#NEXUS [written Tue Aug 21 10:32:43 CEST 2012 by Mesquite version 2.75 (build 566) at 1x-193-157-241-103.uio.no/193.157.241.103] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=36; TAXLABELS Adenoides_eludens Akashiwo_sanguinea Alexandrium_fundyense Alexandrium_minutum Amphidinium_carterae Amphidinium_massartii Azandinium_spinosum Crypthecodinium_cohnii Cryptosporidium_parvum Dinophysis_acuminata Dinophysis_caudata Eimeria_tenella Gymnodinium_aureolum Gymnodinium_catenatum Hematodinium_sp Heterocapsa_triquetra Karenia_brevis Karenia_mikimotoi Karlodinium_veneficum Lepiodinium_chlorophorum Lingulodinium_polyedrum Noctiluca_scintillans Oxyrrhis_marina Pentapharsodinium_dalei Perkinsus_marinus Pfiesteria_piscicida Polarella_glacialis Prorocentrum_lima Prorocentrum_micans Prorocentrum_minimum Pseudopfiesteria_shumwayae Scrippsiella_trochoideae Symbiodinium_c3 Thecadinium_kofoidii Theileria_parva Toxoplasma_gondii ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=1128; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Adenoides_eludens ATGAGTGAGGAGGAGGTTGCGGCGCTCGTTGTGGACAATGGGAGCGGCATGTGCAAGGCTGGCTTTGCCGGCGATGATGCACCACGAGCTGTTTTTCCTTCGATCGTGGGCCGACCGAAGATGCCGGGTATCATGGTAGGCATGGACCAGAAGGATAGCTACGTAGGGGATGAGGCGCAGAGCAAGCGCGGTGTGCTCACGTTAAAATACCCCATCGAGCACGGCATCGTCACGAATTGGGATGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGTTGCGTGTCGCACCCGAGGAGCACCCTGTGCTGTTGACCGAGGCCCCGCTGAACCCGAAGGCCAACCGCGAGAGGATGACGCAGATCATGTTCGAGACGTTCAACGTGCCCGCCATGTACGTCGCGATCCAGGCCGTGCTCTCCTTGTACGCCTCCGGCCGCACCACAGGGATCGTGATGGACTCCGGCGATGGCGTCTCGCACACGGTGCCGATCTACGAGGGCTACGCCcTGCCGCACGCCATCCTTCGCTTGGACTTGGCGGGCCGGGACCTCACCGAGTACTTGATGAAGATCCTCACGGAGCGCGGCTATTCCTTCACCACCACAGCCGAGCGCGAGATCGTGCGCGACGTCAAGGAGAAGTTGTGCTACATCGCTTTGGACTTCGACACCGAGATGAAGGCGGCCACTGAGAGCTCGGACAAGGAGAAGACCTACGAGCTCCCCGATGGCAACATCATCACTGTGGGCAGCGAGCGCTTCCGTTGCCCGGAGGTGCTCTTTCAGCCAAGCTTTGTTGGTAAGGAAGCGAGCGGAATCCACGACACGACGTTCCAGTCGATCATGAAGTGCGACGTAGACATCCGAAAGGACTTGTACTCCAACGTGGTGCTCTCGGGCGGCACAACGATGTTTTCCGGCATCGGCGAGCGCATGACAAAGGAGCTCACGGCTCTCGCGCCTTCGACAATGAAGATCAAGGTGGTGGCGCCACCAGAGCGTAAGTACTCCGTGTGGATCGGCGGCTCGATCCTGTCGTCTCTCAGCACCTTCCAGCAGATGTGGATCTCCAAGGGAGAGTACGATGAGTCCGGCCCGACGATCGTCCACAGGAAATGCTTC Akashiwo_sanguinea -----------------------------------------------------------------------------tgcacctcgtgcagtgttttcttccattgtaggacgtccaaaaatgccaggcatcatggtgggcatggatcaaaaagacagttacgtgggtgacgaagcacagagcaagcgtggtgtgttgaccttgaaatatccaatcgagcacggcatcgttacgaattgggatgatatggaaaaaatatggcatcatacgttttataatgagctgcgagttgctcctgaggaacacccagttcttctaactgaggcacctctcaatccgaaggctaacagagaacgcatgacccagatcatgttcgagacattcaatgtgcctgctatgtatgttgcgatccaggcagttctgtccttgtatgcatctggtcgaaccacaggtattgtgatggactcaggagacggtgtgtcacacacagtgccaatctatgaaggttatgcacttcctcatgccatatttcgtttggatttagcaggccgcgacctcactgaataccttatgaagattctcactgagcgcggctattccttcaccactactgcagagcgagaaattgttcgtgatgtcaaggaaaaacttagctatattgcacttgactttgactcagagatgaagtctgctacagagagctcagataaagagaaaacatatgagctaccagatggaaacatcatcacaattggtagcgagcgattcaggtgccctgaagtgctcttccagccaagcctgattggaaaagaggcaagtggcattcatgagactacgttccagtccatcatgaaatgtgatgtggacattcgcaaagatctttatgccaatgtggtgctgtctgggggaaccaccatgtttgaaggaattggtgagcgaatgaccagagagctaacagcgctggcgccctcaacaatgaagatcaaggtagtggctcctcctgagcgcaaatattctgtatggataggtggctcaatcttgtctgcactcagtacttttcaacagatgtggatttccaagggcgagtatgatgagtctgggccta----------------------- Alexandrium_fundyense ATGGGAGAGGAGGAGGTTGCAGCACTCGTCGTGGACAACGGCAGTGGCATGTGCAAGGCTGGGTTTGCAGGCGATGATGCCCCGCGTGCTGTTTTCCCATCCATAGTCGGCCGCCCAAAGATGCCAGGAATCATGGTGGGCATGGACCAGAAGGACAGCTACATAGGCGACGAGGCTCAGAGTAAGCGCGGAGTGCTCACACTGAAGTACCCCATTGAGCACGGCATTGTCACGAACTGGGATGACATGGAGAAGATTTGGCACCATACGTTCTACAACGAGCTCAGGGTCGCGCCAGAAGAGCACCCTGTCCTGCTGACTGAGGCGCCCCTGAACCCAAAGGCGAACCGCGAGAGGATGACGCAGATCATGTTTGAGACGTTCAACGTTCCTGCGATGTACGTTGCAATCCAGGCTGTTCTGTCGCTCTACGCGTCGGGCCGCACCACAGGTATTGTCATGGATTCCGGCGACGGCGTCTCACACACTGTGCCTATTTATGAAGGGTATGCCTTGCCGCACGCCATCCTCCGCTTGGATCTCGCAGGCCGTGACCTCACAGACTACCTCATGAAGATCCTCACGGAACGGGGATATTCCTTCACGACGACAGCTGAGAGAGAAATCGTTCGCGATATCAAGGAGAAACTCTGCTACATTGCATTGGATTTTGACACCGAGATGAAGTCGGCCACGGAGAGCTCGGACAAAGAGAAGACATATGAGCTTCCAGACGGAAACATCATCACTGTGGGCAGCGAGCGATTCCGTTGTCCGGAGGTTCTCTTCCAGCCGAGTCTGATCGGAAAGGAGGCTAGTGGCATTCATGACACCACGTTCCAGTCCATCATGAAGACGGACGTCGACATCCGCAAAGACCTCTATGCAAACGTCGTTCTTTCTGGCGGCACAACCATGTTTGGTGGCGTCGGCGAGCGCATGACCAAGGAGTTGACAGCCCTGGCCCCCTCCACTATGAAGATCAAGGTTGTCGCACCTCCTGAGAGGAAGTATTCGGTGTGGATCGGTGGGTCCATCCTGTCGTCATTGAGCACATTCCAGCAGATGTGGATCTCCAAGGGGGAATATGACGAGTCAGGCCCAACCATCGTTCATCGCAAGTGCTTC Alexandrium_minutum ATGGGGGAGGAGGAGGTCGCCGCCCTCGTCGTGGACAACGGCAGTGGCATGTGCAAGGCAGGCTTCTCGGGCGACGACGCCCCGCGTTGTGTCTTCCCCTCCATCGTGGGCCGCCCGAAGATGCCAGGCATCATGGTCGGCATGGACCAGAAGGACAGCTACATCGGCGACGAGGCGCAGAGCAAGCGTGGCGTGCTCACGCTGAAGTACCCCATCGAGCACGGCATCGTCACGAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGTTGCGCGTGGCGCCGGAGGAGCACCCGGTGCTGCTGACGGAGGCCCCCCTGAACCCCAAGGCCAACCGCGAGCGCATGACGCAGATCATGTTCGAGACCTTCAACGTGCCGGCCATGTACGTGGGCATCCAGGCGGTCCTGTCTCTCTATGCCTCCGGCCGCACCACGGGCATCGTCATGGACTCCGGCGACGGCGTCTCCCACACAGTGCCCATCTACGAGGGCTACGCCTTGCCGCATGCCATCCTCCGCTTGGACCTCGCAGGCCGTGACTTGACGGATTATTTGATGAAGATCCTCACCGAGCGCGGCTACTCGTTCACGACGACTGCGGAGCGCGAGATTGTGCGCGACGTCAAGGAGAAGCTCTGCTACATCGCCTTGGACTTCGACACGGAGATGAAGGCCGCCACCGAGAGCTCGGACAAGGAGAAGACCTACGAGCTTCCCGACGGAAACATCATCACGGTGGGCAGCGAGCGCTTCCGTTGCCCTGAGGTCCTCTTCCAGCCCAGCCTGGTGGGCAAGGAGGCGAGCGGCATCCACGACACGACCTTCCAGTCGATCATGAAGTGCGATGTCGACATCCGCAAGGACCTCTACGCGAACGTCGTGCTCTCAGGCGGCACCACCATGTTCGGGGGCATCGGCGAGCGCATGACCAAGGAGCTGACGGCCTTGGCCCCCTCGACCATGAAGATCAAAGTCGTCGCGCCTCCCGAGCGCAAGTACTCCGTGTGGATCGGTGGCTCCATCCTGTCGTCCTTGAGCACCTTCCAGCAGATGTGGATCTCCAAGACGGAGTATGACGAGTCCGGCCCCACCATCGTGCACAGGAAGTGCTTC Amphidinium_carterae