#NEXUS [written Mon Aug 06 16:44:25 BST 2012 by Mesquite version 2.74 (build 550) at AlanPC/10.140.72.242] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=17; TAXLABELS Pseudofusicoccum_adansoniae_CBS_122054 Pseudofusicoccum_adansoniae_WAC_13299 Pseudofusicoccum_ardesiacum_CBS_122062 Pseudofusicoccum_ardesiacum_WAC_13294 Pseudofusicoccum_kimberleyense_CBS122061 Pseudofusicoccum_kimberleyense_WAC13293 Pseudofusicoccum_stromaticum_CMM_3971 Pseudofusicoccum_stromaticum_CMM_3978 Pseudofusicoccum_stromaticum_CMM_3967 Pseudofusicoccum_stromaticum_CMM_3964 Pseudofusicoccum_stromaticum_CMM_3961 Pseudofusicoccum_stromaticum_CMM_3965 Pseudofusicoccum_stromaticum_CMW_13434 Pseudofusicoccum_stromaticum_CMW_13435 Pseudofusicoccum_stromaticum_CMM_3953 Botryosphaeria_dothidea_CAP_288 Botryosphaeria_dothidea_CMW_8000 ; END; BEGIN CHARACTERS; TITLE Pseudofusicoccum_Character_Matrix; DIMENSIONS NCHAR=1175; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = ?; MATRIX Pseudofusicoccum_adansoniae_CBS_122054 -------------------------------------------ATCCGAG Pseudofusicoccum_adansoniae_WAC_13299 ---------------------------------------------CCGAG Pseudofusicoccum_ardesiacum_CBS_122062 -------------------------------------------ATCCGAG Pseudofusicoccum_ardesiacum_WAC_13294 ----------------------------------------------CGAG Pseudofusicoccum_kimberleyense_CBS122061 -------------------------------------------ATCCGAG Pseudofusicoccum_kimberleyense_WAC13293 ------------------------------------------------AG Pseudofusicoccum_stromaticum_CMM_3971 TCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAG Pseudofusicoccum_stromaticum_CMM_3978 TCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAG Pseudofusicoccum_stromaticum_CMM_3967 TCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAG Pseudofusicoccum_stromaticum_CMM_3964 -----TTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAG Pseudofusicoccum_stromaticum_CMM_3961 ------TATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAG Pseudofusicoccum_stromaticum_CMM_3965 -----TTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAG Pseudofusicoccum_stromaticum_CMW_13434 -------------------------------------------ATCCGAG Pseudofusicoccum_stromaticum_CMW_13435 -------------------------------------------ATCCGAG Pseudofusicoccum_stromaticum_CMM_3953 -----TTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAG Botryosphaeria_dothidea_CAP_288 -------------------------------------------TCCGTAG Botryosphaeria_dothidea_CMW_8000 -------------------------------------------------- Pseudofusicoccum_adansoniae_CBS_122054 GTCAACCTA-GGAAAATGAATTCAAAGGTTCGTCCGGCGAGCGGTCGTCC Pseudofusicoccum_adansoniae_WAC_13299 GTCAACCTA-GGAAAATGAATTCAAAGGTTCGTCCGGCGAGCGGTCGTCC