#NEXUS [written Tue Aug 21 10:34:44 CEST 2012 by Mesquite version 2.75 (build 566) at 1x-193-157-241-103.uio.no/193.157.241.103] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=31; TAXLABELS Adenoides_eludens Akashiwo_sanguinea Alexandrium_fundyense Alexandrium_minutum Amphidinium_carterae Amphidinium_massartii Amphidinium_mootonorum Azadinium_spinosum Eimeria_tenella Gymnodinium_aureolum Gymnodinium_fuscum Heterocapsa_triquetra Karenia_brevis Karenia_mikimotoi Karlodinium_veneficum Kryptoperidinium_foliaceum Lepidodinium_chlorophorum Noctiluca_scintillans Oxyrrhis_marina Pentapharsodinium_dalei Peridinium_willei Perkinsus_marinus Polarella_glacialis Prorocentrum_micans Prorocentrum_minimum Protodinium_simplex Scrippsiella_trochoidea Spiniferodinium_galeiforme Thecadinium_kofoidii Theileria_parva Toxoplasma_gondii ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=1820; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Adenoides_eludens -----------------------------------------------------------------------------------------------------------------------------------------cagccaaatTTCtacATCaAGATCATCCCCGACAAGACGAACTCGACGATCACTATCGAAgactcgggAATCGGCATGACGAAGAATGAGCTCATCAACAATTTAgGCACCATTGCCAAGTCTGGCACCAAGGCCTTCATGGAAGCAATGGCAGCAGGTGGTGACATCTCCATGATTGGGCAGTTCGGGGTTGGGTTCTACTCGGCGTACCTGGTGTCGGACAAGGTGCGCGTCGTGAGCAAGAACAACGACGACGAGCAGTACATTTGGGAGTCGGGTGCGGGCGGCTCCTTCACTGTGCAGAAAGACACAGAGCTAGTGCATGGAGAGGTGAAGCGCGGCACGAAGGTGATCTGCTATCTCAAGGAGGACCAGTCTGAGTTCTTGGAAGAGCGACGCTTGAAAGACTTAgtGAAGAAGCACTCCGAGTTCATCGGCTTCCCGATCGAGCTCtACGTGgagAAGTCCAAGGAGaaggaggtcacagactctgaggatgag---gaggaggagaagaag---------gaggaggaa---aaggaaggtgacgagcccaagatcgaggaggtg---------------------------gacgaggagaaggagaaggaggag---------------------aagaagaaaaagacgaaaaaggtcaaagaggtctcgcacgagtgggagcagttgaacaagaacaagcctttgtggatgcgcaagtctgaggacgtcaccaacgaggagtacgcctccttctacaagtctttgtcgaacgattgggaggaccacttgtccgtgaagcacttcagtgtcgaggggcagctcgagttccgcgcactgctcttcgtgcctcggcgtgcgcctttcgacctcttcGAGTCCAAGAAGAAGAGGAACAACATTAAGTTGtATGTCCgCCGTGTGtTCATCATGGACGACTGTGATGAGTTGATGCCAGAgTGGCTCAAcTTCGTGAAGGGCGTGGTGGACTCGGAGGACTTGCCGCTGAACATCTCGCGTGAGACCTTGCAGCAGAACAAAATCTTGCGTGTGATCAAGAAAAACTTGGTAAAGAAGTGCCTTGAGATGTTTGCCGAAATCGCC---GAGAAGAAGGACGACTACAAAAAGTTCTACGAGCAGTTCGGCAAGTGCTTGAAGTTGGGCGTCCACGAGGACTCCACGAACCGAACGAAGGTTGCGGAGTTGATGCGTTACCACACTTCCAAATCAGGTGACGAGCAGATCAGCTTCAAGGAGTACGTCGACCGCATGAAAGAAGGCCAGAATGACATCTACTATATTACAGGTGAGAGCATCGCGGCAGTGTCATCTTCGCCATTCTTGGAGACGTTGCGCAAAAAGGGATACGAGGTCATGTATATGGTGGACCCGATTGACGAGTATTCGGTGCAGCAGcTGAAGGAGTTCGACGGGAAAAAGTTGAAGTCGACCACGAagAAGGGC---CTGGACATCGAAGAT---GAAGATGAGAAAAAGAAGATCGAGGAGCTGAAGGCaGAGTTCGAGCCG------------------------------------------------------------------------------------------------------------------------------------------ Akashiwo_sanguinea ttccttcgtgagctgatatccaatgcctccgatgcactcgacaagattcgatatgagtccatcacggaccctgacaaaatagaagca--------------------------------------------------cagccaaacttcttcatcaaaattatcccagacaagaccaactccacactcaccattgaagactcggggattggcatgaccaagaatgaactcatcaacaatctgggcacaatcgccaagtccggcaccaaggctttcatggaggccatggcagcaggtggtgacatctcgatgattggtcagtttggtgttggcttttattcagcgtacctcgtttctgacaaggttcgtgtggtcagcaagcacaacgatgatgagcaatacgtctgggagtcggctgctggaggctccttcacggtgcagaaggacactgagctcgtgcatggagaggtgaaacgcggaaccaaagtgatctgttacctcaaggaggatcagtcagaattcctcgaggagcgccgcttgaaggatttggtgaagaagcactctgaattcatcggcttcccaattgagttgtatgtggaaaagtcaaaggaaaaggaggtgacagattcagaggatgag---gaggaagagaagaaa---------gaagaagag---aaggagggtgatgagcccaagatcgaagaggtg---------------------------gatgaagagaaggagaaagaggaa---------------------aagaaaaagaaaaccaagaaggtgaaggaggtttcccatgagtgggagcagctgaacaagaacaaacctctgtggatgcgcaagtccgaggacgtgacaaacgaggagtatgcatccttctacaagtccttgtcaaacgactgggaagatcacctttctgtgaagcacttcagtgtcgaaggtcaacttgagttcagggccttgctgttcgtccctcgacgcgccccattcgatctctttgagaccaagaagaagcgcaataacatcaagctgtacgtgcgccgtgtcttcatcatggacgactgtgacgagctcatgccagaatggctgaacttcgttaagggtgttgtggactccgaggaccttccactgaacatctcccgtgagacactccagcaaaacaaaatccttcgtgtgatcaagaagaatctcgtgaagaagtgtttggagatgttcgccgaaatcgct---gagaaaaaggacgattacaagaaattctacgagcagtttggaaagtgcctgaagctcggcgtccatgaggactccacaaaccgcactaaggtggctgaactgctccggtttcacacgtccaagtctggcgatgagcaaatcagcttgaaggagtatgtggacagaatgaaggaagggcagaatgacattttctacatcacaggcgagagcatcgctgctgtgtcatcgtctccattccttgagactctgcgcaagaaaggcctggaggtgttgtacatgacagatccaattgatgagtgtgcagtgcagcagttgaaggaattcgatggcaaaaagttgaagtccaccaccaaagagggc---ttggacatcgaagat---gaggacgagaagaaaaagcttgaagagctgaaggcagaatttgaacctctcaccaagctcatcaaggaggtgcttggcgacaagacagagaaggtggtggtgagctcgcgcatggctgactccccatgcgttctgaccacctctgagtatggctggtcagccaatatggaacgcattatgaaggcg Alexandrium_fundyense -----------------------------------------------------------------------------------------------------------------------------------------CAGCCCAATTTCTATATCAAGATCATTCCGGATAAGACCAACTCTACGATCACCATTGAGGATTCCGGCATTGGTATGACCAAGAATGAGCTTATCAACAACTTGGGCACCATTGCCAAGTCTGGCACCAAGGCTTTCATGGAAGCCATGGCCGCAGGTGGCGATATTTCCATGATTGGCCAGTTCGGTGTGGGTTTCTACTCTGCGTACTTGGTCTCAGACAAAGTCCGTGTGGTGAGCAAGAACAACGATGACGAGCAATACATTTGGGAGTCTGGGGCTGGCGGTTCGTTCACGGTGCAGAAAGACACCGAATTTGTCCATGGCGAGGTCAAGCGGGGGACGAAAGTCATCTGTTACTTGAAAGAGGACCAGTCCGAATTCTTAGAGGAGCGCCGCCTCAAGGACTTGGTGAAGAAGCACTCAGAGTTCATCGGTTTCCCCATTGAGCTTTACGTGGAAAAGTCGAAAGAGAAGGAAGTGACTGATTCTGAAGACGAG---GAGGAGGAGAAAAAA---------GAGGAGGGC---AAGGAGGGCGATGAGCCAAAGATTGAGGAGGTT---------------------------GATGAGGAGAAAGAAAAGGAGGCC---------------------AAGAAGAAGAAGACCAAGAAGGTCAAGGAAGTTTCGCATGAGTGGGAGCAGCTGAACAAGAACAAGCCGCTGTGGATGCGCAAGTCTGAGGATGTGACCAATGAGGAGTACTCCTCCTTCTACAAGTCCCTCTCCAACGATTGGGAGGATCATCTGGCTGTCAAGCACTTCAGCGTTGAAGGACAGCTTGAGTTCCGGGCTCTGCTCTTTGTGCCACGCAGGGCGCCATTTGATCTTTTTGAGTCCAAGAAGAAGAGGAACAACATCAAGTTGTACGTGCGCCGTGTCTTCATCATGGATGACTGTGATGAATTGATGCCGGAGTGGCTCAACATGGTCAAGGGCGTTGTGGACTCAGAGGACCTGCCTCTGAACATCTCCCGAGAGACGCTGCAGCAGAACAAGATCTTGCGTGTCATCAAGAAGAACTTGGTCAAGAAGTGCCTGGAGATGTTCGCTGAGATTGCT---GAGAAGAAGGATGACTACAAGAAGTTCTATGAGCAGTTCGGGAAGTGCCTCAAGCTTGGCGTCCATGAGGACTCCACCAACCGCACAAAGGTTGCTGAGCTCCTCCGGTTCCACACATCCAAGTCAGGCGATGAGCAGATTAGTCTGAAGGAGTATGTGGATCGTATGAAGGAGGGACAGAACGACATCTACTACATCACTGGCGAGAGCATCACAGCTGTCTCCTCGTCACCTTTCCTGGAGAATCTCCGCAAGAAGGGCCTTGAGGTCCTCTATCTGGTGGACCCAGTTGATGAGTACGCAGTCCAGCAGCTGAAGGAGTTTGATGGCAAAAAGCTGAAGTCCACCACCAAGGAGGGT---CTGGACATTGAGGAT---GAGGATGAGAAGAAGAAGCTCGAGGAGCTCAAGGCAGAGTTTGAGCCC------------------------------------------------------------------------------------------------------------------------------------------ Alexandrium_minutum -----------------------------------------------------------------------------------------------------------------------------------------CAGCCCAACTTCTACATCAAGATCATTCCAGACAAGACAAACTCCACCATCACCATCGAGGACTCCGGCATCGGCATGACAAAGAATGAGTTGATCAACAACTTGGGCACCATCGCCAAGTCTGGCACCAAGGCCTTCATGGAGGCCATGGCCGCAGGCGGCGACATCTCCATGATCGGGCAGTTCGGTGTCGGTTTCTACTCTGCGTACCTGGTCTCCGACAAGGTTCGCGTGGTCAGCAAGAACAACGACGACGACCAGTACATCTGGGAGTCCGGTGCGGGTGGCTCCTTCACGGTGCAGAAGGACACCGAGTTCGTCCATGGTGAGGTGAAGAGAGGTACTAAGGTGATCTGCTACCTGAAGGAGGACCAGAGCGAGTTCCTCGAGGAGCGCCGTCTGAAGGACTTGGTCAAGAAGCACTCCGAGTTCATCGGCTTCCCGATCGAGCTGTACGTCGAGAAGTCGAAGGAGAAGGAGGTGACCGACTCCGAGGACGAG---GATGAGGAGAAGAAG---------GAGGAGGGC---AAGGAGGGCGACGAGCCCAAGATCGAGGAGGTG---------------------------GACGAGGAGAAGGAGAAGGAGGCC---------------------AAGAAGAAGAAGACCAAGAAGGTCAAGGAGGTGTCCCACGAGTGGGAGCAGCTGAACAAGAACAAGCCGTTGTGGATGCGGAAGTCCGAGGACGTGACGAACGAAGAGTACTCCTCCTTCTACAAGTCCCTCTCCAACGACTGGGAGGACCATCTTGCGGTCAAGCACTTCTCGGTTGAGGGCCAGCTGGAGTTCCGCGCTCTGCTCTTCGTGCCGCGCAGGGCGCCCTTCGACCTCTTCGAGTCGAAGAAGAAGAGGAACAACATCAAGCTGTACGTGCGCCGCGTCTTCATCATGGACGACTGCGACGAGCTCATGCCTGAGTGGCTGAACATGGTCAAGGGCGTCGTCGACTCCGAGGACCTGCCCCTCAACATCTCGCGCGAGACACTGCAGCAGAACAAGATCCTGCGCGTCATCAAGAAGAACTTGGTGAAGAAGTGCTTGGAGATGTTCGCAGAGATTGCC---GAGAAGAAGGACGACTATAAGAAGTTCTACGAGCAGTTCGGCAAGTGCCTCAAGCTCGGCGTCCACGAGGACTCCACGAACCGCACGAAGGTCGCTGAGCTCCTGCGCTTCCACACCTCGAAGTCCGGCGACGAGCAGATCAGCCTGAAGGAGTACGTGGACCGCATGAAGGAGGGCCAGAACGACATCTACTACATCACCGGCGAGAGCATCACGGCGGTCTCGTCCTCCCCGTTCCTCGAGAACCTCCGGAAGAAGGGCCTCGAGGTCCTGTACATGGTCGACCCCGTCGACGAGTACTGCGTCCAGCAGCTGAAGGAGTTCGACGGGAAGAAGCTCAAGTCCACCACGAAGGAGGGC---CTCGACATCGAGGAC---GAGGACGAGAAGAAGAAGCTCGAGGAGCTCAAGGCTGAGTTCGAGCCC------------------------------------------------------------------------------------------------------------------------------------------ Amphidinium_carterae