#NEXUS [written Tue Jul 10 10:10:43 EDT 2012 by Mesquite version 2.75 (build 564) at Robert-Baratheons-MacBook.local/10.0.1.136] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=30; TAXLABELS Theropoda Prosauropoda Vulcanodon Barapasaurus Omeisaurus Shunosaurus Patagosaurus Mamenchisaurus Apatosaurus Barosaurus Brachiosaurus Camarasaurus Dicraeosaurus Diplodocus Haplocanthosaurus Amargasaurus Euhelopus Jobaria Malawisaurus Nigersaurus Rayososaurus Rebbachisaurus Alamosaurus Nemegtosaurus Neuquensaurus Opisthocoelicaudia Rapetosaurus Saltasaurus T.colberti A._chilensis ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=234; FORMAT DATATYPE = STANDARD GAP = - MISSING = ? SYMBOLS = " 0 1 2 3 4 5"; MATRIX Theropoda 000000000000000000000000000000000??00000000000000000000000000000000?00000000000010?000000?0000000000000000000?00000000000000000000000000??00000?000001000000000001100?0000000000000000000000000000000000000000000000000000??00000000000000 Prosauropoda 000000000000000000000000000000000??00000000000000000000000000000000?00000000000110?000000?1000000000000000000?00000000000000000000000000??00000?000000000000000001000?00000000000100000000000000000000000000000000000000000000000000000000 Vulcanodon ????????????????0????????????????????????????????????????????????????????????0?????????????????????????????1????0??0?00???????100001????????????00??10?????????1010?11101001????0???????1???00010101010???000?00001000010?100100100?011000 Barapasaurus ?????????????????????????????????????????????????????????????????????1?0????00??01???0100??10101101110100001100?0??0?00???????1000000000?????01?00?0110000000?0101011110100????????????01100010101011101000101111?1?10???010???????1??11?0 Omeisaurus 11100011011?000?01011000010111?11?0?1??11100?0?0?0?00110000?1???111011111?0001040111010?0?3101?11011100000021101?010000000000010000?000???100?11000011000?00000101011010100101000000111?110001010101?1000?01011??0101001111111111111111110 Shunosaurus 01100011011000000001??000001110110001001100000000?000110000?101?111011120?00000311?100100?210000?00000000?010?000010000000000010000?000???0?00111010100000000001010110101001010000011010110001010?01110100?101?10010?00111101110111?111110 Patagosaurus 1?100?11????????0????????????????????????1?????????????0????????1?10111???0001??011?00100??10101101??0100002??0??????00???????1???0?000???1?00??00??110?0?000?0101111110100?????????????1100010101011101000001??????????101011???????????0 Mamenchisaurus ????????????????????????????????110???????????????????10000?10111?1?1111000011?401?101011031010?1?1?10?00002?????011010000000010000?000???10001100?01?????????01010111101001????????????1100????01011101001101?1101110?11?????1?11?1??1??0 Apatosaurus 00111112011?111?010111?101011111100020?1?0000100000011??????????221202121???011401101011115101111111100000021?110011000011110111110000011111001100101100110000010101101010011111000011111100110100011101001101110111101111111111?1111?1110 Barosaurus ????????????????????????????????????????????????????????????????????????????01??011?111?11?101????111000000?????0?11011111110111111110011????01?00?01????????0??????????????????????????????11???????????????????????????????????????????0 Brachiosaurus 11110011111100010101100001011111110010111100000001100110011111121110011210001103011001100?31010111111100100211010?100000001100100000000???1011??10??110101000001010111101002111111111011110101110111111100110111111110011110111?11?1??11?0 Camarasaurus 1111001111110001010110010101110011011011110000000010011001111111111011121000010201101010103101011011110010021101001000000011011000000000??100?10101011010100000101011110100111111100111111000111011111010011011101111001111011111111111110 Dicraeosaurus 00?11?????0??00?01111111011111?????1?0??10001110101011110???????221202121?00011201101010113111110011100000121?1?0?11000010110111000000011?11001?00??110001000?0101011110???1???????????1110011010001110100110111011110??111111?11????11??0 Diplodocus 001111120111111101011101010111111000201110000100001011110101101?221202121110011401101111115101111111100000021111001101111111011111111001111100110010110001000001010111101001???????????11100110100011101011101?101111001111111111111?11110 Haplocanthosaurus ????????????????0???????????????????????????????0???????????????????????????01?3011000100?21010110111100000211010?10000000110010000000????1100??10??100001000??????????????????????????1110001010111110100???????????????????????????????0 Amargasaurus ??????????1??00101111?1101111?????????????00111011?011??????????????????????001301??1010105111????1??0000?12??1????0?????????????????0???????0??????1??0?1????0101011010?001????????????1100???????1110?00???????????????????????????????0 Euhelopus 