#NEXUS [written Wed Jun 20 15:42:22 EDT 2012 by Mesquite version 2.75 (build 564) at Robert-Baratheons-MacBook.local/10.0.1.25] BEGIN TAXA; TITLE Untitled_Taxa_Block; DIMENSIONS NTAX=59; TAXLABELS Aethalionopsis Brycon_ Chanos_ Charitosomus_ Cromeria_ Dastilbe_ Diplomystus_ Gonorynchus_ Gordichthys_ Grasseichthys_ Halecopsis Judeichthys_ Kneria_ Notogoneus_ Opsariichthys_ Parachanos_ Parakneria_ Phractolaemus_ Ramallichthys_ Rubiesichthys_ Tharrhias_ Charitopsis Aethalionopsis_robustus Brycon_dentex Chanos_chanos Chanos_cyprinella Chanos_salmoneus Charitopsis_spinosus Charitosomus_major Charitosomus_hakelensis Cromeria_nilotica Cromeria_nilotica_occidentalis Dastilbe_crandalli Dastilbe_longatus Dastilbe_moraesi Diplomystus_dentatus Gonorynchus_abbreviatus Gonorynchus_gonorynchus Gonorynchus_greyi Gonorynchus_mosleyi Gonorynchus_sp. Gordichthys_conquensis Grasseichthys_gabonensis Judeichthys_haasi Kneria_articulata Kneria_katangae Kneria_sp. Kneria_wittei Notogoneus_osculus Opsariichthys_bidens Opsariichthys_uncirostris Parachanos_aethiopicus Parakneria_malaissei Parakneria_tanzaniae Phractolaemus_ansorgei Ramallichthys_orientalis Rubiesichthys_gregalis Tharrhias_araripis Tharrhias_rochae ; IDS _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 3654a1b6 -c1e7 - 4cb2 -917d - 0f115e3e5f55 f40f6755 -48ec -405f -8252 -c081a0c19096 6b660524 - 0e68 -483e -9681 -00e0e9977144 fd40f545 -5687 - - 9c70 -b3d7ebd45855 b1355459 -4581 - 4ef5 - bf0d - ea6b5f461103 aaee5e9d - 9b4c -41f6 - ; END; BEGIN CHARACTERS; TITLE ';'; DIMENSIONS NCHAR=94; FORMAT DATATYPE = STANDARD GAP = - MISSING = ? SYMBOLS = " 0 1 2 3 4 5 6 7 8 9 A B C D E F G H J K M N"; CHARSTATELABELS 1 Orbitosphenoid, 2 Pterosphenoids, 3 Posterolateral_expansion_of_exoccipitals, 4 Cephalic_ribs, 5 'Brush-like cranial intermusculature', 6 Frontals, 7 Frontal_bones_in_adult, 8 Frontal_bones, 9 Foramen_for_olfactory_nerves_in_frontal_bones, 10 Relative_position_of_the_parietals, 11 Parietal_portion_of_the_supraorbital_canal, 12 Parietals, 13 Supraoccipital_crest, 14 Supraoccipital_bone_in_dorsal_view, 15 Foramen_magnum, 16 Mesethmoid, 17 Lateral_ethmoids, 18 Premaxilla, 19 Premaxillary_?gingival_teeth?, 20 Maxillary_articular_process, 21 Articular_process_of_maxilla, 22 Dorsal_and_ventral_borders_of_the_maxillary_articular_process, 23 Posterior_margin_of_the_maxilla, 24 Premaxilla, 25 Premaxillary_ascending_process, 26 Dentary_component_of_coronoid_process, 27 Maximum_height_of_the_dentary, 28 Articulation_between_dentary_and_anguloarticular, 29 Notch_in_the_anterodorsal_border_of_the_dentary, 30 Mandibular_sensory_canal, 31 Enlarged_lower_posterior_retroarticular_process, 32 Quadrate_with, 33 'Quadrate-mandibular articulation', 34 Symplectic, 35 Symplectic_and_quadrate, 36 Metapterygoid, 37 A_patch_of_about_twenty_conical_teeth_on_endopterygoids_and_basibranchial_2, 38 Ectopterygoids, 39 Teeth_on_vomer_and_parasphenoid, 40 Vomer, 41 Articular_head_of_hyomandibular, 42 Anteroventral_process_of_hyomandibular, 43 Ossified_interhyal, 44 Teeth_on_fifth_ceratobranchial, 45 First_basibranchial_in_adult_specimens, 46 Fifth_basibranchial_in_adult_specimens, 47 First_pharyngobranchial_in_adult_specimens, 48 Opercle_size, 49 Shape_of_opercule, 50 Opercular_spines, 51 Opercular_apparatus_on_external_surface_of_operculum, 52 Opercular_borders, 53 Angle_formed_by_preopercular_limbs, 54 Posterodorsal_limb_of_preopercle, 55 Subopercular_clefts, 56 Interopercle, 57 Number_of_infraorbitals, 58 Infraorbital_bones_not_including_lacrimal, 59 Lacrimal, 60 Supraorbital, 61 Anterior_neural_arches, 62 Neural_arch_of_first_vertebra_and_exoccipitals, 63 Neural_arch_of_first_vertebra_and_supraoccipital, 64 Spine_on_the_neural_arch_of_first_vertebra, 65 First_two_anterior_parapophyses, 66 Rib_on_third_vertebral_centrum, 67 'Epipleural, epicentral, and epineural intermuscular bones', 68 'Anterior (first six) epicentral bones', 69 Anterior_supraneurals, 70 Third_and_fourth_supraneurals, 71 Posterior_process_on_the_posterior_margin_of_first_supraneural, 72 Supraneurals_posterior_to_fourth_vertebra, 73 Postcleithra, 74 Lateral_line_piercing_supracleithrum_through, 75 Fleshy_lobe_of_paired_fins, 76 Caudal_fin_margin, 77 Caudal_scutes, 78 'Ural centra, preural centrum one and uroneural one', 79 Neural_arch_of_preural_centrum_1, 80 Uroneurals, 81 Reduction_in_the_number_of_autogenous_uroneurals, 82 Anterior_extent_of_first_autogenous_uroneural, 83 Parhypural_and_preural_centrum_1, 84 Number_of_hypurals, 