#NEXUS [written Thu Jun 07 20:57:16 MDT 2012 by Mesquite version 2.75 (build 564) at notholaena.local/192.168.0.92] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=98; TAXLABELS 244_Halimolobos_jaegeri 245_Boechera_missouriensis 283a_Boechera_missouriensis 095_Boechera_laevigata 284_Boechera_laevigata 094_Boechera_serotina 288_Boechera_canadensis 298_Boechera_canadensis 002a_Boechera_sparsiflora 242_Crucihimalaya_wallichii 249_Transberingia_bursifolia 083_Anelsonia_eurycarpa 098_Anelsonia_eurycarpa 248_Sandbergia_whitedii 084_Nevada_holmgrenii 243_Cusickiella_douglasii 017a_A5_Boechera_platysperma 017a_A7_Boechera_platysperma 017a_AC1_Boechera_platysperma 017a_A2_Boechera_platysperma B103_A2_Boechera_cusickii 023a_A8_Boechera_sparsiflora 023a_A2_Boechera_sparsiflora 089_Phoenicaulis_cheiranthoides 018a_Boechera_puberula 148_Boechera_subpinnatifida 023a_A4_Boechera_sparsiflora 023a_A11_Boechera_sparsiflora 085_A2_Phoenicaulis_cheiranthoides 085_A1_Phoenicaulis_cheiranthoides 085_A5_Phoenicaulis_cheiranthoides 085_A9_Phoenicaulis_cheiranthoides 085_A7_Phoenicaulis_cheiranthoides 085_A3_Phoenicaulis_cheiranthoides 085_A4_Phoenicaulis_cheiranthoides 085_A6_Phoenicaulis_cheiranthoides 023a_A9_Boechera_sparsiflora 023a_A5_Boechera_sparsiflora 023a_A3_Boechera_sparsiflora 023a_A1_Boechera_sparsiflora 017a_A1_Boechera_platysperma 017a_A4_Boechera_platysperma B103_A1_Boechera_cusickii B103_AC1_Boechera_cusickii B103_AC2_Boechera_cusickii B103_A9_Boechera_cusickii 353a_Boechera_constancei 167_Boechera_puberula 370_Cusickiella_douglasii 087_Polyctenium_fremontii 247_Polyctenium_fremontii 308b_Boechera_repanda 357a_Boechera_repanda 086_Boechera_davidsonii 003a_Boechera_crandallii 118a_Boechera_pendulocarpa 306a_Boechera_evadens 007a_Boechera_fernaldiana_subsp._fernaldiana 312a_Boechera_howellii 170_Boechera_retrofracta 120_Boechera_cobrensis 331a_Boechera_pallidifolia 335_Boechera_pallidifolia 069_Boechera_pallidifolia 213_Boechera_lignifera 342a_Boechera_pendulocarpa 028_Boechera_fernaldiana_subsp._vivariensis 192_Boechera_yorkii 041_Boechera_formosa 351a_Boechera_koehleri 004_Boechera_oxylobula 005_Boechera_oxylobula 015_Boechera_pendulina 174_Boechera_gracilipes 347a_Boechera_gracilipes 016_Boechera_perennans 133_Boechera_perennans 322a_Boechera_spatifolia 226b_Boechera_fendleri 229a_Boechera_fendleri 150d_Boechera_texana 168_Boechera_pendulina 124a_Boechera_spatifolia 142_Boechera_lincolnensis 144_Boechera_pulchra 350a_Boechera_breweri_subsp._breweri 022a_Boechera_shockleyi 314a_Boechera_lyallii 027_Boechera_suffrutescens 009a_Boechera_collinsii 359a_Boechera_collinsii 311a_Boechera_rollei 354a_Boechera_arcuata 242_Boechera_lyallii 360a_Boechera_polyantha 367a_Boechera_williamsii 025a_Boechera_stricta 013a_Boechera_nevadensis ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=706; FORMAT DATATYPE = DNA GAP = - MISSING = ?; CHARSTATELABELS 1 adh___0, 2 adh___1, 3 adh___2, 4 adh___3, 5 adh___4, 6 adh___5, 7 adh___6, 8 adh___7, 9 adh___8, 10 adh___9, 11 adh__10, 12 adh__11, 13 adh__12, 14 adh__13, 15 adh__14, 16 adh__15, 17 adh__16, 18 adh__17, 19 adh__18, 20 adh__19, 21 adh__20, 22 adh__21, 23 adh__22, 24 adh__23, 25 adh__24, 26 adh__25, 27 adh__26, 28 adh__27, 29 adh__28, 30 adh__29, 31 adh__30, 32 adh__31, 33 adh__32, 34 adh__33, 35 adh__34, 36 adh__35, 37 adh__36, 38 adh__37, 39 adh__38, 40 adh__39, 41 adh__40, 42 adh__41, 43 adh__42, 44 adh__43, 45 adh__44, 46 adh__45, 47 adh__46, 48 adh__47, 49 adh__48, 50 adh__49, 51 adh__50, 52 adh__51, 53 adh__52, 54 adh__53, 55 adh__54, 56 adh__55, 57 adh__56, 58 adh__57, 59 adh__58, 60 adh__59, 61 adh__60, 62 adh__61, 63 adh__62, 64 adh__63, 65 adh__64, 66 adh__65, 67 adh__66, 68 adh__67, 69 adh__68, 70 adh__69, 71 adh__70, 72 adh__71, 73 adh__72, 74 adh__73, 75 adh__74, 76 adh__75, 77 adh__76, 78 adh__77, 79 adh__78, 80 adh__79, 81 adh__80, 82 adh__81, 83 adh__82, 84 adh__83, 85 adh__84, 86 adh__85, 87 adh__86, 88 adh__87, 89 adh__88, 90 adh__89, 91 adh__90, 92 adh__91, 93 adh__92, 94 adh__93, 95 adh__94, 96 adh__95, 97 adh__96, 98 adh__97, 99 adh__98, 100 adh__99, 101 adh_100, 102 adh_101, 103 adh_102, 104 adh_103, 105 adh_104, 106 adh_105, 107 adh_106, 108 adh_107, 109 adh_108, 110 adh_109, 111 adh_110, 112 adh_111, 113 adh_112, 114 adh_113, 115 adh_114, 116 adh_115, 117 adh_116, 118 adh_117, 119 adh_118, 120 adh_119, 121 adh_120, 122 adh_121, 123 adh_122, 124 adh_123, 125 adh_124, 126 adh_125, 127 adh_126, 128 adh_127, 129 adh_128, 130 adh_129, 131 adh_130, 132 adh_131, 133 adh_132, 134 adh_133, 135 adh_134, 136 adh_135, 137 adh_136, 138 adh_137, 139 adh_138, 140 adh_139, 141 adh_140, 142 adh_141, 143 adh_142, 144 adh_143, 145 adh_144, 146 adh_145, 147 adh_146, 148 adh_147, 149 adh_148, 150 adh_149, 151 adh_150, 152 adh_151, 153 adh_152, 154 adh_153, 155 adh_154, 156 adh_155, 157 adh_156, 158 adh_157, 159 adh_158, 160 adh_159, 161 adh_160, 162 adh_161, 163 adh_162, 164 adh_163, 165 adh_164, 166 adh_165, 167 adh_166, 168 adh_167, 169 adh_168, 170 adh_169, 171 adh_170, 172 adh_171, 173 adh_172, 174 adh_173, 175 adh_174, 176 adh_175, 177 adh_176, 178 adh_177, 179 adh_178, 180 adh_179, 181 adh_180, 182 adh_181, 183 adh_182, 184 adh_183, 185 adh_184, 186 adh_185, 187 adh_186, 188 adh_187, 189 adh_188, 190 adh_189, 191 adh_190, 192 adh_191, 193 adh_192, 194 adh_193, 195 adh_194, 196 adh_195, 197 adh_196, 198 adh_197, 199 adh_198, 200 adh_199, 201 adh_200, 202 adh_201, 203 adh_202, 204 adh_203, 205 adh_204, 206 adh_205, 207 adh_206, 208 adh_207, 209 adh_208, 210 adh_209, 211 adh_210, 212 adh_211, 213 adh_212, 214 adh_213, 215 adh_214, 216 adh_215, 217 adh_216, 218 adh_217, 219 adh_218, 220 adh_219, 221 adh_220, 222 adh_221, 223 adh_222, 224 adh_223, 225 adh_224, 226 adh_225, 227 adh_226, 228 adh_227, 229 adh_228, 230 adh_229, 231 adh_230, 232 adh_231, 233 adh_232, 234 adh_233, 235 adh_234, 236 adh_235, 237 adh_236, 238 adh_237, 239 adh_238, 240 adh_239, 241 adh_240, 242 adh_241, 243 adh_242, 244 adh_243, 245 adh_244, 246 adh_245, 247 adh_246, 248 adh_247, 249 adh_248, 250 adh_249, 251 adh_250, 252 adh_251, 253 adh_252, 254 adh_253, 255 adh_254, 256 adh_255, 257 adh_256, 258 adh_257, 259 adh_258, 260 adh_259, 261 adh_260, 262 adh_261, 263 adh_262, 264 adh_263, 265 adh_264, 266 adh_265, 267 adh_266, 268 adh_267, 269 adh_268, 270 adh_269, 271 adh_270, 272 adh_271, 273 adh_272, 274 adh_273, 275 adh_274, 276 adh_275, 277 adh_276, 278 adh_277, 279 adh_278, 280 adh_279, 281 adh_280, 282 adh_281, 283 adh_282, 284 adh_283, 285 adh_284, 286 adh_285, 287 adh_286, 288 adh_287, 289 adh_288, 290 adh_289, 291 adh_290, 292 adh_291, 293 adh_292, 294 adh_293, 295 adh_294, 296 adh_295, 297 adh_296, 298 adh_297, 299 adh_298, 300 adh_299, 301 adh_300, 302 adh_301, 303 adh_302, 304 adh_303, 305 adh_304, 306 adh_305, 307 adh_306, 308 adh_307, 309 adh_308, 310 adh_309, 311 adh_310, 312 adh_311, 313 adh_312, 314 adh_313, 315 adh_314, 316 adh_315, 317 adh_316, 318 adh_317, 319 adh_318, 320 adh_319, 321 adh_320, 322 adh_321, 323 adh_322, 324 adh_323, 325 adh_324, 326 adh_325, 327 adh_326, 328 adh_327, 329 adh_328, 330 adh_329, 331 adh_330, 332 adh_331, 333 adh_332, 334 adh_333, 335 adh_334, 336 adh_335, 337 adh_336, 338 adh_337, 339 adh_338, 340 adh_339, 341 adh_340, 342 adh_341, 343 adh_342, 344 adh_343, 345 adh_344, 346 adh_345, 347 adh_346, 348 adh_347, 349 adh_348, 350 adh_349, 351 adh_350, 352 adh_351, 353 adh_352, 354 adh_353, 355 adh_354, 356 adh_355, 357 adh_356, 358 adh_357, 359 adh_358, 360 adh_359, 361 adh_360, 362 adh_361, 363 adh_362, 364 adh_363, 365 adh_364, 366 adh_365, 367 adh_366, 368 adh_367, 369 adh_368, 370 adh_369, 371 adh_370, 372 adh_371, 373 adh_372, 374 adh_373, 375 adh_374, 376 adh_375, 377 adh_376, 378 adh_377, 379 adh_378, 380 adh_379, 381 adh_380, 382 adh_381, 383 adh_382, 384 adh_383, 385 adh_384, 386 adh_385, 387 adh_386, 388 adh_387, 389 adh_388, 390 adh_389, 391 adh_390, 392 adh_391, 393 adh_392, 394 adh_393, 395 adh_394, 396 adh_395, 397 adh_396, 398 adh_397, 399 adh_398, 400 adh_399, 401 adh_400, 402 adh_401, 403 adh_402, 404 adh_403, 405 adh_404, 406 adh_405, 407 adh_406, 408 adh_407, 409 adh_408, 410 adh_409, 411 adh_410, 412 adh_411, 413 adh_412, 414 adh_413, 415 adh_414, 416 adh_415, 417 adh_416, 418 adh_417, 419 adh_418, 420 adh_419, 421 adh_420, 422 adh_421, 423 adh_422, 424 adh_423, 425 adh_424, 426 adh_425, 427 adh_426, 428 adh_427, 429 adh_428, 430 adh_429, 431 adh_430, 432 adh_431, 433 adh_432, 434 adh_433, 435 adh_434, 436 adh_435, 437 adh_436, 438 adh_437, 439 adh_438, 440 adh_439, 441 adh_440, 442 adh_441, 443 adh_442, 444 adh_443, 445 adh_444, 446 adh_445, 447 adh_446, 448 adh_447, 449 adh_448, 450 adh_449, 451 adh_450, 452 adh_451, 453 adh_452, 454 adh_453, 455 adh_454, 456 adh_455, 457 adh_456, 458 adh_457, 459 adh_458, 460 adh_459, 461 adh_460, 462 adh_461, 463 