ATGGCAGAGGAAGAGGTTGCAGCACTCGTTGTTGACAACGGCAGTGGCATGTGCAAGGCAGGCTTCGCGGGTGATGATGCTCCCAGGGCTGTCTTCCCATCGATTGTTGGCCGGCCGAAGATGCCTGGCATCATGGTCGGCATGGATCAGAAGGACAGCTATGTGGGTGATGAGGCGCAGAGCAAGCGGGGTGTCCTGACGCTGAAGTATCCCATTGAACACGGCATCGTGACCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTGAGAGTGGCGCCAGAAGAGCACCCTGTCTTGCTCACCGAAGCGCCGTTGAACCCCAAGGCCAACAGAGAGAGAATGACTCAGATCATGTTCGAGACATTCAATGTGCCGGCGATGTATGTGGCAATCCAAGCTGTGTTGTCCCTCTATGCCAGTGGTCGCACCACTGGCATTGTCATGGACAGTGGTGATGGTGTCTCGCACACTGTCCCGATCTACGAGGGCTACGCATTGCCCCATGCCATCTTGCGATTGGATCTAGCTGGACGTGACTTGACGGAGTACTTGATGAAGATTCTCACCGAGCGCGGCTACTCCTTCACCACCACAGCGGAAAGGGAGATTGTCCGAGACGTGAAAGAGAAGTTGTGCTACATCGCACTTGATTTCGACACAGAGCTGAAAGCAGCAACAGAGAGCTCAGACAAGGAGAAGACCTATGAGTTGCCAGATGGCAACATTATCACAGTGGGTGCTGAGCGTTTCCGTTGCCCAGAGGTGTTGTTCAACCCAAGCTTCATCGGCAAGGAGGCCAGTGGCATCCATGACACCACCTTCCAGTCGATCATGAAGTGCGATGTTGACATCCGCAAGGATTTGTATGCAAACGTGGTGTTGTCTGGCGGTACAACCATGTTCCCGGGCATTGGGGAGCGAATGACAAAGGAGCTCACAGCGCTAGCGCCATCAACCATGAAGATCAAGGTGGTAGCGCCACCAGAGCGCAAGTACTCTGTGTGGATTGGTGGCTCCATTCTGTCTTCGCTCAGCACCTTTCAGCAGATGTGGATCTCCAAGGGAGAGTATGATGAGTCTGGCCCCACCATTGTGCATCGCAAGTGCTTC Amphidinium_massartii ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------gAGGCCCAGAGCAAGCGTGGCGTTCTTACCTTGAAGTACCCCATCGAGCACGGCATCGTGACCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAATGAGTTGAGGGTCGCCCCAGAGGAGCACCCAGTGCTCTTGACCGAGGCCCCATTGAACCCCAAGGCAAACAGAGAGCGCATGACCCAGATCATGTTCGAGACATTCAACGTGCCAGCCATGTATGTGGCCATTCAGGCAGTGCTGTCGCTCTACGCCAGCGGCCGCACCACAGGCATTGTGATGGACAGCGGCGATGGTGTGTCTCACACTGTGCCCATCTACGAGGGTTATGCCTTGCCACACGCCATCCTGCGCTTGGACCTTGCTGGCCGTGACTTGACCGAGTACTTCATGAAGATCCTCACCGAGCGTGGCTACTCCTTCACCACCACCGCTGAGAGGGAAATCGTGCGCGACGTGAAGGAGAAGTTGTGCTACATTGCGACTGACTTCGACGCTGAGATGAAGGCGGCCACTGAGAGTTCCGACAAGGAGAAGACCTACGAGTTGCCGGACGGCAACATCATCACAGTCGGCGGTGAGCGATTCCGCTGCCCTGAGGTCTTGTTCCAGCCCAGCTTCATCGGCAAGGAGGCCAGTGGCATCCACGACACCACCTTCCAGTCCATCATGAAGTGCGACGTCGACATCCGTAAGGATTTGTATGCGAACGTGGTCTTGTCCGGCGGCACCACCATGTTCCCAGGCATCGGCGAGCGCATGACCAAGGAGCTCACGGCATTGGCCCCTTCCACCATGAAGATCAAGGTCGTTGCACCGCCTGAGCGCAAGTACTCCGTGTGGATCGGCGGCTCCATCCTGTCTTCACTCTCCAC------------------------------------------------------------------------- Azandinium_spinosum ATGGGTGARGAGGAGGTTGCCGCATTGGTGGTGGACAATGGCAGCGGCATGTGCAAGGCCGGTTTGGCGGGGGACGATGCCCCGCGCGCCGTTTCCCCTTCGATCGTGGGCCGCCCCAAGATCCCGGGCATCATGGTCGGCATGGACCAGAAGGACAGCTATGTGGTTGATGAGGCGCAGAGCAAGCGCGGTGTGCTCACGTTAAAATACCCCATCGAGCACGGCATCGTCACGAATTGGGATGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGTTGCGTGTCGCACCCGAGGAGCACCCTGTGCTGTTGACCGAGGCCCCGCTGAACCCGAAGGCCAACCGCGAGAGGATGACGCAGATCATGTTCGAGACGTTCAACGTGCCCGCCATGTACGTCGCGATCCAGGCCGTGCTCTCCTTGTACGCCTCCGGCCGCACCACAGGGATCGTGATGGACTCCGGCGATGGCGTCTCGCACACGGTGCCGATCTACGAGGGCTACGCCTTGCCGCACGCCATCCTTCGCTTGGACTTGGCGGGCCGGGACCTCACCGAGTACTTGATGAAGATCCTCACGGAGCGCGGCTATTCCTTCACCACCACAGCCGAGCGCGAGATCGTGCGCGACGTCAAGGAGAAGTTGTGCTACATCGCTTTGGACTTCGACACCGAGATGAAGGCGGCCACTGAGAGCTCGGACAAGGAGAAGACCTACGAGCTCCCCGATGGCAACATCATCACTGTGGGCAGCGAGCGCTTCCGTTGCCCGGAGGTGTTGTTCCAGCCGAGCTTCGTCGGCAAGGAGGCCAGCGGCATCCATGACACCACCTTCCAGTCCATCATGAAGTGCGATGTCGACATCCGCAAGGATTTGTACTCGAACGTGGTCTTGTCGGGCGGCACCACGATGTTCAGCGGCATTGGCGAGCGCATGACGAAGGAGCTCACGGCCCTCGCTCCCTCCACCATGAAGATCAAGGTCGTGGCGCCTCCCGAGCGGAAGTACTCGGTGTGGATCGGAGGCTCGATCCTCTCGTCGCTGAGCACCTTCCAGCAGATGTGGATCTCGAAGGGAGAGTATGACGAGTCCGGCCCCACCATCGTCCACAGGAAGTGCTTC Crypthecodinium_cohnii ATGGCTGACGACGAGGTTGCAGCCATCGTCTGCGACAACGGCAGTGGTATGGTGAAGTGCGGCTTTGCCGGTGACGATGCGCCTCGTGCCGTCTTCCCTTCCATTGTCGGCCGCCCCAAGATGCCGGGCATCATGGTCGGCATGGACCAGAAGGACAGCTACGTTGGTGATGAGGCTCAAAGCAAGCGCGGAGTTCTTACGCTCAAATATCCCATCGAGCACGGAATCGTGACGAACTGGGACGACATGGAGAAGATCTGGCATCACACCTTCTACAACGAGTTGCGAGTGGCGCCAGAAGAACATCCAGTCTTGCTCACCGAAGCGCCTCTCAATCCCAAAGCCAACCGTGAGCGCATGACTCAGATCATGTTCGAGACCTTCAACGTCCCCGCCATGTACGTGGCGATTCAGGCCGTCTTGTCATTGTACGCCTCCGGCCGAACCACCGGCATCGTGATGGACTCTGGCGATGGTGTCTCGCACACTGTGCCCATCTATGAGGGCTATGCCTTGCCCCACGCCATCCTGCGATTGGACTTGGCTGGCCGCGACTTGACGGAGTACATGATGAAGATCTTGACCGAGCGAGGCTACAGCTTCACCACCACCGCCGAGCGGGAGATCGTCCGAGACATCAAGGAGAAGTTGTCCTACATCGCCTTGGACTACGACTCCGAGATGAAGGTGGCCACGGAGAGCTCCGACAAGGAGAAGACCTACGAGCTCCCCGACGGCAACATCATCACTGTGGGCAGCGAGCGCTTCCGCTGCCCCGAGGTGCTCTTCAACCCCAGCTTGTTGGGCAAGGAGTCCAGCGGCATCCATGACACCACCTTCCAGTCAATAATGAAGTGCGACGTGGACATCAGGAAGGACCTCTATGCCAACGTCGTCCTGTCCGGAGGCACCACCATGTTCTCGGGCATCGGCGAGCGAATGACCAAGGAGCTCACCGCCTTGGCCCCATCCACCATGAAGATCAAGGTCGTCGCTCCTCCCGAGCGCAAGTACTCCGTCTGGATCGGGGGTTCCATCCTCTCCTCCTTGAGCACCTTCCAGCAGATGTGGATCTCCAAGGGCGAGTACGACGAGTCTGGCCCCACCATCGTGCACCGCAAGTGCTTC Cryptosporidium_parvum ATGAGTGAAGAAGAAACACAAGCATTGGTTGTTGATAATGGTTCTGGTATGGTCAAGGCAGGTGTTGCAGGTGATGACGCTCCAAGATGTGTTTTCCCATCGATCGTTGGTCGCCCAAAAATGCCAGGTGTTATGGTAGGTATGGACCAAAAGGACTGTTATGTTGGTGATGAAGCTCAATCAAAGAGAGGTATTTTGACTTTGAAATACCCAATTGAGCATGGTATTGTTACAAACTGGGAAGATATGGAGAAGATCTGGCATCATACTTTCTATAATGAATTACGTGTTGCTCCTGAGGAACACCCAGTATTATTGACTGAAGCACCAATGAACCCAAAGGTAAATCGTGAAAGAATGACTCAAATAATGTTTGAAACATTCAATGTACCAGCAATGTATGTTAATATTCAGGCTGTCTTATCATTGTATGCCTCTGGTCGTACAACTGGTATTGTTTTAGATAGTGGTGATGGTGTATCACATACTGTTCCAATCTATGAAGGTTATGCTATTCCACATGCTATTATGAGATTAGATCTAGCTGGACGTGATTTAACTGATTTCTTGATGAAGATTCTCCACGACCGTGGTTACAGCTTTACAACAACAGCTGAGAGAGAAATCGTAAGAGATATTAAGGAAAAGCTCTGCTACATTGCTTTAGATTACGAGGAAGAAATGAAGAAATCTCAAGAATCTTCTGAATTAGAGAAGACATATGAACTACCAGATGGCCATGTAATTACTGTAGGTAGTGAAAGATTCAGATGTCCTGAGGCTTTATTCCAACCAGGTTTTTTAGGTAAAGAAGCTGTCGGTATTGGTGAAACTACATTCCAATCTATCATGAAATGTGATCTTGATATCCGTAAAGACCTTTATGCCAATATTGTTTTATCTGGAGGTACAACAATGTATCCAGGTATTGGAGAAAGAATGACAAAAGAGCTCACTTCTTTGGCTCCATCAACAATGAAGATCAAGGTTGTTGCACCTCCTGAGCGTAAATACTCTGTATGGATTGGTGGTTCCATCTTATCTTCTTTATCTACTTTCCAACAAATGTGGATCACTAAGGAAGAGTATGACGAATCTGGTCCATCAATTGTACACAGAAAGTGCTTC Dinophysis_acuminata ATGGGTGAGGAGGAGGTCGCCGCACTCGTGGTGGACAATGGCAGCGGCATGTGCAAGGCCGGCTTTGCCGGGGACGACGCACCAAGGGCCGTCTTCCCCTCCATCGTAGGCCGCCCCAAGATGCCTGGCATCATGGTCGGCATGGACCAGAAGGACAGCTACGTGGGAGACGAGGCACAGAGCAAGCGCGGCGTGCTCACGCTGAAGTACCCGATCGAGCACGGGATTGTCACGAACTGGGATGACATGGAGAAAATCTGGCACCACACCTTCTACAACGAGCTCCGCGTCGCACCGGAAGAACACCCGGTGCTCCTGACCGAGGCGCCGATGAACCCGAAGGCGAATCGTGAGCGGATGACGCAGATTATGTTCGAGACTTTCAACAGCCCGGCCATGTACGTAGCGATTCAGGCTGTGCTCTCGTTGTACGCTTCCGGCCGGACCACGGGCATAGTGATGGATTCAGGCGATGGTGTTTCGCACACGGTGCCCATCTACGAGGGCTACGCATTGCCACATGCCATCCTCCGGCTTGACCTCGCCGGCAGGGATCTCACGGAGTACCTTATGAAGATCCTCACGGAGCGGGGGTATTCCTTCACAACGACGGCCGAGCGCGAGATCGTGCGCGACGTGAAAGAGAAGCTGTGCTACATCGCCCTGGACTTCGACACCGAAATGAAGGCCGCCACAGAGAGTTCCGACAAGGAGAAGACTTATGAACTTCCGGATGGGAACATCATCTCTGTGGGAAGCGAGCGCTTCAGGTGCCCCGAGGTGCTCTACCAGCCGAGCTTCATCGGGAAGGAGGCGAGCGGCATCCACGACACGACCTTCCAGTCGATCATGAAATGCGACGTTGACATCCGCAAGGATCTATACGCGAACGTGGTGCTCTCGGGGGGGACGACGATGTTCGCGGGCATCGGCGAGCGCATGACGAAGGAGCTCACGGCTCTCGCGCCTTCGACGATGAAAATCAAGGTTGTCGCGCCCCCCGAGCGGAAGTACTCCGTGTGGATAGGGGGCTCGATCCTGTCGTCCCTGAGCACCTTCCAGCAGATGTGGATCTCAAAGGGTGAGTATGACGAGTCTGGCCCGACCATCGTGCACAGGAAGTGCTTC