#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=42; TAXLABELS Trebouxia_decolorans_RV011A_ex_caloplaca_sp Trebouxia_decolorans_RV002A_ex_caloplaca_orthoclada Trebouxia_decolorans_RV020A_ex_caloplaca_sp Trebouxia_gigantea_RV015A_ex_caloplaca_orthoclada Trebouxia_gigantea_RV025A_ex_caloplaca_orthoclada Trebouxia_gigantea_RV026A_ex_caloplaca_sp Trebouxia_arboricola_RV028A_ex_caloplaca_sp Trebouxia_arboricola_RV041A_ex_caloplaca_orthoclada Trebouxia_arboricola_RV029A_ex_caloplaca_sp Trebouxia_arboricola_RV038A_ex_caloplaca_sp Trebouxia_arboricola_RV013A_ex_caloplaca_sp Trebouxia_arboricola_RV037A_ex_caloplaca_sp Trebouxia_arboricola_RV040A_ex_caloplaca_orthoclada Trebouxia_arboricola_RV001A_ex_caloplaca_orthoclada Trebouxia_arboricola_RV017A_ex_caloplaca_sp Trebouxia_arboricola_RV024A_ex_caloplaca_sp Trebouxia_arboricola_RV014A_ex_caloplaca_orthoclada Trebouxia_arboricola_RV016A_ex_caloplaca_orthoclada Trebouxia_arboricola_RV035A_ex_caloplaca_sp Trebouxia_arboricola_RV019A_ex_caloplaca_sp Trebouxia_arboricola_RV009A_ex_caloplaca_orthoclada Trebouxia_arboricola_RV018A_ex_caloplaca_sp Trebouxia_arboricola_RV005A_ex_caloplaca_orthoclada Trebouxia_arboricola_RV012A_ex_caloplaca_sp Trebouxia_arboricola_RV010A_ex_caloplaca_orthoclada Trebouxia_arboricola_RV008A_ex_caloplaca_orthoclada Trebouxia_arboricola_RV007A_ex_caloplaca_orthoclada Trebouxia_arboricola_RV042A_ex_caloplaca_sp Trebouxia_arboricola_RV033A_ex_caloplaca_sp Trebouxia_arboricola_RV036A_ex_caloplaca_sp Trebouxia_arboricola_RV032A_ex_caloplaca_sp Trebouxia_arboricola_RV034A_ex_caloplaca_sp Trebouxia_arboricola_RV022A_ex_caloplaca_orthoclada Trebouxia_arboricola_RV023A_ex_caloplaca_orthoclada Trebouxia_arboricola_RV003A_ex_caloplaca_orthoclada Trebouxia_arboricola_RV006A_ex_caloplaca_orthoclada Trebouxia_arboricola_RV039A_ex_caloplaca_sp Trebouxia_arboricola_RV021A_ex_caloplaca_sp Trebouxia_arboricola_RV030A_ex_caloplaca_sp Trebouxia_arboricola_RV031A_ex_caloplaca_sp Trebouxia_arboricola_RV027A_ex_caloplaca_sp Trebouxia_arboricola_RV004A_ex_caloplaca_orthoclada ; END; BEGIN CHARACTERS; TITLE Trebouxia_ex_Caloplaca_ITS_Alignment; DIMENSIONS NCHAR=824; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Trebouxia_decolorans_RV011A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAAYRCTGATGCCCTTCTGGAGTAGGCAGGCTGKATTGCYTGCCCTTCAGTTGCGCAGGTCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGACTGGGCGGGTCCAACACCAGTCGGATTCACCTTG-----------------CTA------------TATAGCAAGGGGTTGTGCCGACTGTGAGGGGTGGCGG-TTAACACAC-TTAAGCAATCAATTCTTAAGACAGATCTATTGGTTGGCTTATGCTGGCTATA-GGTTGAAAACCTAAAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTACGTTTCC-----------------------------------------------------------------------TAATGA-------------------TAGGGGACACCGGTTGGATCTGGCCGTCCGGTTTGCTGCTCAAGCTGCCGGTCAGCTGAAATACATTCACACTTTGGGGGCTGCTTTCCTTGAAAGGCTA-CTTTCGAGGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTRCATGCCTTCGTTGCCCGCTAAGTTTCCCAGTAGTCGTTGTGCAGGACGCCCTTTGGCTTTCGACCTGAGGTC Trebouxia_decolorans_RV002A_ex_caloplaca_orthoclada AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAACACTGATGCCCTTCTGGAGTAGGCAGGCTGTATTGCCTGCCCTTCAGTTGCGCAGGTCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGACTGGGCGGGTCCAACACCAGTCGGATTCACCTTG-----------------CTA------------TATAGCAAGGGGTTGTGCCGACTGTGAGGGGTGGCGG-TTAACACAC-TTAAGCAATCAATTCTTAAGACAGATCTATTGGTTGGCTTATGCTGGCTATA-GGTTGAAAACCTAAAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTACGTTTCC-----------------------------------------------------------------------TAATGA-------------------TAGGGGACACCGGTTGGATCTGGCCGTCCGGTTTGCTGTTCAAGCTGCCGGTCAGCTGAAATACATTCACACTCTGGAGACTGCTTTCCTTGAAAGACTA-CTTTCGAGGGGAGGTGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCCCGCTAAGTTTCCCAGTAGTCGTTGTGCAGGACGCCCTTTGGCTTTCGACCTGAGGTC