ttcctccgcgaattgatctccaatgcctctgatgccttggacaagatccgctatgagtccatcaccgacccagagaagatcgaagca--------------------------------------------------cagccaaacttcttcatcaagattgtcccagacaagaccaactctacaatcgccatcgaggactccggtattggcatgacgaagaatgagctcgtgaacaaccttggtaccaccgcaaagtctggaacaaaagcattcatggaggcaatggcagcaggcggtgacatctcgatgattgggcagtttggcgtcggcttctactccgcgtacctcgtgtccgacaaggtgcgtgtcattagcaagcacaatgacgatgagcagtacatctgggagtctgccgcaggaggctctttcacggtgcagaaggacactgagctggtgcacggagaggtcaagcgtggcaccaaggtgatctgctatctcaaggaggaccagtccgagttcttggaggagcgtaggttgaaggatttggtgaagaagcactcagagttcatcggtttccccattgaactctatgtggagaagtccaaggagaaggaagtgactgactctgaggaggag---gatgaggagaagaag---------gaggaagagggtaaggagggtgacgagcccaagatcgaggaggtg---------------------------gatgaggagaaggagaaggaggga---------------------aagaaaaagaagacaaagaaggtgaaggaggtgagccacgagtgggagcagctgaacaagaacaagccgttgtggatgcgcaagagtgaggatgtcaccaacgaggagtacgcatcattctacaagagcttgtcgaacgattgggaagaccacttggccgtgaagcacttcagcgtcgagggccagctcgagttccgcgctttgcgctgtgtcccccgccgtgctcccttcgacctcttcgagtcaaagaagaagaggaacaacatcaagctctacgtgaggcgagtattcatcatggatgattgtgaggagttgatgccagagtggctgaacttcgtcaagggcgtagtggactctgaggatcttcccctgaacatctcccgtgagaccttgcagcagaacaagatcttgcgtgtgatcaagaagaacctggtgaagaagtgccttgagatgttcgcagagatcgcc---gagaagaaggacgactacaagaagttctatgagcagtttggcaagtgcttgaagctcggcatccatgaggactccaccaacagaactaaggttgcggagctcttgcgtttccacacctccaagtcgggcgacgagcagatcagcttggaggagtacgttgacaggattaaggaaggccagaatgacatctactacattacaggtgagagtattgcccaggtgtcatcctctcccttcttggagacgctgcgcaagaagggctacgaggtgctctacatggttgacccagttgatgagtacgccgttcagcagctgaaggagtttgatggcaagaagctgaagtcgaccaccaaggaaggg---ctcgagatcgatgac---gaggatgagaagaagaagctcgaggagatgaaggctgagttcgagccactcacaaagctcatgaaggaagtgttgggcgacaaggttgagaaggtgcttatcagctcgcgcatggcagattctccatgcgtgctcaccacatccgagtatggttggtcaGCCAATATGGAGCGCATCATGAAGGCA Amphidinium_massartii -----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACAAGACCAACTCCACCATCACCATCGAGGACTCTGGCATTGGAATGACGAACAATGAACTTGTCAACAATTTGGGCACCATCGCAAAGTCTGGCACCAAAGCATTCATGGAGGCCATGGCGGCCGGCGGCGACATCTCCATGATCGGACAGTTCGGAGTGGGGTTCTACTCAGCGTACTTGGTGTCTGACAAGGTGCGTGTGGTGAGCAAGCACAACGATGACGAGCAGTACATCTGGGAGTCCGCGGCTGGTGGTTCCTTCACAGTGCAGAAGGACACCGAGCTGGTGCACGGTGAGGTGAAGCGAGGTACCAAGGTCATCTGCTACCTCAAGGAAGACCAGTCCGAGTTCTTGGAGGATCGAAGGCTCAAGGATTTGGTGAAGAAGCATTCCGAGTTCATTGGCTTCCCCATTGAGCTGTATGTGGAGAAGTCAAAGGAGAAGGAAGTCACTGACTCCGAGGAGGAG---GAAGAGGAGAAGAAG---------GATGAGGACGGCAAGGAGGGCGATGAGCCCAAGATTGAGGAGGTG---------------------------GACGAGGAGAAGGAGAAGGAGGAG---------------------AAAAAGAAGAAGACCAAGAAGGTCAAGGAGGTCTCTCACGAGTGGGAGCAGCTCAACAAGAATAAGCCGCTCTGGATGAGGAAGAGCGAGGATGTCACCAATGAGGAGTACGCATCCTTCTACAAGAGCTTGTCCAACGACTGGGAAGACCCCTTGGCCGTGAAGCACTTCCGCGTTGAGGGCCAGCTCGAGTTCCGAGCTCTGCTCTTCGTGCCTCGCCGCGCCCCCTTCGACCTCTTCGAGTCCAAGAAGAAGAGGAACAACATCAAGCTCTACGTGCGCCGAGTCTTCATCATGGATGATTGCGAGGAGTTGATGCCAGAGTGGCTCAACTTCGTGAAGGGCGTGGTGGACTCAGAGGACCTCCCTCTCAACATCTCTCGTGAGACCTTGCAGCAGAACAAGATCCTTCGCGTGATCAAGAAGAACCTCGTGAAGAAGTGCCTGGAGATGTTTGCCGAGATTGCG---GAGAAGAAGGACGATTACAAGAAGTTCTACGAGCAGTTTGGCAAGTGCTTGAAGTTGGGCATCCACGAGGACTCCACCAACAGGACCAAGGTGGCTGAGCTCTTGCGCTTCCACACGTCCAAGTCGGGCGATGAGCAGATCAGCCTCAAGGAGTACGTTGACCGCATGAAGGAGGGCCAGAACGACATCTACTACATCACCGGTGAGAGCATCGCAGCAGTCTCCTCGTCGCCATTCTTGGAGACCCTGCGCAAGAAGGGCTATGAGGTGCTCTACATGGTTGATCCAGTGGATGAGTACGCTGTGCAGCAGCTGAAGGAGTTCGACGGCAAGAAGCTCAAGTCCACCACCAAGGAGGGT---CTCGAGATCGACGAC---GAGGATGAGAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Amphidinium_mootonorum ttcctccgcgagcttatctcgaacgcgtcggacgcgttggacaagatcaggtacgagtccatcaccgatcccgagaagatcgaggcg--------------------------------------------------cagcccaacttctacatcaagattattccggacaagacgaactcgacaatcactgtcgaggactccgggatcgggatgacgaagaatgagctcatcaacaacttggggaccatcgccaaatcgggcacgaaggccttcatggaggcaatggctgcaggtggtgacatctcgatgatcgggcagttcggcgtgggcttctactccgcttacctggtctccgacaaggtccgagtgatcagcaagcacaacgacgacgagcaatacgtctgggagtccgctgcgggtggttctttcactgtgcagaaggacaccgagatggtgcatggcgaggtgaagcgtggcacgaagatcatctgctacttaaaggaagaccagtccgagtttctggaggaacgccgcctgaaggatctggtcaagaagcactcggagttcattggcttcccgatcgagctgtacgtggagaagtcgaaggagaaggaggtcacggactctgaggaggag---gaggaggagaagaag---------gcggaggag------gccaccgatgagccaaagatcgaggaagtc---------------------------gatgaggagaaggagaaggaggac---------------------aagaagaagaagacgaagaaggtgaaggaggtctcgcacgaatgggagcagctcaacaagaacaagcccctttggatgcggaagtccgaagacgttacgaacgaggagtacgcttcgttctacaagtcgctctccaacgactgggaagaccacctcgcggtgaagcatttcagcgtcgagggccagctcgagttccgcgcgttgctcttcgtgccgcggcgcgcacccttcgacatgttcgagtccaagaagaagcgcaccaacatcaagctctacgtgcgccgtgttttcatcatggacgactgtgacgagctcatgccagagtggctgtctttcgtcaagggcgtcgtcgactcagaggatcttcccctcaacatctcgcgcgagaccctgcagcagaacaagatcttgcgtgtgatcaagaagaacctcgtgaagaagtgcttggagatgttcgctgagatttcg---gagaaaaaggatgactacaagaagttctacgaacagttcggcaagaacatcaagctcggcatccatgaggattccacgaacagggccaaagttgcagagctcatgcgctaccacagctcgaagtccggggacgaacagatcagcctcaaagagtacgtggaccgaatgaaggagggccagaacgacattttctacatcaccggcgagagcatcgcgcaggtgtcgtcctcgccgttcctggagactctgcgcaagaagggccccgaagttctctacatggtggaccccatcgacgagtatgcggtgcagcagctcaaggagttcgatgggaagaagctcaagtccaccacgaaggagggg---ctagacatcgaggac---gaagacgagaagaagaagatcgaggagctgaaagcggagttcgagccgctcaccaagctcatgaaggaggtgctcggagacaaggtcgagaaggtggtggtcagttcgcgcatggccgactcgccatgcgtcctcactacttccgagtatggctggtctgcgaatatggaacgcatcatgaaggca Azadinium_spinosum -----------------------------------------------------------------------------------------------------------------------------------------CAGCCAAACTTCTTCATCAAGATTATTCCCGACAAGACTAACTCCACCATCACCATCGAGGACTCTGGCATCGGCATGACCAAGAACGAATTGATCAACAACCTTGGCACTATTGCCAAGTCGGGAACTAAAGCTTTCATGGAGGCGATGGCCGCAGGTGGGGACATCTCCATGATCGGCCAGTTCGGTGTCGGGTTCTATTCCGCTTACCTCGTCTCCGACAAGGTCCGCGTTGTTAGCAAGCACAACGATGATGAGCAGTACATCTGGGAGTCCGGCGCTGGCGGCTCCTTCACCGTGCAGAAGGATACAGAGCTGGTGCACGGGGAGGTCAAGCGGGGCACGAAGGTGATCTGCTATCTCAAGGACGACCAGTCTGAGTTCCTGGAGGAGCGCCGTCTCAAGGATTTGGTCAAGAAGCACTCGGAGTTCATCGGTTTTCCCATTGAGCTTTACGTTGAGAAGTCGAAGGAGAAGGAGGTGACGGATAGCGAGGATGAA---GAGGAGGAGAAGAAG---------GAGGAGGAC---AAGGAGGGTGACGAGCCGAAGATTGAGGAGGTT---------------------------GATGAGGAGAAGGAGAAGGAAGCC---------------------AAGAAGAAGAAGACGAAGAAGGTGAAGGAGGTCTCCCACGAGTGGGAGCAGCTTAACAAGAACAAGCCCTTGTGGATGCGGAAATCCGAGGACGTGACCAACGAGGAATACGCCTCGTTCTACAAGAGTTTGAGCAATGATTGGGAAGACCACCTCGCCGTCAAGCACTTCAGCGTGGAGGGTCAGTTGGAGTTCCGTGCGTTGCTCTTCGTGCCGCGCCGTGCTCCGTTCGACTTGTTCGAGACTAAGAAAAAGCGCAACAACATCAAGCTTTaCGTGCGCCGGGTCTTCATCATGGACGATTGCGAAGAACTCATgCCGGAGTGGCTCaACATGGTCAAGGGTGTGGTGGACTCTGAGGACTTGCCTTTGAACATCTCCCGTGAGACCTTGCAGCAGAACAAGATCCTTCGGGTCATCAAGAAGAACTTGGTGAAGAAGTGCCTAGAGATGTTTGCCGAGATTGCC---GAGAAGAAGGATGATTACAAGAAGTTCTATGAACAGTTCGGCAAGTGCttGAAGCTCGGCATCCACGAGGACTCCACAAACCGCACGAAGATCGCGGAGCTGATGCGCTACCACACTTCCAAGTCAGGAGATGAGCAGATCAGCTTGAAGGAGTACGTGGACCGCATGAAGGAGGGCCAAAACGACATCTACTATATCACGGGTGAGAGCATCGCTTGCGTGTCCTCGTCGCCCTTTCTGGAGACCTTGCGCAAGAAGGGTCTGGAGGTCCTCTACATGGTGGACCCGGTCGATGAGTACGCAGTGCAGCAGCTCAAGGAGTTCGATGGCAAGAAGCTGAAGTCGACCACAaaGGAGGGC---TTGGATATCGAGGAC---GAGGACGAGAAGAAGAAGCTCGAGGAGttgaaggctgagtttgagcca------------------------------------------------------------------------------------------------------------------------------------------ Eimeria_tenella