Pseudofusicoccum_ardesiacum_CBS_122062 GTCAACCTA-GGAAAATGAATTCAAAGGTTCGTCCGGCGGGCGGTCGTCC Pseudofusicoccum_ardesiacum_WAC_13294 GTCAACCTA-GGAAAATGAATTCAAAGGTTCGTCCGGCGGGCGGTCGTCC Pseudofusicoccum_kimberleyense_CBS122061 GTCAACCTA-GGAAAATGAATTCAAAGGTTCGTCCGGCGAGCGGTCGTCC Pseudofusicoccum_kimberleyense_WAC13293 GTCAACCTA-GGAAAATGAATTCAAAGGTTCGTCCGGCGAGCGGTCGTCC Pseudofusicoccum_stromaticum_CMM_3971 GTCAACCTA-GGAAAATGAATTCAAAGGTTCGTCCGGCGAGCGGTCGTCC Pseudofusicoccum_stromaticum_CMM_3978 GTCAACCTA-GGAAAATGAATTCAAAGGTTCGTCCGGCGAGCGGTCGTCC Pseudofusicoccum_stromaticum_CMM_3967 GTCAACCTA-GGAAAATGAATTCAAAGGTTCGTCCGGCGAGCGGTCGTCC Pseudofusicoccum_stromaticum_CMM_3964 GTCAACCTA-GGAAAATGAATTCAAAGGTTCGTCCGGCGAGCGGTCGTCC Pseudofusicoccum_stromaticum_CMM_3961 GTCAACCTA-GGAAAATGAATTCAAAGGTTCGTCCGGCGAGCGGTCGTCC Pseudofusicoccum_stromaticum_CMM_3965 GTCAACCTA-GGAAAATGAATTCAAAGGTTCGTCCGGCGAGCGGTCGTCC Pseudofusicoccum_stromaticum_CMW_13434 GTCAACCTA-GGAAAATGAATTCAAAGGTTCGTCCGGCGAGCGGTCGTCC Pseudofusicoccum_stromaticum_CMW_13435 GTCAACCTA-GGAAAATGAATTCAAAGGTTCGTCCGGCGAGCGGTCGTCC Pseudofusicoccum_stromaticum_CMM_3953 GTCAACCTA-GGAAAATGAATTCAAAGGTTCGTCCGGCGAGCGGTCGTCC Botryosphaeria_dothidea_CAP_288 GTGAACCTGCGGAAGGATCATTACCGAGTTGATTCGG---GCTCCGGCCC Botryosphaeria_dothidea_CMW_8000 ----------GGAAGGATCATTACCGAGTTGATTCGG---GCTCCGGCCC Pseudofusicoccum_adansoniae_CBS_122054 CGTCCTCCAAAGCGAGGTGTTTTCTACTACGCT--TGAGGCAAGACGCCA Pseudofusicoccum_adansoniae_WAC_13299 CGTCCTCCAAAGCGAGGTGTTTTCTACTACGCT--TGAGGCAAGACGCCA Pseudofusicoccum_ardesiacum_CBS_122062 CGTCCTCCAAAGCGAGGTGTTTTCTACTACGCT--TGAGGCAAGACGCCA Pseudofusicoccum_ardesiacum_WAC_13294 CGTCCTCCAAAGCGAGGTGTTTTCTACTACGCT--TGAGGCAAGACGCCA Pseudofusicoccum_kimberleyense_CBS122061 CGTCCTCCAAAGCGAGGTGTTTTCTACTACGCT--TGAGGCAAGACGCCA Pseudofusicoccum_kimberleyense_WAC13293 CGTCCTCCAAAGCGAGGTGTTTTCTACTACGCT--TGAGGCAAGACGCCA Pseudofusicoccum_stromaticum_CMM_3971 CGTCCTCCAAAGCGAGGTGTTTTCTACTACGCT--TGAGGCAAGACGCCA Pseudofusicoccum_stromaticum_CMM_3978 CGTCCTCCAAAGCGAGGTGTTTTCTACTACGCT--TGAGGCAAGACGCCA Pseudofusicoccum_stromaticum_CMM_3967 CGTCCTCCAAAGCGAGGTGTTTTCTACTACGCT--TGAGGCAAGACGCCA Pseudofusicoccum_stromaticum_CMM_3964 CGTCCTCCAAAGCGAGGTGTTTTCTACTACGCT--TGAGGCAAGACGCCA Pseudofusicoccum_stromaticum_CMM_3961 CGTCCTCCAAAGCGAGGTGTTTTCTACTACGCT--TGAGGCAAGACGCCA Pseudofusicoccum_stromaticum_CMM_3965 CGTCCTCCAAAGCGAGGTGTTTTCTACTACGCT--TGAGGCAAGACGCCA Pseudofusicoccum_stromaticum_CMW_13434 CGTCCTCCAAAGCGAGGTGTTTTCTACTACGCT--TGAGGCAAGACGCCA Pseudofusicoccum_stromaticum_CMW_13435 CGTCCTCCAAAGCGAGGTGTTTTCTACTACGCT--TGAGGCAAGACGCCA Pseudofusicoccum_stromaticum_CMM_3953 CGTCCTCCAAAGCGAGGTGTTTTCTACTACGCT--TGAGGCAAGACGCCA Botryosphaeria_dothidea_CAP_288 GATCCTCCCACCCTTTGTGTACCTACCTCTGTTGCTTTGGCGGGCCGCGG