adh_462, 464 adh_463, 465 adh_464, 466 adh_465, 467 adh_466, 468 adh_467, 469 adh_468, 470 adh_469, 471 adh_470, 472 adh_471, 473 adh_472, 474 adh_473, 475 adh_474, 476 adh_475, 477 adh_476, 478 adh_477, 479 adh_478, 480 adh_479, 481 adh_480, 482 adh_481, 483 adh_482, 484 adh_483, 485 adh_484, 486 adh_485, 487 adh_486, 488 adh_487, 489 adh_488, 490 adh_489, 491 adh_490, 492 adh_491, 493 adh_492, 494 adh_493, 495 adh_494, 496 adh_495, 497 adh_496, 498 adh_497, 499 adh_498, 500 adh_499, 501 adh_500, 502 adh_501, 503 adh_502, 504 adh_503, 505 adh_504, 506 adh_505, 507 adh_506, 508 adh_507, 509 adh_508, 510 adh_509, 511 adh_510, 512 adh_511, 513 adh_512, 514 adh_513, 515 adh_514, 516 adh_515, 517 adh_516, 518 adh_517, 519 adh_518, 520 adh_519, 521 adh_520, 522 adh_521, 523 adh_522, 524 adh_523, 525 adh_524, 526 adh_525, 527 adh_526, 528 adh_527, 529 adh_528, 530 adh_529, 531 adh_530, 532 adh_531, 533 adh_532, 534 adh_533, 535 adh_534, 536 adh_535, 537 adh_536, 538 adh_537, 539 adh_538, 540 adh_539, 541 adh_540, 542 adh_541, 543 adh_542, 544 adh_543, 545 adh_544, 546 adh_545, 547 adh_546, 548 adh_547, 549 adh_548, 550 adh_549, 551 adh_550, 552 adh_551, 553 adh_552, 554 adh_553, 555 adh_554, 556 adh_555, 557 adh_556, 558 adh_557, 559 adh_558, 560 adh_559, 561 adh_560, 562 adh_561, 563 adh_562, 564 adh_563, 565 adh_564, 566 adh_565, 567 adh_566, 568 adh_567, 569 adh_568, 570 adh_569, 571 adh_570, 572 adh_571, 573 adh_572, 574 adh_573, 575 adh_574, 576 adh_575, 577 adh_576, 578 adh_577, 579 adh_578, 580 adh_579, 581 adh_580, 582 adh_581, 583 adh_582, 584 adh_583, 585 adh_584, 586 adh_585, 587 adh_586, 588 adh_587, 589 adh_588, 590 adh_589, 591 adh_590, 592 adh_591, 593 adh_592, 594 adh_593, 595 adh_594, 596 adh_595, 597 adh_596, 598 adh_597, 599 adh_598, 600 adh_599, 601 adh_600, 602 adh_601, 603 adh_602, 604 adh_603, 605 adh_604, 606 adh_605, 607 adh_606, 608 adh_607, 609 adh_608, 610 adh_609, 611 adh_610, 612 adh_611, 613 adh_612, 614 adh_613, 615 adh_614, 616 adh_615, 617 adh_616, 618 adh_617, 619 adh_618, 620 adh_619, 621 adh_620, 622 adh_621, 623 adh_622, 624 adh_623, 625 adh_624, 626 adh_625, 627 adh_626, 628 adh_627, 629 adh_628, 630 adh_629, 631 adh_630, 632 adh_631, 633 adh_632, 634 adh_633, 635 adh_634, 636 adh_635, 637 adh_636, 638 adh_637, 639 adh_638, 640 adh_639, 641 adh_640, 642 adh_641, 643 adh_642, 644 adh_643, 645 adh_644, 646 adh_645, 647 adh_646, 648 adh_647, 649 adh_648, 650 adh_649, 651 adh_650, 652 adh_651, 653 adh_652, 654 adh_gaps_653, 655 adh_gaps_654, 656 adh_gaps_655, 657 adh_gaps_656, 658 adh_gaps_657, 659 adh_gaps_658, 660 adh_gaps_659, 661 adh_gaps_660, 662 adh_gaps_661, 663 adh_gaps_662, 664 adh_gaps_663, 665 adh_gaps_664, 666 adh_gaps_665, 667 adh_gaps_666, 668 adh_gaps_667, 669 adh_gaps_668, 670 adh_gaps_669, 671 adh_gaps_670, 672 adh_gaps_671, 673 adh_gaps_672, 674 adh_gaps_673, 675 adh_gaps_674, 676 adh_gaps_675, 677 adh_gaps_676, 678 adh_gaps_677, 679 adh_gaps_678, 680 adh_gaps_679, 681 adh_gaps_680, 682 adh_gaps_681, 683 adh_gaps_682, 684 adh_gaps_683, 685 adh_gaps_684, 686 adh_gaps_685, 687 adh_gaps_686, 688 adh_gaps_687, 689 adh_gaps_688, 690 adh_gaps_689, 691 adh_gaps_690, 692 adh_gaps_691, 693 adh_gaps_692, 694 adh_gaps_693, 695 adh_gaps_694, 696 adh_gaps_695, 697 adh_gaps_696, 698 adh_gaps_697, 699 adh_gaps_698, 700 adh_gaps_699, 701 adh_gaps_700, 702 adh_gaps_701, 703 adh_gaps_702, 704 adh_gaps_703, 705 adh_gaps_704, 706 adh_gaps_705 ; MATRIX 244_Halimolobos_jaegeri CTCTGTC-ACACTGATATTTACTTCTGGGAAGCTAAGGTTAATTAC-TTAATT-AATTA--CACC-AAAT---TCATAATCAAGTTCTA--?TTTTTT-ATCACAATTTT-ACAAA-AT-CAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAGA-TCCGAA-TCTTCTTTCTTC---ATATGGTGTT-TTAGTACTTAA--GAGATTT----GAGATTGGTTTGA--TT-GGTTGTG?A-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGATCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCAGTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGGGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCCTTGGGACTTCCACGTTTAGTGAGTACACTGTTGTTCACTCTGGTCAGGTCGCTAAGATCAATCCGGATGCTCCTATTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTcaaaccac?acccaccccacccaccacaaaaaaaac?ac??aac?ccaaaacc 245_Boechera_missouriensis CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCTAAGGTT-------TTAATTAAATTA--AACCCTAAT---TCATGATCAAGTTCTA--ATATTTT-ATCACAGTTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAATACTTT----------------GATTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTGCCAATCTTCACCGGAGAATGTGGAGATTGTCCTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGCCATGATTCACGACGGTCAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCCTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTT?GGAGCCACTTTGAATGTGGCTAAACCTccaa?aac?aaccacccaacccaccacaaaaa??c??????aac?acaaaacc 283a_Boechera_missouriensis CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCTAAGGTT-------TTAATTAAATTA--AACCCTAAT---TCATGATCAAGTTCTA--ATATTTT-ATCACAGTTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAATACTTT----------------GATTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTGCCAATCTTCACCGGAGAATGTGGAGATTGTCCTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGCCATGATTCACGACGGTCAATCTAGATTCTCCATTAATGGCCAACCGATTCATCATTTC?TTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTGGGAGCCACTTTGAATGTGGCTAAACCTccaa?aac?aaccacccaacccaccacaaaaa??c??????aac?acaaaacc 095_Boechera_laevigata CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCTAAGGTT-------TTAATTAAATTA--AACCCTAAT---TCATGATCAAGTTCTA--ATATTTT-ATCACAGTTTT-ACAAA-ATTCAAAGTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA----------------GATTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTGCCAATCTTCACCGGAGAATGTGGAGATTGTCCTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGCCATGATTCACGACGGTCAATCTAGATTCTCCATTAATGGCCAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTGGGAGCCACTTTGAATGTGGCTAAACCTccaa?aac?aaccacccaacccaccacaaaaa??c??????aac?acaaaacc 284_Boechera_laevigata CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCTAAGGTT-------TTAATTAAATTA--AACCCTAAT---TCATGATCAAGTTCTT--ATATTTT-ATCACAATTTT-ACAAA-ATTCAAACTTTCGATG---CCCCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAAGCCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA--------------TAGATTTGTTTTA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCCGTCTTCACCGGAGAATGTGGAGATTGTCCTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGCCATGATTCACGACGGTCAATCTAGATTCTCCATTAATGGCCAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGCATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCTACTTTGAATGTGGCTAAACCTccaa?aac?aaccacccaaccaaccacaaaaa?ca??????aac?acaaaacc 094_Boechera_serotina CTGTGTC-ACACCGATGTTTACTTCTGGGAAGCTAAGGTT---------AATTAAATTA--AACCCAAAT---TCATGATCAAGTTCTT--ATATTTT-ATCACAATTTT-ACAAA-ATTCAAACTTTCGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTT----TAGATTGGTTTGA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTGCCAATCTTCACCGGAGAATGTGGAGATTGTCCTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGCCATGATTCACGACGGTCAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCCTTGGGACCTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCGGATGCTCCTCTTGA-CAAAGTTTGCATCGTC-GGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc?ca?aac?aaccacccaacccaccacaaaaacaa??ac??aac?acaaaacc 288_Boechera_canadensis -----------------------------------------------TTAATT-AATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAGA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACGTAA--GAGATTT----GAGATTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTGCCAATCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGCGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCCTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCGGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT??aa?cac?aaccc?ccaacccaccacaaaaaaaac?ac??aac?acaaaacc 298_Boechera_canadensis CTCTGTC-ACACCGATATTTACTTCTGGGAAGCTAAGGTTAATTAAATTAATT-AATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAGA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACGCAA--GAGATTT----GAGATTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTGCCAATCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGCGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCCTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCGGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTcaaaacac?aaccc?ccaacccaccacaaaaaaaac?ac??aac?acaaaacc 002a_Boechera_sparsiflora CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCTAAGTTT---------AATTAAATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTT----GAGATTGGTTTAA--TTAGGTTGTGCA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCCGTCTTCACGGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGGGATGATTCACGACGGTGGATCTAGATTCTCCATTAATGGTAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAAGTCGCTAAGATCAATCCGGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc?ca?aac?aaccc?ccaacccaccacaaaaacaa??ac??aac?acaaaacc 