85 Hypurals_1_and_2, 86 Hypural_1_and_terminal_centrum, 87 'Hypural 2 and terminal, or corresponding centrum', 88 Last_hypural, 89 'Hypural 5 (and 6 if present) and second ural centrum', 90 Haemal_arch_and_preural_centrum_2, 91 Posterolateral_process_of_caudal_endoskeleton, 92 Type_of_scales, 93 Presence_of_scales_on_body, 94 Lateral_line ; MATRIX Aethalionopsis ?????????????????????????????????????????????????????????????????????????????????????????????? Brycon_ ?????????????????????????????????????????????????????????????????????????????????????????????? Chanos_ ?????????????????????????????????????????????????????????????????????????????????????????????? Charitosomus_ ?????????????????????????????????????????????????????????????????????????????????????????????? Cromeria_ ?????????????????????????????????????????????????????????????????????????????????????????????? Dastilbe_ ?????????????????????????????????????????????????????????????????????????????????????????????? Diplomystus_ ?????????????????????????????????????????????????????????????????????????????????????????????? Gonorynchus_ ?????????????????????????????????????????????????????????????????????????????????????????????? Gordichthys_ ?????????????????????????????????????????????????????????????????????????????????????????????? Grasseichthys_ ?????????????????????????????????????????????????????????????????????????????????????????????? Halecopsis 120??000020?00????????????????000????????0?????0000?1000?00????????????????????????????????00? Judeichthys_ ?????????????????????????????????????????????????????????????????????????????????????????????? Kneria_ ?????????????????????????????????????????????????????????????????????????????????????????????? Notogoneus_ ?????????????????????????????????????????????????????????????????????????????????????????????? Opsariichthys_ ?????????????????????????????????????????????????????????????????????????????????????????????? Parachanos_ ?????????????????????????????????????????????????????????????????????????????????????????????? Parakneria_ ?????????????????????????????????????????????????????????????????????????????????????????????? Phractolaemus_ ?????????????????????????????????????????????????????????????????????????????????????????????? Ramallichthys_ ?????????????????????????????????????????????????????????????????????????????????????????????? Rubiesichthys_ ?????????????????????????????????????????????????????????????????????????????????????????????? Tharrhias_ ?????????????????????????????????????????????????????????????????????????????????????????????? Charitopsis ?????????????????????????????????????????????????????????????????????????????????????????????? Aethalionopsis_robustus ?????000?21000?0?0?0?01??000?000110000??0??????1000?10000000????0??0???0??0010000?00000001000? Brycon_dentex 0000000002001?0000000000001000000000000000000000000000000000100011001000000001000?100010000000 Chanos_chanos 111200000202200200011011101010001110000001010001000010001000110001100000100011100N200000011000 Chanos_cyprinella 111200000202200200011011101010001110000001010001000010001000110001100000100011100N200000011000 Chanos_salmoneus 111200000202200200011011101010001110000001010001000010001000110001100000100011100N200000011000 Charitopsis_spinosus ?????100?2?2?0?000???00010100?100??01100?0?????0110?000011?0?????110????1?0001??0N11???00?0?00 Charitosomus_major 120111000202000000?0000010100?100000110010?????0100?0000110011???1101100100001000N111110010?00 Charitosomus_hakelensis 120111000202000000?0000010100?100000110010?????0100?0000110011???1101100100001000N111110010?00 Cromeria_nilotica 1201001002020011100000001120010102N001011011111000010000210001121110N201100001101N010000000010 Cromeria_nilotica_occidentalis 1201001002020011100000001120010102N001011011111000010000210001121110N201100001101N010000000010 Dastilbe_crandalli 110??0000201?000?0?2101110001000110000??01?????1000?1000?0001?00011000000000000001000000010000 Dastilbe_longatus 110??0000201?000?0?2101110001000110000??01?????1000?1000?0001?00011000000000000001000000010000 Dastilbe_moraesi 110??0000201?000?0?2101110001000110000??01?????1000?1000?0001?00011000000000000001000000010000 Diplomystus_dentatus 00000000000010000000000000?00000000000000??????000000000000?0000000000000000100000?00000000000 Gonorynchus_abbreviatus 120111N11202010001120000101101000001110010011010100100002121110111101100101001001N111110000101 Gonorynchus_gonorynchus 