Botryosphaeria_dothidea_CMW_8000 GATCCTCCCACCCTTTGTGTACCTACCTCTGTTGCTTTGGCGGGCCGCGG Pseudofusicoccum_adansoniae_CBS_122054 -CCGCCGAGGTCTTTGAGGCGCGTCCGAGAGGACGCTGCCCAACACCAAG Pseudofusicoccum_adansoniae_WAC_13299 -CCGCCGAGGTCTTTGAGGCGCGTCCGAGAGGACGCTGCCCAACACCAAG Pseudofusicoccum_ardesiacum_CBS_122062 -CCGCCGAGGTCTTTGAGGCGCGTCCGAGAGGACGCTGCCCAATACCAAG Pseudofusicoccum_ardesiacum_WAC_13294 -CCGCCGAGGTCTTTGAGGCGCGTCCGAGAGGACGCTGCCCAATACCAAG Pseudofusicoccum_kimberleyense_CBS122061 -CCGCCGAGGTCTTTGAGGCGCGTCCGAGAGGACGCTGCCCAATACCAAG Pseudofusicoccum_kimberleyense_WAC13293 -CCGCCGAGGTCTTTGAGGCGCGTCCGAGAGGACGCTGCCCAATACCAAG Pseudofusicoccum_stromaticum_CMM_3971 -CCGCCGAGGTCTTTGAGGCGCGTCCGGGAGGACGCCGCCCAACACCAAG Pseudofusicoccum_stromaticum_CMM_3978 -CCGCCGAGGTCTTTGAGGCGCGTCCGGGAGGACGCCGCCCAACACCAAG Pseudofusicoccum_stromaticum_CMM_3967 -CCGCCGAGGTCTTTGAGGCGCGTCCGGGAGGACGCCGCCCAACACCAAG Pseudofusicoccum_stromaticum_CMM_3964 -CCGCCGAGGTCTTTGAGGCGCGTCCGGGAGGACGCCGCCCAACACCAAG Pseudofusicoccum_stromaticum_CMM_3961 -CCGCCGAGGTCTTTGAGGCGCGTCCGGGAGGACGCCGCCCAACACCAAG Pseudofusicoccum_stromaticum_CMM_3965 -CCGCCGAGGTCTTTGAGGCGCGTCCGGGAGGACGCCGCCCAACACCAAG Pseudofusicoccum_stromaticum_CMW_13434 -CCGCCGAGGTCTTTGAGGCGCGTCCGGGAGGACGCCGCCCAACACCAAG Pseudofusicoccum_stromaticum_CMW_13435 -CCGCCGAGGTCTTTGAGGCGCGTCCGGGAGGACGCCGCCCAACACCAAG Pseudofusicoccum_stromaticum_CMM_3953 -CCGCCGAGGTCTTTGAGGCGCGTCCGGGAGGACGCCGCCCAACACCAAG Botryosphaeria_dothidea_CAP_288 TCCTCCGCGGCC-----GGCCCCCCTCCCCGGGGGGTGGCCAGCGCCCGC Botryosphaeria_dothidea_CMW_8000 TCCTCCGCGGCC-----GGCCCCCCTCCCCGGGGGGTGGCCAGCGCCCGC Pseudofusicoccum_adansoniae_CBS_122054 CAGAGCTTGAGGGGTGTAATGACGCTCGAACAGGCATGCCCTTCGGAATA Pseudofusicoccum_adansoniae_WAC_13299 CAGAGCTTGAGGGGTGTAATGACGCTCGAACAGGCATGCCCTTCGGAATA Pseudofusicoccum_ardesiacum_CBS_122062 CAGAGCTTGAGGGGTGTAATGACGCTCGAACAGGCATGCCCTTCGGAATA Pseudofusicoccum_ardesiacum_WAC_13294 CAGAGCTTGAGGGGTGTAATGACGCTCGAACAGGCATGCCCTTCGGAATA Pseudofusicoccum_kimberleyense_CBS122061 CAGAGCTTGAGGGGTGTAATGACGCTCGAACAGGCATGCCCTTCGGAATA Pseudofusicoccum_kimberleyense_WAC13293 CAGAGCTTGAGGGGTGTAATGACGCTCGAACAGGCATGCCCTTCGGAATA Pseudofusicoccum_stromaticum_CMM_3971 CAGAGCTTGAGGGGTGTAATGACGCTCGAACAGGCATGCCCTTCGGAATA Pseudofusicoccum_stromaticum_CMM_3978 CAGAGCTTGAGGGGTGTAATGACGCTCGAACAGGCATGCCCTTCGGAATA Pseudofusicoccum_stromaticum_CMM_3967 CAGAGCTTGAGGGGTGTAATGACGCTCGAACAGGCATGCCCTTCGGAATA Pseudofusicoccum_stromaticum_CMM_3964 CAGAGCTTGAGGGGTGTAATGACGCTCGAACAGGCATGCCCTTCGGAATA Pseudofusicoccum_stromaticum_CMM_3961 CAGAGCTTGAGGGGTGTAATGACGCTCGAACAGGCATGCCCTTCGGAATA Pseudofusicoccum_stromaticum_CMM_3965 CAGAGCTTGAGGGGTGTAATGACGCTCGAACAGGCATGCCCTTCGGAATA Pseudofusicoccum_stromaticum_CMW_13434 