242_Crucihimalaya_wallichii CTCTGCC-ACACCGATGTTTACTTCTGGGAAGCTAAGGTT---------CATT-TTTTA--CACCCAAAT---TCATAATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAAAATTCAAACTTTTGATGATGCCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCTGAA-TCTTCTTTCTTCTTCATTTGGTGTTATT-GGATTT----GAGATTT----GAGATTGGTTTTA--TTGGATTGTGTAAGGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGATCTTCACTGGAGAATGTGGAGACTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTAAGGATCAACACAGAACGAGGCGGGATGATTCACGACGGTGAATCTAGATTCTCCATTAAAGGCAAACCGATACATCATTTCCTTGGTACTTCCACGTTTAGCGAGTACACTGTGGTTCACTCTGGTCAGGTCGCTAAGATCAATCCGGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCTGTTTTGAATGTGGCTAAACCTc?ca?cac?aaccc?caaaaccacaaacacaa?aa??ac??aac?aaaaaacc 249_Transberingia_bursifolia CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCTAAGGTT---------CATT-AATTA--CACCCAAATAATTCATAATCTAGTTCTA--GTTTTT--ATCACAATTTT-ACAAATATTCAAACTTTTGATGATGCCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTTTTTTTAGTACTTAA--GAG-TTTT---GAGATTGGTTTAA--TTGGATTGTATAAGGATTATTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCCATCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCCGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGGGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCCTTGGGACTTCCACGTTTAGTGAGTACACTGTGGTTCACTCTGGTCAGGTCGCTAAGATCAATCCGGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCGTTTTGAATGTGGCTAAACCTc?ca?cac?aaacc?caaaaccaccaaaaaaaaaac?cac?aac?aaaaaacc 083_Anelsonia_eurycarpa CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCTAAGGTT---------AATTAAATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATATTTT-ATCACAGTTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAATAACTAGAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGGTTTAATTTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGCGACTGATCTTCAACCAGGAGATCATGTTTTACCGATCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGGGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCCTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCC?GATGCTCCTCTTGA-CAAAGT?TGTATCGTC-AGTTGTGGTTTATCC------------------------------------c?ca?aac?aaccacccaacacaccacaaaaacaa??aac?aaaaacaaaacc 098_Anelsonia_eurycarpa CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCTAAGGTT---------AATTAAATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATATTTT-ATCACAGTTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAATAACTAGAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGGTTTAATTTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGCGACTGATCTTCAACCAGGAGATCATGTTTTACCGATCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGGGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCCTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc?ca?aac?aaccacccaacacaccacaaaaacaa??aac?aaaaacaaaacc 248_Sandbergia_whitedii -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT----GAGATTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGT?TTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAG?CG?GATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTAT--------------------------------------???????????????????????????????a?aa???c??aac?acaaaacc 084_Nevada_holmgrenii CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCTAAGGTTAATTAAATTAATT-AATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATTTTTTTATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAATCACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTTTTTAGTACTTA---GAGATTT----GAGATTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCAGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCAC?GGGTTAGGAGCC?CTTTGAATGTGGCTAAACCTcaaaacac?aaccaaccaacccaccaaaaaaacaa??ac??aac?acaaaacc 243_Cusickiella_douglasii CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCTAAGGTT-----------TT-AATTA--CACCCAAAT---TCATGATCAAGTTCTA--ATATTTTTATCACAGTTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAT-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTT-----------T---GAGATTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTCTACCTGTCTTCACAGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACTGAACGAGGCGTGATGATTCACGACGGTCAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?cac?aaccaaccaacccaccacaa??c?aa???ac?aac?acaaaacc 017a_A5_Boechera_platysperma -----------------------------------AGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCATAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGAGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGCTGTT-TTAGCACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGTTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCCTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTCATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT???c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 017a_A7_Boechera_platysperma -----------------------------------AGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCATAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGCTGTT-TTAGCACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGTTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTCATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCCGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT???c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 017a_AC1_Boechera_platysperma -----------------------------------AGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCATAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGCTGTT-TTAGCACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGTTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTCATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT???c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 017a_A2_Boechera_platysperma -----------------------------------AGGTT-----------TTTAATTA--AACCCAAAT---TGATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTTGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCCAA-TCTTCTTTCTTC---ATATGGTGTT-TTAGTACTTAA--GAGATTT----GAGTTTGGTTTAA--TTTGGTTGTGTA-GGGTTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTATGATCTTCTTAGGATCAACACCGAACGAGGCGTCATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTG?GGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT???c?aac?aaccc?ccaacccaccacaaaaaaaac?ac??aac?acaaaacc B103_A2_Boechera_cusickii -----------------------------------AGGTT-----------TTTAATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCAGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTA---------GATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGCGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGATGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT???c?aac?aaccc?ccaacccaccacac?aa?aa??aac?aac?acaaaacc 023a_A8_Boechera_sparsiflora -----------------------------------AGGTT-----------TT--ATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTA---------GATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGTTAAACCT???c??caaaaccc?ccaacccaccacac?aa?aa??aac?aac?acaaaacc 023a_A2_Boechera_sparsiflora -----------------------------------AGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTA---------GATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT???c?caaaaaccc?ccaacccaccacac?aa?aa??aac?aac?acaaaacc 089_Phoenicaulis_cheiranthoides CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTAC-CACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACACTTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAATCACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTT?---GAGATTTTT--GAGATTGGTTTAAA-TTTGGTTGTGTA-GAATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACC?GTCTTCACCGGAGAATGTGGAGATTG?CGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCTATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACCGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCA?TTTGAATGTGGCTAAACCTc??c?caacaaccc?ccaacccaccacaaaaacaa??aaacaaacacaaaacc 018a_Boechera_puberula CTCTGTC-ACACCGATATTTACTTCTGGGAAGCCAAGGTT-----------TT-AATAAC-CACCCAAAT---TCATGATCAAGTTGTA--ATTTTTT-ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCACAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGT------------TGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caacaaccacccaacccaccacaaaaacaa??aac?ca???caaaacc 148_Boechera_subpinnatifida CTCTGTC-ACACCGATATTTACTTCTGGGAAGCCAAGGTT-----------TT-AATAAC-CACCCAAAT---TCATGATCAAGTTGTA--ATTTTTT-ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCACAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGT------------TGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACAGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caacaaccacccaacccaccacaaaaacaa??aac?ca???caaaacc 023a_A4_Boechera_sparsiflora -----------------------------------AGGTT-----------TT--ATAAC-CACCGAAAT---TCATGATCAAGTTGAA--ATTTTTT-ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCACAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGT------------TGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACAGGAGAATGCGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCGCGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTTGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT???c??cacaaccacccaacccaccacaaaaacaa??aac?ca???caaaacc 023a_A11_Boechera_sparsiflora -----------------------------------AGGTT-----------TT-AATTAC-CACCGAAAT---TCATGATCAAGTTGAA--ATTTTTT-ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCACAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGT------------TGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACAGGAGAATGCGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCGCGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTTGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT???c?caacaaccacccaacccaccacaaaaacaa??aac?ca???caaaacc 085_A2_Phoenicaulis_cheiranthoides -----------------------------------AGGTT-----------TT-AATTAC-CACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACACTTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAATCACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTGCTTA---GAGATTTTT--GAGATTGGTTTAAA-TTTGGTTGTGTA-GAATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCTATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACCGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTATGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCATTTTGAATGTGGCTAAACCT???c?caacaaccc?ccaacccaccacaaaaacaa??aaacaaacacaaaacc 085_A1_Phoenicaulis_cheiranthoides -----------------------------------AGGTT-----------TT-AATTAC-CACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACACTTCT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAATCACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTTT--GAGATTGGTTTAAA-TTTGGTTGTGTA-GAATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCTATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACCGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTATGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCATTTTGAATGTGGCTAAACCT???c?caacaaccc?ccaacccaccacaaaaacaa??aaacaaacacaaaacc 085_A5_Phoenicaulis_cheiranthoides -----------------------------------AGGTT-----------TT-AATTAC-CACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACACTTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAATCACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTTT--GAGATTGGTTTAAA-TTTGGTTGTGTA-GAATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCTATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACCGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTATGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCATTTTGAATGTGGCTAAACCT???c?caacaaccc?ccaacccaccacaaaaacaa??aaacaaacacaaaacc 085_A9_Phoenicaulis_cheiranthoides -----------------------------------AGGTT-----------TT-AATTAC-CACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACACTTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAATCACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTTT--GAGATTGGTTTAAA-TTTGGTTGTGTA-GAATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGCCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCTATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACCGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGCTAGGAGCCACTTTGAATGTGGCTAAACCT???c?caacaaccc?ccaacccaccacaaaaacaa??aaacaaacacaaaacc 085_A7_Phoenicaulis_cheiranthoides -----------------------------------AGGTTGATTAAATTAATT-AATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTTGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAAAAGAGATTTT---GAGGTTGGTTTGA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTGCCAATCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGCGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCCTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT?aaaacac?aaccc?ccaacccaccacaaaaaaaaaaaac?aac?acaaaacc 085_A3_Phoenicaulis_cheiranthoides -----------------------------------AGGTTGATTAAATTAATT-AATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTTGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAAAAGAGATTTT---GAGATTGGTTTGA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTGCCAATCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGCGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCTATTCATCATTTCCTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCACTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCATTTTGAATGTGGCTAAACCT?aaaacac?aaccc?ccaacccaccacaaaaaaaaaaaac?aac?acaaaacc 085_A4_Phoenicaulis_cheiranthoides -----------------------------------AGGTTGATTAAATTAATT-AATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTTGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAAAAGAGATTTT---GAGATTGGTTTGA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTGCCAATCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGCGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCCTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT?aaaacac?aaccc?ccaacccaccacaaaaaaaaaaaac?aac?acaaaacc 085_A6_Phoenicaulis_cheiranthoides -----------------------------------AGGTTGATTAAATTAATT-AATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTTGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAAAAGAGATTTT---GAGATTGGTTTGA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTGCCAATCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGCGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCCTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGCTAGGAGCCACTTTGAATGTGGCTAAACCT?aaaacac?aaccc?ccaacccaccacaaaaaaaaaaaac?aac?acaaaacc 023a_A9_Boechera_sparsiflora -----------------------------------AGGTT---------AATTAAATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTAAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCATATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTT----GAGATTGGTTTAA--TTAGGTTGTGCA-GGATTGTTGAGAGTGTCGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCCGTCTTCACGGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGGGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGTAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCGGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT??ca?aac?aaccc?ccaacccaccacaaaaacaa??ac??aac?acaaaacc 023a_A5_Boechera_sparsiflora -----------------------------------AGGTT---------AATTAAATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGATGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTT----GAGATTGGTTTAA--TTAGGTTGTGCA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCCGTCTTCACGGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACACGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGGGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGTAAACCGATTCATCATT------------------------------------------------------------------------------------------------GTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT??ca?aac?aaccc?ccaacccaccacaaaaacaa??ac??aac?acaac??c 023a_A3_Boechera_sparsiflora -----------------------------------AGGTT---------AATTAAATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTAAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCATATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTT----GAGATTGGTTTAA--TTAGGTTGTGCA-GGATTGTTGAGAGTGTCGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCCGTCTTCACGGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGGGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGTAAACCGATTCATCATT------------------------------------------------------------------------------------------------GTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT??ca?aac?aaccc?ccaacccaccacaaaaacaa??ac??aac?acaac??c 023a_A1_Boechera_sparsiflora -----------------------------------AGGTT---------AATTAAATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCACAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGATGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTAGAT--------TTT----GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCCGTCTTCACGGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGGGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGTAAACCGATTCATCATT------------------------------------------------------------------------------------------------GTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT??ca?aac?aaccc?ccaacccaccacaa?ca?aa???c??aac?acaac??c 017a_A1_Boechera_platysperma -----------------------------------AGGTT-----------TTGAATTA--AACCCAAAT---TGATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTTGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCC-AA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAA--GAGATTT----GAGTTTGGTTTAA--TTTGGTTGTGTA-GGGTTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCCGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCAAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGGGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCACTAAGATCAATCCGGATGCTCC--------------------GTC-AGATGTGGTTTATCCACTGGGTTAGGAGCCATTTTGAATGTGGCTAAACCT???c?aac?aaccc?ccaaccccccacaaaaaaaac?ac??aac?acaaac?c 