11100?11??1????10??????????????1100??0?111????????????10011?????1?101112101011?41111011011210101111?11011?03??01??????????????????????????1011??????110010000?110101???????????????????11101010101111111001101?10111?00?11101111?1??1111?0 Jobaria 11110011111100010101100001011101110?10?11?000??000?001000???????11101110000001?3011000100?310101111111000002110100100000001100100000000???10001?001011010100000101011110100101110000111111000101011111010011011101111001111011111????????0 Malawisaurus 11?????1??1???????????????????????????????????????????100???????1?1??11210?011??1100011?0??10101?01?1101110???????1??10?001110100001000???101?0?11??1?????00011101011000100???1??111????????????111?111?????11110???????1?????????????1??1 Nigersaurus 00110?1100???0011?001???1????1?1110???????0001?00??01110?100????22110212010101??0110001?0?????????????????????????????????????????????????1100???????1020?0??????????????????????????????????????????????????????????????????????????????? Rayososaurus ?????????01??0011?00110?1???110?110??0????100101011011????????????1??212???101??011000100??1?10???1110000?1?????0010000000110110000000011?1?????1???11020?000101000111101001????????????11??01010111110?00?10??1?1???0??10001111?????????0 Rebbachisaurus ?????????????????????????????????????????????????????????????????????????????1??????????0??11??111111000011?????????????????????????????????????????110201?????1?0??????????????????????????????011??????????????????????????????????????0 Alamosaurus ????????????????????????????????????????????????????????????????????????????11??1100001?0??1010110101101110??????1231100001101100001010???????0?111111101111?11111101100111???1111112??????????0111??????????????????????????????????????0 Nemegtosaurus 01?1?011?10100010101010101010101111211111?11000100010110111??01?111?02121000?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Neuquensaurus ????????????????????????????????????????????????????????????????????????????11??010?001?0??101????1?1?0111031?0?1??3010?0011?110000101110???????????11101011111111101101111?????????????111101?011111211111111?1011101??1110?????1???????1 Opisthocoelicaudia ?????????????????????????????????????????????????????????????????????????????1?????????0104101011110110111031?0??1221200001101100001020100??110?1111110011111111111011011111??1111112??1111?0110111112111011111101110111111011111111011110 Rapetosaurus 0011?111?10?000?000101010101010?1112111???11?0100?110100111?????11110212100011??110?011?0??10101?01011011103?????????1??0???????00???1????1?????????1110??10011101101?00110?????1?1????11101011011111?1101???????????????????????????????1 Saltasaurus ?????????????00??101?00101????????????????01000101???1??????????????????????11??011000110??10101?1101101110312011????10?00111110000101110?1?????11?011101011111111101101111????????????11111011011111211111111110????????????????????????1 T.colberti ?????????????????????????????????????????????????????????????????????????????1??110000100??101011010100?1103120??????10?001101100001010???1??10?11?0101010????1101111101???????????????111110110111??????????????????????????????????????? A._chilensis ????????????????????????????????????????????????????????????????????????????11??????????????????????????11????????????????????????10?1??????????????1?????????1101?????????????????????????????????1121101???????????????????????????????? ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS; TYPESET * UNTITLED = unord: 1 - 7 9 - 36 38 - 63 65 67 - 197 199 - 234, ord: 8 37 64 66 198; END; BEGIN TREES; Title Imported_trees; LINK Taxa = Taxa; TRANSLATE 1 Theropoda, 2 Prosauropoda, 3 Vulcanodon, 4 Barapasaurus, 5 Omeisaurus, 6 Shunosaurus, 7 Patagosaurus, 8 Mamenchisaurus, 9 Apatosaurus, 10 Barosaurus, 11 Brachiosaurus, 12 Camarasaurus, 13 Dicraeosaurus, 14 Diplodocus, 15 Haplocanthosaurus, 16 Amargasaurus, 17 Euhelopus, 18 Jobaria, 19 Malawisaurus, 20 Nigersaurus, 21 Rayososaurus, 22 Rebbachisaurus, 23 Alamosaurus, 24 Nemegtosaurus, 25 Neuquensaurus, 26 Opisthocoelicaudia, 27 Rapetosaurus, 28 Saltasaurus, 29 T.colberti, 30 A._chilensis; TREE Imported_tree_0 = (1,(2,(3,(6,(4,7,(5,8),(18,((15,(((9,(10,14)),(13,16)),(20,21,22))),(12,(11,(17,(19,(24,27,29,30,((23,26),(25,28)))))))))))))); END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Mk1 (est.)': 1 - 234; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1341929443789; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 6101249751928419843; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 7005890038064907158; mqVersion 275; checksumv 0 3 3348054357 null getNumChars 234 numChars 234 getNumTaxa 30 numTaxa 30 short true bits 63 states 63 sumSquaresStatesOnly 16587.0 sumSquares 16587.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 148; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 467; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; endTell; end;