CAGAGCTTGAGGGGTGTAATGACGCTCGAACAGGCATGCCCTTCGGAATA Pseudofusicoccum_stromaticum_CMW_13435 CAGAGCTTGAGGGGTGTAATGACGCTCGAACAGGCATGCCCTTCGGAATA Pseudofusicoccum_stromaticum_CMM_3953 CAGAGCTTGAGGGGTGTAATGACGCTCGAACAGGCATGCCCTTCGGAATA Botryosphaeria_dothidea_CAP_288 CAGAGGACCATCAAACTCCAGTCAGTAAACGATGCAGTCTGAAAAACATT Botryosphaeria_dothidea_CMW_8000 CAGAGGACCATCAAACTCCAGTCAGTAAACGATGCAGTCTGAAAAACATT Pseudofusicoccum_adansoniae_CBS_122054 CCAAAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGC Pseudofusicoccum_adansoniae_WAC_13299 CCAAAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGC Pseudofusicoccum_ardesiacum_CBS_122062 CCAAAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGC Pseudofusicoccum_ardesiacum_WAC_13294 CCAAAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGC Pseudofusicoccum_kimberleyense_CBS122061 CCAAAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGC Pseudofusicoccum_kimberleyense_WAC13293 CCAAAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGC Pseudofusicoccum_stromaticum_CMM_3971 CCAAAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGC Pseudofusicoccum_stromaticum_CMM_3978 CCAAAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGC Pseudofusicoccum_stromaticum_CMM_3967 CCAAAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGC Pseudofusicoccum_stromaticum_CMM_3964 CCAAAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGC Pseudofusicoccum_stromaticum_CMM_3961 CCAAAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGC Pseudofusicoccum_stromaticum_CMM_3965 CCAAAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGC Pseudofusicoccum_stromaticum_CMW_13434 CCAAAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGC Pseudofusicoccum_stromaticum_CMW_13435 CCAAAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGC Pseudofusicoccum_stromaticum_CMM_3953 CCAAAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGC Botryosphaeria_dothidea_CAP_288 TAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTC--TGGCATCGAT Botryosphaeria_dothidea_CMW_8000 TAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTC--TGGCATCGAT Pseudofusicoccum_adansoniae_CBS_122054 AATTCACATTACTTATCGCATTTCGCTGCGTTCTTCATCGATGCCAG--A Pseudofusicoccum_adansoniae_WAC_13299 AATTCACATTACTTATCGCATTTCGCTGCGTTCTTCATCGATGCCAG--A Pseudofusicoccum_ardesiacum_CBS_122062 AATTCACATTACTTATCGCATTTCGCTGCGTTCTTCATCGATGCCAG--A Pseudofusicoccum_ardesiacum_WAC_13294 AATTCACATTACTTATCGCATTTCGCTGCGTTCTTCATCGATGCCAG--A Pseudofusicoccum_kimberleyense_CBS122061 AATTCACATTACTTATCGCATTTCGCTGCGTTCTTCATCGATGCCAG--A Pseudofusicoccum_kimberleyense_WAC13293 AATTCACATTACTTATCGCATTTCGCTGCGTTCTTCATCGATGCCAG--A Pseudofusicoccum_stromaticum_CMM_3971 AATTCACATTACTTATCGCATTTCGCTGCGTTCTTCATCGATGCCAG--A Pseudofusicoccum_stromaticum_CMM_3978 