Dinophysis_caudata ATGGGTGACGACGAGGTCGCAGCGCTCGTTGTCGACAACGGCAGCGGCATGTGCAAGGCAGGCTTCGCGGGGGATGACGCACCGCGCGCCGTGTTCCCCTCAATCGTCGGTCGTCCCAAGATGCCCGGCATCATGGTCGGCATGGACCAGAAAGACAGCTACGTGGGAGACGAGGCGCAGAGCAAGCGCGGCGTGCTCACGCTGAAGTACCCGATCGAGCACGGTATCGTGACGAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTTTACAACGAGCTTCGCGCCGCGCCTGAGGAGCATCCAGTGCTCTTGACGGAGGCCCCGATGAACCCGAAGGCGAACCGTGAGCGGATGACGCAGATCATGTTCGAGACTTTCAACAGCCCGGCCATGTACGTGGCGATCCAGGCCGTGCTCTCGCTGTATGCTTCCGGCCGGACCACAGGCATCGTGATGGACTCGGGCGACGGGGTCTCCCACACCGTGCCGATCTATGAGGGATATGCGCTGCCGCATGCCATCCTCCGGCTCGACCTCGCGGGCCGAGACCTCACGGAGTACCTGATGAAGATCCTCACAGAGCGCGGGTACTCCTTCACGACGACGGCCGAGCGCGAGATCGTCCGCGACGTGAAGGAAAAGCTGTGCTACATCGCACTGGATTTCGACACCGAGATGAAGTCCGCCACGGAAAGCTCCGACAAGGAGAAGACCTACGAGCTCCCGGACGGCAATATCATCACTGTGGGCAGCGAGCGTTTCCGGTGCCCAGAAGTCCTCTTCCAGCCAAGCTTCATCGGCAAGGAGGCGAGCGGGATCCACGACACGACGTTCCAGTCGATCATGAAGTGCGACGTGGACATCCGCAAGGACCTGTACGCGAACGTGGTGCTTTCCGGGGGCACTACGATGTTCGCAGGCATCGGCGAGCGCATGACGAAAGAGATTACGGCCCTCGCGCCGTCGACCATGAAGATCAAGGTCGTCGCGCCCCCCGAGCGGAAATACTCCGTGTGGATCGGGGGGTCGATCCTGTCGTCGCTGAGCACATTCCAGCAGATGTGGATCTCCAAGGGTGAGTACGACGAGTCTGGCCCGACCATCGTGCACAGGAAGTGCTTC Eimeria_tenella ATGGCGGACGAAGAGGTCCAAGCTCTCGTCGTGGACAACGGGTCCGGAAATGTGAAGGCTGGAGTTGCAGGTGATGATGCGCCGCGCGCAGTGTTCCCATCGATTGTTGGCCGCCCAAAGAATCCCGGCATCATGGTTGGGATGGAGGAGAAGGATTGCTATGTCGGCGATGAGGCTCAGAGCAAGCGAGGTATCCTGTCTTTGAAGTACCCCATCGAGCACGGGATCGTCACGAATTGGGATGATATGGAGAAAATCTGGCACCACACTTTCTACAACGAGTTGCGTGTTGCACCAGAAGAGCACCCGGTTCTTCTCACAGAGGCCCCTCTTAACCCGAAGGCAAATCGTGAACGAATGACTCAAATTATGTTCGAAACGTTCAACGTCCCTGCGATGTACGTCGCTATCCAGGCCGTGCTTTCGCTGTATTCTTCGGGTCGTACTACTGGTATTGTTCTGGATTCGGGAGACGGTGTGTCCCACACTGTTCCTATCTACGAAGGTTATGCACTGCCGCACGCAATGATGCGGTTGGACCTTGCCGGTCGTGACCTGACAGAGTACATGATGACAATCCTTCACGAGCGTGGATATGGCTTCACCACCACCGCCGAGAAAGA-ATTGTGCGCGACATTAAGGAGAAGCTCTGCTACATCGCGCTCGAC------GAAGAGATGAAGAATGCTGAGGACTCGAGTGACATCGAGAAGTCGTACGAGTTGCCTGATGGCAACATAATCACTGTTGGCAATGAGCGTTTCCGTTGCCCTGAGGCTCTTTTCCAGCCTTCATTCTTGGGCAAGGAGGCATCGGGTATCCATCGTACCACGTTCGACTCCATCATGAAGTGCGATGTGGATATCAGGAAGGACCTCTACGGCAATGTTGTTCTCTCTGGCGGCACAACCATGTACGAAGGCATTGGCGAGCGCCTTACCAGGGAGCTCACATCGCTGGCTCCGTCTACGATGAAGATTAAGGTTGTTGCGCCTCCTGAGCGCAAGTACAGTGTCTGGATTGGAGGGTCAATTCTGTCTTCGTTATCGACTTTCCAGCAGATGTGGATCACGAAGGAAGAATATGATGAGTCTGGGCCGAGCATCGTTCACCGCAAGTGCTTC Gymnodinium_aureolum ---------------------GCGCTCGTCGTGGACAACGGCAGCGGCATGTGCAAGGCTGGCTTCGCGGGCGACGACGCGCCTCGCGCTGTCTTTCCCTCCATCGTGGGTCGCCCGAAGATGCCTGGCATCATGGTGGGGATGGACCAGAAGGACAGCTACGTGGGTGACGAGGCGCAGAGCAAGCGTGGTGTGCTGACGCTGAAGTACCCCATCGAACACGGCATCGTGACCAATTGGGACGACATGGAGAAAATCTGGCACCACACCTTTTACAACGAGTTGCGCGTAGCGCCCGAGGAGCACCCCGTGCTGCTCACGGAGGCACCCTTGAACCCGAAGGCCAATCGCGAGCGCATGACGCAGATCATGTTCGAGACCTTCAACGTGCCCGCCATGTATGTGGCTATCCAGGCCGTGCTCTCGCTCTACGCTTCGGGGCGCACGACGGGCGTGGTCATGGACTCGGGCGACGGTGTCTCCCACACGGTGCCGATCTACGAGGGCTACGCGCTGCCTCATGCCATCTTGCGCCTAGACCTCGCGGGCCGGGACCTCACAGAGTACATGATGAAGATCCTGACGGAGCGCGGCTACTCCTTCACCACCACGGCGGAGCGCGAGATCGTGCGCGATGTGAAGGAGAAGCTTTGCTACATCGCCCTGGATTTCGACACGGAGATGAAGTCAGCCAGCGAGAGCTCTGACAAGGAGAAGACTTACGAGCTCCCCGACGGCAACATCATCACGGTGGGCAGCGAGCGCTTCCGTTGCCCCGAGGTGCTCTTCCAGCCCTCCTTCATCGGCAAGGAGTCCTCTGGCATCCACGACACCACTTTCCAGAGCATCATGAAGTGCGACGTGGACATCCGCAAGGACCTCTACTCCAACGTGGTACTCTCGGGTGGCACCACGATGTTCGCGGGCATCGGCGAGCGCATGACCAAGGAACTCACGGCCTTGGCGCCCTCGACGATGAAGATCAAGGTGGTCGCGCCGCCCGAGCGCAAGTACTCAGTGTGGATCGGAGGCTCCATCCTTTCCTCCCTCAGCACCTTCCAGCAGATGTGGATCAGCAAGAGCGAGTACGACGAGTCTGGCCCGACGATCGTCCACCGCAAGTGCTTC Gymnodinium_catenatum -----------------------------------------------------------------------------cgcgccccgtgccgttttcccatccatcgtcggccggccgaagatgccgggcatcatggtgggcatggaccagaaagacagctacgtcggcgacgaggcgcaaagcaaacgcggcgtgttgacgctcaaataccccatcgagcacggcatcgtgacgaattgggacgacatggaaaaaatctggcaccacaccttctacaacgagctccgcgtggcgccggaggagcaccccgtgttgttaaccgaggcgcccctgaacccaaaggcgaatcgcgagcgtatgacgcaaatcatgttcgagaccttcaacgtgcctgcgatgtacgttgcgatccaggcggtgctctcgctctacgcttcgggccgcaccacgggcatcgtcatggacagcggtgacggcgtctcgcacaccgtgcctatctatgagggctacgcgttgccccacgctatcctacgtttggacttggcgggccgggacttgaccgagtacatgatgaaaatcttgaccgagcgcgggtactcgtttaccaccaccgcggagcgcgaaatcgtccgcgatgtgaaagaaaaactttgctacatcgcgctggacttcgacacggaaatgaaggcagccaccgagagctccgacaaggagaaaacctatgagctccccgacggcaacatcatcaccgtgggcagcgagcgcttccgctgtccagaggttcttttccagccctctttcgttggcaaagaggcgagcggcatccacgacacgaccttccagtcaatcatgaagtgcgacgtggacatccgcaaggacctctacgcaaacgtggtgttgtcgggcggaaccaccatgttccagggcatcggcgagcgcatgacgaaagagctcacagcgctcgcgccctcgacgatgaagatcaaggtcgtggcgccgccggagcggaagtactctgtctggatcggcggctccatcttgtcgtccctcagcactttccagcagatgtggatctccaagtccgagtacgacgagtccgggccga----------------------- Hematodinium_sp ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGAAGATGACGCAGATTATGTTTGAAACTTTCAATGTTCCCGCTTTATACATCGCCATCCAGGCGGTCCTCTCCTTATACGCCTCAGGGCGCACCACCGGCATCGTGATGGACAGCGGCGACGGCGTGTCTCATACAGTGCCTATTTACGAGGGCTATGCGCTCCCTCACGCCATTTTCCGCTTGAACTTAGCTGGTCGCGATTTAACTGAATACATGATGAAAATTCTGACCGAACGCGGGTGCTCCTTCAGCACGACAGCGGAGAAGGAAATCGCGCGTGACATGAAGGAGAAGTTGTGCTACGTGGCGCTTGATTTTGAGGATGAAATGAAGAAAGCGGCGGAGTCCTGCGAAATGGAAAAAACGTACGAGTTACCAGACGGCAATGTTGTGACCGTGGGAAGCGAGCGCTTTCGCTGCCCAGAAGTGCTCTTTCAGCCTATGTTCATCGGCATGGAAGGACAAGGCATCCATACCGTCACCTTCCAGTCCATCATGAAATGCGATATTGACATCCGTAAGGAGTTATACCACAACGTCGTGCTCTCTGGTGGCACCACGATGTTCTCCGGTATTGGCGAACGCATGACAAAGGAACTCACTGCGCTGGCGCCTTCAGTGATGAAGATTAAAGTGATATGCCCGCCTGAACGCAAGTACAGCGTCTGGATCGGCGGCTCCATCCTGTCCTCCTTGACCACATTTCAGCAGATGTGGATCGCGAAACACGAGTACGAGGAAATCGGGCCCAAGATAGTCCACCGCAAGTGCTTC Heterocapsa_triquetra