017a_A4_Boechera_platysperma -----------------------------------AGGTT-----------TTTAATTA--AACCCAAAT---TGATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTTGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCCAA-TCTTCTTTCTTC---ATATGGTGTT-TTAGTACTTAA--GAGATTT----GAGTTTGGTTTAA--TTTGGTTGTGTA-GGGTTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCCGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCAAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGG---------------TGAATCTAGATTTTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCACTAAGATCAATCCGGATGCTCC--------------------GTC-AGATGTGGTTTATCCACTGGGTTAGGAGCCATTTTGAATGTGGCTAAACCT???c?aac?aaccc?ccaacccaccacaaaaaaaac?ac??aac?acacac?c B103_A1_Boechera_cusickii -----------------------------------AGGTT-----------TTTAATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGGTG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCAGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCCAA-TCTTCTTTCTTC---ATTTGGTGTT-TCAGTACTTTAA-GAGATTT----GAGTTTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGAC-----TTCAACCAGGAGATCATGTTTTGCCCGTCTTCACCGGAGAATGTGGAGATTGTTGTCACTGTCACTAAGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGGGATGATTCACGACGGTGAATCTAGATTCCCCATTAATGCCAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCGGATGCTCCTCTTGG-CAAAGTTTGTATTGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTAAATGTGGCTAAACCT???c?aac?aaccc?ccaacccaccacaaaaaaaaacac??aac?accaaacc B103_AC1_Boechera_cusickii -----------------------------------AGGTT-----------TTTAATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCAGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCCAA-TCTTCTTTCTTC---ATTTGGTGTT-TCAGTACTTTAA-GAGATTT----GAGTTTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGAC-----TTCAACCAGGAGATCATGTTTTGCCCGTCTTCACCGGAGAATGTGGAGATTGTTGTCACTGTCACTAAGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGGGATGATTCACGACGGTGAATCTAGATTCCCCATTAATGCCAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCGGATGCTCCTCTTGG-CAAAGTTTGTATTGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTAAATGTGGCTAAACCT???c?aac?aaccc?ccaacccaccacaaaaaaaaacac??aac?accaaacc B103_AC2_Boechera_cusickii -----------------------------------AGGTT-----------TT-TATTA--AACCCAAAT---TCATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCAGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCCAA-TCTTCTTTCTTC---ATTTGGTGTT-TCAGTACTTTAA-GAGATTT----GAGTTTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGAC-----TTCAACCAGGAGATCATGTTTTGCCCGTCTTCACCGGAGAATGTGGAGATTGTTGTCACTGTCACTAAGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGGGATGATTCACGACGGTGAATCTAGATTCCCCATTAATGCCAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCGGATGCTCCTCTTGG-CAAAGTTTGTATTGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTAAATGTGGCTAAACCT???c?cac?aaccc?ccaacccaccacaaaaaaaaacac??aac?accaaacc B103_A9_Boechera_cusickii -----------------------------------AGGTT-----------TT-AATAAC-CACCCAAAT---TCATGATCAAGTTCTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCAGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCCAA-TCTTCTTTCTTC---ATTTGGTGTT-TCAGTACTTTAA-GAGATTT----GAGTTTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGAC-----TTCAACCAGGAGATCATGTTTTGCCCGTCTTCACCGGAGAATGTGGAGATTGTTGTCACTGTCACTAAGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGGGATGATTCACGACGGTGAATCTAGATTCCCCATTAATGCCAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT???c?caacaaccc?ccaacccaccacaaaaaaaaacac??aac?accaaacc 353a_Boechera_constancei CTCTGTC-ACACCGATATTTACTTCTGGGAAGCCAAGGTT-----------TT-AATAAC-CACCCAAAT---TCATGATCAAGTTGTA--ATTTTTT-ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCACAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTT------------GTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caacaaccacccaacccaccacaaaaacaa??aac?ac???caaaacc 167_Boechera_puberula CTCTGTC-ACACCGATATTTACTTCTGGGAAGCCAAGGTT-----------TT-AATAAC-CACCCAAAT---TCATGATCAAGTTGTA--ATTTTTT-ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCACAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTT------------GTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caacaaccacccaacccaccacaaaaacaa??aac?ac???caaaacc 370_Cusickiella_douglasii ATCTGTC-ACACCGATGTTTACTTCTGGGAAGCTAAGGTT-----------TT-AATTA--CACCCAAAT---TCATGATCAAGTTCTA--ATWTTTTTATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAT-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTT-----------T---GAGATTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGWCTGATCTTCAACCAGGAGATCATGTTCTACCTGTCTTCACAGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACTGAACGAGGCGTGATGATTCACGACGGTCAATCTAGATTCTCCATTAATGGCAAACCRATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?cac?aaccaaccaacccaccacaa??c?aa???ac?aac?acaaaacc 087_Polyctenium_fremontii ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAT?TT---GAGA?TGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCCGTCTTCACCGGAGAATGTGGAGATTGTC?TCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCG?GATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGCCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGT?TAT--------------------------------------??????????????????????????????aa?aa??aac?aac?acaaaacc 247_Polyctenium_fremontii ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATATT---GAGA?TGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCCGTCTTCACCGGAGAATGTGGAGATTGTC?TCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGGGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGG?CAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGT?TAT--------------------------------------??????????????????????????????aa?aa??aac?aac?acaaaacc 308b_Boechera_repanda CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCTAAGGTTGATTAAATTAATT-AATTA--AACCCAAAT---TTATGATCAAGTTCTA--ATTTTT--ATAACAATGTT-ACAAA-ATTCAAATTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAAATCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATGATATTGAGATTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCCGTCTTCACCGGAGAATGTGGAGATTGTCCACACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACTTcaaaacac?aaccc?ccaacccaacacaaaaacaa??aaaaaac?acaaaacc 357a_Boechera_repanda CTCTGCC-ACACCGATGTTTACTTCTGGGAAGCTAAGGTTGATTAAATTAATT-AATTA--AACCCAAAT---TTATGATCAAGTTCTA--ATTTTT--ATAACAATGTT-ACAAA-ATTCAAATTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAAATCTTCTTTCTTC---ATTTGGT-TT-TTAGTACTTA---GAGATGATATTGAGATTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCCGTCTTCACCGGAGAATGTGGAGATTGTCCACACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTcaaaacac?aaccc?ccaacccaacccaaaaacaa??aaaaaac?acaaaacc 086_Boechera_davidsonii --------------------------------------------------------------------------------------------TTTTT--ATCA?AATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAATCACCGTTGTTTCCTCGTATATTCGGCCATGAAGCTGGAGGGTAATAA---CTATTAA-CCAGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGTTGTGTA-G?ATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATA?ATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTAT--------------------------------------?????????????c?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 003a_Boechera_crandallii --------------------------------------------------------------------------------------------TTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCACAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGAT?TT---GAGATTGGTT------------GTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAAATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCC??ATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTAT--------------------------------------?????????????c?ccaacccaccacaaaaacaa??aac?ac???caaaacc 118a_Boechera_pendulocarpa --------------------------------------------------------------------------------------------TTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CC?CAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCC?AA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGCACT?A---GAGATTTT---GAGATTGGTT------------GAGTT-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTCCAGTTGTGGTTTAT--------------------------------------?????????????c?ccaacccaccacaaaaacaa??aac?ac???caaaaca 306a_Boechera_evadens CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTTT-ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccacccaacccaccacaaaaacaa??aac?aac?acaaaacc 007a_Boechera_fernaldiana_subsp._fernaldiana CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 312a_Boechera_howellii CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCCAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTAACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 170_Boechera_retrofracta CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CTCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAA--GAGATTTT---GAGATTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaaaaac?aac?aac?acaaaacc 