AATTCACATTACTTATCGCATTTCGCTGCGTTCTTCATCGATGCCAG--A Pseudofusicoccum_stromaticum_CMM_3967 AATTCACATTACTTATCGCATTTCGCTGCGTTCTTCATCGATGCCAG--A Pseudofusicoccum_stromaticum_CMM_3964 AATTCACATTACTTATCGCATTTCGCTGCGTTCTTCATCGATGCCAG--A Pseudofusicoccum_stromaticum_CMM_3961 AATTCACATTACTTATCGCATTTCGCTGCGTTCTTCATCGATGCCAG--A Pseudofusicoccum_stromaticum_CMM_3965 AATTCACATTACTTATCGCATTTCGCTGCGTTCTTCATCGATGCCAG--A Pseudofusicoccum_stromaticum_CMW_13434 AATTCACATTACTTATCGCATTTCGCTGCGTTCTTCATCGATGCCAG--A Pseudofusicoccum_stromaticum_CMW_13435 AATTCACATTACTTATCGCATTTCGCTGCGTTCTTCATCGATGCCAG--A Pseudofusicoccum_stromaticum_CMM_3953 AATTCACATTACTTATCGCATTTCGCTGCGTTCTTCATCGATGCCAG--A Botryosphaeria_dothidea_CAP_288 GAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGA Botryosphaeria_dothidea_CMW_8000 GAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGA Pseudofusicoccum_adansoniae_CBS_122054 ACCAAGAGATCCGTTGTTGAAAGTTTTAGTTTATTGAATTTATATCAGAC Pseudofusicoccum_adansoniae_WAC_13299 ACCAAGAGATCCGTTGTTGAAAGTTTTAGTTTATTGAATTTATATCAGAC Pseudofusicoccum_ardesiacum_CBS_122062 ACCAAGAGATCCGTTGTTGAAAGTTTTAGTTTATTGAATTTATATCAGAC Pseudofusicoccum_ardesiacum_WAC_13294 ACCAAGAGATCCGTTGTTGAAAGTTTTAGTTTATTGAATTTATATCAGAC Pseudofusicoccum_kimberleyense_CBS122061 ACCAAGAGATCCGTTGTTGAAAGTTTTAGTTTATTGAATTTATATCAGAC Pseudofusicoccum_kimberleyense_WAC13293 ACCAAGAGATCCGTTGTTGAAAGTTTTAGTTTATTGAATTTATATCAGAC Pseudofusicoccum_stromaticum_CMM_3971 ACCAAGAGATCCGTTGTTGAAAGTTTTAGTTTATTGAATTTAAATCAGAC Pseudofusicoccum_stromaticum_CMM_3978 ACCAAGAGATCCGTTGTTGAAAGTTTTAGTTTATTGAATTTAAATCAGAC Pseudofusicoccum_stromaticum_CMM_3967 ACCAAGAGATCCGTTGTTGAAAGTTTTAGTTTATTGAATTTAAATCAGAC Pseudofusicoccum_stromaticum_CMM_3964 ACCAAGAGATCCGTTGTTGAAAGTTTTAGTTTATTGAATTTAAATCAGAC Pseudofusicoccum_stromaticum_CMM_3961 ACCAAGAGATCCGTTGTTGAAAGTTTTAGTTTATTGAATTTAAATCAGAC Pseudofusicoccum_stromaticum_CMM_3965 ACCAAGAGATCCGTTGTTGAAAGTTTTAGTTTATTGAATTTAAATCAGAC Pseudofusicoccum_stromaticum_CMW_13434 ACCAAGAGATCCGTTGTTGAAAGTTTTAGTTTATTGAATTTAAATCAGAC Pseudofusicoccum_stromaticum_CMW_13435 ACCAAGAGATCCGTTGTTGAAAGTTTTAGTTTATTGAATTTAAATCAGAC Pseudofusicoccum_stromaticum_CMM_3953 ACCAAGAGATCCGTTGTTGAAAGTTTTAGTTTATTGAATTTAAATCAGAC Botryosphaeria_dothidea_CAP_288 ATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCA Botryosphaeria_dothidea_CMW_8000 ATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCA Pseudofusicoccum_adansoniae_CBS_122054 AGCAAAGTTCACTGACTGGAGTTTTGTGGTCCTCTGGCGGGCGCGGGCCA Pseudofusicoccum_adansoniae_WAC_13299 AGCAAAGTTCACTGACTGGAGTTTTGTGGTCCTCTGGCGGGCGCGGGCCA Pseudofusicoccum_ardesiacum_CBS_122062 AGCAAAGTTCACTGACTGGAGTTTTGTGGTCCTCTGGCGGGCGCAGGCCA Pseudofusicoccum_ardesiacum_WAC_13294 AGCAAAGTTCACTGACTGGAGTTTTGTGGTCCTCTGGCGGGCGCAGGCCA