Trebouxia_decolorans_RV020A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAACACTGATGCCCTTCTGGAGTAGGCAGGCTGTATTGCCTGCCCTTCAGTTGCGCAGGTCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGACTGGGCGGGTCCAACACCAGTCGGATTCACCTTG-----------------CTA------------TATAGCAAGGGGTTGTGCCGACTGTGAGGGGTGGCGG-TTAACACAC-TTAAGCAATCAATTCTTAAGACAGATCTATTGGTTGGCTTATGCTGGCTATA-GGTTGAAAACCTAAAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTACGTTTCC-----------------------------------------------------------------------TAATGA-------------------TAGGGGACACCGGTTGGATCTGGCCGTCCGGTTTGCTGTTCAAGCTGCCGGTCAGCTGAAATACATTCACACTCTGGAGACTGCTTTCCTTGAAAGACTA-CTTTCGAGGGGAGGTGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCCCGCTAAGTTTCCCAGTAGTCGTTGTGCAGGACGCCCTTTGGC--TCGACCTGAG-TC Trebouxia_gigantea_RV015A_ex_caloplaca_orthoclada AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACTGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAGACTTGATTGCTTGCTCTTCGGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGACTGGGCGGGTCCAATACCAGCCGGACTCACTTTG-----CCTT--------CTA---------------GGCTTGTGGTTCTGCCGGTTGTGAGGGGTGGCTGTTTAACCCACTTTAAGCAATCAGTTCTGAAGGCAGATCTATTGGCTGGCTT-TGCTGGCTGTA-GACTGATCAATAATAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGAGAGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAAAGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACCAAGTTTCCTACTTTTACTGGGGATGTTTCTTGTTATTATTTGCGGTGTCTCCTATGTCAATAGGAGATGTCCCTTATTTTTATGAGGGATATTACCTGTCCTCGTAGGAAACGCCGGTTGGATCTGGCTGTCCGGATTGCCTTTCAGGTTGCCGGTCAGCTGAAATATATTCACGCTCTGGAGGCAGCTTTC-------------CTTTCGAGGAAAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCGCGCTAGGTTTCCCAGTATGCGTTGTACAGGACGCCTTTTGGC-TTCGACCTGAGGTC Trebouxia_gigantea_RV025A_ex_caloplaca_orthoclada -----------------------------------GCCCACACTGCGAAAATACTTATGCCCTTCTGGAGTAGGCAGACTTTATTGTTTGCTCTTCGGTTGCGCAGGTCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGACTGGGCGGGTCCAATACCAGCCGGACTCACTTTG-----CCTT--------CTA---------------GGCTTGGGGTTCTGCCGGTTGTGAGGGGTGGCTGTTTAACCCACTTTAAGCAATCAGTTCTGAAGGCAGATCTATTGGCTGGCTT-TGCTGGCTGTA-GACTGATCAATAATAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACCAAGTTTCCTATTTTTACTGGGGATGTTTCTTGTTCTTATTTGCGGTGTCTCCTATGTCAATAGGAGATGTCCCTTATTTTTATGAGGGATATTACCTGTCCTTGTAGGAAACGCCGGTTGGATCTGGCTGTCCGGATTGCCTTTCAGGTTGCCGGTCAGCTGAAATATATTCACGCTCTGGAGGCTGCTTTC-------------CTTTCGAGGAAAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCCCGCTAGGTTTCCCAGTATGCGTTGTACAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_gigantea_RV026A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACTGCGAAAATACTTATGCCCTTCTGGAGTAGGCAGACTTTATTGTTTGCTCTTCGGTTGCGCAGGTCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGACTGGGCGGGTCCAATACCAGCCGGACTCACTTTG-----CCTT--------CTA---------------GGCTTGGGGTTCTGCCGGTTGTGAGGGGTGGCTGTTTAACCCACTTTAAGCAATCAGTTCTGAAGGCAGATCTATTGGCTGGCTT-TGCTGGCTGTA-GACTGATCAATAATAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACCAAGTTTCCTATTTTTACTGGGGATGTTTCTTGTTCTTATTTGCGGTGTCTCCTATGTCAATAGGAGATGTCCCTTATTTTTATGAGGGATATTACCTGTCCTTGTAGGAAACGCCGGTTGGATCTGGCTGTCCGGATTGCCTTTCAGGTTGCCGGTCAGCTGAAATATATTCACGCTCTGGAGGCTGCTTTC-------------CTTTCGAGGAAAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCCCGCTAGGTTTCCCAGTATGCGTTGTACAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_arboricola_RV028A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAATTGCTTATGCCCCTCTGGAGTAGGCAAGCTTCACTGCTTGCCCTTCAGTTGCGCAGGTCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATATCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCTTAACAGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTACTGGCTAGCAC-TGCTGGCTGTA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATACCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGGCTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTTCCTTGAAAGGCTACCTTTCAAGGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTTCCCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCAGAGGTC Trebouxia_arboricola_RV041A_ex_caloplaca_orthoclada -------------------------------------?????????????ATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTT-GGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTACCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTCCCTTGGAAGGCTA-TTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTT-CCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAG-TC