#NEXUS [written Mon Jun 11 14:38:00 EDT 2012 by Mesquite version 2.75 (build 564) at Robert-Baratheons-MacBook.local/10.0.1.25] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=35; TAXLABELS Es Ac Ic Pd Cs Gr Me Ec Ed Bl De Er Pn Do Mm Ap Am Si Pr Pl Se Dd Cp Pt Ps Pu Ha Rh Cd Mb Od Br Bt Dp Py ; END; BEGIN CHARACTERS; TITLE 'L&W_Data'; DIMENSIONS NCHAR=24; FORMAT DATATYPE = CONTINUOUS GAP = - MISSING = ?; CHARSTATELABELS 1 LsVo, 2 LsPt, 3 LsPa, 4 LsEc, 5 LsPs, 6 WsVo, 7 WsPt, 8 WsPa, 9 WsEc, 10 WsPs, 11 LogQlen, 12 LogQwid, 13 Log_L_Vo, 14 Log_L_Pt, 15 Log_L_Pa, 16 Log_L_Ec, 17 Log_L_Ps, 18 Log_W_Vo, 19 Log_W_Pt, 20 Log_W_Pa, 21 Log_W_Ec, 22 Log_W_Ps, 23 '1/WsPs', 24 '1/LsVo' ; MATRIX Es 16.734 78.858 18.136 32.565 5.11 7.616 16.833 7.515 7.215 6.814 1.924088239 1.503597457 1.147688003 1.820933997 1.182629746 1.436839321 0.632509139 0.805815174 1.150249762 0.800017223 0.782324574 0.770054 14.67566774 5.975857536 Ac 16.5 88.0 23.5 31.7 6.5 12.012 19.62 8.909 2.303 6.006 2.081707487 1.645615538 1.299191431 2.026190159 1.45277535 1.582766749 0.894620844 1.161322811 1.37440649 1.031536446 0.444001425 0.852559499 16.65001665 6.060606061 Ic 26.946 75.349 21.956 20.958 2.895 16.449 20.762 12.237 6.82 6.62 2.089551883 1.659066242 1.520046188 1.966629376 1.431105105 1.410901719 0.551200451 1.305691383 1.40682107 1.177226843 0.923336258 0.894848799 15.10574018 3.711125956 Pd 18.254 83.551 17.954 23.671 9.83 9.83 18.957 10.431 10.231 7.723 2.242755849 1.805155787 1.504113895 2.164707501 1.49691707 1.616972454 1.235309367 1.235309367 1.520525459 1.261081794 1.252673934 1.022208032 12.94833614 5.478251342 Cs 17.382 75.924 18.781 24.675 13.287 13.486 12.987 12.687 7.692 5.195 2.567026366 1.930205716 1.807126112 2.447405447 1.840745079 1.959283528 1.690453301 1.696909521 1.680535207 1.670385306 1.453065642 1.134875817 19.24927815 5.753077897 Gr 16.65 84.654 27.784 25.075 17.252 7.623 11.134 10.631 6.721 5.617 2.259637311 1.736613776 1.481051548 2.187284794 1.703432081 1.658878252 1.49647676 1.14176323 1.306288527 1.286211429 1.087071206 0.933026889 17.80309774 6.006006006 Me 24.473 65.897 22.869 34.203 14.845 11.9 17.8 10.9 8.2 7.3 2.551541036 2.051228118 1.940228246 2.370406679 1.91078821 2.085605236 1.723121238 1.627087997 1.801961038 1.588967534 1.465354888 0.967848623 13.69863014 4.086135741 Ec 17.444 82.251 24.544 22.313 19.067 14.069 32.085 14.474 10.526 5.769 1.935003151 1.510791201 1.176649229 1.850144338 1.324948494 1.283561117 1.215285518 1.083266381 1.441305195 1.09559172 0.957266517 0.520914862 17.33402669 5.732630131 Ed 24.349 68.937 23.547 24.349 6.313 14.214 16.917 10.711 9.009 8.709 2.814457845 2.390084383 2.200938975 2.652910225 2.186393429 2.200938975 1.614693634 1.967174156 2.042781194 1.844287864 1.769134432 1.739615172 11.48237456 4.106944844 Bl 28.156 70.241 21.944 24.85 18.337 17.835 27.455 11.223 9.319 12.826 1.652709024 1.252373803 1.102279981 1.49929971 0.994024819 1.048035417 0.916037309 