120_Boechera_cobrensis CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGTTGTGTA-GGATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACGTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 331a_Boechera_pallidifolia CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCATC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGCTATGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 335_Boechera_pallidifolia ---------------------------------------T-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTT-GATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCWTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGCTATGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGG-------------------------------???c?caaaaaccc?ccaccccaccacaaaaacaa??aac?aac?acaaaacc 069_Boechera_pallidifolia CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCATC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGCTATGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 213_Boechera_lignifera CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCATC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGCTATGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 342a_Boechera_pendulocarpa CTCTGTC-ACACCGATRTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATWACACACCCAATT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCRCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATRA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGCACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCTAGATTCTCCATTAATGGCAAACCGATATATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCYCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 028_Boechera_fernaldiana_subsp._vivariensis --------------------------------------TT-----------TT-AATTGCACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---????TTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTTTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGGTTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTAT--------------------------------------???c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 192_Boechera_yorkii CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTGCACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCATACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 041_Boechera_formosa CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCATACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 351a_Boechera_koehleri CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAA--GAGGTTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaaaaac?aac?aac?acaaaacc 004_Boechera_oxylobula CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGATGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCCTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 005_Boechera_oxylobula CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGATGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCCTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 015_Boechera_pendulina CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGCGGTTTCCTCGCATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAA--GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCCTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaaaaac?aac?aac?acaaaacc 174_Boechera_gracilipes CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGCGGTTTCCTCGCATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAA--GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCCTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaaaaac?aac?aac?acaaaacc 347a_Boechera_gracilipes CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGCGGTTTCCTCGCATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAA--GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCCTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaaaaac?aac?aac?acaaaacc 016_Boechera_perennans CTCTGCC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGCGGTTTCCTCGCATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAA--GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCCTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaaaaac?aac?aac?acaaaacc 133_Boechera_perennans CTCTGCC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGCGGTTTCCTCGCATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAA--GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCCTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaaaaac?aac?aac?acaaaacc 322a_Boechera_spatifolia ----------------------------GAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGCGGTTTCCTCGCATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAA--GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT???c?caaaaaccc?ccaacccaccacaaaaaaaac?aac?aac?acaaaacc 226b_Boechera_fendleri CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAACTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGCGGTTTCCTCGCATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAA--GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaaaaac?aac?aac?acaaaacc 229a_Boechera_fendleri CTCTGTCCACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGACCAAGTTGTA--ATTTTT--ATCACAACTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGCGGTTTCCTCGCATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAA--GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTa??c?caaaaaccc?ccaacccaccacaaaaaaaac?aac?aac?acaaaacc 150d_Boechera_texana CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGCGGTTTCCTCGCATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAA--GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaaaaac?aac?aac?acaaaacc 168_Boechera_pendulina CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCCCAGGGACAAACACCGCGGTTTCCTCGCATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCAAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAA--GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTT-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaaaaac?aac?aac?acaaaacc 124a_Boechera_spatifolia CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AAT?ACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTTTACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCG??GTTTCCTCGCATCTT?GGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTAA--GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTA?GAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?acaacccaccacaaaaaaaac?aac?aac?acaaaacc 142_Boechera_lincolnensis CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTATAATTTTTT-ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---ATAAAAA-CCCGAA-TATTCTTTCTTC---ATTTGGTGTT-TTAGTACTTG---GGGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGCGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaacaacccaacccaccacaaaaacaa??aac?aac?acaaaacc 144_Boechera_pulchra CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTATAATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---ATAAAAA-CCCGAA-TATTCTTTCTTC---ATTTGGTGTT-TTAGTACTTG---GGGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGCGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaacac?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 350a_Boechera_breweri_subsp._breweri -------------------------------------GTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGKTGTT-TTAGTA---------GATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACT---------------------------------???c?caaaaaccc?ccaacccaccacac?aa?aa??aac?aac?acaaaacc 022a_Boechera_shockleyi CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTTAAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 314a_Boechera_lyallii CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGCACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCCGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 027_Boechera_suffrutescens CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGCACTTA---AAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGTTGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCTCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 009a_Boechera_collinsii CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGCACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAGGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 359a_Boechera_collinsii CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGCACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACTTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAGGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 311a_Boechera_rollei CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTACCACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 354a_Boechera_arcuata CTCTGTC-ACACCGATGTTTACTTCTGGGAAGCCAAGGTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGTACTTA---GAGATTTT---GAGATTGGTTTAA--TTTGGCTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCCTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCATGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATTCATCATTTCGTTGGGACTTCCACGTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCTc??c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 242_Boechera_lyallii -------------------------------------GTT-----------TT-AATTACACACCCAAAT---TCATGATCAAGTTGTA--ATTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CC?CAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGCACTTA---GAGATTTT---GAGATTGGTTGAG--TTTGGYTGTGTA-GTATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCRTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACRCCGAACGAGGCGTGATGATTCAYGACGGTGAATCYAGATTCTCCATTAATGGCAAACCGATWYATCATTTCGTTGGGACTTCCACKTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCYCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGT-----------------------------???c?caaaaaccc?ccaacccaccacaaaaacaa??aac?aac?acaaaacc 360a_Boechera_polyantha -------------------------------------GTT-----------TT-AAT?ACAC-ACCAAAT---TCATGATCAAGTTG??