Pseudofusicoccum_kimberleyense_CBS122061 AGCAAAGTTCACTGACTGGAGTTTTGTGGTCCTCTGGCGGGCGCAGGCCA Pseudofusicoccum_kimberleyense_WAC13293 AGCAAAGTTCACTGACTGGAGTTTTGTGGCCCTCTGGCGGGCGCAGGCCA Pseudofusicoccum_stromaticum_CMM_3971 AGCAAAGTTCACTGACTGGAGTTTTGTGGTCCTCTGGCGGGCGCAGGCCA Pseudofusicoccum_stromaticum_CMM_3978 AGCAAAGTTCACTGACTGGAGTTTTGTGGTCCTCTGGCGGGCGCAGGCCA Pseudofusicoccum_stromaticum_CMM_3967 AGCAAAGTTCACTGACTGGAGTTTTGTGGTCCTCTGGCGGGCGCAGGCCA Pseudofusicoccum_stromaticum_CMM_3964 AGCAAAGTTCACTGACTGGAGTTTTGTGGTCCTCTGGCGGGCGCAGGCCA Pseudofusicoccum_stromaticum_CMM_3961 AGCAAAGTTCACTGACTGGAGTTTTGTGGTCCTCTGGCGGGCGCAGGCCA Pseudofusicoccum_stromaticum_CMM_3965 AGCAAAGTTCACTGACTGGAGTTTTGTGGTCCTCTGGCGGGCGCAGGCCA Pseudofusicoccum_stromaticum_CMW_13434 AGCAAAGTTCACTGACTGGAGTTTTGTGGTCCTCTGGCGGGCGCAGGCCA Pseudofusicoccum_stromaticum_CMW_13435 AGCAAAGTTCACTGACTGGAGTTTTGTGGTCCTCTGGCGGGCGCAGGCCA Pseudofusicoccum_stromaticum_CMM_3953 AGCAAAGTTCACTGACTGGAGTTTTGTGGTCCTCTGGCGGGCGCAGGCCA Botryosphaeria_dothidea_CAP_288 TGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCA Botryosphaeria_dothidea_CMW_8000 TGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCA Pseudofusicoccum_adansoniae_CBS_122054 GCCCCGATCAGGGGGCCGGCCGCGGAGAACC--------GCGGCCCGCCA Pseudofusicoccum_adansoniae_WAC_13299 GCCCCGATCAGGGGGCCGGCCGCGGAGAACC--------GCGGCCCGCCA Pseudofusicoccum_ardesiacum_CBS_122062 GCCCCGGCTAGGGGGCCGGCCGCGGAGAACC--------GCGGCCCGCCA Pseudofusicoccum_ardesiacum_WAC_13294 GCCCCGGCTAGGGGGCCGGCCGCGGAGAACC--------GCGGCCCGCCA Pseudofusicoccum_kimberleyense_CBS122061 GCCCCGGCTAGGGGGCCGGCCGCGGAGAACC--------GCGGCCCGCCA Pseudofusicoccum_kimberleyense_WAC13293 GCCCCGGCTAGGGGGCCGGCCGCGGAGAACC--------GCGGCCCGCCA Pseudofusicoccum_stromaticum_CMM_3971 GCCCCGGTCAAGGGGCCGGCCGCGGAGAACC--------GCGGCCCGCCA Pseudofusicoccum_stromaticum_CMM_3978 GCCCCGGTCAAGGGGCCGGCCGCGGAGAACC--------GCGGCCCGCCA Pseudofusicoccum_stromaticum_CMM_3967 GCCCCGGTCAAGGGGCCGGCCGCGGAGAACC--------GCGGCCCGCCA Pseudofusicoccum_stromaticum_CMM_3964 GCCCCGGTCAAGGGGCCGGCCGCGGAGAACC--------GCGGCCCGCCA Pseudofusicoccum_stromaticum_CMM_3961 GCCCCGGTCAAGGGGCCGGCCGCGGAGAACC--------GCGGCCCGCCA Pseudofusicoccum_stromaticum_CMM_3965 GCCCCGGTCAAGGGGCCGGCCGCGGAGAACC--------GCGGCCCGCCA Pseudofusicoccum_stromaticum_CMW_13434 GCCCCGGTCAAGGGGCCGGCCGCGGAGAACC--------GCGGCCCGCCA Pseudofusicoccum_stromaticum_CMW_13435 GCCCCGGTCAAGGGGCCGGCCGCGGAGAACC--------GCGGCCCGCCA Pseudofusicoccum_stromaticum_CMM_3953 GCCCCGGTCAAGGGGCCGGCCGCGGAGAACC--------GCGGCCCGCCA Botryosphaeria_dothidea_CAP_288 -CCGTCCTTTGCGGGCGCGCCTCAAAGACCTCGGCGGTGGCGTCTTGCCT Botryosphaeria_dothidea_CMW_8000 -CCGTCCTTTGCGGGCGCGCCTCAAAGACCTCGGCGGTGGCGTCTTGCCT Pseudofusicoccum_adansoniae_CBS_122054 