0.903982138 1.091330472 0.702817987 0.622078336 0.76080026 7.796663028 3.551640858 De 30.592 71.615 23.069 34.504 13.34 16.0 21.8 11.9 5.7 9.7 1.941649908 1.44815494 1.427257778 1.796653904 1.304678677 1.479519353 1.066805737 1.14576989 1.280106401 1.017196869 0.697524763 0.911438445 10.30927835 3.268828452 Er 29.629 68.368 23.523 24.925 2.603 13.927 18.938 11.223 7.415 7.515 2.689944262 2.257840699 2.161661256 2.524797138 2.061436971 2.086579429 1.10541843 1.833801838 1.967278374 1.740053225 1.560055418 1.53547638 13.30671989 3.37507172 Pn 31.563 62.225 17.936 22.344 14.028 11.912 22.823 6.807 5.106 9.409 1.953778063 1.456641989 1.452956338 1.747742968 1.207503658 1.302938985 1.10077382 1.029762748 1.312150793 0.786733813 0.661858873 0.823889218 10.62812201 3.168266641 Do 25.8 50.3 14.4 0.0 15.1 16.416 20.721 6.407 0.0 16.316 1.153662888 0.679135297 0.565282594 0.855230873 0.31202538 ? 0.332639835 0.368930231 0.470073599 -0.039682388 ? 0.290383455 6.128953175 3.875968992 Mm 22.645 60.621 23.346 16.833 20.04 15.484 18.881 14.785 6.793 19.18 1.060410867 0.785071695 0.415383192 0.843033963 0.428623348 0.28657239 0.362308584 0.250294029 0.336435859 0.230232195 -0.107527519 0.25439763 5.213764338 4.415985869 Ap 22.39 62.048 17.972 11.948 25.101 19.561 24.351 14.571 4.191 28.344 1.098127743 0.966495885 0.448181837 0.890855531 0.352724153 0.175422957 0.497818767 0.389518796 0.484644544 0.261617101 -0.279554596 0.54390314 3.528083545 4.466279589 Am 29.529 47.948 26.627 14.014 13.613 20.361 24.073 10.632 2.508 19.659 1.227238353 0.890354801 0.697487093 0.90800885 0.652560591 0.373800466 0.361192197 0.536037457 0.608768569 0.253853321 -0.373434115 0.439878666 5.086728725 3.386501405 Si 22.367 87.061 29.187 18.254 16.549 8.735 26.105 13.152 9.036 6.626 1.716 1.2031 1.0656 1.6558 1.1812 0.9774 0.9348 0.6573 1.1327 0.835 0.672 0.5373 15.09206158 4.470872267 Pr 14.444 80.04 19.96 25.877 12.437 6.312 15.731 8.016 5.611 6.613 2.185752404 1.572215697 1.345439884 2.089059484 1.485912941 1.59866633 1.280468039 0.985919394 1.382508735 1.089710113 0.934792673 0.965204588 15.12172993 6.923289947 Pl 19.417 82.495 19.215 30.383 16.7 6.006 17.417 10.51 6.806 6.607 2.492009275 1.969564607 1.780191406 2.408436902 1.775649664 1.974639929 1.714725746 1.270594603 1.732982627 1.513611991 1.32490122 1.279965398 15.13546239 5.150126178 Se 24.3 77.7 23.8 23.6 16.3 6.319 27.583 9.127 10.933 15.245 2.107905397 1.678576739 1.493511671 1.998326416 1.484482354 1.4808174 1.320093002 0.908553753 1.548546897 1.068233448 1.146644745 1.057295404 6.559527714 4.115226337 Dd 35.276 68.341 26.13 14.472 21.407 4.016 18.975 9.136 5.823 9.639 2.315154638 1.835415399 1.862633972 2.149835968 1.732294048 1.475683192 1.645710447 0.918948342 1.593336423 1.275910729 1.080301428 0.822470678 10.37452018 2.834788525 Cp 24.3 65.9 20.6 0.0 25.4 9.5 24.2 10.4 0.0 8.4 1.777283529 1.392180745 1.162889802 1.596168943 1.091150749 ? 1.182117245 0.755007134 1.161098895 0.794316868 ? 