#NEXUS
[written Thu Jul 19 15:35:02 EDT 2012 by Mesquite  version 2.75 (build 564) at Robert-Baratheons-MacBook.local/10.0.1.136 (Pol)]

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=14;
	TAXLABELS
		Allosaurus_fragilis Tyrannosaurids Pelecanimimus_polyodon Harpymimus_okladnikovi Shenzousaurus_orientalis Beishanlong_grandis Garudimimus_brevipes Archaeornithomimus_asiaticus Sinornithomimus_dongi Gallimimus_bullatus Anserimimus_planinychus Struthiomimus_altus Ornithomimus_edmontonicus Qiupalong_henanensis 
	;

END;


BEGIN CHARACTERS;
	TITLE  Character_Matrix;
	DIMENSIONS  NCHAR=48;
	FORMAT DATATYPE = STANDARD GAP = - MISSING = ? SYMBOLS = "  0 1 2";
	MATRIX
	Allosaurus_fragilis           000000000000000000000000000000000000000100010100
	Tyrannosaurids                0001000000000000000000000(1 2)(0 1)000?0000010(0 1)10101000(0 1)
	Pelecanimimus_polyodon        0?0??0?10010???0?1?1????1??110111??????0????????
	Harpymimus_okladnikovi        1011110?10101011110?01001100000110??00?010?0??00
	Shenzousaurus_orientalis      1?1101??101?1??1???????????1??0?100???0?0?0000??
	Beishanlong_grandis           ???????????????????101001?1?????1??00?????????00
	Garudimimus_brevipes          11111111111111111?0??????????????00001?01?100001
	Archaeornithomimus_asiaticus  ??????????????????0101001201101?110?1?1?1?100011
	Sinornithomimus_dongi         1111111111111?01?1110(0 1)011201101110011111101??011
	Gallimimus_bullatus           11111111111110000111111(0 1)12(0 1)111111001111011110011
	Anserimimus_planinychus       ??????????????????111010021211011001111?111???11
	Struthiomimus_altus           1111001?11111101111101001?0111111011111(0 1)111???11
	Ornithomimus_edmontonicus     1111011?1111111111110001120211111011111111111111
	Qiupalong_henanensis          ??????????????????????????????????0?1???1?011101

;

END;
BEGIN TREES;
	Title Imported_trees;
	LINK Taxa = Taxa;
	TRANSLATE
		1 Allosaurus_fragilis,
		2 Tyrannosaurids,
		3 Pelecanimimus_polyodon,
		4 Harpymimus_okladnikovi,
		5 Shenzousaurus_orientalis,
		6 Beishanlong_grandis,
		7 Garudimimus_brevipes,
		8 Archaeornithomimus_asiaticus,
		9 Sinornithomimus_dongi,
		10 Gallimimus_bullatus,
		11 Anserimimus_planinychus,
		12 Struthiomimus_altus,
		13 Ornithomimus_edmontonicus,
		14 Qiupalong_henanensis;
	TREE Imported_tree_0 = (1,(2,(3,4,5,6,(7,(8,(9,((10,11),(14,(12,13)))))))));

END;


BEGIN ASSUMPTIONS;
	OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS;
	TYPESET * UNTITLED   =  unord:  1 -  48;

END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  'Mk1 (est.)':  1 -  48;
END;

Begin MESQUITE;
		MESQUITESCRIPTVERSION 2;
		TITLE AUTO;
		tell ProjectCoordinator;
		timeSaved 1342726502498;
		getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			setID 0 7813686745251175743;
		endTell;
		getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters;
		tell It;
			setID 0 3981495402622137259;
			mqVersion 275;
			checksumv 0 3 2045844443 null  getNumChars 48 numChars 48 getNumTaxa 14 numTaxa 14   short true   bits 7   states 7   sumSquaresStatesOnly 1412.0 sumSquares 1412.0 longCompressibleToShort false usingShortMatrix true   NumFiles 1 NumMatrices 1;
			mqVersion;
		endTell;
		getWindow;
		tell It;
			suppress;
			setResourcesState false false 148;
			setPopoutState 400;
			setExplanationSize 0;
			setAnnotationSize 0;
			setFontIncAnnot 0;
			setFontIncExp 0;
			setSize 700 464;
			setLocation 1112 220;
			setFont SanSerif;
			setFontSize 10;
			getToolPalette;
			tell It;
			endTell;
			desuppress;
		endTell;
		getEmployee  #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord;
		tell It;
			makeTreeWindow #7813686745251175743  #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker;
			tell It;
				suppressEPCResponse;
				setTreeSource  #mesquite.trees.StoredTrees.StoredTrees;
				tell It;
					setTreeBlock 1;
					toggleUseWeights off;
				endTell;
				setAssignedID 5943.1342726412770.6348950862946320318;
				getTreeWindow;
				tell It;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 552 397;
					setLocation 1112 220;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
						setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.interchange;
					endTell;
					setActive;
					getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator;
				tell It;
					suppress;
					setTreeDrawer  #mesquite.trees.SquareTree.SquareTree;
					tell It;
						setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard;
						tell It;
							branchLengthsToggle off;
							toggleScale on;
							toggleBroadScale off;
							toggleCenter on;
							toggleEven on;
						endTell;
						setEdgeWidth 6;
						orientUp;
						setCornerMode Right_Angle  50;
					endTell;
					setBackground White;
					setBranchColor Black;
					showNodeNumbers off;
					showBranchColors on;
					labelBranchLengths off;
					centerBrLenLabels on;
					showBrLensUnspecified on;
					showBrLenLabelsOnTerminals on;
					setBrLenLabelColor 0 0 255;
					setNumBrLenDecimals 6;
					desuppress;
					getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames;
					tell It;
						setColor Black;
						toggleColorPartition on;
						toggleShadePartition off;
						toggleShowFootnotes on;
						toggleNodeLabels on;
						toggleCenterNodeNames off;
						toggleShowNames on;
						namesAngle ?;
					endTell;
				endTell;
					setTreeNumber 1;
					setTree '(3,5,6,4,(7,(8,(9,((11,10),(14,(12,13)))))));';
					setDrawingSizeMode 0;
					toggleLegendFloat on;
					scale 0;
					toggleTextOnTree off;
					showWindow;
				endTell;
				desuppressEPCResponse;
				getEmployee #mesquite.trees.ColorBranches.ColorBranches;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.ornamental.BranchNotes.BranchNotes;
				tell It;
					setAlwaysOn off;
				endTell;
				getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition;
				tell It;
					colorByPartition off;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles;
				tell It;
					setOn on;
					setDigits 4;
					writeAsPercentage off;
					toggleCentred on;
					toggleHorizontal on;
					toggleWhiteEdges on;
					setFontSize 10;
					setOffset 0  0;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings;
				tell It;
					setOn on;
					toggleCentred on;
					toggleHorizontal on;
					setFontSize 10;
					setOffset 0  0;
				endTell;
				getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues;
				tell It;
					panelOpen false;
				endTell;
			endTell;
		endTell;
		endTell;
end;