TTCCTGCGTGAGTTGATCTCGAACGCGTCCGACGCTCTCGACAAGATCCGCTATGAGGCAATTACAGAGCCGGAGAAGCTGAAGACG--------------------------------------------------AAGCCGGAGCTGTTCATCAGGCTGATCCCCGACAAGGCCAACAACACCCTGACCATCGAGAACAGCGGGATTGGCATGACCAAGGCGGACCTGGTGAACAACTTGGGAACCATCGCGCGCTCGGGCACGAAGGCCTTCATGGAGGCACTGCAGGCCGGCGGGGACATCTCCATGATTGGCCAGTTCGGTGTGGGTTTCTACTCAGCCTACCTGGTGGCGGACAGCGTGACAGTAGTGTCGAAGCACAACGACGACGAACAGTATGTGTGGGAGTCCGCGGCCGGGGGCTCCTTCACTGTGCAAAAAGATGACAAA------TACGAGCCGCTGGGCCGCGGGACCCGCATCATTCTGCACTTGAAGGAGGACCAGGGCGAGTACCTCGAGGAGCGCAGGCTGAAGGACTTGGTGAAGAAACACTCCGAGTTCATTTCCTTCCCCATCGAGCTCGCCGTCGAGAAGACCCACGAGCGCGAAGTGACGGAATCCGAGGACGAG---GAGGAGAAGAAGGCCGACGAGAAGGCCGAGGAG---AAGGAGGGCGAGGAGAAGAAG------------------------------------------GAAGGCGAGGAGAAGAAGGAGGGCGAAGAGGAAAAGAAGGAGAAGACCGGGAAGACCAAGAAGGTCCAGGAGGTCACCCGCGAGTGGGAGCAGCTCAACAAGCAGAAGCCCCTCTGGATGCGCAAGCCCGAGGAAGTCACTGAAGAGGAATACGCTTCTTTCTACAAGTCCCTTTCCAATGACTGGGAAGAACACTTGGCTGTCAAGCACTTCAGCGTCGAGGGCCAGCTCGAGTTCAAGGCTCTCCTCTTCGTCCCCAAGAGGGCCCCCTTCGACCTTTTCGAAACCCGCAAGAAACGCAACAACATCAAGCTCTATGTGCGCCGCGTCTTCATCATGGACGACTGCGAAGACATCATCCCGGAGTGGCTGAACTTCGTGAAGGGTGTTGTTGACTCCGAGGACTTGCCCCTCAACATCTCCAGGGAGAGCCTCCAGCAGAACAAGATCCTCAAGGTCATCCGCAAGAACCTCGTCAAGAAGTGCCTCGAGATGTTCGCCGAAATCGAA---GAAAAGAAGGAAAACTACGCCAAGTTTTACGAGCAGTTCTCCAAGAACCTCAAGCTCGGTATCCACGAGGACAGCGCCAACCGCGCTAAGATCGCTGAGCTGCTGCGCTTCCACAGCAGCAAGTCTGGAGAGGACATGGTGTCCTTCAAGGAGTACGTGGACCGCATGAAGGAAGGCCAGAAGGACATTTACTACATCACTGGAGAGTCTCGTCAGACTGTGGCGAACTCTCCATTCCTGGAGAAGCTGACGAAGAAGGGTTACGAGGTGCTGTACATGACAGACCCCATTGACGAGTACGCAGTGCAGCAGCTGAAGGAGTTCGACAACCACAAGCTGCGCTGCTGCACGAAGGAGGGC---CTTGAGATTGACGAGTCTGAGGAGGAGAAGAAGAAGTTCGAAGAGCTGAAGGCCGAGTTCGAGCCGCTGCTGAAACTCATCAAAGAGGTGCTGCACGACAAAGTCGACAAGGTGGTCCTCTCCAACAGAATCACCGACTCCCCCTGCGTGCTGGTGACCACTGAGTTTGGCTGGTCCGCCAACATGGAGCGGATCATGAAGGCT Gymnodinium_aureolum -----------------------------------------------------------------------------------------------------------------------------------------cagcccaacttcttcaTCAAGATTGTGCCCGACAAGACCAACTCCACCTTGACGATCGAGGACAGCGGTATCGGCATGACGAAGAACGAGCTCGTGAATAATTTGGGCACCATCGCAAAGTCTGGCACCAAGGCGTTCATGGAGGCCATGGCTGCCGGCGGTGACATTTCTATGATCGGCCAGTTCGGCGTGGGCTTCTACTCCGCCTACCTCGTCTCCGACAAAGTCCGCGTGGTGAGCAAGCACAACGACGACGAGCAGTACGTCTGGGAGTCCGCGGCGGGCGGCTCCTTCACGGTGCAGAAGGACACAGAGTTGGTGCACGGCGAGGTGAAGCGTGGCACTAAGATCATCTGCTATCTCAAGGAGGACCAGTCCGAGTTCTTGGAGGAGCGCCGCcttAAGGACTTGGTGAAGAAACACAGCGAGTTCATTGGCTTCCCCATCGAACTCTACGTGGAGAAGAGCAAGGAGAAGGAGGTGACGGACTCCGAGGACGAG------GAGGAGAAGAAG---------GAGGAGGAGGGCAAGGAGGGCGACgAGCCCAAGATCGAGGAGGTG---------------------------GACGAGGAGAAGGAAAAGGAGGAG---------------------AAGaagaaaaaaaccaagaaggtcaaggaagtctcccacgagtgggagcagctgaacaagaacaagcccctttggatgcgaAAGTCGGAGGATGTGACCAACGAGGAGTACGCCTCCTTCTACAAGTCtCTTTCCAACGATTGGgAAGACCACCTCTCGGTCAAGCACTTCAGCGTGGAGGGCCAGCTGGAGTTCCGCGCGcTGCTtTTCGTGCCgCGCCGgGCGCCCTTCGACCTCTTCGAGACGAAGAAGAAACGCAACAACATCAAGCTCTACGTGCGCCGCGTCTTCATCATGGACGATTGCGACGAGCTCATGCCCGAGTGGTTGAACATGGTGAAGGGCGTCGTGGATTCGGAGGACTTGCCCTTGAACATCTCTCGCGAGACGCTGCAGCAGAACAAGATCCTGCGTGTGATCAAGAAGAACCTCGTGAAGAAGTGCCTGGAGATGTTCGCGGAGATTGCG---GAGAAGAAGGACGACTACAAGAAGTTCTACGAGCAGTTCGGCAAGTGCTTGAAGCTCGGCGTGCACGAGGATTCCACGAACCGCACCAAGGTCGCGGAGCTGATGCGGTACCAGACCTCCAAGTCTGGCGACGAGCAGATCAGCTTCAAGGAGTACGTGGACCGGATGAAGGAGGGCCAGAACGACATCTACTACATTACGGGCGACAGCaTCGCAGCGGTCTCCTCCTCGCCCTTCCTCGAGACGTTGCGCAAGAAGGGCCTCGAGGTGTTGTACATGACGGACCCCATTGACGAGTACGCCGTGCAGCAGCTCAAGGAGTTCGACGGCAAGAAGCTGAAGTCTGTGACCAAGGAGGGC---CTCGACATCGATGAC---GAGGATGAGAAGAAGAAGCTCGAAGAGCTCAAGGcgGAGTTCGAGCCc------------------------------------------------------------------------------------------------------------------------------------------ Gymnodinium_fuscum ttcttgcgagagctcatctccaatgcctcagatgcactggacaagattcgatacgaatccatcaccgaccccgagaagatcgaggcg--------------------------------------------------cagcccaacttcttcattaaaatcatcccggacaagacgaattccaccctcaccatcgaggactcgggcatcgggatgacgaagaacgagctcgtcaacaacctcggtaccatcgccaagtctggcaccaaggccttcatggaagcgatggccgcggggggcgacatctcgatgatcggacaattcggtgtcggcttctactccgcatacctcgtctccgacaaggttcgcgtggtttcgaagaacaacgatgatgagcagtacatctgggagtccgcggcgggcggctccttcaccgtgcagaaggacacggagctggttcacggtgaggtgaagcgcggcaccaaggtgatctgttacctcaaggaggaccagtccgaattcttggaggagcgccgcctcaaggacctcgtgaagaagcactcggagttcatcggcttccccatcgagctgtacgtggagaaaagcaaagagaaggaggtcaccgactctgaggacgag---gaggaggccaagaag---------gaagaaggc---aaggagggcgacgagcccaagatcgaggaggtg---------------------------gacgaggagaaggagaaggaggag---------------------aaaaagaagaagaccaaaaaggtgaaggaagtctcccacgagtgggaacagctcaacaagaacaagccgttgtggatgaggaagtccgaggatgtgacgaacgaagaatatgcctccttctacaagtctctgtccaacgattgggaagaccacctcgcggtcaagcacttcagcgtcgaggggcagctcgagttccgcgcgctgctcttcgtgccgcgtcgcgcgccctttgacctcttcgagaccaagaagaagcgcaacaacatcaagctctacgtacgccgcgtcttcatcatggacgactgcgacgagctcatgcctgactggctcaatatggtgaagggtgtggtggactccgaagatctgcccctcaacatttcgcgggagacactgcagcagaacaagatcctccgcgtcatcaaaaagaacctcgtgaagaagtgcttggagatgtttgcggagatcgcc---gagaggaaggacgactacaagaagttctatgagcagttcggtaagtgcctgaagctgggcgtccatgaggactccacgaaccgtgcaaaggtcgcggagctgatgcgctaccagacctcgaagtcgggtgacgagcagatcagcctcaaggagtacatcgatcggatgaaggaggggcagtccgacatctactacatcacgggggaaagcatcgcggcggtctcctgttcgcctttcctggagaccttgcgcaagaagggcttggaggtgctctacatggtggatcccatcgacgagtacgctgtgcagcagctcaaggagtttgacggaaagaagcttaagtccgtgaccaaggagggc---cttgacgtggacgac---gaggacgagaagaaaaagatggaggagctcaaagccgagttcgaacccctgactaagcttatgaaagaggtgctgggcgacaaggtggagaaggtggtcatcagctcgcgtatggccgactccccctgtgtccttacgacctccgagtacgggtggagcgccaacatggaacggatcatgaaggca Heterocapsa_triquetra ttcctgcgtgagctgatctccaatgcttcggacgctctggacaagatccgctacgagtccatcacggacccggagaagatcgaggcg--------------------------------------------------cagccgaacttcttcatcaagatcatccccgacaagacgaactcgacgatcacgatcgaggactcgggtatcggcatgacgaagaacgagttgatcaacaacctgggcaccatcgccaagtcgggcaccaaggccttcatggaggccatggccgcgggcggtgacatctccatgattggtcagttcggcgtaggcttctactcggcctaccttgtctcggacaaagtgcgcgtgatcagcaagcataacgatgacgagcagtacatttgggaatcaggtgcgggtggatccttcacggtgcagaaggacactgagctcgtgcacggcgagatcaagcgcggcacgaagatcatctgctacctgaaggaggaccagtctgagttcctggaggagcgccgcctgaaggacctggtgaagaagcactctgagttcattgggttcccgatcgagctctacgtcgagaagtcgaaggagaaagaggtgaccgactccgaggaggat---gaggaggagaagaag---------gacgac------aaggagggcgatgagccgaggatcgaggaggtg---------------------------gatgaggagaaggagaaggaggag---------------------aaaaagaaaaagacgaagaaggtgaaggaggtctcgcacgagtgggagcagctgaacaagaacaagccgctgtggatgcggaagtctgaggacgtgacgaacgaggagtatgcttccttctacaagtcgctgtctaacgactgggaggaccaccttgccgtgaagcacttcagcgtggagggccagcttgagttccgtgccctgctcttcgtgcctcgccgtgcgcccttcgacctgttcgagtcgaagaagaaacgcaacaacatcaagctgtacgtgcgccgtgtcttcatcatggacgactgcgatgagctgatgccggagtggctgaacatgtgcaagggcgtcgttgactccgaggatctgccgctgaacatctcccgcgagacgctgcagcagaacaagatcctgcgcgtgatcaagaagaacctggtgaagaagtgcctggagatgttcgcggagatcgcg---gagaagaaggatgactacaagaagttctacgagcagttcggcaagtgcctgaagctgggtgtgcacgaggactccacgaaccgcaccaaggttgcggagctcctgcgcttcaacacttcgaagtctggcgacgagcagattagcctgaaggagtacgtggaccgcatgaaggagggccagaacgacatctactacatcaccggtgagagcattgcccaggtgtcctcgtcgccgttcctggagacgatgcgcaagaagggcctggaggttctgtacatggtggacccggttgatgagtactgcgtgcagcagctgagggagttcgatggcaagaaactgaaatccacgacgaaggagggc---ctggacatcgaggac---gaggacgagaagaagaagctggaggagatgaaggcggagttcgagccgctcaccaagctgatgaaggaggtgctcggagacaaggtggagaaggtcatcgtcagcggccgaatggctgactcaccctgcgtgctgacgacctcggagtacggctggtcc--------------------------- Karenia_brevis tttctcagagagctgatctccaacgcctcagatgctcttgacaagatccgctatgagtcaatcactgatccggagaagatcgaggca--------------------------------------------------cagcctaatttctacatcaagatcattccggacaagacaaactcttccatcaccattgaggactctggcattggaatgaccaagaatgagctcatcaacaatttgggcaccatcgccaaatccgggaccaaggctttcatggaggccatggctgcgggtggtgacatctccatgattggccaattcggagtaggcttctactctgcatacttggtctctgacaaggtgcgtgtcatcagcaagcacaatgacgatgagcaatacatttgggagtctgctgctggtggttctttcactgtgcagaaggatacggagatggttcatggcgaggtgaaacgcggaacaaaagtgatctgctacctcaaggaggaccaatctgagttcctcgaggagcgccgccttaaggatttggtcaagaagcactctgaattcattggcttccccatcgagctctacgtagagaaatccaaagagaaggaagtgacggattccgaggaggaa---gaagaggaaaagaaa---------gaggaggag---aaggaaggcgatgagccaaagatcgaagaggtt---------------------------gatgaagaaaaggaggctgaggct---------------------aaaaagaaaaaaaccaagaaggtgaaggaagtctcccatgagtgggagcaactaaacaagaacaagcctctttggatgcgcaagtctgaggacgtgaccaatgaggaatatgcttccttttacaagtcgctctccaatgattgggaagatcatctctctgtcaggcacttctccgttgaaggccaacttgagttccgggcacttctttttgtgccgcgccgtgcacctttcgacatgtttgaaagcaagaagaagcgcaccaacatcaagctctatgtgcgccgcgtcttcatcatggatgactgcgatgagcttatgccagagtggctttcctttgtgaagggtgttgtggactctgaagaccttcccttgaacatctcacgcgagactctgcagcagaacaagatcctgcgcgtgatcaagaaaaatcttgtgaagaggtgcttggaaatgttcgcggagattgca---gagaagaaagatgactacaagaagttctgtgagcaattctccaaaaacatcaaacttggcatccacgaggactccacaaacagggccaaggtagcggagctcatgcgataccacacctcaaagtctggtgatgagcagatcagcttcaaggagtacgtcgacaggatgaaagagggtcagaatgacatctactacattaccggtgagagcatcgcagctgtttcctcctcaccctttttggaagccctgcgtaaaaagggcttggaagtgctttacatggttgaccccatcgatgagtatgctgtgcagcagcttaaggagtttgacggcaagaagctcaagagcactaccaaagagggc---ttggacattgacgat---gaagacgacaagaaaaagattgaggagttgaaagctgagtttgagcctctcactaagctcatgaaggaggttctcggtgataaagttgaaaaggtcatcgtaagctcacgtatggccgattcgcc------------------------------------------------------------- Karenia_mikimotoi