--ATTTTTT-ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCRCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGYACTTA---GAGATTTT---GAGATTGGTTKAR--TTTGGYTGTGTA-G?ATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGG?GATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAAYACCGAACGAGGCGTGATGATTCAYGACGGTGAATCYAGATTCTCCATTAATGGCAAACCGATWYATCATTTCGTTGGGACTTCCACKTTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTKATGCTCCYCTTGA-CAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACTGGGTTAGGAGCCACTTTGAATGTGGCTAAACCT???c?caaacaccacccaacccaccacaaaaacaa??aac?aac?acaaaacc 367a_Boechera_williamsii -------------------------------------GTT-----------TT-AAT?ACCA-CCCAAAT---TCATGATCAAGTTGTA--ATTTTTT-ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCRCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAGCACTTA---GAGATTTT---GAGATTGGTTKAR--TTTGGYTGTGTA-G?ATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGYCTTCACCGGAGAATGTGGWGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCAYGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGATWYATCATTTCGTTGGGACTTCCACKTTTAGTGAGTACACTGTCGTTCAMTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCYCTTGA-MAAAGTTTGTATCGTC-AGTTGTGGTTTATCCACT---------------------------------???c?caaacaccacccaacccaccacaaaaacaa??aac?aac?acaaaacc 025a_Boechera_stricta --------------------------------------------------------------------------------------------TTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CCGCAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAA?-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAG?ACTTA---GAGATTTT---GAGATTGGTT?A?--TAAGG?TGTGTA-G?ATTGTTGAGAGTGTTGGAGAAGGAGTGACTGAT?TTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGAGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCACGACGGTGAATCCAGATTCTCCATTAATGGCAAACCGAT??ATCATTTCGTTGGGACTTCCAC?TTTAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCTGATGCTCCCCTTGATCAAAGTTTGTATCGTC-AGTTGTGGTTTAT--------------------------------------?????????????c?ccaacccaccacaaaaacaa??aac?aac?acaaaaac 013a_Boechera_nevadensis --------------------------------------------------------------------------------------------TTTTT--ATCACAATTTT-ACAAA-ATTCAAACTTTTGATG---CC?CAGGGACAAACACCGTTGTTTCCTCGTATCTTCGGCCATGAAGCTGGAGGGTAATAA---CTAAAAA-CCCGAA-TCTTCTTTCTTC---ATTTGGTGTT-TTAG?ACTTA---GAGATTTT---GAGATTGGTT???--T??GGTTGTGTA-G?ATTGTTGAGAGTGTTGGAGAAGGAGTGACTGATCTTCAACCAGGAGATCATGTTTTACCGGTCTTCACCGGAGAATGTGGTGATTGTCGTCACTGTCACTCGGAGGAATCCAACATGTGTGATCTTCTCAGGATCAACACCGAACGAGGCGTGATGATTCA?GACGGTGAATC?AGATTCTCCATTAATGGCAAACCGAT??ATCATTTCGTTGGGACTTCCAC?T?TAGTGAGTACACTGTCGTTCACTCTGGTCAGGTCGCTAAGATCAATCCT-----------------------------------------------------------------------------------?????????????c?ccaacccaccacaaaaacaa??aac?aac?acaaa??? ; OPTIONS MSTAXA = POLYMORPH; STATELABELS 1 , 2 , 3 , 4 , 5 , 6 , 7 , 8 , 9 , 10 , 11 , 12 , 13 , 14 , 15 , 16 , 17 , 18 , 19 , 20 , 21 , 22 , 23 , 24 , 25 , 26 , 27 , 28 , 29 , 30 , 31 , 32 , 33 , 34 , 35 , 36 , 37 , 38 , 39 , 40 , 41 , 42 , 43 , 44 , 45 , 46 , 47 , 48 , 49 , 50 , 51 , 52 , 53 , 54 , 55 , 56 , 57 , 58 , 59 , 60 , 61 , 62 , 63 , 64 , 65 , 66 , 67 , 68 , 69 , 70 , 71 , 72 , 73 , 74 , 75 , 76 , 77 , 78 , 79 , 80 , 81 , 82 , 83 , 84 , 85 , 86 , 87 , 88 , 89 , 90 , 91 , 92 , 93 , 94 , 95 , 96 , 97 , 98 , 99 , 100 , 101 , 102 , 103 , 104 , 105 , 106 , 107 , 108 , 109 , 110 , 111 , 112 , 113 , 114 , 115 , 116 , 117 , 118 , 119 , 120 , 121 , 122 , 123 , 124 , 125 , 126 , 127 , 128 , 129 , 130 , 131 , 132 , 133 , 134 , 135 , 136 , 137 , 138 , 139 , 140 , 141 , 142 , 143 , 144 , 145 , 146 , 147 , 148 , 149 , 150 , 151 , 152 , 153 , 154 , 155 , 156 , 157 , 158 , 159 , 160 , 161 , 162 , 163 , 164 , 165 , 166 , 167 , 168 , 169 , 170 , 171 , 172 , 173 , 174 , 175 , 176 , 177 , 178 , 179 , 180 , 181 , 182 , 183 , 184 , 185 , 186 , 187 , 188 , 189 , 190 , 191 , 192 , 193 , 194 , 195 , 196 , 197 , 198 , 199 , 200 , 201 , 202 , 203 , 204 , 205 , 206 , 207 , 208 , 209 , 210 , 211 , 212 , 213 , 214 , 215 , 216 , 217 , 218 , 219 , 220 , 221 , 222 , 223 , 224 , 225 , 226 , 227 , 228 , 229 , 230 , 231 , 232 , 233 , 234 , 235 , 236 , 237 , 238 , 239 , 240 , 241 , 242 , 243 , 244 , 245 , 246 , 247 , 248 , 249 , 250 , 251 , 252 , 253 , 254 , 255 , 256 , 257 , 258 , 259 , 260 , 261 , 262 , 263 , 264 , 265 , 266 , 267 , 268 , 269 , 270 , 271 , 272 , 273 , 274 , 275 , 276 , 277 , 278 , 279 , 280 , 281 , 282 , 283 , 284 , 285 , 286 , 287 , 288 , 289 , 290 , 291 , 292 , 293 , 294 , 295 , 296 , 297 , 298 , 299 , 300 , 301 , 302 , 303 , 304 , 305 , 306 , 307 , 308 , 309 , 310 , 311 , 312 , 313 , 314 , 315 , 316 , 317 , 318 , 319 , 320 , 321 , 322 , 323 , 324 , 325 , 326 , 327 , 328 , 329 , 330 , 331 , 332 , 333 , 334 , 335 , 336 , 337 , 338 , 339 , 340 , 341 , 342 , 343 , 344 , 345 , 346 , 347 , 348 , 349 , 350 , 351 , 352 , 353 , 354 , 355 , 356 , 357 , 358 , 359 , 360 , 361 , 362 , 363 , 364 , 365 , 366 , 367 , 368 , 369 , 370 , 371 , 372 , 373 , 374 , 375 , 376 , 377 , 378 , 379 , 380 , 381 , 382 , 383 , 384 , 385 , 386 , 387 , 388 , 389 , 390 , 391 , 392 , 393 , 394 , 395 , 396 , 397 , 398 , 399 , 400 , 401 , 402 , 403 , 404 , 405 , 406 , 407 , 408 , 409 , 410 , 411 , 412 , 413 , 414 , 415 , 416 , 417 , 418 , 419 , 420 , 421 , 422 , 423 , 424 , 425 , 426 , 427 , 428 , 429 , 430 , 431 , 432 , 433 , 434 , 435 , 436 , 437 , 438 , 439 , 440 , 441 , 442 , 443 , 444 , 445 , 446 , 447 , 448 , 449 , 450 , 451 , 452 , 453 , 454 , 455 , 456 , 457 , 458 , 459 , 460 , 461 , 462 , 463 , 464 , 465 , 466 , 467 , 468 , 469 , 470 , 471 , 472 , 473 , 474 , 475 , 476 , 477 , 478 , 479 , 480 , 481 , 482 , 483 , 484 , 485 , 486 , 487 , 488 , 489 , 490 , 491 , 492 , 493 , 494 , 495 , 496 , 497 , 498 , 499 , 500 , 501 , 502 , 503 , 504 , 505 , 506 , 507 , 508 , 509 , 510 , 511 , 512 , 513 , 514 , 515 , 516 , 517 , 518 , 519 , 520 , 521 , 522 , 523 , 524 , 525 , 526 , 527 , 528 , 529 , 530 , 531 , 532 , 533 , 534 , 535 , 536 , 537 , 538 , 539 , 540 , 541 , 542 , 543 , 544 , 545 , 546 , 547 , 548 , 549 , 550 , 551 , 552 , 553 , 554 , 555 , 556 , 557 , 558 , 559 , 560 , 561 , 562 , 563 , 564 , 565 , 566 , 567 , 568 , 569 , 570 , 571 , 572 , 573 , 574 , 575 , 576 , 577 , 578 , 579 , 580 , 581 , 582 , 583 , 584 , 585 , 586 , 587 , 588 , 589 , 590 , 591 , 592 , 593 , 594 , 595 , 596 , 597 , 598 , 599 , 600 , 601 , 602 , 603 , 604 , 605 , 606 , 607 , 608 , 609 , 610 , 611 , 612 , 613 , 614 , 615 , 616 , 617 , 618 , 619 , 620 , 621 , 622 , 623 , 624 , 625 , 626 , 627 , 628 , 629 , 630 , 631 , 632 , 633 , 634 , 635 , 636 , 637 , 638 , 639 , 640 , 641 , 642 , 643 , 644 , 645 , 646 , 647 , 648 , 649 , 650 , 651 , 652 , 653 , 654 655 indel2_41_47 656 indel3_41_49 657 indel4_41_51 658 indel5_47_47 659 indel6_54_54 , 655 , 656 , 657 , 658 , 659 , 660 661 indel8_60_61 662 indel9_61_61 663 indel10_63_63 664 indel11_66_66 665 indel12_71_73 , 661 , 662 , 663 , 664 , 665 , 666 667 indel14_98_99 668 indel15_99_99 669 indel16_111_111 670 indel17_117_117 671 indel18_120_120 , 667 , 668 , 669 , 670 , 671 , 672 673 indel20_134_136 674 indel21_197_199 675 indel22_207_207 676 indel23_211_211 677 indel24_214_214 , 673 , 674 , 675 , 676 , 677 , 678 679 indel26_237_237 680 indel27_240_240 681 indel28_243_243 682 indel29_247_255 683 indel30_250_253 , 679 , 680 , 681 , 682 , 683 , 684 685 indel32_250_260 686 indel33_251_253 687 indel34_251_264 688 indel35_251_266 689 indel36_252_253 , 685 , 686 , 687 , 688 , 689 , 690 691 indel38_257_257 692 indel39_261_264 693 indel40_262_264 694 indel41_263_264 695 indel42_274_285 , 691 , 692 , 693 , 694 , 695 , 696 697 indel44_278_279 698 indel45_279_279 699 indel46_282_282 700 indel47_292_292 701 indel48_324_328 , 697 , 698 , 699 , 700 , 701 , 702 703 indel50_503_598 704 indel51_579_598 705 indel52_585_585 706 