120111N11202010001120000101101000001110010011010100100002121110111101100101001001N111110000101 Gonorynchus_greyi 120111N11202010001120000101101000001110010011010100100002121110111101100101001001N111110000101 Gonorynchus_mosleyi 120111N11202010001120000101101000001110010011010100100002121110111101100101001001N111110000101 Gonorynchus_sp. 120111N11202010001120000101101000001110010011010100100002121110111101100101001001N111110000101 Gordichthys_conquensis ??0??000010100?0?0?20111101010001100001?01?????1000?2000?0001??0?1?000100101000001000000110000 Grasseichthys_gabonensis 12000010020200111000000011200100010N0N001011101000010001210?01121100N201100001101N010000000010 Judeichthys_haasi 1?011100020200?000?0000010100??00?00110010?????0100?00001100?????1101100100001000N11?110010?00 Kneria_articulata 12010000020310111001200011200100000001011100111000110000000021121111N201100001101N000000000000 Kneria_katangae 12010000020310111001200011200100000001011100111000110000000021121111N201100001101N000000000000 Kneria_sp. 12010000020310111001200011200100000001011100111000110000000021121111N201100001101N000000000000 Kneria_wittei 12010000020310111001200011200100000001011100111000110000000021121111N201100001101N000000000000 Notogoneus_osculus 12011100020201000??2000010110?100?01010010?????0100?0010112111?111101100100001000N211110000100 Opsariichthys_bidens 000000000000000000000000000000000000000000000000000000000000100011001000000001000?000010010000 Opsariichthys_uncirostris 000000000000000000000000000000000000000000000000000000000000100011001000000001000?000010010000 Parachanos_aethiopicus ??0??0000201?0?0?0?110111000?000110000??01?????1000?1000?000?????1?0???00000?00002000000010?0? Parakneria_malaissei 12010000020310111001200011200100000001011101111000011000001021121110N201100001101N000000000000 Parakneria_tanzaniae 12010000020310111001200011200100000001011101111000011000001021121110N201100001101N000000000000 Phractolaemus_ansorgei 1201020002020010100201001020010022N0010201011010000101011200210111101101100201101N010001000000 Ramallichthys_orientalis 1?011100020200?000?0000010100?100?00110010?????0100?000011001????1101100100001000N111110010?00 Rubiesichthys_gregalis ??0??000020100?0?0?2011110101000110000??01?????1000?2000?0001??0?1?000100?00000001000000010000 Tharrhias_araripis 110?000002012002?0?11011101010001110000001?1???1000?100010001100011000000000000101000000010000 Tharrhias_rochae 110?000002012002?0?11011101010001110000001?1???1000?100010001100011000000000000101000000010000 ; BLOCKID 14e7932b; END; BEGIN TREES; Title Trees; LINK Taxa = Untitled_Taxa_Block; TRANSLATE 1 Aethalionopsis, 2 Brycon_, 3 Chanos_, 4 Charitosomus_, 5 Cromeria_, 6 Dastilbe_, 7 Diplomystus_, 8 Gonorynchus_, 9 Gordichthys_, 10 Grasseichthys_, 11 Halecopsis, 12 Judeichthys_, 13 Kneria_, 14 Notogoneus_, 15 Opsariichthys_, 16 Parachanos_, 17 Parakneria_, 18 Phractolaemus_, 19 Ramallichthys_, 20 Rubiesichthys_, 21 Tharrhias_, 22 Charitopsis, 23 Aethalionopsis_robustus, 24 Brycon_dentex, 25 Chanos_chanos, 26 Chanos_cyprinella, 27 Chanos_salmoneus, 28 Charitopsis_spinosus, 29 Charitosomus_major, 30 Charitosomus_hakelensis, 31 Cromeria_nilotica, 32 Cromeria_nilotica_occidentalis, 33 Dastilbe_crandalli, 34 Dastilbe_longatus, 35 Dastilbe_moraesi, 36 Diplomystus_dentatus, 37 Gonorynchus_abbreviatus, 38 Gonorynchus_gonorynchus, 39 Gonorynchus_greyi, 40 Gonorynchus_mosleyi, 41 Gonorynchus_sp., 42 Gordichthys_conquensis, 43 Grasseichthys_gabonensis, 44 Judeichthys_haasi, 45 Kneria_articulata, 46 Kneria_katangae, 47 Kneria_sp., 48 Kneria_wittei, 49 Notogoneus_osculus, 50 Opsariichthys_bidens, 51 Opsariichthys_uncirostris, 52 Parachanos_aethiopicus, 53 Parakneria_malaissei, 54 Parakneria_tanzaniae, 55 Phractolaemus_ansorgei, 56 Ramallichthys_orientalis, 57 Rubiesichthys_gregalis, 58 Tharrhias_araripis, 59 Tharrhias_rochae; TREE 'Figure 2+' = ((2,15,(1,((((3,21),6,16),(9,20)),(((8,14),4,12,19,22),(18,((5,10),(13,17))))))),7); END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Mk1 (est.)': 1 - 94; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 94; END; BEGIN NOTES; SUT TAXA = Untitled_Taxa_Block TAXON = 23 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 24 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 25 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 26 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 27 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 28 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 29 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 