atggctgacgaagaggttgcggcgctcgtcgtggacaacggcagcggcatgtgcaaggctggcttcgccggtgacgatgccccgagggccgtcttcccctcgattgtgggccgtccgaagatgccaggcatcatggtgggcatggaccagaaggagagctacgtgggtgacgaggcgcagagcaagcgcggagTGCTCACCCTGAAGTACCCCATCGAGCACGGCATTGTCACGAACTGGGACGACATGGAGAAGATCTGGCACCACACGTTCTACAACGAGCTGCGCGTGGCGCCGGAGGAGCACCCGGTGCTGCTCACAGAGGCCCCGCTGAACCCGAAGGCCAACCGTGAGCGCATGACGCAGATCATGTTTGAGACCTTCAACGTGCCGGCCATGTACGTCGCGATCCAGGCCGTGCTTTCGCTGTACGCCTCAGGCCGCACCACTGGTATCGTCATGGACTCCGGCGATGGTGTCTCCCACACCGTGCCCATCTACGAGGGCTACGCGCTGCCGCACGCCATCCTGCGTCTCGACCTCGCGGGCCGCGACCTCACCGAGTACTTGATGAAGATCCTCACGGAGCGTGGCTACTCCTTCACCACGACTGCGGAGCGCGAGATTGTCCGCGATGTGAAGGAGAAGCTCTGCTACATTGCGCTGGACTTCGACACCGAGATGAAGTCCGCCACGGAGAGCTCGGACAAGGAGAAGACCTACGAGCTGCCGGACGGCAACATCATCACGGTGGGCAGCGAGCGCTTCCGCTGCCCGGAGGTGCTCTTCCAGCCGAGCTTCGTGGGCAAGGAGGCCAGCGGCATCCACGACACGACCTTCCAGTCCATCATGAAGTGCGATGTGGACATCCGCAAGGACCTCTATGCCAACGTGGTGCTCTCTGGCGGCACCACGATGTTCACGGGCATCGGCGAGCGCATGACCAAGGAGCTCACAGCCCTGGCGCCCTCCACCATGAAGATCAAGGTCGTGGCCCCGCCGGAGCGCAAGTACTCCGTCTGGATCGGCGGCTCCATCCTCTCCTCCCTCAGCACCTTCCAGCAGATGTGGATCTCCAAGGGAGAGTACGACGAGTCCGGCCCCaccatcgtccacaggaagtgcttc Karenia_brevis ATGTCTGAGGAGGAGGTGGCAGCGCTCGTTGTGGACAATGGCAGTGGGATGTGCAAGGCTGGCTTCGCTGGGGATGATGCACCACGTGCTGTCTTCCCTTCTATTGTGGGCCGTCCCAAGATGCCAGGCATCATGGTTGGCATGGACCAGAAAGACAGCTATGTTGGTGACGAGGCACAGAGCAAGCGCGGCGTGCTTACCTTGAAGTATCCCATTGAGCATGGAATTGTGACCAATTGGGATGACATGGAAAAGATTTGGCATCACACTTTCTACAATGAGTTGCGCGTCGCGCCTGAGGAGCACCCAGTGTTGCTCACAGAGGCACCTCTCAATCCCAAGGCAAACCGGGAGCGCATGACACAGATCATGTTCGAGACTTTCAATGCCCCGGCCATGTATGTGGCCATTCAGGCGGTGCTCTCACTCTATGCTTCTGGCCGCACCACAGGCATTGTGATGGACAGCGGCGATGGAGTTTCACATACAGTGCCCATCTATGAAGGCTATGCGTTGCCGCACGCCATCCTGCGCTTGGACCTTGCAGGCCGCGACCTCACTGAATACCTCATGAAGATCCTTACCGAGCGTGGCTATTCTTTCACAACCACCGCTGAGCGTGAGATCGTTCGTGATGTCAAAGAAAAACTCTGCTACATTGCGCTGGACTTTGACACTGAGATGAAGGCAGCCACTGAAAGTTCTGATAAAGAGAAGACCTATGAACTACCTGATGGCAACATCATCACAGTTGGTGGTGAACGTTTCCGCTGCCCTGAAGTTCTCTTCCAGCCGAGCTTTGTGGGCAAAGAGGCCAGTGGCATCCATGACACAACGTTTCAGTCAATTATGAAGTGCGATGTTGATATCAGGAAGGACCTTTACAGCAATGTTGTCCTCAGCGGTGGCACAACCATGTTTGCAGGCATTGGTGAGCGCATGACCAAAGAACTTACAGCCCTCGCACCCTCAACAATGAAGATCAAGGTGGTAGCTCCTCCTGAGCGAAAGTACTCCGTCTGGATTGGCGGGTCCATCCTCTCGTCGCTCAGCACTTTCCAGCAGATGTGGATCTCCAAGGGTGAGTATGATGAATCAGGCCCAACAATCGTGCACCGTAAGTGCTTC Karenia_mikimotoi -----------------------------------------------------------------------------cgcgccacgtgccgtcttcccttcgattgtgggccgtcccaagatgccaggcatcatggttggaatggaccagaaggacagctatgtgggtgacgaggcacagagcaagcgcggtgtgctgacgctcaaatatcccatcgagcatggcattgtaacaaattgggatgacatggagaaaatttggcaccatactttctacaacgaactccgtgtcgcacccgaggagcacccggtcctgctgacagaggcaccgctcaaccccaaggcaaatcgtgagcgcatgacgcaaatcatgtttgagactttcaatgctccagctatgtatgtcgccatccaggccgtcctctcgctctacgcttctggccgcaccactggcattgtgatggacagtggcgatggggtctcacacacagtgcccatctatgagggctacgcactgccgcatgccatcctgcgcttggacctcgcgggccgcgacctcactgaatatttgatgaagattctgacagagcgtggctattctttcacaaccaccgccgagcgcgagattgtgcgcgatgtcaaagagaaactctgctacattgcacttgatttcgacaccgagatgaaggctgccactgaaagctctgacaaggagaagacttatgaacttcctgatggcaacatcatcacagttggtggcgagcgtttccgctgtcccgaggtgcttttccagccaagcttcgttgggaaagaagcaagcggcattcatgacacaacattccagtccatcatgaaatgcgatgtcgacatcagaaaggacctctacagcaatgttgtcctcagtggtggcacaaccatgttcgccggcattggtgagcgtatgacaaaagagttgacagctttggcaccgtcaaccatgaagatcaaggttgtagctcctccggaacgcaagtattctgtgtggattgggggctctatcctctcttctctcagcactttccagcagatgtggatctccaagggagaatatgatgaatcagggccga----------------------- Karlodinium_veneficum ATGGGCGAAGAAGAAGTTGCCGCACTCGTCGTGGACAATGGCAGTGGTATGTGCAAAGCAGGTTTTGCTGGTGATGATGCCCCACGTGCCGTCTTCCCTTCCATCGTGGGACGTCCTAAGATGCCAGGTATCATGGTTGGAATGGACCAGAAGGACAGCTATGTGGGTGACGAGGCGCAGAGCAAGCGAGGTGTCTTGACTTTGAAATATCCTATCGAGCATGGTATTGTGACGAATTGGGATGACATGGAAAAGATTTGGCATCACACCTTCTACAATGAGCTGCGTGTGGCACCTGAGGAGCACCCTGTGCTATTGACAGAGGCTCCTTTGAACCCGAAGGCCAACCGGGAGCGCATGACACAAATCATGTTTGAGACTTTCAATGCGCCAGCTATGTATGTGGCGATTCAGGCAGTGTTGTCGCTTTATGCCTCAGGCCGTACCACTGGCATTGTGATGGACAGTGGCGATGGAGTTTCGCACACAGTACCAATCTATGAGGGCTATGCGCTTCCACACGCAATCTTGCGTCTTGATTTGGCTGGCCGCGACCTCACAGAGTATTTGATGAAGATTCTCACTGAGCGTGGCTATTCCTTCACCACCACTGCCGAACGTGAGATTGTGCGCGATGTGAAGGAGAAGTTGTGCTACATCGCACTCGATTTCGATACTGAGATGAAGGAAGCGGCTGAAAGTTCAGACAAAGAGAAAACCTACGAGCTTCCAGATGGTAATATCATCACTGTCGGTGGTGAGCGTTTCAGGTGCCCTGAAGTATTGTTCCAACCAAGCTTCATTGGTAAGGAGGCTAGCGGTATCCATGACACAACTTTCCAGTCGATTATGAAATGTGATGTTGACATCCGTAAAGACTTGTACAGCAATGTGGTGCTTTCTGGTGGCACCACGATGTTCGCTGGCATTGGTGAGCGCATGACCAAGGAGCTCACAGCTTTGGCGCCTTCCACAATGAAGATCAAGGTTGTAGCACCGCCTGAGCGCAAGTACTCAGTGTGGATTGGGGGTTCTATCCTTTCGTCCCTCAGCACCTTCCAGCAGATGTGGATCTCGAAAGGAGAATATGATGAGTCTGGTCCAACAATTGTCCACAGGAAGTGCTTC Lepiodinium_chlorophorum ---------------------gcacttgtcgtcgacaatggcagtggtatgtgcaaggcaggcttcgctggggatgatgcaccacgagcggtctttccatcaattgttggccgtccgaagatgcccggcattatggttggcatggaccagaaggatagctacgttggcgacgaggctcagagcaagcgcggtgtcttgacgctgaaatatcccatcgagcatggcattgtcacgaattgggacgacatggagaaaatttggcaccacacgttctacaatgaactccgcgtggcgcccgaggaacatccagtgcttctcacagaagcgcctttaaaccccaaggcgaacagagagcgaatgacgcagatcatgttcgagaccttcaacgttccagctatgtatgtggccattcaggcggtgctatcgctgtacgcttcaggtcgaactacgggcatcgttatggattctggcgatggcgtgtcgcatactgtacccatctacgaaggctatgctctaccccacgccatacttcgactggacctcgctggtcgtgacctcaccgagtacatgatgaagattttgactgaacgtgggtattcctttacgaccaccgcggaacgggagatcgttcgcgatgttaaagagaagctttgctacatcgctctggacttcgacacggagatgaaggcagccaccgagagctctgacaaggagaagacctacgagctccccgacggcaacatcatcacggtgggcagcgagcgcttccgttgcccagaggtgcttttccagccctctttcgttggcaaagaggccagtggcatccacgacaccaccTTCCAGTCCATAAtgAAAtgCGAAgtgGATATTCGCAAAGATCTTTaCgcaaACGtGGTGCTTTCGGGTGGGacCACCATGTTCACGGGTATCGGTGAGCGCATGACTAAAGAATTAACAGCTCTTGCGCCTTCCACCATGAAGATCAAAGTTGTGGCTCCACCAGAACGAAAATACTCAGTCTGGATCGGAGGATCGATCTTGTCTTCATTGTCCACCTTCCAGCAGATGTGGATCTCAAAGGGCGAGTATGATGAGTCTGGCCCAACAATCGTGCACCGCAAGTGCTTC Lingulodinium_polyedrum ATGGGCGACGAGGAGGTGGCCGCACTTGTTGTGGACAACGGCAGTGGCATGTGCAAAGCGGGCTTTGCGGGTGATGACGCACCGCGAGCTGTTTTCCCCTCCATTGTCGGCCGCCCAAAGATGCCTGGCATCATGGTCGGCATGGACCAAAAGGACAGTTACATCGGGGACGAGGCGCAGAGCAAGCGCGGCGTGCTCACACTCAAGTATCCGATAGAACATGGCATTGTCACGAACTGGGACGACATGGAAAAGATCTGGCACCACACTTTCTACAACGAGCTTCGTGTGGCGCCAGAAGAACACCCTGTGCTCTTGACCGAAGCTCCGCTGAACCCAAAAGCAAATCGGGAGCGTATGACGCAGATCATGTTTGAGACATTCAATGTGCCAGCGATGTACGTCGCCATCCAAGCTGTACTGTCGCTGTACGCATCGGGCCGCACCACGGGCATAGTCATGGACTCGGGTGACGGAGTGTCCCACACCGTGCCGATTTACGAGGGCTACGCGCTGCCGCACGCAATCCTACGTCTTGACCTTGCAGGTCGCGATCTCACAGACTATCTCATGAAAATACTCACGGAGCGCGGTTACTCCTTCACAACCACGGCCGAGCGTGAGATCGTGCGTGACGTCAAAGAAAAGCTCTGCTACATTGCACTGGACTACGACAGCGAGATGAAGGCAGCTACCGAGAGTTCCGATAAGGAAAAAACATACGAGTTGCCGGACGGGAACATCATCACCGTGGGCAGTGAGCGCTTCCGCTGCCCGGAAGTGCTTTTCCAGCCGAGTTTGGTCGGGAAGGAGGCCAGCGGTGTCCACGATACGACGTTCCAGTCTATCATGAAGTGCGATGTCGATATCCGCAAGGATCTTTATGCGAACGTGGTGTTGTCGGGCGGAACCACAATGTTCATTGGCATAGGCGAGCGCATGGCGAAGGAGCTGACAGCACTGGCGCCTTCCACGATGAAGATCAAGGTTGTGGCGCCACCAGAGCGCAAGTACTCCGTGTGGATCGGGGGATCCATTCTTTCGTCTCTCAGCACGTTCCAGCAAATGTGGATCACGAAGACTGAGTATGACGAGGCTGGACCGTCCATTGTCCACAGGAAGTGCTTT