indel53_602_602 , 703 , 704 , 705 , 706 ,; END; BEGIN TREES; Title 'Trees from "Boechera_adh_treebase.nex"'; LINK Taxa = Taxa; TRANSLATE 1 244_Halimolobos_jaegeri, 2 245_Boechera_missouriensis, 3 283a_Boechera_missouriensis, 4 095_Boechera_laevigata, 5 284_Boechera_laevigata, 6 094_Boechera_serotina, 7 288_Boechera_canadensis, 8 298_Boechera_canadensis, 9 002a_Boechera_sparsiflora, 10 242_Crucihimalaya_wallichii, 11 249_Transberingia_bursifolia, 12 083_Anelsonia_eurycarpa, 13 098_Anelsonia_eurycarpa, 14 248_Sandbergia_whitedii, 15 084_Nevada_holmgrenii, 16 243_Cusickiella_douglasii, 17 017a_A5_Boechera_platysperma, 18 017a_A7_Boechera_platysperma, 19 017a_AC1_Boechera_platysperma, 20 017a_A2_Boechera_platysperma, 21 B103_A2_Boechera_cusickii, 22 023a_A8_Boechera_sparsiflora, 23 023a_A2_Boechera_sparsiflora, 24 089_Phoenicaulis_cheiranthoides, 25 018a_Boechera_puberula, 26 148_Boechera_subpinnatifida, 27 023a_A4_Boechera_sparsiflora, 28 023a_A11_Boechera_sparsiflora, 29 085_A2_Phoenicaulis_cheiranthoides, 30 085_A1_Phoenicaulis_cheiranthoides, 31 085_A5_Phoenicaulis_cheiranthoides, 32 085_A9_Phoenicaulis_cheiranthoides, 33 085_A7_Phoenicaulis_cheiranthoides, 34 085_A3_Phoenicaulis_cheiranthoides, 35 085_A4_Phoenicaulis_cheiranthoides, 36 085_A6_Phoenicaulis_cheiranthoides, 37 023a_A9_Boechera_sparsiflora, 38 023a_A5_Boechera_sparsiflora, 39 023a_A3_Boechera_sparsiflora, 40 023a_A1_Boechera_sparsiflora, 41 017a_A1_Boechera_platysperma, 42 017a_A4_Boechera_platysperma, 43 B103_A1_Boechera_cusickii, 44 B103_AC1_Boechera_cusickii, 45 B103_AC2_Boechera_cusickii, 46 B103_A9_Boechera_cusickii, 47 353a_Boechera_constancei, 48 167_Boechera_puberula, 49 370_Cusickiella_douglasii, 50 087_Polyctenium_fremontii, 51 247_Polyctenium_fremontii, 52 308b_Boechera_repanda, 53 357a_Boechera_repanda, 54 086_Boechera_davidsonii, 55 003a_Boechera_crandallii, 56 118a_Boechera_pendulocarpa, 57 306a_Boechera_evadens, 58 007a_Boechera_fernaldiana_subsp._fernaldiana, 59 312a_Boechera_howellii, 60 170_Boechera_retrofracta, 61 120_Boechera_cobrensis, 62 331a_Boechera_pallidifolia, 63 335_Boechera_pallidifolia, 64 069_Boechera_pallidifolia, 65 213_Boechera_lignifera, 66 342a_Boechera_pendulocarpa, 67 028_Boechera_fernaldiana_subsp._vivariensis, 68 192_Boechera_yorkii, 69 041_Boechera_formosa, 70 351a_Boechera_koehleri, 71 004_Boechera_oxylobula, 72 005_Boechera_oxylobula, 73 015_Boechera_pendulina, 74 174_Boechera_gracilipes, 75 347a_Boechera_gracilipes, 76 016_Boechera_perennans, 77 133_Boechera_perennans, 78 322a_Boechera_spatifolia, 79 226b_Boechera_fendleri, 80 229a_Boechera_fendleri, 81 150d_Boechera_texana, 82 168_Boechera_pendulina, 83 124a_Boechera_spatifolia, 84 142_Boechera_lincolnensis, 85 144_Boechera_pulchra, 86 350a_Boechera_breweri_subsp._breweri, 87 022a_Boechera_shockleyi, 88 314a_Boechera_lyallii, 89 027_Boechera_suffrutescens, 90 009a_Boechera_collinsii, 91 359a_Boechera_collinsii, 92 311a_Boechera_rollei, 93 354a_Boechera_arcuata, 94 242_Boechera_lyallii, 95 360a_Boechera_polyantha, 96 367a_Boechera_williamsii, 97 025a_Boechera_stricta, 98 013a_Boechera_nevadensis; TREE strict_consensus_from_parsimony_analysis_in_WinClada = (1,((10,11),((33,34,35,36),(7,8),((12,13),((5,6),(4,(2,3)))),(14,15,50,51,(52,53),((46,(43,44,45)),(20,(41,42))),(9,38,40,(37,39)),(16,49),(54,57,58,59,60,61,66,88,89,92,93,94,97,98,(17,18,19),(67,68,69,70,87,(21,22,23,86),(78,81,82,83,(73,74,75,(76,77)),(79,80)),(84,85),(71,72)),(95,96),(90,91),(62,63,64,65),(24,32,(29,30,31)),((47,48,(55,56)),(25,26,(27,28)))))))); TREE 'maximum likelihood, best tree from RAxML' = ((10:0.03302388188343809,11:0.012973828282484372):0.004758618612413087,(1:0.017181993912261065,((12:1.34810771504371E-6,13:1.34810771504371E-6):0.010640523539919369,((((5:0.015861024910086407,6:0.010360018658686933):0.006567676426052081,(4:0.0035309058975322412,(2:0.0017740078218039758,3:1.34810771504371E-6):0.0035369335135076595):0.005099047272663161):0.010193369445776122,((7:1.34810771504371E-6,8:0.002132099771699703):0.006505990674270652,(34:0.005434794545586559,(35:1.34810771504371E-6,(33:0.001795795083551136,36:0.0017938126090963165):1.34810771504371E-6):1.34810771504371E-6):0.005369693458277919):1.34810771504371E-6):0.005115125875824195,(((50:1.34810771504371E-6,51:1.34810771504371E-6):0.00662303584282885,((40:0.013410446707159393,((9:0.005223237760200175,38:0.004253963434092451):1.34810771504371E-6,(37:1.34810771504371E-6,39:1.34810771504371E-6):0.005536719361707841):0.003509493921800322):0.003609216944765186,((41:0.0012847125528257575,42:0.004718742136988785):0.014525757266516354,(46:0.007480690857853361,(43:0.0018431473168354032,(44:1.34810771504371E-6,45:0.0018548172576633051):1.34810771504371E-6):0.005831380348329421):0.017956461011315573):0.004806966977310905):0.0017009348286493341):1.34810771504371E-6,((52:0.0017396650353092415,53:0.001653288435960514):0.018537166920752215,(15:0.0034511991243298,((16:0.0020241305856007765,49:0.0018237418869506824):0.012433046746980753,((14:1.34810771504371E-6,(32:0.003679022872931391,(24:1.34810771504371E-6,(30:0.0018393359168467594,(29:0.0018405953611607812,31:1.34810771504371E-6):1.34810771504371E-6):0.003688269842433991):1.34810771504371E-6):0.009357163851196778):1.34810771504371E-6,(59:0.003492671231640316,(60:0.001736563610621172,(58:1.34810771504371E-6,(57:1.34810771504371E-6,((54:0.01370598440460219,(61:1.34810771504371E-6,98:1.34810771504371E-6):1.34810771504371E-6):0.0034937998046791307,((95:0.0019322385392608215,((27:0.0019154110358493557,28:0.0019215955955950773):0.011673914712740584,(55:0.0023044759146137062,(26:0.0017985921799362266,(25:1.34810771504371E-6,(47:1.34810771504371E-6,48:1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):0.0054162732844357415):1.34810771504371E-6,(56:0.004654497459442149,((63:1.34810771504371E-6,(65:1.34810771504371E-6,(62:1.34810771504371E-6,64:1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):0.005226201019569638,(66:0.0017522352233476605,(94:0.003996835460861527,(97:0.00461940649346038,(92:0.0017329837924480067,(93:0.0034779666370241408,((90:1.34810771504371E-6,91:1.34810771504371E-6):0.0017347306064766017,(89:0.0052409474584439375,(88:0.0017371104990517373,(((18:0.0018381377836956389,(17:0.003684895550338564,19:1.34810771504371E-6):1.34810771504371E-6):0.007423618407630382,(96:1.34810771504371E-6,(20:0.021313089418479158,21:0.005794609732931714):0.0038386458963238453):0.003853966109540456):1.34810771504371E-6,(87:0.0017402884742570525,((22:0.0019003739077360223,(23:1.34810771504371E-6,(86:1.34810771504371E-6,(84:1.34810771504371E-6,85:1.34810771504371E-6):0.008782710567858032):1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6,(((67:0.008067896369156006,70:0.0017355694328017584):1.34810771504371E-6,(68:0.0017401134810586033,69:1.34810771504371E-6):0.0017401826356307029):1.34810771504371E-6,((71:1.34810771504371E-6,72:1.34810771504371E-6):0.003485356130637357,(83:1.34810771504371E-6,(81:1.34810771504371E-6,(78:1.34810771504371E-6,((82:0.005223783074575515,(79:1.34810771504371E-6,80:0.0017282182611026112):0.0017302123716707537):1.34810771504371E-6,((76:1.34810771504371E-6,77:1.34810771504371E-6):0.0017277076244973373,(74:1.34810771504371E-6,(73:1.34810771504371E-6,75:1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):0.0017328598121290931):1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):0.005233363380903153):1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):0.0017335409146619141):1.34810771504371E-6):1.34810771504371E-6):0.0017975566790893822):0.0018037766729772887):1.34810771504371E-6):0.006058121360563479):0.0030029017983003456):1.34810771504371E-6):1.34810771504371E-6):0.0027256721151396337):0.0026943152143997172):1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):1.34810771504371E-6):0.005502377796439835):0.005509113950130715):0.002286081025934884):1.34810771504371E-6):0.001782841800572223):0.00507032042131838):1.34810771504371E-6):0.007154192935022931):0.004758618612413087)[% ] [% ] [% setBetweenBits = selected ]; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS; TYPESET * UNTITLED = unord: 1 - 706; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 706; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 706; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1339124236747; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 8680404448753624084; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 1797880975780294579; mqVersion 275; checksumv 0 3 1069184197 null getNumChars 706 numChars 706 getNumTaxa 98 numTaxa 98 short true bits 3458764513820540943 states 15 sumSquaresStatesOnly 1440969.0 sumSquares 1.394573851972442E22 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 855 642; setLocation 279 50; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; endTell; end;