tttctcagagagctcatctccaacgcttcagatgctcttgacaagatccgttacgagtccatcacggatccagagaagattgaggcg--------------------------------------------------cagccaaatttttatatcaagatcattccggacaagacaaacccttccatcaccattgaggattctggcatcggcatgacaaaaaatgagctcatcaacaacttaggcaccatcgccaaatcagggaccaaggctttcatggaggccatggccgcaggtggtgacatctccatgattgggcaatttggtgtaggcttctactctgcgtatctggtctctgacaaggtgcgcgtcatcagcaagcacaatgacgacgagcagtacatctgggagtcggctgctggcggttccttcactgtgcagaaggataccgagatggtgcacggtgaggtgaaacgtggaacgaaagttatctgctatcttaaggaagaccagtctgagttcctcgaggagcgccgtctgaaggatttggtcaagaagcactccgaatccattggcttccctattgagctctatgtcgagaaatccaaagagaaagaagtaacagattcagaggaagaa---gaagaggaaaagaaa---------gaggaagag---aaggaaggtgatgagccgaagatcgaagaggtc---------------------------gatgaagaaaaggaggcggaggct---------------------aagaagaaaaagaccaagaaggtgaaggaagtttcgcacgagtgggagcagttgaacaagaacaagcccctttggatgcgcaagtctgaggacgtcaccaatgaggagtatgcttctttctacaagtcattgtcgaatgattgggaagatcatctctctgtcaaacacttctctgttgaaggtcaacttgagttccgggcactcctctttgtgccgcgccgtgcaccttttgacatgtttgagagcaagaagaagcgaaccaatatcaaactctatgttcgccgtgtcttcatcatggacgactgcgatgagctcatgccagagtggctttccttcgtcaaaggtgttgtcgattctgaagaccttcccttgaatatctcacgagagaccttgcagcagaacaaaatcctgcgcgtgatcaaaaagaatctagtgaaaaagtgcttagagatgttcgcagagattgca---gagaagaaagatgattacaagaaattttatgagcagttctccaagaatatcaagcttggtatccacgaggactccacaaacagggccaaggtggcggagctcatgcggtaccatacttcaaaatccggtggtgagcagatcagcctcaaggagtacgttgacaggatgaaagaaggtcaaaatgacatctactacattactggtgagagcatcacggctgtttcctcttcacctttcctggaagccctgcgtaagaagggcttggaggtgctttacatggttgaccccgtcgatgaatacgctgtacagcagcttaaagaatttgacgggaagaaactcaagagcaccaccaaggagggc---ttggacatcgacgat---gaagacgacaaaaaaaagatcgaggagctgaaagccgagtttgagcctctcaccaaactcatgaaggaggttcttggtgacaaagttgaaaaggtggttgtgagctctcgtatggctgactcgccctgtgtcctgaccacttcggagtat------------------------------------ Karlodinium_veneficum tttctccgtgagttggtttcaaatgctttcgatgcattggacgagattcggtatgagtcgattacagatcctgagaagatcgaggcg--------------------------------------------------cagcctaacttctatattaagatcattcccgacaagaccaactccaccatcactatcgaagactctggcattggcatgacgaaaaacgaattgatcaataacttggggaccattgcgaagtcaggcaccaaagctttcatggaggcaatggctgctggtggagatatctccatgattggtcaatttggcgtcggcttctactctgcctatcttgtctctgacaaagttcgcgttatcagcaaacacaacgatgacgagcagtatgtgtgggaatcggctgcgggtggttctttcacagttcagaaggacacagaaatggttcatggtgaggtgaagcgtggaaccaaaatcatttgctatttgaaagaagaccagtccgaattcttggaagaacgacgtctcaaggac---gtcaagaagcactccgagttcattggcttcccaatcgagttgtatgtggaaaaatccaaagagaaggaggtcacagattccgaagaggat---gaggaggagaagaaa---------gaagaagac---aaagagggtgacgagccgaagatagaagaggtc---------------------------gacgaggagaaagagaaagaggag---------------------aaaaagaaaaaaatgaagaaggtcaaggaggtgtctcacgaatgggagcagttgaacaaaaacaagcctctgtggatgaggaaatctgaggatgtgacgaacgaggagtacgctgctttctacaagtccctttcaaacgattgggaggatcaccttgcggtgaagcattttattgtggaagggcagttagagttccgtgcgttgctcttcttacctcgacgtgctcccttcgatatgttcgagggcaaaaagaagagaactaacattaagctttacgtgcgctgggtattcatcatggatgattgcgatgagctcatgccagaatggttgtcatacgtaaagggtgttgtagactctgaggacctgccattgaacatttcgcgtgagactctgcaacagaacaagatcttacgcgtgattaagaaaaatctcgtgaagaaatgcctcgagatgtttgccgagatttct---gagaagaaggacgattacaagaagttttatgagcagttctcaaagaacatcaaattgggaattcacgaggactctaccaatcgagctaaggttgcggaactcttgcgttaccacacttcgaagtcaggcgatgagcagattagcttcaaggagtatgtcgaccgcatgaaagagggccagaacgatatttattatatcactggcgaaagcatcgcagcagtatcatcttcgcctttcttggagactctgcgaaagaagggactagaagtcctctacatgaccgaccctgtcgacgaatacgctgtgcagcagctgaaagagttcgatggcaagaagttaaaaagcacaacaaaggagggt---ctggacatcgaagac---gaggacggaaaggaaaaaatcgaggaactcaaggctgagttcgagccactcacgaagctcatgaaagaggtgcttggggacaaagtcgagaaagttatcattagttcacgcatggctgactcaccttgcgtccttacgacctctgagtatggatggtctgc------------------------- Kryptoperidinium_foliaceum tttcttcgggagttgatctccaacgcctccgacgccttggacaagatccgctacgagtccatcacggatccggagaagatcgaggcg--------------------------------------------------cagccgaacttctacatcaagatcatcccggacaaaacgaactcgacgatcacaatcgaggactctggaattggcatgacgaagaacgagttgattaacaacctgggcacgatcgccaagtcgggcaccaaggctttcatggaggcgatggcagctgggggtgatatctccatgatcggacagttcggtgtcggtttctattccgcttatcttgtcgcggacaaggtgcgggtcattagcaaacacaacgacgacgagcagtacatttgggagtctggtgcgggagggtctttcactgtgcagaaggacaccgagcttgtacatggtgagatgaagcgtggtacgaaaatcatctgctatttgaaggaggaccagtcggagttcttggaggagcgccgcttgaaggacctcgtgaagaagcactcggagttcatcggctttcccatcgagttgtatgtggagaagagcaaggagaaggaggtgacggactccgacgaagag---gaggaggggaagaag---------gaggagggt---gcggagggcgacgagcccaagatcgaagaggtg---------------------------gacgaggagaaggagaaggaggcg---------------------aagaagaaaaagaccaagaaagtcaaggaggtctcgcatgagtgggagcagttgaacaagaacaagccgctgtggatgaggaagagcgaggatgtgacaaacgaggagtacgcatccttctacaagtccttgagcaatgattgggaggaccacttggcagtgaagcacttcagtgtggaaggccagctggaattccgcgccctcttgttcgtccctcgccgtgcgccattcgatctcttcgagtccaagaagaaacgcaacaacatcaagttgtacgtgcgccgcgtgttcatcatggatgactgcgaggagttgatgccggagtggctcaacatggtcaagggtgtggtcgactccgaggacttgcccttgaacatttcccgcgaaacgctgcagcagaacaagatcttgcgtgtgatcaagaagaatttggtgaagaagtgcctagaaatgtttgcggagatcgca---gagaaaaaggatgattacaagaaattctacgagcagtttggcaagtgtttgaagctcggcgtgcacgaggactcgacgaaccgcacgaaggtcgccgagttgttgaggtggagcacgtcgaagtcgggcgacgagcagatcagcttgaaggagtatgttgaccgcatgaaggaaggccagtctgatatcttctacatcaccggcgagtcaattgtggcagtgtcgtcctcgcccttcttggagaccttgcgaaagaagggcttcgaggtgttgtacatggtggatcccatcgacgagtactgcgtgcagcagttgaaggagtttgacggcaagaaactgaagtcgacgaccaaggagggc---ttggagttggacgac---gaagacgagaagaagaagttggaggagttgaaggccgagtttgagcctttgacgaagcttatgaaggaggtgctcggagacaaggttgagaaggtggtggtgagctcccgtttggcggactccccatgtgtgctgactacatcggagtacggttggtcc--------------------------- Lepidodinium_chlorophorum tttttgagggagttgatatccaacccgtcggatgcattggacaagatccgctatgagtcaatcacggatcctgaaaagattgaggcg--------------------------------------------------cagccaaacttctacattaagattgtacccgacaagaccaactcaaccttgacaatcgaggattcgggcatcggcatgaccaaaaacgagcttgtgaacaacttgggcaccattgcaaagtctggcacgaaagctttcatggaagccatggctgcaggaggcgatatttctacgattggtcaattcggcgtcggtttttattctgcgtacctggtgtccgacaaagtgcgcgtcgtaagtaaacacaacgatgacgagcagtacgtctgggaatctgctgctggtggttctttcactgtccagaaagacacggaactggtccatggcgaagtaaaacgtggcactaaggtgatctgctacctgaaggaagaccagtcggagttcctcgaggagcgccgtctcaaggacttggtgaaaaaacattctgagttcatcggatttcccatcgagctttacgtcgaaaagtcaaaggaaaaggaagtaacggattcggaggaggaa------gaggaaaagaaa---------gatgatgaagggaaggagggcgatgagccaaagatcgaagaggtg---------------------------gacgaggagaaggagaaagaagaa---------------------aaaaagaaaaaaacgaagaaggtcaaggaagtttcgcacgaatgggaacagctcaataagaataagcctctgtggatgcgaaagtctgaggatgtaacgaatgaggaatacgcaagcttttacaagtcgctctccaatgattgggaagatcatctctcagtgaagcatttcagcgtggaaggtcagctcgaattccgtgcacttctttttgtgccgcgccgggcgcctttcgatctctttgaatcaaaaaagaagcgcaacaacatcaagctatacgttcgacgtgtcttcatcatggacgattgcgatgagctcatgccagagtggctgaatttcgtgaagggggttgtggactccgaggatttgcctttgaacatctcgcgtgagacgctacagcagaacaaaattcttcgcgtgatcaagaaaaacctcgtgaagaaatgcttggagatgttcgctgagattgca---gagaaaaaggacgactacaaaaagttttatgaacaatttggcaagtgcctgaagcttggtgttcatgaagattcgaccaaccgcaccaaggttgctgagttaatgcgctatcagacttcgaagtccggcgacgaacagatcagtttcaaggagtacgttgatcggatgaaggagggccaaaatgatatttattacatcacgggtgagagcatcgcggccgtctcatcttcgccattccttgagactctgcgcaaaaaaggccttgaggtgctctacatggttgaccctatcgacgagtacgccgtgcagcagctgaaggagttcgacggcaaaaaaatgaaatcaattaccaaggaaggc---ctcgacattgatgat---gaagatgagaagaaaaagatggaggagctcaaggcagagttcgagccacttacgaagttgatgaaggaggtcttgggtgacaaggttgaaaaggtcattgtgagctcccgcatggccgactctccttgtgtgctcaccacctcagagtatggct-------------------------------- Noctiluca_scintillans -------------tcatctcgaattcgtccgatgccctcgacaagatccggtacgagtccatcacagatccggagaagatcgaagcc--------------------------------------------------cagccgaacttcttcatcaaaatcatccctgacaagaccaattcgacaatcacgatcgaggattctggcattggcatgacgaagaacgagctcgtgaacaacctcggcactatcgccaagtctggtaccaaggctttcatggaggccatgagtgcgggcggtgacatctccatgatcggacagttcggtgtcggcttctactcggcctatttggtgtcggacaaggtacgtgtggttagcaagaacaacgacgatgaacagtacatctgggagtcggccgctggcggttctttcaccgtgcagaaagacaccgaaatggtgcacggagaggtcaagcgaggcacgaagatcatttgttacttgaaggaagaccagtccgaattcttggaggaacgtcgcttgaaggatctggtgaagaagcattctgaattcatcggtttccccatcgagctttatgtggagaaatcgaaggagaaggaagttactgattcggaggaagat---gaagaggaaaagaaa---------gaggaggagggcaaggagggtgatgagcccaaaattgaggaagtt---------------------------gacgaggagaaagaaaaagaggag---------------------aagaaaaagaaaacgaagaaggtgaaggaggtgtcccacgagtgggagcagctcaacaagaacaaacccttgtggatgagaaaatcggaggatgtgacgaacgaggagtacgcatcgttctacaaatcgttgtcgaacgactgggaagaccatttgtctgtgaagcatttcagcgttgagggccaacttgagttccgtgcgttgttgttcgtgccccgccgtgctcccttcgatttgtttgagacaaagaagaaacgcaacaacatcaagttgtatgtgcgtcgcgttttcatcatggacgattgtgacgagctgatcccagagtggttgaattttgtgaaaggcgtcgtggattcggaggatcttcccctgaacatctcgcgagagactctgcagcagaacaagattctgcgtgtcatcaagaagaatctagtgaagaagtgcctcgagatgtttgcagaaattgcc---gagaagaaggatgactacaagaagttctacgaacagttcggcaagtgcctgaaacttggaatccatgaggattcaaccaatcgaaccaagattgctgagttgttgcggttcagtacttcgaagtctggtgatgagcagatcagtttgaaggagtacgtcgatcgtatgaaggaagggcagaatgacatttactacatcacgggtgagagcattgccgtcgtgtcatcgtctccattcttggaaaatttgcggaagaagggtttggaggtactgtacatggtggaccctgtagatgagtacgcagtgcaacagctcaaggaattcgacgggaaaaagctgaagtcgacgaccaaggagggg---ttggacatcggcgat---gaggatgagaagaaaaagcttgaggagctgaaagccgagttcgaaccgttgacgaagttgatgaaggaagttcttggggacaaggttgagaaggtgatggtcagcgacagaatcgtagattcaccttgcgttctgactacgtcggagtacggttggtct--------------------------- Oxyrrhis_marina TTTTTGCTTGAGTTGATCTCCAACGCATCTGATGCGCTTGACAAGATCAGGTACGAGTCGATCACAGATCCGGAGAAGGTGGAGGCC--------------------------------------------------CAGCCCGACTTTTTCATCAAGATTGTGCCCGACAAGACGAACAACACCCTGACGATCGAGGATTCGGGGATCGGGATGACGAAGAACGAGCTGGTGAACAACCTGGGGACGATCGCGAAGTCCGGGACGAAGGCTTTCATGGAGGCGATGGCCGCTGGCGGAGACATGTCGATGATCGGTCAGTTTGGTGTGGGCTTCTACTCGGCATACTTGGTGTCGGACAAGGTGCGAGTGATCTCGAAGAGCAATGATGATGAGCAGTACGTCTGGGAGTCTGCTGCAGGTGGTTCTTTCACTGTGGTGAAGGATGAGGAGCAGGTGCACGGCGAGGTGAAGCGCGGGACGAAGATTGTGTGCTTCTTGAAGGAGGACCAGACTGAATTTCTGGAGGAGCGTCGTTTGAAGGATTTGGTGAAGAGGCATTCTGAGTTCATCGGCTTTCCGATCGAGTTGTACGTGGAGAAGTCATCGGAGAAGGAGGTGACTGACTCCGAGGACGAG---GAGGAGGAGAAGAAG---------GAAGAG---------GAGGGTGATGAGCCGAAGATCGAGGACGTG---------------------------GATGAGGACGCCCAGAAGGACGAG---------------------AAGAAGAAGAAGACGAAGAAGGTGAAGGAGGTGAGCCACGAGTGGGAGCAGCTGAACAAGAACAAGCCGTTGTGGATGAGGAAGGCTGAGGATGTGACGAACGAAGAGTATGCTTCTTTCTACAAGTCGTTGTCCGACGACTGGGAGGACCATTTGGCTGTGAAGCACTTTTCTGTGGAGGGCCAGCTTGAGTTCAAGGCTTTGTTGTTCGTGCCYCGACGCGCYCCSTTCGACACCTTCGAGCAGAAGAAGAAGCGTAACAACATCAAGCTGTACGTGCGTCGCGTGTTTATCATGGATGATTGTGAGGAGCTGATTCCTGAGTGGTTGTCGTTTGTGAAGGGTGTGGTGGACTCTGAGGATTTGCCTTTGAACATTTCTCGTGAGACATTGCAGCAGAACAAGATCTTGCGAGTGATCAAGAAGAAYTTGGTGAAGAAGTGCTTGGAGGTGTTCAACGAGATYGCG---GAGAAGAAGGATGACTACAAGAAGTTCTACGAGCAGTTTTCGAAGAACTTGAAGCTGGGTGTGCATGAGGATTCGACAAACCGAGGGAAGYTGGCTGACTTGATGCGATTCCCGACCTCGAAGTCTGGGGATGAGCAGATTTCTTTGAAGGAGTACTGCGATCGCATGAAGGAGGGTCAGAATGACATCTTCTACATCACKGGGGAGAGTGTGGCTCAGGTGTCGACTTCTCCTTTCATCGAGGGTCTGAGGAaGAAGGGGTACGAGGTGCTGTACTTGGTTGACCCGATCGATGAGTACATGGTGCAGCAGCTGAAGGAGTACGAGGGGAAGAAGCTGAAGTCGTGCACGAAGGAGGGS---TTGGACCTTGAGGAT---GAAGATGAGAAGAAGAGCATGGARGAGCTAAAGGCTGAGTTCGAGCCGCTGAGCAAGCTGATGAAGGAAGTGYTGGGAGACAAGGTGGAGAAGGTTCAGGTGAGTGGTCGCGTGGTGGACTCACCTTGTGTATTGGTGACGTCTGAGTACGGGTGGACCGCAAATATGGAGCGAATCATGAAG--- Pentapharsodinium_dalei --------------------------------------------------------------------------------------------------------------------------------------------------------aTCAAGATCATCCCCGACAAGACAAACTCTACAATCACCATCGAGGACTCGGGCATCGGCATGACGAAGAACGAGCTCATCAACAACTTGGGCACCATCGCCAAGTCTGGCACCAAGGCCTTTATGGAGGCCATGGCGGCGGGAGGCGACaTCTCCATGATTGGGCAGTTCGGTGTGGGCTTCTACTCCGCGTACTTGGTCTCGGACAAGGTCCGGGTGGTGAGCAAGCACAATGACGACGAGCAGTACATCTGGGAGTCGGGCGCAGGCGGCTCGTTCACAGTGCAGAAGGACACGGAGATGGTGCACGGCGAGATCAAGCGCGGCACCAAGATCATCTGCTACTTGAAGGAGGACCAGTCAGAATTCCTGGAGGAGCGCCGCCTCAAGGATTTGGTCAAGAAGCACTCCGAGTTCATCGGCTTCCCCATCGAGCTCTACGTGGAGAAGTCCAAGGAGAAGGAGGTGACGGACAGCGAGGAGGAA---GAGGAGGAGAAGAAG---------GAGGAGGGA---GCGGAGGGCGACGAGCCCAAGATTGAGGAGGTT---------------------------GACGAGGAGAAGGACAAGGAGGAG---------------------AAGAAgAAAAAGACCAAGaAGGtGAAGGAGGTGAGCCAcGAATGGGAGCAGCTCAACAAGAACAAGCCGCTcTGGATGAGAAAATCCGaGGACGtGACCAATGAGGaGTAcCCCTCGTTTTACAAGTCCTTGTCTAATGATtGGGAGGACCACCTCGCTGTGAAGCACTTCAGCGTCGAGGGGCAGCTCGAGTTCCGCGCGCTGCTCTTCGTCCCCCGCCGTGCCCCCTTCGACCTCTTTGAGTCCAAGAAGAAGCGCAACAACATCAAGCTCTACGTGCGCCGCGTCTTCATCATGGATGATTGCGACGAGCTCATGCCCGAGTGGTTGAACATGGTCAAGGGAGTGGTGGACTCTGAGGACTTGCCCTTGAACATCTCCCGTGAGACCCTCCAGCAGAACAAGATTCTCCGCGTTATCAAGAAGAACCTTGTGAAGAAGTGCCTTGAGATGTTTTCCGAGATAGCC---GAGAAGAAGGACGATTACAAAAAGTTCTACGAGCAGTTCGGTAAGTGTCTGAAGTTGGGCGTGCACGAGGACTCAACCAATCGGACCAAGGTCGCTGAGCTGCTGCGGTGGCACACGTCAAAGTCGGGTGATGAGCAGATCAGTCTCAAGGAGTACATTGATCGCATGAAGGAGGGTCAGAACGACATCTTCTACATCACGGGCGAGAGCATCGTCGCTGTCTCTTCCTCGCCGTTCTTGGAGACTTTGAGGAAAAAGGGCCTCGAGGTGCTGTACATGGTGGACCCCGTCGACGAGTATTGCGTCCAGCAGTTGAAGGAGTTCGATGGCAAGAAGTTGAAGTCCACCACCAAGGAAGGC---TTGGAGCTGGACGAC---GAGGATGAGAAGAAAAAGTTGGAGGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------- Peridinium_willei tttttgcgtgagctcatctccaatgcctccgacgctctggacaagatccgctacgagtcaatcaccgatcccgagaagatcgaggct--------------------------------------------------cagccaaacttctacatcaagatcatcccggacaagacaaattccacgattaccatagaagactctggcatcgggatgactaagaatgagctgattaacaacttagggacgatcgccaaatctggcactaaggcctttatggaggccatgtccgccggtggcgacatttccatgatcggccaatttggcgtcggcttctactccgcctacctggtgtctgacaaggtgcgggtgatcagcaagaacaacgacgacgagcaatacgtttgggaatccggtgctggcgggtccttcactgtgcagaaagacacggagcttgtgcacggcgaaatcaagcgcggcaccaagatcatctgctacctcaaggaggaccagtccgagttcctggaggagcggcgcctgaaggatctagtgaagaagcactcggagttcatcggcttcccgatcgagctgtacgtggagaagtccaaggagaaggaggtcacagattccgaggaggag---gaggagggcaagaag---------gaggtggac---aaggagggcgatgagcccaagattgaggaggtc---------------------------gatgaggagaaggagaaggaggag---------------------aagaagaagaagaccaagaaggtcaaggaggtgtcgcacgagtgggagcagctcaacaagaacaagcccttgtggatgcgcaagtcagaagacgtcaccaacgaggagtacgcctccttctacaagtccttgtccaatgactgggaagaccaccttgccgtgaagcatttcagcgtcgagggacaactggagttccgggcacttcttttcgtaccgcgccgcgcgcccttcgacctgtttgagagcaagaagaagcgcaacaacatcaagctgtacgtgcgccgggtcttcatcatggacgactgcgacgagctcatgcccgagtggttgaacatggtcaagggtgtggtggactccgaagacctgcctctcaacatctcgcgcgagacgctgcagcagaacaaaattttgcgcgtcatcaagaagaacttggtcaaaaagtgcttggagatgttctctgagatcgcg---gagaagaaggacgactacaagaaattctatgagcagttcgggaagtgcctcaagctcggcatccacgaggattcgactaaccgcacgaaggtggcggagctgatgcgctaccacacgtcaaagtccggggacgagcagatcagcctcaaggagtacgtggaccgcatgaaggagggtcagaaagacatctattacataacaggcgagtccatcgtggccgtgtcctcttcccccttcttggagactctgcgtaagaagggcctggaggtcatctacatggtcgatcccgtcgatgagtatgcagtgcagcagctgaaggagttcgacgggaagaagttgaagtcgaccacaaaggagggc---ctggacattgaagat---gaggatgagaagaagaagcttgaggagttgaaggcggagttcgagccgctcaccaagcttatgaaggaggtgctcggagacaaggtggagaaagtgctggtcagctcccgcatggccgactcgccctgcgtcctcactacctcggaatatgggtggtcggcgaacatggaaagcataatgaaggca Perkinsus_marinus