Noctiluca_scintillans ATGGCGGAAGAGGAAGTGGCCGCGCTCGTCGTCGACAACGGCAGTGGCATGTGCAAGGCTGGTTTTGCTGGTGACGATGCACCTCGCGCTGTGTTCCCTTCGATTGTCGGCAGGCCCAAGATGCCAGGCATCATGGTTGGTATGGACCAGAAGGACAGTTATGTCGGTGACGAGGCGCAGAGCAAGCGCGGCGTTTTGACGTTGAAGTATCCCATTGAGCACGGTATCGTCACGAATTGGGACGACATGGAAAAAATCTGGCATCACACATTCTACAACGAACTCAGGGTTGCGCCTGAAGAGCATCCAGTTTTGCTCACGGAAGCTCCCTTGAACCCCAAGGCCAACAGAGAGCGCATGACTCAGATCATGTTTGAGACTTTCAACGTGCCCGCCATGTACGTGGCGATCCAGGCTGTCTTGTCTCTGTACGCTTCGGGACGGACGACGGGCATCGTGATGGATTCTGGTGACGGTGTGTCGCACACAGTGCCCATCTACGAAGGTTACGCCCTGCCTCACGCCATCCTTCGTTTGGATTTGGCTGGCCGTGATCTTACAGAGTATCTGATGAAGATCCTCACTGAGCGCGGGTACTCTTTCACCACCACCGCAGAGAGGGAGATTGTTCGGGATGTCAAAGAGAAACTTTGCTACATTGCTTTAGATTACGACACAGAGCTCAAATCGACGGCGGAAAGTTCAGACAAGGAGAAGACCTACGAGCTCCCAGACGGAAACATCATCACTGTCGGTGCCGAACGTTTCCGTTGTGCGGAAGTATTGTTTCAGCCAAGTTTCATAGGTAAAGAAGCCAGTGGAATCCATGACGCTTCTTTCCAGAGCATCATGAAGTGCGACGTTGACATTCGCAAGGATTTGTACGCCAATGTCGTGTTGTCAGGTGGCACGACCATGTTCCAAGGGATTGGTGAGCGCATGACGAAGGAATTGACGGCGTTGGCTCCATCCACGATGAAGATCAAGGTGGTTGCTCCACCAGAGAGGAAGTACTCGGTATGGATTGGAGGGTCTATCTTGTCTCCCCTCAGCACGTTCCAGCAGATGTGGATCTCGAAGGGCGAGTACGATGAATCTGGCCCGACCATCGTCCACAGGAAGTGCTTC Oxyrrhis_marina ATGGCCGAGGATGAGGTTGCCGCTCTGGTTGTGGACAACGGGTCCGGGATGTGCAAGGCCGGGTTTGCCGGTGACGACGCACCCCGTGCTGTGTTCCCCTCCATCGTGGGACGACCGAAGATGCCGGGAATCATGGTCGGGATGGACCAGAAGGACAGCTATGTCGGGGATGAAGCACAGAGCAAGCGTGGGATCCTGACTTTGAAGTATCCTATTGAGCACGGGATCGTCACCAACTGGGATGACATGGAGAAAATATGGCATCATACATTCTACAACGAGTTGAGGGTGGCCCCTGAGGAGCACCCGGTGTTGTTGACTGAAGCTCCGTTGAACCCGAAGGCGAACCGTGAGCGTATGACGCAGATCATGTTTGAGACTTTCAACGTGCCTGCGATGTACGTGCAGATCCAGGCTGTGTTGTCGTTGTATGCTTCTGGCCGTACCACGGGAGTGGTGATGGACAGTGGTGATGGAGTGTCTCACACTGTGCCGATCTATGAAGGGTATGCTTTGCCTCATGCGATCCTGCGTTTGGACTTGGCTGGACGTGACTTGACGGAGTACATGATGAAGATCTTGACGGAGCGCGGATATTCGTTCACGACCACAGCAGAGCGTGAGATTGTGCGTGATGTGAAGGAGAAGCTGTGCTATGTGGCACTGGATTTTGATTCGGAAATGAAGGCTGCTAGCGAAAGCTCTGACAAGGAGAAGACCTACGAGCTTCCGGATGGGAACATCATCACGGTGGGGAACGAGCGATTCCGGTGCTCTGAGGTGCTGTTCCAGCCGAGCTTTCTTGGGAAGGAATCCAGCGGTATTCACGACACGGTGTTCAAGTGTGTGATGCAGTGCGATGTTGATATTCGTAAGGATTTGTACGCGAACGTGGTGCTGTCTGGGGGGACGACTATGTTTCCGGGGATCGGAGAGCGGATGACGAAAGAATTGACGGCTTTGGCGCCATCTACGATGAAGATCAAGGTGGTGGCTCCTCCGGAGCGGAAGTATTCGGTGTGGATCGGTGGATCGATCTTGTCGTCATTGTCTACATTCCAGCAGATGTGGATCTCCAAGCAGGAGTATGATGAGAGTGGGCCGACGATTGTGCACAGGAAGTGCTTC Pentapharsodinium_dalei ATGGCGGATGATGAGGTCGCCGCGATTGTGTGCGACAACGGCAGCGGCATGGTGAAGTGCGGCTTCGCCGGCGACGACGCGCCGCGCGCGGTGTTCCCTTCGATCGTGGGCAGGCCGAAGATGCCGGGCATCATGGTTGGTATGGACCAGAAGGACAGCTACGTTGGGGACGAGGCGCAGAGCAAGCGCGGCGTGCTGACGCTCAAGTATCCCATCGAGCACGGTATTGTGACTAATTGGGACGACATGGAGAAAATCTGGCACCACACGTTCTACAACGAGCTCCGCGTGGCGCCTGAGGAGCACCCGGTGCTGCTCACGGAGGCCCCTCTGAACCCGAAGGCGAACCGCGAGCGCATGACGCAGATCATGTTCGAGACCTTCAACGTGCCGGCCATGTACGTGGCCATCCAGGCCGTGCTGTCGCTCTACGCCTCTGGCCGCACCACGGGCATTGTCATGGACTCTGGCGACGGCGTCTCGCACACCGTGCCTATCTACGAGGGATACGCGCTGCCTCATGCCATCTTGCGCTTGGACCTGGCAGGCCGAGACCTCACGGAGTACATGATGAAGATCCTCACGGAGCGCGGCTACTCCTTCACCACCACAGCGGAGCGCGAGATCGTGCGGGACGTGAAGGAGAAACTGTCGTACATCGCGTTGGACTTCGACACGGAGATGAAGGCAGCCACGGAGAGCTCGGACAAGGAGAAGACCTACGAGCTGCCCGACGGCAACATCATCACCGTGGGCAGCGAGCGCTTCCGCTGCCCGGAGGTGCTCTTCCAGCCGAGCTTTGTGGGCAAGGAGGCGAGCGGCATCCACGACACCACCTTCCAGAGCATCATGAAGTGCGACGTGGACATCCGCAAGGACCTCTACGCAAACGTGGTGCTGTCCGGAGGCACCACCATGTTCGCGGGCATCGGCGAGCGCATGACCAAGGAGCTCACAGCTCTGGCGCCCTCCACCATGAAGATCAAGGTAGTGGCGCCGCCGGAGCGCAAGTACTCGGTGTGGATTGGCGGTTCCATCCTCTCTTCCTTGAGCACCTTCCAGCAGATGTGGATCTCAAAGAGCGAGTACGACGAGTCGGGCCCCACGATTGTGCACAGGAAGTGCTTC Perkinsus_marinus ATGGCTGACGAGGAAGTTGCCGCTTTGGTCATCGATAACGGTAGTGGTATGTGCAAGGCTGGATTCGCCGGTGATGATGCTCCTCGTAGCGTCTTCCCCTCAATCGTCGGCCGACCCAAGATGCCCGGCATCATGGTTGGTATGGACCAGAAGGACTCCTATGTTGGTGATGAGGCTCAGTCCAAGCGTGGTATTTTGACCTTGAAGTACCCGATTGAGCATGGTATCGTCACCAACTGGGATGATATGGAGAAAATCTGGCATCACACTTTCTACAACGAACTGCGTGTCTCTCCCGAGGGACACCCAGTCCTACTCACAAAGGCTCCTCTCAATCCTAAGGCTAATCGCGAGCGCATGACTCAGCTCATGTTCGAAACCTTCAACGTGCCGGCTATGTATGTCCAGATTCAGGCCGTGCTGTCTCTGTATGCCTCCGGTAGAACCACCGGTATCGTTATGGATTCCGGTGATGGTGTTAGTCACACTGTTCCCATCTATGAGGGTTATGCTCTCCCTCATGCTATTCAGAGGCTCGATCTTGCTGGCCGCGATTTGACTGAGTTCATGATGAAAATCTTGACGGAGCGCGGGTACACATTCACTACTACGGCTGAGAGAGAGATCGTCCGTGACATCAAGGAGAAGTTGTCCTACGTCGCACTTGACTTCGACACTGAGATGAAGGCCGCTGCTGAAAGTAGTGAGAAGGAGAAAACGTACGAGTTGCCCGACGGCAACATTATTACTGTTGGTAACGAACGCTTCCGCTGTCCAGAAGTACTCTTCCAACCCACTTTCATCGGTAAGGAGGCCAGCGGCATCCACGACACCACTTTCCAGTCTATCATGAAATGCGACGTGGATATCAGGAAGGATCTGTATGCCAATGTGGTCCTTTCTGGAGGGACTACGATGTTCAATGGTATTGGTGAGAGGATGACTAAGGAGCTCACTGCTCTGGCCCCCTCTACTATGAAGATCAAGGTCGTAGCTCCTCCTGAGCGCAAGTACTCTGTGTGGATTGGAGGCTCTATTTTGTCCTCTTTGTCGACCTTCCAGCAGATGTGGATTTCTAAGCAGGAGTATGACGAGTCTGGACCTACTATTGTGCATCGTAAATGCTTC Pfiesteria_piscicida -----------------------------------------------------------------------------tgctcccagagctgtgttccccagtattgtcggccgcccgaagatgcccggcatcatggtcggcatggaccagaaggacagctacgtcggcgatgaggctcagagcaagcgcggagtgctgacgttgaagtacccgatcgaacacggaattgtaacgaattgggacgatatggagaagatctggcatcacacgttctacaatgagctgcgtgtggctccggaagagcatccggtgctcttgacggaggctccgctgaacccgaaggccaaccgcgaacggatgacgcagatcatgtttgagacattcaatgttcctgccatgtacgtggccatccaggccgtgctgtctctgtacgcctcgggccgcaccaccggcatcgtcatggactcaggcgacggcgtgtcccacacggtgcccatctacgagggctacgcgctgccgcacgcgatcttgcgcctggacttggccggccgcgacctgacggagtacatgatgaagatcttgaccgagcgcggctactccttcacgaccacggcggagcgagagattgtccgcgatgtcaaggagaagctctcctacatcgcgctggacttcgacagcgagatgaaggccgcgacggagagcaacgagaaggagaaaacctacgagctgccggacggcaacgtcatcaccgtcggcagcgagcgcttccgctgccccgaggtgctgttccagcccagctttatcggcaaggaggcttcgggcattcatgacacgacctttcaatcaatcatgaaatgtgatgtcgacatccgcaaggatctctacgccaacgtggtgctgtccggcggcacgacgatgttcgagggcatcggcgagcgcatgaccaaggagctgacggccctggccccctcgaccatgaagatcaaggtcgtcgccccgccggagcgcaagtactccgtctggatcggaggttcgatcctgtcctccttgagcaccttccagcagatgtggatctctaagggcgagtacgatgagtctggcccga----------------------- Polarella_glacialis