30 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 31 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 32 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 33 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 34 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 35 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 36 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 37 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 38 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 39 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 40 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 41 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 42 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 43 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 44 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 45 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 46 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 47 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 48 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 49 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 50 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 51 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 52 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 53 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 54 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 55 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 56 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 57 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 58 NAME = color INTEGER = 8; SUT TAXA = Untitled_Taxa_Block TAXON = 59 NAME = color INTEGER = 8; TEXT FILE TEXT = 'Note: Student Michael Jones has modified some of the taxa labels to link with the appropriate NCBI and UBio entries.^n^n^nTaxon List: Leah Mabee^nMatrix: Carin Rambow^nMerge: Paula Mabee ((expanded character matrix, annotated fossils)^nFree text: unkown^nMerge notes: Expanded taxa in matrix list to include species in materials and methods (taxon list)'; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1340221342514; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 6141705228919524580; tell It; setSelected 11; setDefaultOrder 8 1 14 6 20 20 0 64 64 65 19 66 71 71 4 73 74 76 77 78 79 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 61; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 439512086390792358 14e7932b; mqVersion 275; checksumv 0 3 3567812847 14e7932b getNumChars 94 numChars 94 getNumTaxa 59 numTaxa 59 short false bits 2097167 states 2097167 sumSquaresStatesOnly 1.89115999986341E14 sumSquares 1.89115999986341E14 longCompressibleToShort false usingShortMatrix false NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 364; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1288 739; setLocation 0 86; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #6141705228919524580 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #6141705228919524580; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 924 672; setLocation 0 86; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #6141705228919524580 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 1458.1235062852876.8181793675674124343; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 924 672; setLocation 0 86; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.arrow; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientRight; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '((2,15,(1,((((3,21),6,16),(9,20)),(((8,14),4,12,19,22),(18,((5,10),(13,17))))))),7);'; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #439512086390792358 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 924 672; setLocation 0 86; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.NoColor.NoColor; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges on; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames on; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize on; toggleColorsPanel off; toggleDiagonal on; setDiagonalHeight 80; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.categ.SmallStateNamesEditor.SmallStateNamesEditor; tell It; panelOpen true; endTell; endTell; endTell; getEmployee #mesquite.basic.ManageFileComments.ManageFileComments; tell It; editFileComment 0; tell It; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 924 722; setLocation 0 86; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; showWindow; endTell; endTell; endTell; end;