AAGCAACAGAGGTAGGTACACAAAGGGTTGGAGAGTGGG------CTCGG Pseudofusicoccum_adansoniae_WAC_13299 AAGCAACAGAGGTAGGTACACAAAGGGTTGGAGAGTGGG------CTCGG Pseudofusicoccum_ardesiacum_CBS_122062 AAGCAACAGAGGTAGGTACACAAAGGGTTGGAGAGTGGG------CTCGG Pseudofusicoccum_ardesiacum_WAC_13294 AAGCAACAGAGGTAGGTACACAAAGGGTTGGAGAGTGGG------CTCGG Pseudofusicoccum_kimberleyense_CBS122061 AAGCAACAGAGGTAGGTACACAAAGGGTTGGAGAGTGGG------CTCGG Pseudofusicoccum_kimberleyense_WAC13293 AAGCAACAGAGGTAGGTACACAAAGGGTTGGAGAGTGGG------CTCGG Pseudofusicoccum_stromaticum_CMM_3971 AAGCAACAGAGGTAGGTACACAAAGGGTTGGAGAGTGGG------CTCGA Pseudofusicoccum_stromaticum_CMM_3978 AAGCAACAGAGGTAGGTACACAAAGGGTTGGAGAGTGGG------CTCGA Pseudofusicoccum_stromaticum_CMM_3967 AAGCAACAGAGGTAGGTACACAAAGGGTTGGAGAGTGGG------CTCGA Pseudofusicoccum_stromaticum_CMM_3964 AAGCAACAGAGGTAGGTACACAAAGGGTTGGAGAGTGGG------CTCGA Pseudofusicoccum_stromaticum_CMM_3961 AAGCAACAGAGGTAGGTACACAAAGGGTTGGAGAGTGGG------CTCGA Pseudofusicoccum_stromaticum_CMM_3965 AAGCAACAGAGGTAGGTACACAAAGGGTTGGAGAGTGGG------CTCGA Pseudofusicoccum_stromaticum_CMW_13434 AAGCAACAGAGGTAGGTACACAAAGGGTTGGAGAGTGGG------CTCGA Pseudofusicoccum_stromaticum_CMW_13435 AAGCAACAGAGGTAGGTACACAAAGGGTTGGAGAGTGGG------CTCGA Pseudofusicoccum_stromaticum_CMM_3953 AAGCAACAGAGGTAGGTACACAAAGGGTTGGAGAGTGGG------CTCGA Botryosphaeria_dothidea_CAP_288 CAAGCGTAGTAGAACATACATCTCGCTTCGGAGCGCAGGGCGTCGCCCGC Botryosphaeria_dothidea_CMW_8000 CAAGCGTAGTAGAACATACATCTCGCTTCGGAGCGCAGGGCGTCGCCCGC Pseudofusicoccum_adansoniae_CBS_122054 TGAAGAGACCC---AAAACTCGGTAATGATCCTTCC???G---------- Pseudofusicoccum_adansoniae_WAC_13299 TGAAGAGACCC---AAAACTCGGTAATGATCCTTCC???G---------- Pseudofusicoccum_ardesiacum_CBS_122062 TGAAGAGACCC---AAAACTCGGTAATGATCCTTCC???G---------- Pseudofusicoccum_ardesiacum_WAC_13294 TGAAGAGACCC---AAAACTCGGTAATGATCCTTCC???G---------- Pseudofusicoccum_kimberleyense_CBS122061 TGAAGAGACCC---AAAACTCGGTAATGATCCTTCC???G---------- Pseudofusicoccum_kimberleyense_WAC13293 TGAAGAGACCC---AAAACTCGGTAATGATCCTTCC???G---------- Pseudofusicoccum_stromaticum_CMM_3971 TGAGGAGACCC---AAAACTCGGTAATGATCCTTCCGCAGG???TA---- Pseudofusicoccum_stromaticum_CMM_3978 TGAGGAGACCC---AAAACTCGGTAATGATCCTTCCGCAGG???------ Pseudofusicoccum_stromaticum_CMM_3967 TGAGGAGACCC---AAAACTCGGTAATGATCCTTCCGCAG???C------ Pseudofusicoccum_stromaticum_CMM_3964 TGAGGAGACCC---AAAACTCGGTAATGATCCTTCCGCAGG???------ Pseudofusicoccum_stromaticum_CMM_3961 TGAGGAGACCC---AAAACTCGGTAATGATCCTTCCGCAGGTT???TCGG Pseudofusicoccum_stromaticum_CMM_3965 TGAGGAGACCC---AAAACTCGGTAATGATCCTTCCGCAGGT???A---- Pseudofusicoccum_stromaticum_CMW_13434 TGAGGAGACCC---AAAACTCGGTAATGATCCTTCC???G---------- Pseudofusicoccum_stromaticum_CMW_13435 TGAGGAGACCC---AAAACTCGGTAATGATCCTTCC???G---------- Pseudofusicoccum_stromaticum_CMM_3953 TGAGGAGACCC---AAAACTCGGTAATGATCCTTCCGCAGGTT???