ATGGGTGAGGAGGAGGTTGCCGCTCTGGTGGTTGACAATGGCAGCGGCATGTGCAAGGCAGGCTTCGCAGGTGACGATGCTCCACGGGCTGTCTTTCCTTCCATCGTGGGAAGGCCCAAGATGCCTGGCATCATGGTGGGCATGGACCAGAAGGACAGCTACATCGGTGATGAGGCGCAGAGCAAGCGTGGTgtgctgACgCTCaagtacCCCATTGAGCACGGCATCGTCACCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTCCGAGTGGCTCCAGAGGAGCACCCAGTGCTCCTGACTGAGGCTCCCTTGAACCCCAAGGCCAACCGCGAGCGCATGACGCAGATCATGTTCGAGACCTTCAACGTGCCGGCCATGTATGTGGCAATCCAGGCTGTGCTGTCTCTCTACGCCTCGGGCCGCACCACCGGCATCGTGATGGACAGTGGAGATGGCGTGTCCCACACCGTGCCCATCTACGAGGGCTATGCGCTGCCGCACGCCATTCTGCGTTTGGACCTGGCCGGCCGCGATCTGACCGAGTACCTGATGAAGATCCTCACAGAGCGCGGCTACTCCTTCACCACCACTGCTGAGCGTGAGATCGTGCGCGACGTGAAGGAGAAGCTGGCCTACATTGCCTTGGATTTCGACTCCGAAATGAAGGCTGCCACGGAGAGCAGCGACAAGGAGAAGACCTACGAGCTGCCAGACGGCAACATCATCACTGTGGGCAGCGAGCGCTTCCGCTGCCCAGAGGTGCTCTTCCAGCCAAGCTTTGTGGGCAAGGAGGCCAGCGGCATCCATGACACCACTTTCCAGAGCATCATGAAGTGCGATGTGGACATCCGCAAGGACCTCTACGCCAACATCGTGCTCTCCGGCGGCACCACCATGTTCCAGGGCATTGGCGAGCGCATGACCAAGGAGCTCACGGCTCTGGCACCTTCCACCATGAAGATCAAGGTCATTGCTCCTCCTGAGCGCAAGTACTCCGTGTGGATCGGAGGCTCCATTctgtcgtccctcAGCACTTTCCAGCAGATGTGGATCTCCAAGGGCGAGTACGACGAGAGCGGCCCTACCATTGTGCACCGCAAGTGCTTC Prorocentrum_lima -----------------------------------------------------------------------------tgcacctcgggccgtatttccctcaattgtgggccgccccaagatgccaggcatcatggtgggaatggaccagaaagattcgtacgtcggcgatgaggcgcagagcaagcgcggcgttttgaagctaaagtatccgatcgagcatgggatcgtcacgaattgggatgatatggagaaaatttggcaccatactttctacaatgagttgcgagtttctccagaagagcacccagtcttgctcacggaggccccgttgaaccccaaggccaatcgggaacgtatgactcaaatcatgttcgagaccttcaatgtccctgctatgtatgttgcgatccaggcggtcttgtctttgtacgcgtccggtcggaccaccggcgtcgtcatggactcgggcgacggagtctcgcacacggttcccatctacgaaggctacgcactgccgcatgccatcctccgacttgacttggcaggacgggacctcaccgagtacctcatgaagatcctcacagaacgtggctactcattcaccaccacggcggagcgtgagattgtgcgcgacgtgaaggaaaagctttgttatgcatcccttgattttgacacagagatgaaaacggcgacagaaagctccgacaaggagaagacctacgagttgccggatggcaacatcatcacggtggggagcgagcgcttccgttgcccggaggtgctcttccagcccagcttcgtgggcaaagaggccagcggcgtacatgatacgaccttccagtccatcatgaagtgcgatgtggacatccggagggacttgtacgcgaatgtggtgctctccggtggtactaccatgttcaaaggtattggggagcgcatgacgaaagagctcactgctctcgcaccttcaactatgaaagtcaaagttgtcgcgccaccagagcgcaagtactccgtctggattggtggatccatcctctcctcgctcagcaccttccagcagatgtggatctcaaagggggagtacgatgagtctggcccga----------------------- Prorocentrum_micans -----------------------------------------------------------------------------tgcgccccgcgcggtgttcccatcgatcgtgggccggcccaagatgcccggcatcatggtcggcatggaccagaaggacagctacgtcggcgacgaggcgcagagcaagcgtggcgtgttgacccttaagtacccaatcgagcacggaattgtgaccaactgggacgacatggagaagatctggcaccacaccttctacaacgagctccgcgtggcgccggaggagcaccccgtgctgctgactgaggcgccactgaacccgaaggcgaaccgcgagcgcatgacgcagatcatgttcgagacgttcaacgtgcccgcgatgtacgtcgcgatccaggccgtgctctccctgtacgcttcgggccgcaccaccggcatcgtcatggactctggggatggggtctcccacaccgttccgatctacgagggatacgccctgccccacgccatcctgcgcctggacctggctggccgtgacctcaccgagtacctcatgaagatcctcacggagcgcggctactcgttcacgaccacggcggagcgcgagatcgtgcgggacgtcaaggagaagctttgctacatcgccctggacttcgacacggagatgaaggccgccaccgagagctcggacaaggagaagacctatgagctacccgacggcaacatcatcacggtggggagcgagcgcttccgttgccccgaggtgctgttccagccaagctttgtgggcaaggaggccagcggcatccacgacaccaccttccaatccatcatgaagtgcgacgtcgacattcgcaaggatctctacgcgaacgtggtgctgtccggcggaaccacgatgttcacgggcatcggcgagcgcatgacgaaggagctgaccgcgctggcgccctcaaccatgaagatcaaggtcgtcgcgccccccgagcgcaagtactcggtatggatcggcgggtccatcttgtcctcgctgagcacgttccagcagatgtggatctccaagggcgagtacgacgagtccggcccca----------------------- Prorocentrum_minimum AGAATGGCCTCTGAGATCACTGCCCTCGTGGTGGACAACGGCAGCGGCATGTGCAAGGCTGGCTTCTCAGGAGCCGATGCGCCGAGGACCGTCTTTCCATCGATCGTGGGTCGACCCAAGATGCCCAGCATCATGGTGGGGATGGATACTCGCGACAGCTACGTAGGTGATGAGGCCATGAGCAAGCGTGGCATCCTCTCTCTGAGGTACCCCATCGAGCACGGGATGGTGACCAACTGGGAGGACATGGAGAAGATCTGGCACCACACGTTCTACAACGAGCTTCGGGTGAACCCCGACGAGTATCCTGTCCTGTTGACCGAAGCACCATTGAATCCCAAGGCAAATCGAGAGCGCATGACGCAGATCATGTTCGAGACCTTCAATGTGCCGGCTGTGTACGTCGCTATCCAGGCTGTGCTGTCGCTGTACGCCTCCGGGCGCACTACCGGGATCGTGATGGACTCGGGCGACGGCGTGTCCCACACCGTCCCAGTGTACGAGGGGTTCGCCTTGCCGCACGCCATCGAGCGCCTGGATCTGGCCGGTCGGGACCTCACCGAGTACCTGACCAAGATCCTCACCGAGCGCGGCTACTCGTTCACGAGCTCGGCCGAGAAGGAGATCATCCGGGACGTGAAGGAGAAGCTCTGCTACGTAGCCATGGACTTCGACGCCGAGCTCAAGGCGGCCACCGAGAGCTCGGACCGGGAGAGGACCTACGAGCTCCCCGACGGCATCCTCATCGCTGTGGGCAGCGAGCGCTTCCGGTGCGCAGAGGTCCTTTTCCAGCCGAGCTTGGTCGGCAAGGAGGCGAGCGGGGTTCACGAGGCCACCTTCAGGTCCATCATGCAGTGCGACATCGATGTGCGCAGGGCACTGTATGCGAACGTGGTGCTCTCCGGGGGGACCAGCATGTTCCCGGGCATGGGGGAGCGGATGACGAGGGAGCTGAGCGCTCTGGCGCCACCCACGATGAAGGTCAAGGTCATCGCGCCGCCGGAGCGAAAATATTCCGTGTGGATCGGAGGCTCGATCTTGTCCTCCCTGAGCACCTTCCAACAGATGTGGGTCTCGAGGGAGGAGTACGACGAGTCTGGGCCCGGCATCGTGCACCGCAAGTGCTTC Pseudopfiesteria_shumwayae -----------------------------------------------------------------------------tgcccccagagctgtttttccctcaattgtgggcaggccgaagatgccgggcatcatggtcggcatggaccagaaggactcctacgtcggcgacgaggcgcagtccaagcgcggcgtgctgaccttgaagtaccccatcgagcacggcatcgtgacgaattgggatgacatggagaagatctggcaccatacgttctacaacgagttgcgagtcgctccggaggagcacccggtcttgctgaccgaggctccattgaacccgaaagcgaaccgcgagcgcatgacgcagattatgttcgagacgttcaatgtgcctgcgatgtacgtggccatccaggcggtgctctcgctctacgcttccggccgcaccacgggaatcgtggtggactccggcgacggcgtgtcgcacaccgtgcccatctatgagggctacgccttgccgcacgcgatcttgcgcttggacttggcgggtcgagacttgaccgagtacatgatgaagatcttgacagagcgcggctactccttcacgacgacggcggagcgcgagatcgtccgcgacgtcaaggagaagttgtcctacatcgccttggactttgacagcgagatgaaggccgccacggagtcgaacgacaaggagaagacctacgagctgccggacggcaacgtcatcacggttggcagcgagcgcttccgctgcccggaggtgctcttccagcccagcttcatgggcaaggaggcatccggcatccacgacacgaccttccagtcgatcatgaagtgcgatgtcgacatccgcaaggacctctacgcaaacatcgtgctctcgggcggcaccacgatgttcgacggcatcggcgagcgcatgacgaaggagctgacggccttggctccgtcgacgatgaagatcaaggtcgtcgcaccgccggagcggaagtactcggtctggatcggcggctccatcttgtcctcgctgagcaccttccagcagatgtggatctccaagggcgagtacgacgagtccggcccca----------------------- Scrippsiella_trochoideae