0.540711522 11.9047619 4.115226337 Pt 23.896 67.671 37.851 19.578 22.59 6.993 13.387 8.991 9.99 8.591 1.416687848 0.881639165 0.795013058 1.247090442 0.994765206 0.708456172 0.770604079 0.261351376 0.543371111 0.370495846 0.416253336 0.117391565 11.64008846 4.184800803 Ps 27.956 66.133 23.647 8.316 20.942 7.422 13.24 11.334 7.122 9.729 1.773761083 1.208042491 1.220236115 1.594179307 1.147537134 0.693675564 1.094779238 0.644282033 0.895649068 0.828144291 0.626363052 0.580822323 10.27854867 3.577049649 Pu 17.269 71.486 41.867 0.0 22.691 3.607 10.921 23.447 0.0 17.034 1.825039377 1.509857819 1.062306567 1.679260374 1.446911219 ? 1.180893013 0.382185519 0.863301784 1.19512666 ? 0.690143352 5.870611718 5.790723261 Ha 17.1 86.0 28.5 12.7 28.0 5.015 16.75 7.924 7.121 23.371 1.228412519 0.78722905 0.46140863 1.16291097 0.683257379 0.33221624 0.67557055 -0.071316544 0.45242733 0.127356986 0.080953505 0.311197889 4.278807069 5.847953216 Rh 22.777 62.837 22.778 21.478 29.771 9.4 17.4 10.2 12.2 22.0 1.192891358 0.794951349 0.55038788 0.991106801 0.550406947 0.524885196 0.666684781 0.88942657 1.178596614 -0.80095 0.279251189 0.350831414 4.545454545 4.390393818 Cd 27.566 75.856 19.354 21.31 41.544 7.632 17.711 10.078 12.133 23.092 1.241921178 0.867953426 0.68229493 1.121911116 0.528691914 0.570504627 0.860429487 0.124559539 0.490164261 0.245295532 0.325889375 0.413881532 4.330504071 3.627657259 Mb 18.036 87.976 20.942 12.525 31.363 6.306 21.622 11.111 5.205 18.819 1.166597871 0.908969454 0.422738097 1.110962083 0.487616026 0.264375605 0.663015469 -0.033648163 0.501493734 0.212351018 -0.116981395 0.250279618 5.313778628 5.544466622 Od 17.183 85.914 28.772 19.88 37.563 3.697 14.786 13.886 7.592 20.679 0.733063089 0.395386409 -0.031837921 0.667127028 0.19203314 0.031479469 0.307823359 -0.699087461 -0.097086209 -0.12435975 -0.386580712 -0.258762727 4.835823783 5.819705523 Br 47.904 52.694 28.543 0.0 49.102 10.778 12.275 10.479 0.0 22.455 1.158202701 0.762644767 0.83857448 0.879963868 0.613702319 ? 0.849301883 0.19074088 0.247224202 0.178522541 ? 0.47540913 4.453351147 2.08750835 Bt 27.209 64.658 43.976 0.0 11.345 12.864 30.352 8.643 0.0 10.05 1.304483301 1.095535018 0.739195882 1.115105568 0.947699025 ? 0.359287801 0.413859333 0.786670615 0.241147814 ? -0.003639876 9.950248756 3.675254511 Dp 30.261 72.545 43.888 0.0 30.26 16.901 58.753 23.742 0.0 17.103 1.484377802 1.550573233 0.965261078 1.344985287 1.126723592 ? 0.965246726 0.712290204 1.253407849 0.859895103 ? 0.637552182 5.84692744 3.304583457 Py 34.269 74.55 20.741 35.27 30.061 9.9 11.6 2.5 3.3 22.5 1.160082224 0.711532222 0.694983656 1.032529872 0.476911916 0.707487684 0.638085648 0.155717419 0.224540214 -0.441977767 -0.321403836 0.202342631 4.444444444 2.918089235 ; END; BEGIN TREES; Title BasicTrees; LINK Taxa = Taxa; TRANSLATE 1 Es, 2 Ac, 3 Ic, 4 Pd, 5 Cs, 6 Gr, 7 Me, 8 Ec, 9 Ed, 10 Bl, 11 De, 12 Er, 13 Pn, 14 Do, 15 Mm, 16 Ap, 17 Am, 18 Si, 19 Pr, 20 