ttccttcgtgagctYatctcSaaYgcctcYgatgcWttggMtaagatYcgWttcgagtccatcactgatcccgagaagatcgagaatgtaagtgaaagggtcctttttgttgcatttgtcatgtttgttttctttaggagcccgagttcaaaattaagatcatccccgataagaccaacggaactctcactgttgaggatacaggaattggtctcactaagactgagatgatcaacaacttgggaaccatcgccaagtctggtaccaaggccttcatggaggccattcaggccggtggtgacatctctatgatcggccagttcggtgttggtttctactccgcctacctcgttgctgacaaggtccgtgttgtctcgaagtccaacgatgacgatcagtacatctgggaatctgccgctggcggttccttcagtgtcaccaaggataccgagtttgctgatggtcacatcaagcgtggtactaaggtcatcctttatctcaaggaggatcagaccgagttccttgaggagcgtcgtctgaaggatttggtcaagaagcactctcagttcattggcttccccattgagctctacgtcgagaaatctactgagaaggaggtgaccgactccgaagacgag---gaggaggataaggagaagaaggatgacgagaagaaggacgagtcggaggagcccaagattgaggaggtc---------------------------gaggacgatgaggagaagaaggaaggcgaggaggag---ggtgataagaagaagaagaccaagaaggtcaaggaggtcactcacgattgggagcaattaaacaagaccaagccgatctggatgcgcaagcctgaggatgtgaccaacgaggagtatgcttccttctacaagtctcttactaacgattgggagggatctctggctgtcaagcacttcgctgttgagggtcagctcgagttcaaggctctcctgtttgtgccacgtcgtgcccccttcgacttgttcgagaacaccaagaagcgcaacaatattaagttgtacgtccgccgtgtcttcatcactgatgactgtgaggagctcatgcccgactggttgtccttcatcaagggtgttgtcgactccgaggatcttcctttgaacatctcccgtgagacccttcagcagaacaagatccttcgtgtcatcaagaagaacttggtgaagaagtgYttgcagttgttcgaggagatggccaccgagaagcctgatgattacaagatcttctacgagcagttctccaagaacatcaagttgggcatccacgaggacagcactaaccgtgagaagatcgccgagttgctgaggttcaagtcttccaagtctggtgaggatatggtgtccttccaggagtatgttgaccgcatgaaggagggtcagaaggatatctattacatcactggtgagagtatcgctgccgtgtcctcaagtccctttatcgagactcttcgcaagaagggttatgaggtcctctatttggttgatcctattgatgagtacgccgtgcagcagYtccgtgagttcaacggtcacaagctgaagtccatcactaaggagggtgatctcgatctcaatgagtctgacgaggagaagaaggctttcgaagaggagaaggctgacttcgagcctctctgcaagctcgttaaggaggtcttgggcgacaaggttgagaaggtcatcgtctctcagcgtgtgtcggagtctccttgcgtgttgaccacctccgagtacggctggaccgccaacatggagaggatcatgaaggcg Polarella_glacialis tttctgcgcgagctgatctccaacgcatcagatgccttggacaagatccgctatgagtcgatcaccgatcctgaaaagatcgaggca--------------------------------------------------cagcccaacttctacatcaagatcattcctgacaagaccaacagcaccatcaccatcgaggactccggcattggcatgaccaagaacgagctgatcaacaacctgggcaccattgccaagtcgggaaccaaggctttcatggaggccatggccgcaggaggcgacatctccatgattggtcagttcggcgtcggcttctacagttcatacctggtgtcagacaaggtccgggtgatcagcaagaacaacgacgacgagcagtacatttgggagtccggcgctggcggctccttcaccgtgcagaaggacacggagttggtgcacggcgaggtgaagcgtggcaccaagatcatctgctacctgaaggaagaccagtcagagttcctggaagagcgccgcctgaaggacttggtgaagaagcactctgagttcatcggcttccctatcgagctttacgtggagaagtccaaggagaaggaggttactgactccgaggatgag------gaagagaagaag---------gaggaggag---aaggagggcgatgagcccaagatcgaggaagtg---------------------------gacgaggagaaggagaaggaggaa---------------------aagaagaagaagaccaagaaggtcaaggaggtctctcacgagtgggagcagctcaacaagaacaagcctttgtggatgcgcaagtccgaggacgtgaccaacgaggagtactcctccttctacaagtcgctctccaacgactgggaggaccacctggccgtgaagcacttcagcgtcgagggccagctggagttcagggctctgctcttcgtccctcgccgcgcgcctttcgacctgttcgagtccaagaagaagcgcaacaacatcaagctgtacgtgcggcgcgtcttcatcatggacgactgcgacgagctgatgcctgagtggatgaacatggtgaagggcgtggtcgactctgaggacctgcctcttaacatctcccgtgagaccctgcagcagaacaagatcctgcgcgtgatcaagaagaatctcgtgaagaagtgcctggagatgttcgccgagatcgcc---gagaagaaggacgactacaagaagttctacgagcagttcggcaagtgcctcaagctcggcgtccacgaggactccaccaaccgcaccaagatcgccgagctgctgcgcttcagcacctccaagtcaggagatgagttgatcagcctcaaggagtacgtcgaccgcatgaaggaaggtcagaacgacatctactacatcacgggcgagagcatcacacaggtgtcctcgtctcctttcctggagaacctgcgcaagaagggccttgaggtcctgtacatggtggaccctgtggacgagtactgcgtgcagcagctcaaggagttcgacggcaagaagctcaagtccacgaccaaggagggc---ttggacatcgaggac---gaggacgagaagaagaagctggaggagctgaaggccgagttcgagcctctgaccaagctcatgaaggaggtgttgggcgacaaggtggagaaggtcatggttagcggccgcatggccgattcgccttgtgtgctgaccacctccgagtacggctggtccgcgaacatggagcgcatgatgaaggcg Prorocentrum_micans gtcttgcgcgagctgatctccaacgcttccgacgccctggacaagatccgctacgagtccatcacggatccggagaagatcgaagcc--------------------------------------------------cagcccaatttctatatcaagatcatcccagataagacgaattccactatcaccatcgaggattcaggcattggcatgaccaagaacgagctaatcaacaacctcggcaccatcgccaagtcgggcaccaaggcgttcatggaggcaatggctgcaggcggcgacatctccatgatYgggcagttcggcgttggcttctactcWgcctacttggtMtctgacaaagtgcgagtggtcagcaagcacaacgacgacgagcaatacatMtgggagtccggagccggtggctccttcactgtacagaaggacactgagctggtccatggggagatcaagcgcggtaccaagatcatctgctatctgaaggaagatcagtccgagttcttggaggagcgccgcctgaaggacctcgtcaagaagcactcggagttcattggcttcccaatcgagttgtacgtggagaaatccaaggagaaggaggtcacDgactctgaggacgag---gaggaggagaaaaag---------gacgaggaggggaaggagggYgacgagcctaagatcgaggaggtg---------------------------gacgaggagaaggagaaggaagcc---------------------aagaagaagaagacgaagaaggtcaaggaggtgtcccacgagtgggagcagttgaacaagaacaagcccctttggatgcgcaagtccgaggatgttacgaatgaggaataYgcctctttctacaagtctctgttaaacgactgggaggaccacctggcggtcaagcacttcagcgtcgaggggcagctcgaattccgcgcgctgcttttcgtgccccggcgtgcgccgttcgacttgttcgaatcaaagaaaaagcggaacaacatcaaattgtacgtgcgtcgcgtDttcatcatggatgattgcgacgagctcatgccagagtggctcaacttcgtcaagggcgtggtcgactccgaggacctgccgctcaacatttcccgcgagaccctgcagcagaacaagatcctccgtgtcatcaaaaagaatttggtRaagaagtgYttggagatgttcgcagagatcgca---gagaagaaggacgactacaagaaattctacgagcagttcggcaagtgcctggagcttggagtccacgaggattccaccaaccgcacgaaggttgcKgagctgatgcgctaccaYacatccaagtccggagacgagcagatcagcYtRaaggagtatgtcgatcgtatgaaggagggtcagaacgacatctattacatcactggcgagagcatcgcagccgtRtcctcctcgcccttcttggagacgcttcgcaagaagggcctcgaggtgctatacatgaccgaccccattgacgagtactctgtgcagcagctgaaagaattcgatgggaaaaagctgaagtcgacgacYaaggagggc---ctggacttggaggat---gaagacgagaagaagaagcttgaggagatgaaggcRgaattcgagccactgacaaagctcatgaaagaggtcctSggcgacaaggtcgagacggttgtggtaagctcccggatggccgactcgccctgcgttctgaccacctcggagtatgggtggtcYgccaacatggagagcatMatgaaggcg Prorocentrum_minimum ttcctgcgcgagctcatttccaatgcgtcagatgccttggacaagatccggtacgagtccatcaccgatcctgacaagatcgaggcc--------------------------------------------------cagccgaatttctatatcaagatcgttcccgacaagaccaattccaccatcacgatcgaggattccggcatcgggatgaccaaaaacgaattgatcaacaatctcggcaccatcgccaagtccggcaccaaggccttcatggaggcaatggcagccggtggcgacatctccatgatcgggcagttcggagtcggtttctattccgcgtacctcgtctcggacaaggtgcgcgtgatcagcaagaacaacgacgacgagcaatacatctgggagtccggggctggtggctccttcacggtgcagaaggacacagagatggtgcacggggagatcaagcgcggcactaagatcatttgttacttaaaggaggatcagtccgaattcctggaggaacgccgcttgaaggatcttgtcaagaagcactcggagttcatcgggttccccatcgagttgtacgtggagaagtccaaggagaaggaagttacggattccgaggacgag---gaggaggagaagaag---------gacgag------aaagaaggcgatgagccgaagatcgaggaggtc---------------------------gacgaggagaaagagaaggaggag---------------------aaaaagaaaaagacaaagaaggtcaaggaagtatcccacgaatgggagcagcttaacaagaacaagccgctgtggatgcgcaagtccgaagacgtgaccaacgaggagtacgcctcgttctacaagtcactgtccaacgactgggaggaccacctggccgtaaagcacttcagcgttgagggccagctggagttccgcgcgctgctcttcgtgccgcgccgggcacctttcgatctgtttgagtccaagaagaagcgcaacaacatcaagctgtacgtacgacgcgtctttatcatggatgattgcgacgagctgatgcccgagtggctcaattttgtgaagggcgtggttgactccgaggatttgccgctgaacatctcccgcgaaacgctgcagcagaataagatcctgcgagtgatcaagaagaacctcgtcaagaagtgcctcgagatgttcgcggagatcgcc---gagaagaaggacgactacaagaagttctacgagcagttcggcaagtgcctcaagcttggcgtgcacgaagactccaccaaccgcaccaaggtcgcggagcttatgcgctaccacacctcgaagtctggagatgagatgatcagcctgaaggagtacgtggaccgcatgaaggaggggcagaatgacatttactacatcacgggggagagcatcgcagcggtgtcctcctcgcctttcttggaaacgttgcgcaagaagggccttgaggttctctacatgaccgatcccatcgatgagtactccgtgcagcagctcaaggagtttgacggcaagaagctcaagtcgacgaccaaggagggc---ttggacctcgaggac---gaggacgagaagaagaaactggaggagctgaaggcagagttcgagccgctgaccaagcttatgaaggaggttctgggcgacaaggtggagaaggtggtggtcagttcgcgcatggcggactcgccctgtgtgctgacgacctcagagtacggctggtccgcgaacatggaacgcatcatgaaggca Protodinium_simplex ttcttgcgcgagttgatttcgaacgcctctgacgccctcgataagatccgatatgagtcaatcacggatcctgacaaggtc--------------------------------------------------------cagcccaacttcttcatcaagatcgtcccagataagacaaattccaccttgacgatcgaagattctggcattggcatgaccaagaacgaacttgtgaacaacttgggaaccatcgccaagtcgggaacaaaggccttcatggaggcgatgtcagcagggggtgacatttccatgattggtcagttcggggtgggcttctactccgcataccttgtctctgacaaggtgcgcgtggtgagcaagcacaatgatgacgaacagtatgtctgggaatctgcagctggtggttctttcaccgtgcagaaagacaca---------------------aaaagaggcaccaaaatcatctgctacttgaaggaagatcagtccgagttccttgaggagcgccgtctgaaggacttggtgaagaagcacagcgagttcatcggcttccccatcgagctctacgtggaaaagtccaaggagaaggaggtgact---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aaggaggtctctcacgaatgggaacagctgaataagaacaagccattgtggatgcgaaagtctgaagatgtgaccaacgaggagtatgcctccttctacaagtccttgtcaaatgactgggaagaccacctctcagtgaagcactttagtgttgaggcccagcttgagttccgtgcgctgcttttcgtaccccgtcgtgctcccttcgatcttttcgagacgaagaagaagcgcaacaacatcaaactctatgttcgccgggtctttatcatggatgactgcgacgagctcatgccagagtggcttaacttttgtaagggggtcgtggattctgaagatctgccgcttaacatctctcgtgagaccctccaacagaataagatccttcgtgtgatcaagaaaaaccttgtcaaaaaatgcctcgagatgttcgcggagattgct---gagaagaaggacgattacaagaaattctacgagcaattcggaaaatgcctcaagctcggggttcacgaagactcgacgaaccgtgttaaggtggcagagctcatgcgccaccaaacgtcgaaatccggggacgagctgatcagcttcaaggagtacgtcgatcgtatgaaggaaggacagaatgacatatactacatcacaggagagagcgttgcggcagtctcatcctcaccgttcttggagaatctccgcaagaaaggtttggaagtgatctacatggttgaccccatcgatgagtacgccgttcagcagctgaaggagtttgacggtaagaagctgaagtccgttacgaaggagggc---ttggatatcgatgat---gaggacgagaagaagaagatggaagagcttaaggcggagtttgagcctctcacgaagctcatgaaggaggtgctcggtgacaaggtcgaaaaggtcgtaatcagctctcgcatggctgattccccttgcgtcctcactacgtctgagtacggctggtccgcca----------------------- Scrippsiella_trochoidea