atgggagaggaggaggttgcagcccttgttgtggacaacgggagtggcatgtgcaaggcggggtttgccggggatgatgccccgcgtgcgtttttcccttcaATAGTTGGCcGCCCAAAGAtGCCAGGAATCATGGTGGGCATGGaCCAGAAGgacAGCTACATAGGGGACGAGGCTCAGAGTAAGCGCGGAGtGCTCACACTGAAGTACCCCATTGAGCACGGCATTGTCACGAACTGGGATGACATGGAGAAGATTTGGCACCATACGTTCTACAACGAGCTCAGGGTCGCGCCCGAGGAGCACCCTGTCTTGCTGACGGAGGCGCCCCTGAACCCAAAGGCGAACCGCGAGAGGATGACGCAGATCATGTTTGAGACGTTCAACGTTCCTGCGATGTACGTTGCAATCCAGGCTGTTCTGTCGCTCTACGCGTCGGGCCGCACCACAGGTATTGTCATGGATTCCGGCGACGGCGTCTCACACACTGTGCCTATCTATGAAGGGTATGCCTTGCCGCACGCCATCCTCCGCTTGGATCTCGCAGGCCGTGACCTCACAGACTACCTCATGAAGATCCTCACGGAACGGGGATATTCCTTCACGACGACAGCTGAGAGAGAAATCGTTCGCGATATCAAGGAGAAACTCTGCTACATTGCATTGGATTTTGACACCGAGATGAAGTCGGCCACGGAGAGCTCGGACAAGGAGAAGACATATGAGCTTCCAGACGGAAACATCATCACGGTGGGCAGCGAGCGATTCCGTTGTCCGGAGGTTCTCTTCCAGCCGAGTCTGATCGGAAAGGAGGCTAGTGGCATTCATGACACCACGTTCCAGTCCATCATGAAGACGGACGTCGACATCCGCAAAGACCTCTATGCAAACGTCGTTCTTTCTGGCGGCACAACCATGTTTGGTGGCaTCGGCGAGCGCATGACCAAGGAGTTGACAGCTCTGGCCCCCTCCACCATGAAGATCAAGGTTGTCGCACCTCCTGAGAGGAAGTATTCGGTGTGGATCGGCGGGTCCATCTTGTCGTCTTTGAGCACATTCCAGCAGATGTGGATc------------------------------------------------------ Symbiodinium_c3 atgggtgacgaagaagttgccgcgcttgtggtggacaacggaagcggaatgtgcaaggccggctttgcaggtgatgatgctccacgagcagttttcccatccattgttggccggccaaagatgcctggaatcatggttggcatggaccagaaggacagctatgtaggagacgaggcgcagagcaagcgaggtgtgctgaccttgaagtatcccattgagcatggcatcgtcagcaattgggatgacatggagaagatttggcatcacaccttctacaacgagctgcgtgtagctccggaagagcatccagtcttgctgactgaagctcccttgaacccaaaggccaaccgtgaacgcatgactcagatcatgttcgagaccttcaacgtgcctgcaatgtatgttgcaatccaggctgtgctgtccttgtatgcatctggccgaaccaccggaattgtgatggacagtggcgacggtgtgagccacaccgtgcccatctatgagggctatgctttgcctcatgccattctgcgtttggacttggctggtcgtgaccttacggagtacatgatgaagatcctcactgagcgcggctactccttcaccaccaccgctgagcgcgagattgttcgagacgtcaaggagaaactttgctacatcgccttggacttcgacagcgagatgaaggctgcatctgagagcagtgacaaggagaagacttacgaattgcctgatggcaacatcatcaccgttggatctgagcgtttccgctgcccagaagtcctgttccagccaagcttcgtgggcaaggaggccagcggcattcatgacaccaccttccaatcgattatgaagtgcgatgtcgatattcgaaaggatctctatgccaacgtggtgctttcaggtggaaccaccatgttccagggcattggtgagcgaatgaccaaggagctcactgctttggcaccgtccaccatgaagatcaaggtggttgctcctcctgagcgcaagtacagtgtgtggattggtggttctattctgtcttctctgagcactttccagcagatgtggatctccaagggcgaatatgatgagtctggccctaccatcgttcaccgcaagtgcttc Thecadinium_kofoidii ATGGGCGAGGAAGAGGTGGCCGCGCTGGTCGTGGACAACGGCAGCGGCATGTGCAAGGCGGGCTTCGCCGGCGACGACGCGCCGCGCGCCGTCTTCCCCTCCATCATAGGCCGCCCCAAGATGCCCGGCATCATGGTCGGCATGGACCAGAAGGACAGCTACGTGGGGGACGAGGCGCAGAGCAAGCGTGGCGTGCTCACCcTGAAGTATCCGATCGAACACGGCATAGTCACGAACTGGGACGACATGGAGAAGATTTGGCACCATACCTTCTATAACGAGCTCCGCGTCGCACCGGAGGAGCACCCAGTGCTTCTGACGGAGGCCCCGCTGAACCCCAAGGCGAACCGAGAGCGGATGACGCAGATCATGTTCGAGACCTTCAACGTGCCGGCCATGTACGTGGCCATCCAGGCCGTGCTCTCCCTCTACGCATCCGGCCGCACCACGGGCATCGTCATGGACTCGGGCGACGGCGTCTCGCACACGGTGCCCATCTACGAGGGCTACGCGCTGCCGCACGCCATCCTCCGCCTGGACCTCGCAGGCCGTGACCTCACGGAGTACCTGATGAAGATCCTCACGGAGCGGGGCTACTCCTTCACCACGACGGCGGAGCGCGAGATCGTGCGTGACGTCAAGGAGAAGCTCTGCTACATCGCGCTGGACTACGACACCGAGATGAAGGCGGCCTCGGAGAGCTCCGACAAGGAGAAGACCTACGAGCTCCCCGATGGCAACATCATCACCGTGGGCAGCGAGCGCTTCCGCTGCCCCGAGGTGCTCTTCCAGCCAAGCTTGGTCGGGAAGGAGGCGAGCGGCATCCACGACACCACGTTCCAGTCCATCATGAAGTGCGACGTGGACATTCGCAAGGACCTGTACTCGAACGTGGTGCTCTCCGGGGGCACGACGATGTTCGGCGGCATCGGCGAGCGCATGACGAAGGAGCTCACGGCCCTTGCGCCCTCGACGATGAAGATCAAGGTCGTGGCTCCGCCAGAGCGGAAGTACTCCGTCTGGATGGGGGGCTCCATCTTGTCGTCGTTGAGCACCTTCCAGCAGATGTGGATCTCTAAGACGGAGTACGACGAGTCAGGTCCGACGATCGTTCACAGGAAGTGCTTC Theileria_parva ATGTCTGACGAAGAGACTACTGCTTTAGTTGTGGACAATGGTTCCGGAAACGTTAAGGCAGGTTTCGCCGGTGATGACGCCCCCAGGTGCGTTTTCCCGAGCATTGTCGGTAGACCGAAAAATCCAGCACTCATGGTTGGAATGGACGAAAAGGATACCTATGTAGGTGACGAGGCGCAATCCAAAAGGGGTATCTTGACCCTCAAATATCCTATTGAACACGGTATCGTTACGAATTGGGAAGATATGGAGAAAATCTGGCATCATACCTTCTACAATGAACTAAGGATTGCACCTGAGGAACACCCGGTTCTCTTGACAGAAGCTCCCATGAACCCCAAGGCCAATCGTGAGAAGATGACCACTATCATGTTCGAGACCCACAATGTGCCAGCCATGTATGTTGCAATCCAGGCCGTACTATCACTTTACTCCTCGGGAAGAACTACCGGTATTGTGCTCGACTCTGGAGATGGTGTCACCCACACTGTGCCCATCTACGAAGGTTACGCGCTTCCTCATGCGATCATGAGACTCGATTTGGCCGGAAGAGACTTGACTGAGTTCATGCAGAAGATTCTGGTTGAACGTGGATTCTCTTTCACCACCACCGCTGAGAAGGAGATTGTCCGTGACATCAAGGAGAAGTTGTGCTACATTGCCCTCGACTTCGACGAGGAAATGACCACCTCATCATCATCATCCGAAGTTGAGAAGTCATACGAGTTGCCAGACGGTAACATCATAACAGTTGGAAACGAAAGGTTCAGGTGTCCTGAAGTGCTCTTCCAGCCCACCTTCATCGGTATGGAGGCCCCTGGAATCCACACCACCACCTACAACTCAATTGTTAGATGTGACGTGGACATTAGGAAGGATCTTTATGCCAACGTGGTGCTGTCAGGAGGCACGACCATGTTCGAGGGTATTGGTCAGAGGATGACTAAGGAGCTCAACGCGCTCGTACCTTCCACTATGAAGATCAAGGTTGTAGCCCCACCAGAACGCAAGTACTCTGTCTGGATTGGTGGTTCGATCCTGTCTTCACTCTCCACATTCCAGCAAATGTGGATCACCAAGGAAGAGTTCGACGAAAGTGGCCCCAATATTGTGCACCGTAAATGCTTT Toxoplasma_gondii ATGGCGGATGAAGAAGTGCAAGCCTTGGTGGTGGACAACGGGTCCGGAAACGTGAAGGCTGGCGTGGCCGGCGATGATGCGCCACGTGCCGTCTTCCCGTCTATCGTCGGAAAGCCCAAGAACCCGGGTATCATGGTCGGAATGGAGGAGAAGGACTGCTACGTCGGTGACGAAGCCCAAAGCAAGAGAGGTATTTTGACTCTGAAATACCCTATTGAGCACGGTATCGTCACCAACTGGGACGACATGGAGAAAATCTGGCATCACACCTTCTACAACGAACTGCGTGTGGCGCCTGAGGAGCACCCTGTGCTGCTCACGGAAGCCCCACTCAACCCCAAGGCGAACCGTGAGAGAATGACCCAGATTATGTTCGAAACCTTTAACGTCCCTGCCATGTATGTCGCTATCCAGGCCGTTCTTTCTCTGTACTCCTCCGGTCGTACCACCGGTATTGTGCTCGACAGTGGTGATGGCGTCTCTCACACTGTGCCCATCTACGAGGGGTACGCCCTGCCTCACGCCATCATGCGTTTGGATCTTGCTGGACGCGACCTTACCGAGTACATGATGAAGATTCTCCACGAGAGAGGATACGGCTTCACCACCTCCGCCGAGAAGGAAATCGTGCGCGACATCAAGGAGAAGCTTTGCTACATCGCCCTCGACTTCGACGAGGAAATGAAGGCGGCTGAGGACTCTAGCGACATCGAGAAGTCCTATGAATTGCCCGATGGCAACATCATCACCGTTGGCAACGAGCGATTCCGCTGCCCGGAGGCCCTCTTCCAGCCCTCCTTCTTGGGCAAGGAAGCTGCAGGTGTCCACCGCACCACCTTCGACTCGATTATGAAGTGCGACGTGGATATCCGTAAGGATCTGTACGGCAACGTCGTCCTTTCTGGAGGTACCACTATGTACGAGGGCATTGGCGAGAGGCTGACCAAGGAACTTACCTCCTTGGCTCCTTCCACCATGAAGATCAAGGTCGTTGCTCCTCCTGAGCGTAAGTACTCCGTCTGGATCGGAGGGTCCATTCTGTCCTCTCTCTCCACCTTCCAGCAGATGTGGATCACCAAGGAGGAGTACGACGAGTCTGGCCCGAGCATCGTCCACCGCAAGTGCTTC ; END; BEGIN MacClade; Version 4.0 86; LastModified -866660972; FileSettings editor '0' '0' '1' '1'; Singles 000; Editor 11011001111111100100010010 '1' '12' Geneva '9' '224' '1' all; EditorPosition '46' '6' '771' '1075'; TreeWindowPosition '46' '6' '799' '1102'; ListWindow Characters closed Geneva '9' '50' '10' '129' '406' 000; ListWindow Taxa closed Geneva '9' '50' '10' '561' '577' 1000000; ListWindow Trees closed Geneva '9' '50' '10' '276' '490'; ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490'; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490'; ListWindow ExSets closed Geneva '9' '50' '10' '276' '490'; ListWindow CharSets closed Geneva '9' '50' '10' '276' '490'; ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490'; ListWindow CharPartitions closed Geneva '9' '50' '10' '276' '490'; ListWindow CharPartNames closed Geneva '9' '50' '10' '276' '490'; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490'; ChartWindowPosition '52' '30' '782' '1092'; StateNamesSymbols closed Geneva '9' '10' '50' '30' '148' '220'; WindowOrder Data; OtherSymbols & / 00 ? -; Correlation '0' '0' '1000' '0' '0' 10011010; Salmo 00000001; EditorFile '4'; ExportHTML _ MOSS '100' 110000; PrettyPrint 10; EditorToolsPosition '113' '36' '115' '165'; TreeWindowProgram 10; TreeWindow 0000; Continuous '0' '3' 1; Calculations 0000001; SummaryMode '0' '0' 0; Charts Geneva '9' ( normal ) 0010; NexusOptions '0' '0' '50' 001011011; TipLabel '1'; TreeFont Geneva '9' ( normal ); TreeShape 1.0 1.0 0100; TraceLabels 0101; ChartColors '0' '0' '65535' '9' '0' 1; ChartBiggestSpot 1; ChartPercent 10; ChartBarWidth '10' 1; ChartVerticalAxis 10101; ChartMinMax '0'; TraceAllChangesDisplay '1' 1; BarsOnBranchesDisplay '0' '0' '60000' '10000' '10000' '10000' '10000' '60000' '65000' '65000' '65000' '6' '1' 0000101; ContinuousBranchLabels 0; AllStatesBranchLabels 1; IndexNotation '2' 1; PrintTree 10.00 '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' Geneva '9' ( normal ) Geneva '10' ( normal ) Geneva '9' ( normal ) Geneva '9' ( normal ) Geneva '9' ( bold ) Geneva '9' ( normal ) Geneva '9' ( normal ) '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '1' '1' '1' '1' '50' '-10901' '-39' '4' '-40' '0' '1' '2' '1' '8' '0' '0' '0' '2' 1000111000000000000100000111000; MatchChar 00 .; EntryInterpretation 01; ColorOptions 00; TreeTools '0' '5' '4' '0' '10' '4' '0' 00100111111101110; EditorTools '0' '0' '0' '1000' '0' '0' '6' '3' '0' 101010101110001; PairAlign '2' '2' '3' '2' '1' '1' '2' '1' '3' 1010; BothTools '1'; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS; TYPESET * UNTITLED = unord: 1 - 1128; END; BEGIN CODONS; CODONPOSSET * UNTITLED = 1: 1 - 1126\3, 2: 2 - 1127\3, 3: 3 - 1128\3; CODONPOSSET CodonPositions = 1: 1 - 1126\3, 2: 2 - 1127\3, 3: 3 - 1128\3; CODESET * UNTITLED = universal: 1 - 1128; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1128; END; BEGIN TREES; Title 'Trees from "S7_Actin_mRNA.tree"'; LINK Taxa = Taxa; TRANSLATE 1 Adenoides_eludens, 2 Akashiwo_sanguinea, 3 Alexandrium_fundyense, 4 Alexandrium_minutum, 5 Amphidinium_carterae, 6 Amphidinium_massartii, 7 Azandinium_spinosum, 8 Crypthecodinium_cohnii, 9 Cryptosporidium_parvum, 10 Dinophysis_acuminata, 11 Dinophysis_caudata, 12 Eimeria_tenella, 13 Gymnodinium_aureolum, 14 Gymnodinium_catenatum, 15 Hematodinium_sp, 16 Heterocapsa_triquetra, 17 Karenia_brevis, 18 Karenia_mikimotoi, 19 Karlodinium_veneficum, 20 Lepiodinium_chlorophorum, 21 Lingulodinium_polyedrum, 22 Noctiluca_scintillans, 23 Oxyrrhis_marina, 24 Pentapharsodinium_dalei, 25 Perkinsus_marinus, 26 Pfiesteria_piscicida, 27 Polarella_glacialis, 28 Prorocentrum_lima, 29 Prorocentrum_micans, 30 Prorocentrum_minimum, 31 Pseudopfiesteria_shumwayae, 32 Scrippsiella_trochoideae, 33 Symbiodinium_c3, 34 Thecadinium_kofoidii, 35 Theileria_parva, 36 Toxoplasma_gondii; TREE tree_1 = ((((((((((((((((5:0.013637919167351187,6:0.02235057876086935):0.01209177953296256,22:0.045043033948124395):0.018691770212528214,((17:0.011154923770348935,18:0.0034276157058176215):0.009940042732077159,19:0.02489166221260286):0.007257211102352001):0.004292783168325431,((15:0.19979239409110522,33:0.016841948087230857):0.013473053895708936,27:0.023037188845728557):0.006169717671415276):0.007354214588490449,(7:0.013771366839771149,1:0.0020159302777018606):0.017975762339629053):8.764601858181065E-4,((((26:0.00936701271491508,31:0.03733537451082175):0.022864914103608414,8:0.03941935345924705):0.0022363017181650513,24:0.007578421385270567):0.019709750823037248,((3:0.0018932341397517038,32:0.005403889488544034):0.020631456748818555,4:0.017248055268926393):0.007013318548690972):0.001964514059087097):0.004007477180890839,((10:0.012191114815810034,11:0.006852487996399648):0.006912416065903704,(21:0.021067977273621752,34:0.010254461590305186):0.005497559858371581):1.3598231300981922E-6):0.003337885796877771,16:0.00514603280016851):0.0033542170737071997,(30:0.1558304907195552,28:0.03327090341858499):0.009903248257225633):0.0012803101939660166,2:0.035880223349387674):1.3598231300981922E-6,29:1.359823130042681E-6):0.006148735984222414,13:0.03778275905800335):6.883833548278762E-4,(23:0.07772512741467327,14:0.0028621041733875863):0.022571656260544998):0.005285202337161149,20:0.005524951017558483):0.028957986357286386,25:0.05140855892240606):0.027919226329048488,(((12:0.02809260414740089,36:0.01741119017615897):0.02757058062270981,9:0.13067569555549471):0.027604013963666463,35:0.15522658421972294):0.027919226329048488); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1345537964132; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 3356570181301443310; tell It; setDefaultOrder 17 22 0 1 23 24 18 8 30 6 7 31 21 20 35 13 25 26 27 19 2 28 34 12 29 9 5 15 14 16 10 11 4 3 32 33; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 1149851788759221512; mqVersion 275; checksumv 0 3 3070516820 null getNumChars 1128 numChars 1128 getNumTaxa 36 numTaxa 36 short true bits 3458764513820540943 states 15 sumSquaresStatesOnly 753705.0 sumSquares -8.169601781644118E21 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 135; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 994 775; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #3356570181301443310 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #3356570181301443310; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 859 708; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.sort; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #1149851788759221512 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 337; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 859 708; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.chromaseq.ColorQuality.ColorQuality; tell It; toggleAmbiguities on; toggleMarks on; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; getEmployee #mesquite.chromaseq.SourceFileInfoEditor.SourceFileInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;