Trebouxia_arboricola_RV029A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAATTACTTATGCCCTTCTGGAGTAGGCAAGCTTCATTGCTTGCCCTTCAGTTGCGCAGGTCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCTTAACAGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTACTGGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTTGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTTCCTTGAAAGGCCGCCTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTTCCCAGTAGTCGTTGTGCAGGACGCCTTTTGGC-TTCGACCTGAGGTC Trebouxia_arboricola_RV038A_ex_caloplaca_sp AGGAGA-CCTGCGGAAGGATCA-TGAATCTATCGTGCCCACACCGCGAAAATG??TATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTG?CTATA-GAC?GAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATG?AAGAC--------------TAGGG?ATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGATGCTTTCCTTGAAAGGCGA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTTCCCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_arboricola_RV013A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCC-CACCGCGAAAATGCTTATG-CCTTCTGGAGTAAGCAAGGTAAATTGCCTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GGCTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATAGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTTTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGAGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCCCGCTTTGGGGGCTGCTTTCCTTGAAAGGCGA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTTCCCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_arboricola_RV037A_ex_caloplaca_sp --------------------------------------------GCGAAA-TGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAAACTTTGGGGAGGCCTAACGGTCTCAGCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATATAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGGTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTTCCTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTTCCCAGTAGTCGTTGTGCAGGACGCCTTTTGGC-TTCGACCTGAGGTC Trebouxia_arboricola_RV040A_ex_caloplaca_orthoclada AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTT-GGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------CAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTACCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTCCCTTGGAAGGCTA-TTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTT-CCAGTAGTCGTTGTGCAGGACGCCTTTTGG?-???GACC?GAG-TC Trebouxia_arboricola_RV001A_ex_caloplaca_orthoclada AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAACACCAGCCGGATTCCCCTTGAGAGACTTCGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGA-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTGTA-GACTGAACAAAT-CAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTCCCTTGAAAGGCTA-CTTTCAAAGGGAAGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTT-CCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_arboricola_RV017A_ex_caloplaca_sp ACGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTGATTGCTTACCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATAGGACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTTCCTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGTTTCCCAGTAGTCGTTGTGCAGGACGCCTTTTGGC-TTCGACCTGAGGTC Trebouxia_arboricola_RV024A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTGATTGCTTACCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAAATCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATAGGACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTTCTTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGTTTCCCAATAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_arboricola_RV014A_ex_caloplaca_orthoclada AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTGATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAAATCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATAGGACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTTCTTTGAAAGGCTG--TTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCT----------------------------------------------------- Trebouxia_arboricola_RV016A_ex_caloplaca_orthoclada AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTGATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAAATCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATAGGACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTTCTTTGAAAGGCTG--TTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGTTTCCCAATAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_arboricola_RV035A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATCGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGCCAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACGACTCTCAACATCGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGCGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTCCCTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTGGTTGCTCGCTAAGCTT-CCAGTAGTCGTTTTGCAGGACGCCTTTTGGC--TCGACCTGAGGTC Trebouxia_arboricola_RV019A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TCAACTCACTTTAAGCAATCAATTCTGAGGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACTAATACAGACAACTCTCAACAAAGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAATTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTTCCTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTTCCCAGTAGTCGTTGTGCAGGACGCCTTTTGGC-TTCGACCTGAG-TC Trebouxia_arboricola_RV009A_ex_caloplaca_orthoclada AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCG--CTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGGTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTTCCTTGAAAGGCGA-CTTTCAAAGAGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCACGCTAAGCTTCCCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAG-TC Trebouxia_arboricola_RV018A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGACAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TCAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACTAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCAT-GAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTTCCTTGAAAGGCAA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTTCCCAGTAGTCGTTGTGCAGGACGCCTTTTGGC-TTCGACCTGAGGTC Trebouxia_arboricola_RV005A_ex_caloplaca_orthoclada AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTGACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTGGTCTTTCAGCTTGCCGGTCAGTTGAAATACATTCACGCTTTGGGGGCTGCTTCCCTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTT-CCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_arboricola_RV012A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTGACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTGGTCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTCCCTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTT-CCAGTAGTC-TTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_arboricola_RV010A_ex_caloplaca_orthoclada AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTGACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTGGTCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTCCCTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTT-CCAGTAGTC-TTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_arboricola_RV008A_ex_caloplaca_orthoclada AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTGACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGG-ATGCCAGTTGGATATGGCCGTCCGGTTGGTCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTCCCTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTT-CCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_arboricola_RV007A_ex_caloplaca_orthoclada AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTGACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGG-ATGCCAGTTGGATATGGCCGTCCGGTTGGTCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTCCCTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTT-CCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_arboricola_RV042A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------CAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTACCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTCCCTTGAAAGGCTA-TTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTT-CCAGTAGTCGTTGTGCAGGACGCCTTTTGGC-TTCGACCTGAGGTC