ttcctccgcgagctcatctccaatgcttcagacgccttggacaagatccgctacgagtccatcacggacccggagaagatt--------------------------------------------------------cagcccaacttctacatcaagatcatccctgacaagaccaactccaccatcaccatcgaggactccggcatcggcatgacgaagaacgagctgatcaacaacctcggcaccattgccaagtcaggcaccaaggcgctcatggaggccatggcggcgggtggcgatatctccgtgatcggccagttcggcgtgggcttctactctggctacctggtgtcagacaagatccgtgttgtgagcaagcacaacgatgacgagcagtacatctgggagtcgggagccggcggctccttcacggtgcagaaggacacc---------------------aagcgcggcacgaagatcatctgctacttgaaggaggaccagtccgagttcctcgaagagcgccgtctcaaggacttggtgaagaagcactcggaattcatcggcttcccgatcgagccctacgtggagaagtccaaggagaaggaggtgacc---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aaagaggtctcccatgagtgggaacagctgaacaagaacaagcctccttggatgaggaagtcagaggacgtgaccaacaaggagtacgcctccttctacaagtcgctgtcgaacgattgggaggaccatctcgccgtgaagcacttcagtgtcgaagggcagctcgagttccgcgccctgctcttcgtgccgcggcgcgcgcctttcgacctcttcgagtccaagaagaagaggaacaacatcaaattgtacgtgcgccgtgtcttcatcatggatgattgcgatgagctcatgcccgaatggctcaatatggtcaagggcgtcgtggattcggaggatctgccgctgaacatctctcgggagacattgcagcaaaacaagatcctccgtgtcatcaagaagaaccttgtgaaaaagtgcttggagatgttcgccgagatcgcg---gagaagaaggacgactacaagaagttctacgagcagtttggcaagtgcctgaagctcggcgtccatgaggattccaccaaccgaacaaaggtggcggagctgctgcgcttccacacctcgaagtcgggcgacgagcagatcagcctgaaggagtacgtggaccgcatgaaagagggccagaacgatatctattacatcacaggcgagagcatcacggccgtgtcatcctctccatttttggagacccttcgcaagaagggcttggaggtgttgtacatggtggacccagttgacgagtattgcgtgcagcagttgaaggagttcgatggcaagaaactcaagtccacgaccaaggagggc---ttggacattgaggac---gaggacgagaagaagaagcttgaggaattgaaggctgagtttgagccattgaccaagctcatgaaggaggttctcggcgacaaggtggagaaggtcctcgtgagctcgcgcatggccgattccccttgcgtgcttacgacctcggagtacggctggtcggccaacatggaacgcatgatgaaggcg Spiniferodinium_galeiforme ttccttcgagagctgatctcgaacgcctctgatgccttggacaagatccgctatgagtccatcacggacccagagaagattgag--------------------------------------------------------ccgtccttccacatcaagattgttcccgacaagacgaactcgacgctgacagtggaggacacgggaatcggcatgacgaagaacgagctcgtcaacaatttgggcaccatcgcaaagtcgggcacgaaggccttcatggaagctatggccgctggtggtgacatatcaatgattggccagtttggcgtcggcttctactctgcatatcttgtgtcggacaaggtccgcgtcgtgagcaaacacaacgacgacgagcagtacatctgggagtcaggggctggtgggtccttcacagttcagaaggacacg---------------------aagcgaggcaccaaagtgatctgttacttgaaggaggaccagtctgagttcctggaggagcgcaggctgaaggatctggtgaagaagcactccgagttcatcggcttccccattgagctctacgtggagaaatcaaaggagaaggaagtgagc---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aaggaggtgtcgcacgagtgggagcagctgaacaagaacaagccactgtggatgcggaagtcggaagacgtcacgaatgaggagtatgcttctttctacaagtctctctcgaatgactgggaagaccacttgtccgtgaagcacttcagcgtggaggggcagctcgagttccgggctctgctcttcgtgccgcgccgcgcacccttcgatctcttcgagtcgaagaagaaacggaacaacatcaaactgtacgttcgacgggttttcatcatggatgactgcgatgagctcatgccagagtggctcaattttgtgaagggagtggtcgactctgaggaccttcccctgaacatctctcgtgagaccttgcagccgaacaagatcctgcgagtgatcaagaagaatcttgtgaagaagtgcctcgagatgtttgcagagatagcg---gagaagaaggatgactacaagaagttctacgagcagtttggcaagtgccttaagctcggcgtccatgaggactccaccaaccgcaccaaggttgcagagctgctgcgcttctccacgtccaagtcgggagatgagctgatcagtctgaaggagtacgtggaccggatgaaagaaggtcagagtgacatcttctacattaccggcgagagcatagcggtggtgtcgtcatcgccctttctggagacccttcggaagaaggggtacgaggtgctttacatggtcgatcccatcgatgagtattgcgtgcagcagctgaaggagttcgacgggaagaagctgaagtcgacaactaaggaggga---ttggacctcgatgac---gaggatgagaagaagaaggtcgaggagcagaaggcagagttcgagccattgacgaagctcatgaaggaggttcttggcgacaaggtggaaaaggtgctggtgagctcgcgcatggcggactcgccgtgtgtcctaaccacctctgaatacggctggtctgctaatatggagcgtatcatgaaggca Thecadinium_kofoidii ttcctgagggagctgatttccaatgcgtcggacgcgctggacaagatccgctatgagtccatcacggacccggagaagatc--------------------------------------------------------cagccgaacttctacatcaagatcatccccgacaagaccaattcgaccatcacgattgaggactccggcataggtatgtcgaagaatgagctcatcaacaacctagggaccattgcaaagtccggcacgaaggccttcatggaggccatggccgcggggggtgacatctccatgattggccagttcggcgttggcttctactcggcctacctggtctcagacaaggtgcgagttgtcagcaagaacaacgacgacgagcagtacatctgggaatccggagcaggcggttccttcacggtccagaaggacacg---------------------aagcgtggcaccaaggtgatctgctacctcaaggaggatcagtcggagttcctggaggagcgccgcctcaaggatttggtgaagaagcattccgagttcattggcttcccgattgagctctacgtcgagaagtctaaggagaaggaggtgacc---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aaggaggtctcgcacgagtgggagcagctgaacaagaacaagcccttgtggatgcggaagtccgaggatgtcacgaatgaggagtattcctccttctacaagtccctctcgaacgattgggaggaccatctgtctgtcaagcacttcagcgtcgaggggcagcttgagttccgcgctttgctcttcgtgccccgtcgggcacctttcgacttgttcgagtcgaagaagaagaggaacaacatcaagctgtacgtgcgccgtgtgttcatcatggatgactgcgacgagctgatgccagagtggctcaacatggtgaagggcgtagttgactcggaggatctgcccttgaacatttcgcgtgagactctgcagcagaacaagatcctgcgcgtaattaagaagaacctggtgaagaagtgcctggagatgttcgccgagattgcg---gagaagaaggacgactacaagaagttctacgagcagtttggtaagtgcctcaagcttggcgttcacgaggactcgacgaaccgcaccaaggtcgctgagctgctgcggttccacacgtcgaagtcaggcgatgagcagattagcttcaaggagtacgtcgatcgcatgaaggagggtcagaatgacatctactacatcactggtgagagcatcactgctgtgtcctcgtcgcccttcctggagaacttgcggaagaaggggatcgaggtgttgtacatggtggacccggtcgatgagtacgctgtgcagcagctcaaggagtttgatggcaagaagctgaagtcaaccaccaaggagggc---ttggacatcgaggat---gaggacgagaagaagaagctcgaggagctgaaggcagagttcgagcctctcaccaagctgatgaaggaggtcctcggggacaagaccgagaaggtggtggttagcggacgtatggctgactctccatgcgttctcaccacctctgagtatgggtggtctgcaaatatggaacgtattatgaaggcg Theileria_parva TTCCTTCGTGAACTCATTAGCAACGCTAGCGACGCACTGGAAAAAATTAGGTATGAGGCAATCAAGGATCCAAAGCAAATCGAGGAT--------------------------------------------------CAACCCGATTACTATATCAGGCTGTATGCCGACAAGAACAACAACACCCTCACAATCGAAGATTCCGGTATTGGCATGACCAAAGCCGACCTCGTGAACAACCTCGGTACAATTGCCAAATCCGGCACAAGAGCATTCATGGAGGCACTGCAAGCAGGCTCGGACATGTCAATGATCGGACAGTTTGGTGTCGGTTTCTACTCAGCATACCTGGTCGCAGATAAGGTGACAGTAGTGTCCAAGAACAACGCAGACGACCAGTACGTCTGGGAGTCAACAGCCTCAGGCCACTTTACAGTGAAGAAGGACGACTCG------CACGAGCCGCTCAAAAGAGGAACTAGACTAATACTGCACTTGAAGGAGGACCAAACTGAGTACCTTGAGGAGAGAAGGCTGAAAGAGCTTGTTAAGAAGCACAGCGAGTTCATTTCATTCCCAATCTCGCTCTCAGTAGAGAAGACCCAGGAGACCGAGGTCACTGACGACGAGGCAGAGCTAGACGAGGACAAGAAG---------CCCGAGGAG---GAGAAGCCCAAGGACGATAAGGTGGAGGACGTTACTGACGAGAAAGTGACCGACGTCACTGACGAGGAGGAGAAAAAGGAGGAA---------------------AAGAAAAAGAAGAAGAGGAAGGTCACCAACGTAACGCGTGAGTGGGAAATGCTTAACAAGCAGAAGCCAATTTGGATGAGACTCCCGTCTGAAGTCACCAACGAAGAATATGCAGCGTTCTACAAGAACTTAACCAACGATTGGGAAGACCACTTGGCCGTGAAACACTTCAGCGTTGAGGGTCAGCTTGAGTTCAAAGCTCTACTGTTCGTCCCAAGAAGAGCGCCGTTTGACATGTTCGAGTCCCGCAAAAAGAAAAACAACATCAAGTTGTACGTCAGACGCGTATTTATCATGGACGACTGTGAGGAGCTCATCCCGGAGTGGCTTTCCTTTGTGAAGGGTGTGGTAGACTCAGAGGACCTGCCCTTGAATATTTCTAGGGAAACTCTCCAGCAGAACAAGATCCTCAAGGTCATCAGGAAGAACTTGGTGAAAAAGTGCCTCGAGCTCTTCAATGAACTCACT---GAGAAGAAGGAGGACTTCAAGAAGTTCTACGAGCAGTTCAGCAAGAACCTGAAGCTGGGAATCCACGAGGACAACGCTAATCGCTCAAAGATCGCCGAACTGTTGAGGTTCGAGACAACCAAGAGCGGAGACGAACTCGTGTCACTCAAGGAGTACGTTGACAGGATGAAGAGTGACCAGAAGTATGTGTACTACATCACGGGAGAGTCGAAGCAGAGCGTAGCCTCAAGTCCTTTCCTTGAGACCCTGAGGGCTCGCGACTACGAAGTCCTGTACATGACTGACCCAATTGATGAGTACGCAGTTCAGCAGATCAAGGAGTTTGAAGGCAAGAAACTCAAGTGCTGTACCAAGGAGGGC---CTGGACCTTGATGAGGGCGAGGATGAAAAGAAGTCCTTTGAAGCGCTCAAGGAAGAAATGGAACCTCTTTGCAAGCACATCAAGGAAGTGCTCCACGACAAGGTGGAAAAGGTCGTGTGTGGAACAAGGTTTACCGACTCTCCATGCGCACTTGTCACCAGCGAGTTCGGCTGGAGCGCGAACATGGAGCGTATCATGAAAGCA Toxoplasma_gondii