Pl, 21 Se, 22 Dd, 23 Cp, 24 Pt, 25 Ps, 26 Pu, 27 Ha, 28 Rh, 29 Cd, 30 Mb, 31 Od, 32 Br, 33 Bt, 34 Dp, 35 Py; TREE unimetric = (1:1.0,(2:1.0,(3:1.0,(4:1.0,(5:1.0,(6:1.0,((7:1.0,8:1.0):1.0,((9:1.0,(10:1.0,(11:1.0,(12:1.0,(13:1.0,(14:1.0,((15:1.0,16:1.0):1.0,17:1.0):1.0):1.0):1.0):1.0):1.0):1.0):1.0,((18:1.0,(19:1.0,20:1.0):1.0):1.0,(21:1.0,((22:1.0,(23:1.0,(24:1.0,25:1.0):1.0):1.0):1.0,((31:1.0,30:1.0):1.0,((27:1.0,(28:1.0,29:1.0):1.0):1.0,(26:1.0,(32:1.0,((33:1.0,34:1.0):1.0,35:1.0):1.0):1.0):1.0):1.0):1.0):1.0):1.0):1.0):1.0):1.0):1.0):1.0):1.0):1.0):1.0):1.0; TREE min3 = (1:10.8,(2:18.3,(3:15.3,(4:21.0,(5:36.9,(6:33.9,((7:33.6,8:18.9):12.0,((9:49.3,(10:18.9,(11:12.0,(12:26.1,(13:23.1,(14:39.1,((15:4.4,16:4.4):12.7,17:5.2):3.0):3.0):3.0):3.0):21.6):3.0):6.0,((18:21.9,(19:18.9,20:33.6):3.0):3.0,(21:33.7,((22:33.3,(23:20.1,(24:5.2,25:7.8):3.0):3.0):12.0,((31:5.2,30:5.2):15.0,((27:11.8,(28:8.8,29:8.8):3.0):36.3,(26:26.1,(32:42.1,((33:5.2,34:36.1):3.0,35:8.2):3.0):3.0):3.0):3.0):3.0):3.0):18.6):3.0):3.0):3.0):3.0):3.0):8.2):3.0):7.8):3.0; END; BEGIN LABELS; TAXAGROUPLABEL Stem COLOR = (RGB 0.03529412 0.03529412 1.0) ; TAXAGROUPLABEL Tem COLOR = (RGB 0.03529412 1.0 0.22745098) ; TAXAGROUPLABEL Ant COLOR = (RGB 1.0 0.41960784 0.03529412) ; TAXAGROUPLABEL Dam COLOR = (RGB 0.65490196 0.13333333 1.0) ; TAXAGROUPLABEL Lep COLOR = (RGB 1.0 0.03529412 0.03529412) ; TAXAGROUPLABEL Sem COLOR = (RGB 1.0 0.06666667 1.0) ; END; BEGIN SETS; TAXPARTITION * UNTITLED = Stem : 1 - 8, Tem : 9 - 17, Ant : 18 - 20, Sem : 21, Dam : 22 - 25, Lep : 26 - 35; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = Brownian_default: 1 - 24; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = Squared: 1 - 24; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1339439880515; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 3576460502391940962; tell It; setDefaultOrder 0 1 2 3 5 4 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 6845529427123427398; tell It; setDefaultOrder 0 1 2 5 6 7 8 9 10 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24; attachments ; endTell; mqVersion 275; checksumv 0 3 3057713852 null numChars 24 numItems 1 min -0.80095 max 88.0 sumSquares 306758.1674161502 NumFiles 1 NumMatrices 1 errorReportedDuringRun; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 149; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1085 918; setLocation 437 88; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #6845529427123427398 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 936 851; setLocation 437 88; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.NoColor.NoColor; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges on; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames on; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize on; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.cont.ItemsEditorForInfoPanel.ItemsEditorForInfoPanel; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;