Trebouxia_arboricola_RV033A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATCGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGCCAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTCCCTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCG?TAAGCTT-CCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_arboricola_RV036A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATCGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGCCAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTCCCTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTT-CCAGTAGTCGTTGTGCAGGACGCCTTTTGGC-TTCGACCTGAGGTC Trebouxia_arboricola_RV032A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATCGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGCCAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTCCCTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTT-CCAGTAGTCGTTGTGCAGGACGCCTTTTGGC-TTCGACCTGAGGTC Trebouxia_arboricola_RV034A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATCGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGCCAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTCCCTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTT-CCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_arboricola_RV022A_ex_caloplaca_orthoclada AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTCCGTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATG?CTTCGTTGCTCGCTAAGCTT-CCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGG?C Trebouxia_arboricola_RV023A_ex_caloplaca_orthoclada AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTCCGTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTT-CCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_arboricola_RV003A_ex_caloplaca_orthoclada AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCCATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATATATTCACGCTTTGGGGGCTGCTTTCCTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCT?GCTAAGCTTCCCAGTAGTCGTTGTGCAGGACGCCTTTTGG?-TTCGACCTGAGGTC Trebouxia_arboricola_RV006A_ex_caloplaca_orthoclada AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCCATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATATATTCACGCTTTGGGGGCTGCTTTCCTTGAAAGGCTA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTC-------------------------------------------------------- Trebouxia_arboricola_RV039A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGACTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGAATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGATGCTTTCCTTGAAAGGCGA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTT?GTTGCTCGCTAAGCTTCCCAGTAGTCGTTGTGCAGGACGCCTTTTGGC-TTCGACCTGAG?TC Trebouxia_arboricola_RV021A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTGTA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTTCTTTGAAAGGCGA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTTCCCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGTTC Trebouxia_arboricola_RV030A_ex_caloplaca_sp -------------GAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGACTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCTAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTTCCTTGAAAGGCGA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTTCCCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_arboricola_RV031A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTTCCYTGAAAGGCKA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTTCCCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGGTC Trebouxia_arboricola_RV027A_ex_caloplaca_sp AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTTAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGATGCTTTCCTTGAAAGGCGA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTTCCCAGTAGTCGTTGTGCAGGACGCCTTTTGGC-TTCGACCTGAGGTC Trebouxia_arboricola_RV004A_ex_caloplaca_orthoclada AGGTGAACCTGCGGAAGGATCATTGAATCTATCGTGCCCACACCGCGAAAATGCTTATGCCCTTCTGGAGTAAGCAAGCTAAATTGCTTGCCCTTCAGTTGCGCAGATCAGGGGCTGGCTCCTTTTGGTGTCAGTTGACTTGATTGGGCGGGTCCAATACCAGCCGGATTCCCCTTGAGAGACTTTGGGGAGGCCTAACGGTCTCACCCAATGGCTTGGGGTTCTGCCGGCTGTGAGGGGTGGCGG-TTAACTCACTTTAAGCAATCAATTCTGAAGACAGATCTATTCGCTAGCAT-TGCTGGCTATA-GACTGAACAAATACAGACAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGCTACTACCCTCAACTAAGTTTCC------------------------------------------------------------------------TATGAAAGAC--------------TAGGGGATGCCAGTTGGATATGGCCGTCCGGTTTGCCTTTCAGCTTGCCGGTCAGCTGAAATACATTCACGCTTTGGGGGCTGCTTTCCTTGAAAGGCGA-CTTTCAAAGGGAGGCGAGTTCCGATTTGGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTTCCCAGTAGTCGTTGTGCAGGACGCCTTTTGGCTTTCGACCTGAGGTC ; END; BEGIN TREES; Title Trebouxia_ex_Caloplaca_ITS_Result; LINK Taxa = Taxa; TRANSLATE 1 Trebouxia_decolorans_RV011A_ex_caloplaca_sp, 2 Trebouxia_decolorans_RV002A_ex_caloplaca_orthoclada, 3 Trebouxia_decolorans_RV020A_ex_caloplaca_sp, 4 Trebouxia_gigantea_RV015A_ex_caloplaca_orthoclada, 5 Trebouxia_gigantea_RV025A_ex_caloplaca_orthoclada, 6 Trebouxia_gigantea_RV026A_ex_caloplaca_sp, 7 Trebouxia_arboricola_RV028A_ex_caloplaca_sp, 8 Trebouxia_arboricola_RV041A_ex_caloplaca_orthoclada, 9 Trebouxia_arboricola_RV029A_ex_caloplaca_sp, 10 Trebouxia_arboricola_RV038A_ex_caloplaca_sp, 11 Trebouxia_arboricola_RV013A_ex_caloplaca_sp, 12 Trebouxia_arboricola_RV037A_ex_caloplaca_sp, 13 Trebouxia_arboricola_RV040A_ex_caloplaca_orthoclada, 14 Trebouxia_arboricola_RV001A_ex_caloplaca_orthoclada, 15 Trebouxia_arboricola_RV017A_ex_caloplaca_sp, 16 Trebouxia_arboricola_RV024A_ex_caloplaca_sp, 17 Trebouxia_arboricola_RV014A_ex_caloplaca_orthoclada, 18 Trebouxia_arboricola_RV016A_ex_caloplaca_orthoclada, 19 Trebouxia_arboricola_RV035A_ex_caloplaca_sp, 20 Trebouxia_arboricola_RV019A_ex_caloplaca_sp, 21 Trebouxia_arboricola_RV009A_ex_caloplaca_orthoclada, 22 Trebouxia_arboricola_RV018A_ex_caloplaca_sp, 23 Trebouxia_arboricola_RV005A_ex_caloplaca_orthoclada, 24 Trebouxia_arboricola_RV012A_ex_caloplaca_sp, 25 Trebouxia_arboricola_RV010A_ex_caloplaca_orthoclada, 26 Trebouxia_arboricola_RV008A_ex_caloplaca_orthoclada, 27 Trebouxia_arboricola_RV007A_ex_caloplaca_orthoclada, 28 Trebouxia_arboricola_RV042A_ex_caloplaca_sp, 29 Trebouxia_arboricola_RV033A_ex_caloplaca_sp, 30 Trebouxia_arboricola_RV036A_ex_caloplaca_sp, 31 Trebouxia_arboricola_RV032A_ex_caloplaca_sp, 32 Trebouxia_arboricola_RV034A_ex_caloplaca_sp, 33 Trebouxia_arboricola_RV022A_ex_caloplaca_orthoclada, 34 Trebouxia_arboricola_RV023A_ex_caloplaca_orthoclada, 35 Trebouxia_arboricola_RV003A_ex_caloplaca_orthoclada, 36 Trebouxia_arboricola_RV006A_ex_caloplaca_orthoclada, 37 Trebouxia_arboricola_RV039A_ex_caloplaca_sp, 38 Trebouxia_arboricola_RV021A_ex_caloplaca_sp, 39 Trebouxia_arboricola_RV030A_ex_caloplaca_sp, 40 Trebouxia_arboricola_RV031A_ex_caloplaca_sp, 41 Trebouxia_arboricola_RV027A_ex_caloplaca_sp, 42 Trebouxia_arboricola_RV004A_ex_caloplaca_orthoclada; TREE 'con_50_majrule' = ((1:0.1458485,(2:0.030327,3:0.026391)1.00:0.0825115):0.5694527500000001,((4:0.290939,(5:0.013625,6:0.013642)0.75:0.054496)1.00:1.098276,((7:0.275768,9:0.130879)0.93:0.156847,(12:0.104381,21:0.130039,38:0.101043,39:0.07418,40:0.025065,(11:0.206791,42:0.026644)0.93:0.050329,(20:0.106414,22:0.073868)0.97:0.076421,(35:0.024258,36:0.026597)1.00:0.076345,(41:0.027676,(10:0.05142,37:0.061354)0.57:0.049756)0.91:0.051774,(15:0.060172,(16:0.0324,(17:0.023436,18:0.024062)0.98:0.069141)1.00:0.128231)0.99:0.092873,(14:0.15518,(33:0.024421,34:0.025257)0.99:0.050841,(8:0.037694,(13:0.031919,28:0.039026)0.55:0.050193)1.00:0.096222,(19:0.155924,29:0.024299,30:0.024984,31:0.026033,32:0.023954)1.00:0.076475,(23:0.046743,24:0.025693,25:0.024503,26:0.025908,27:0.025293)1.00:0.103101)0.88:0.050757)0.77:0.157361)1.00:0.550017)1.00:0.5694527500000001)[% ] [% ] [% setBetweenBits = selected ]; TREE 'con_50_majrule_branchlength' = ((1:0.063337,(2:0.030327,3:0.026391):0.165023):0.528197,((4:0.290939,(5:0.013625,6:0.013642):0.054496):1.098276,((7:0.275768,9:0.130879):0.156847,(12:0.104381,21:0.130039,38:0.101043,39:0.07418,40:0.025065,(11:0.206791,42:0.026644):0.050329,(20:0.106414,22:0.073868):0.076421,(35:0.024258,36:0.026597):0.076345,(41:0.027676,(10:0.05142,37:0.061354):0.049756):0.051774,(15:0.060172,(16:0.0324,(17:0.023436,18:0.024062):0.069141):0.128231):0.092873,(14:0.15518,(33:0.024421,34:0.025257):0.050841,(8:0.037694,(13:0.031919,28:0.039026):0.050193):0.096222,(19:0.155924,29:0.024299,30:0.024984,31:0.026033,32:0.023954):0.076475,(23:0.046743,24:0.025693,25:0.024503,26:0.025908,27:0.025293):0.103101):0.050757):0.157361):0.550017):0.528197)[% ] [% ] [% setBetweenBits = selected ]; END;