TTCCTTCGCGAGTTGATCTCCAACGCGTCGGACGCTCTGGACAAGATTCGCTATGAGGCCATCACGGACCCCGAGAAGCTCAAGGGC--------------------------------------------------GCAGAGCGCCTGTTCATTCGCATCGTCCCGAACAAGCAGAACAATACGCTGACGATTGAGGACGATGGCATCGGCATGACCAAGGCAGAGCTGGTGAACAACCTCGGTACGATCGCTCGTTCCGGGACGAAGGCCTTCATGGAGGCGCTGCAAGCGGGAGGAGATATCTCCATGATTGGACAGTTCGGTGTGGGTTTCTACTCGGCCTACCTGGTGGCGGACAAGGTGACGGTCGTCTCGCGCCACAACGACGACGAGATGTACGTCTGGGAGTCGAGCGCAGGCGGCTCCTTCACCGTCTCGAAG---GCTGAGGGCCAGTTCGAGAACATCGTTCGCGGAACGCGAATCATCCTCCACATGAAGGAAGACCAGACTGAGTACCTGGAGGACCGCCGCCTGAAGGACCTGGTGAAGAAGCACAGCGAGTTCATCTCGTTCCCCATCGAGCTGGCTGTCGAAAAGAGCGTGGACAAGGAGATCACTGAGTCGGAGGACGAG---GAGAAGCCAGCTGAAGACGCGGAGGAGAAGAAG---GAGGAGGGCGAGGAG------------------------------------------------------GAGAAGAAGGAGGAGGGCGCCGAG------------AAGAAGAAGAAGACCAAGAAGGTCAAGGAAGTCGTGGTCGAGTACGAGCAACTCAACAAACAGAAGCCGCTGTGGATGCGCAAGCCTGAGGACGTGACTTGGGAGGAGTACTGCGCGTTCTACAAGAGTCTGACGAACGACTGGGAGGATCCGCTCGCGGTGAAACATTTCTCGGTGGAGGGGCAACTCGAGTTCAAGGCGCTCCTCTTCCTGCCCAAGCGCGCGCCGTTCGATCTGTTCGAGACCCGCAAGAAGCGCAACAACGTTCGCCTGTACGTCCGCCGCGTCTTCATCATGGACGACTGCGAGGACTTGATCCCCGAGTGGCTGAACTTCGTGCGTGGTGTCGTCGACTCTGAAGATCTCCCGCTGAACATCTCTCGCGAGAGTCTGCAGCAAAACAAGATCCTGAAGGTCATCAAGAAGAACCTCGTGAAGAAGTGCCTCGAAATGTTCCAGGAACTCGAG---GAAAAGAAGGAAGACTACACCAAATTCTACGAGCAGTTCAGCAAGAACCTCAAACTCGGAATCCACGAAGACACCTCCAACCGGAACAAGATCGCCGAGTTGCTGCGCTTCCACACCAGCAAAAGCGGCGACGACGTGGTGTCTCTGAAGGAGTACGTCGACCGGATGAAGGAGAGCCAGAAAGACATTTATTACATCACCGGCGAGTCGCGGCAGTCTGTGGCGTCTTCGCCTTTCCTTGAGGCTCTGCGCAAGAAGGGATACGAAGTCATCTACATGACCGACCCGATCGACGAATACGCCGTCCAGCAGCTCAAGGAGTTCGATGGGAAGAAGCTGCGGTGCTGCACGAAGAAGGGA---TTGGAGCTGGAGGACGACGAGGAGGAGAAGAAGAAGTTCGAGGAGCTGAAGGCGGAGTTCGAGCCGCTCTGCAAGTTGATGAAGGAGGTCCTGCATGACAAGGTCGAGCAGGTAGTGGTGAGCAACAGGATCACGGACTCGCCCTGTGTGTTGGTCACTTCCGAGTACGGCTGGTCTGCGAACATGGAGCGTATTATGAAGGCG ; END; BEGIN MacClade; Version 4.0 86; LastModified -866660528; FileSettings editor '0' '0' '1' '1'; Singles 000; Editor 11011001111111100100010010 '1' '12' Geneva '9' '236' '1' all; EditorPosition '46' '6' '771' '1075'; TreeWindowPosition '46' '6' '799' '1102'; ListWindow Characters closed Geneva '9' '50' '10' '129' '406' 000; ListWindow Taxa closed Geneva '9' '50' '10' '433' '616' 1000000; ListWindow Trees closed Geneva '9' '50' '10' '276' '490'; ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490'; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490'; ListWindow ExSets closed Geneva '9' '50' '10' '276' '490'; ListWindow CharSets closed Geneva '9' '50' '10' '276' '490'; ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490'; ListWindow CharPartitions closed Geneva '9' '50' '10' '276' '490'; ListWindow CharPartNames closed Geneva '9' '50' '10' '276' '490'; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490'; ChartWindowPosition '52' '30' '782' '1092'; StateNamesSymbols closed Geneva '9' '10' '50' '30' '148' '220'; WindowOrder Data; OtherSymbols & / 00 ? -; Correlation '0' '0' '1000' '0' '0' 10011010; Salmo 00000001; EditorFile '4'; ExportHTML _ MOSS '100' 110000; PrettyPrint 10; EditorToolsPosition '701' '43' '115' '165'; TreeWindowProgram 10; TreeWindow 0000; Continuous '0' '3' 1; Calculations 0000001; SummaryMode '0' '0' 0; Charts Geneva '9' ( normal ) 0010; NexusOptions '0' '0' '50' 001011011; TipLabel '1'; TreeFont Geneva '9' ( normal ); TreeShape 1.0 1.0 0100; TraceLabels 0101; ChartColors '0' '0' '65535' '9' '0' 1; ChartBiggestSpot 1; ChartPercent 10; ChartBarWidth '10' 1; ChartVerticalAxis 10101; ChartMinMax '0'; TraceAllChangesDisplay '1' 1; BarsOnBranchesDisplay '0' '0' '60000' '10000' '10000' '10000' '10000' '60000' '65000' '65000' '65000' '6' '1' 0000101; ContinuousBranchLabels 0; AllStatesBranchLabels 1; IndexNotation '2' 1; PrintTree 10.00 '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' Geneva '9' ( normal ) Geneva '10' ( normal ) Geneva '9' ( normal ) Geneva '9' ( normal ) Geneva '9' ( bold ) Geneva '9' ( normal ) Geneva '9' ( normal ) '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '1' '1' '1' '1' '50' '-10901' '-39' '4' '-40' '0' '1' '2' '1' '8' '0' '0' '0' '2' 1000111000000000000100000111000; MatchChar 00 .; EntryInterpretation 01; ColorOptions 00; TreeTools '0' '5' '4' '0' '10' '4' '0' 00100111111101110; EditorTools '0' '0' '0' '1000' '0' '3' '6' '3' '0' 111010101110001; PairAlign '2' '2' '3' '2' '1' '1' '2' '1' '3' 1010; BothTools '1'; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS; TYPESET * UNTITLED = unord: 1 - 1820; EXSET * UNTITLED = 88 - 137 639 - 641 657 - 665 675 - 677 711 - 737 762 - 782 1251 - 1253 1614 - 1616 1632 - 1634; END; BEGIN CODONS; CODONPOSSET * UNTITLED = 1: 1 - 136\3 138 - 1818\3, 2: 2 - 137\3 139 - 1819\3, 3: 3 - 135\3 140 - 1820\3; CODONPOSSET CodonPositions = 1: 1 - 136\3 138 - 1818\3, 2: 2 - 137\3 139 - 1819\3, 3: 3 - 135\3 140 - 1820\3; CODESET * UNTITLED = universal: 1 - 1820; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1820; END; BEGIN TREES; Title 'Trees from "S11_hsp90_gDNA.tree"'; LINK Taxa = Taxa; TRANSLATE 1 Adenoides_eludens, 2 Akashiwo_sanguinea, 3 Alexandrium_fundyense, 4 Alexandrium_minutum, 5 Amphidinium_carterae, 6 Amphidinium_massartii, 7 Amphidinium_mootonorum, 8 Azadinium_spinosum, 9 Eimeria_tenella, 10 Gymnodinium_aureolum, 11 Gymnodinium_fuscum, 12 Heterocapsa_triquetra, 13 Karenia_brevis, 14 Karenia_mikimotoi, 15 Karlodinium_veneficum, 16 Kryptoperidinium_foliaceum, 17 Lepidodinium_chlorophorum, 18 Noctiluca_scintillans, 19 Oxyrrhis_marina, 20 Pentapharsodinium_dalei, 21 Peridinium_willei, 22 Perkinsus_marinus, 23 Polarella_glacialis, 24 Prorocentrum_micans, 25 Prorocentrum_minimum, 26 Protodinium_simplex, 27 Scrippsiella_trochoidea, 28 Spiniferodinium_galeiforme, 29 Thecadinium_kofoidii, 30 Theileria_parva, 31 Toxoplasma_gondii; TREE tree_1 = ((((((((((((13:0.08898980301227588,14:0.14426338597742083):0.2004583253092469,15:0.4660246066625039):0.08167193831351316,7:0.13579239561303025):0.05495307919355907,21:0.2028913935757768):0.008156118052886407,((24:0.2187406602713814,8:0.19955604902167923):0.018241739562922188,25:0.18121461708789344):0.012881090761083458):0.023862864890094926,(((17:0.3796367079987333,26:0.29099379863001884):0.10752802874257394,10:0.084869531595678):0.023000240780136183,11:0.1863127339105367):0.0338428606616894):0.013339918380364413,(((3:0.27533755838372254,4:0.07504740508687746):0.03850530235767624,27:0.16638167071011578):0.015285466281344862,((16:0.2241109182404778,20:0.15934576177775428):0.03893932823545132,12:0.15059445118162085):0.009707245893345817):0.010484809553698904):0.01541037839529169,(((((5:0.17970147243749102,6:0.14003757590655286):0.03516933755658691,28:0.26464654556392764):0.017943301077131935,(18:0.3146032799755446,2:0.26667933078903494):0.08749128457750621):0.027140586613306983,29:0.17756366450573835):0.008739868209323154,1:0.20715740493496693):0.0370650101251806):0.01702592353122534,23:0.09625039181297224):0.05877116285766237,19:0.3779822190119235):0.03857216584202994,22:0.43506631844142085):0.06244053934106359,((9:0.3057164311684216,31:0.3899377440277637):0.0883829509193721,30:0.9705407464218553):0.062440539341063576); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1345538084415; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 8684731892287130241; tell It; setDefaultOrder 0 2 1 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 7158111550406233345; mqVersion 275; checksumv 0 3 226578805 null getNumChars 1820 numChars 1820 getNumTaxa 31 numTaxa 31 short true bits 3458764513820540943 states 15 sumSquaresStatesOnly 932484.0 sumSquares -3.4848205398246557E22 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 135; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 812 598; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #8684731892287130241 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #8684731892287130241; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 677 531; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.sort; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #7158111550406233345 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 253; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 677 531; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.chromaseq.ColorQuality.ColorQuality; tell It; toggleAmbiguities on; toggleMarks on; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; getEmployee #mesquite.chromaseq.SourceFileInfoEditor.SourceFileInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;