTCAGTTCAGCCGTTTGCCGAAATCCCGAAGCGTTCTTGGAGGTTTGCAAATCAATCTTGCGTATTGACATTAGCGCATTGCATAGACGAAGCAGTAAGT ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 562; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 562; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 562; END; BEGIN TREES; Title 'Trees from "HUWE1_Q_INSI_1_onlyCoding_NP_ULN_cons.(time).con"'; LINK Taxa = Untitled_Taxa_Block; TRANSLATE 1 Carabus_cancellatus_ROMA94106, 2 Carabus_monilis_SAOU1538, 3 Carabus_morbillosus_MAZA5908, 4 Carabus_morbillosus_TUNC1624, 5 Carabus_morbillosus_TUNA1622, 6 Carabus_morbillosus_TUNB1623, 7 Carabus_auronitens_ROMA93906, 8 Carabus_rutilans_SENY1548, 9 Carabus_rugosus_KSAR65807, 10 Carabus_rugosus_SMAR43907, 11 Carabus_abbreviatus_TENE15007, 12 Carabus_famini_MORR54807, 13 Carabus_famini_EURY1625, 14 Carabus_riffensis_KETA569, 15 Carabus_macrocephalus_FORO157, 16 Carabus_lusitanicus_VESC5, 17 Carabus_dufourii_ZUHE111, 18 Carabus_cancellatus_TACHcc816, 19 Carabus_melancholicus_EALM42207, 20 Carabus_melancholicus_TIDI39104, 21 Carabus_melancholicus_ROBU37, 22 TURQ52001_auropuntatum, 23 Calosoma_sycophanta_CALO25405, 24 Carabus_clatratus_TURQ51901, 25 Carabus_irregularis_ROMA94006; TREE HUWE1_Q_INSI_1_onlyCoding_NP_ULN = (((1:14.251829547685995,(2:8.986882620125499,((3:3.306618051632004,(4:1.797022085024671,(5:0.9554378553900982,6:0.9554378553901905):0.8415842296345764):1.5095959666074323):4.467866447402999,((7:4.5215985373180985,8:4.5215985373180985):0.6908470135982974,(9:0.7889609644508226,10:0.7889609644508226):4.423484586465609):2.562038948118703):1.2123981210904002):5.264946927560098):6.923485636506504,(((11:9.365231773201703,(12:4.608242319029998,13:4.608242319029998):4.756989454171702):5.147573055661699,(14:10.441357258490603,((15:2.0203516137883,16:2.0203516137883):2.532955937993501,17:4.553307551781797):5.888049706708703):4.071447570372898):3.9824932110386015,(18:12.883507852969998,((19:0.8125534356974526,20:0.8125534356974526):2.122442005353051,21:2.934995441050379):9.9485124119193):5.611790186932499):2.6800171442900016):4.580617649836999,(((22:7.865602341150002,23:7.865602341150002):6.589109023776002,24:14.454711364926402):1.7925903477621556,25:16.247301712688557):9.508631121340844); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 134341251707832926; tell It; setDefaultOrder 11 12 6 20 18 19 9 13 5 14 16 7 2 4 3 23 24 15 1 17 8 22 0 21 10; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 2380574660476829484; checksum 0 1768270254 null; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #2380574660476829484 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 700 500; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleColorsPanel off; birdsEyeWidth 2; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; endTell; endTell; endTell; end;