---- Botryosphaeria_dothidea_CAP_288 CGGACGAACCTTCTGAACTTTTCTCAAGGTTGACCTCGGATCAGGTAGGG Botryosphaeria_dothidea_CMW_8000 CGGACGAACCTTCTGAACTTTTCTCAAGGTTGACCTCGGAT???G----- Pseudofusicoccum_adansoniae_CBS_122054 -----------------------------------------------AAG Pseudofusicoccum_adansoniae_WAC_13299 -----------------------------------------------AAG Pseudofusicoccum_ardesiacum_CBS_122062 -----------------------------------------------AAG Pseudofusicoccum_ardesiacum_WAC_13294 -----------------------------------------------AAG Pseudofusicoccum_kimberleyense_CBS122061 -----------------------------------------------AAG Pseudofusicoccum_kimberleyense_WAC13293 -----------------------------------------------AAG Pseudofusicoccum_stromaticum_CMM_3971 -------------CAAGTGCGGTGGTATCGACAAGCGTACCATCGAGAAG Pseudofusicoccum_stromaticum_CMM_3978 -------------CAAGTGCGGTGGTATCGACAAGCGTACCATCGAGAAG Pseudofusicoccum_stromaticum_CMM_3967 --------------AAGTGCGGTGGTATCGACAAGCGTACCATCGAGAAG Pseudofusicoccum_stromaticum_CMM_3964 --------------AAGTGCGGTGGTATCGACAAGCGTACCATCGAGAAG Pseudofusicoccum_stromaticum_CMM_3961 TCACTTG-ATCTACAAGTGCGGTGGTATCGACAAGCGTACCATCGAGAAG Pseudofusicoccum_stromaticum_CMM_3965 ---------------AGTGCGGTGGTATCGACAAGCGTACCATCGAGAAG Pseudofusicoccum_stromaticum_CMW_13434 -----------------------------------------------AAG Pseudofusicoccum_stromaticum_CMW_13435 -----------------------------------------------AAG Pseudofusicoccum_stromaticum_CMM_3953 --------ATCTACAAGTGCGGTGGTATCGACAAGCGTACCATCGAGAAG Botryosphaeria_dothidea_CAP_288 ATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA???CATCGAGAAG Botryosphaeria_dothidea_CMW_8000 -----------------------------------------------AAG Pseudofusicoccum_adansoniae_CBS_122054 TTCGAGAAGGTGAGCCAGACTTTT---TGCCCGACGCCACCCGTGTGCAT Pseudofusicoccum_adansoniae_WAC_13299 TTCGAGAAGGTGAGCCAGACTTTT---TGCCCGACGCCACCCGTGTGCAT Pseudofusicoccum_ardesiacum_CBS_122062 TTCGAGAAGGTGAGCCAGACTTTTTTTTGCCCGACGCCACCCATGTGCAG Pseudofusicoccum_ardesiacum_WAC_13294 TTCGAGAAGGTGAGCCAGACTTTTTTTTGCCCGACGCCACCCATGTGCAG Pseudofusicoccum_kimberleyense_CBS122061 TTCGAGAAGGTGAGCCAGACTTTTTTTTGCCCGACGCCACCCATGTGCAG Pseudofusicoccum_kimberleyense_WAC13293 TTCGAGAAGGTGAGCCAGACTTTTTTTTGCCCGACGCCACCCATGTGCAG Pseudofusicoccum_stromaticum_CMM_3971 TTCGAGAAGGTGAGCCAGACTTTTT--TTGCCGACACCACCCATGTGCAG Pseudofusicoccum_stromaticum_CMM_3978 TTCGAGAAGGTGAGCCAGACTTTTT--TTGCCGACACCACCCATGTGCAG Pseudofusicoccum_stromaticum_CMM_3967 TTCGAGAAGGTGAGCCAGACTTTTT--TTGCCGACACCACCCATGTGCAG Pseudofusicoccum_stromaticum_CMM_3964 TTCGAGAAGGTGAGCCAGACTTTTT--TTGCCGACACCACCCATGTGCAG Pseudofusicoccum_stromaticum_CMM_3961 TTCGAGAAGGTGAGCCAGACTTTTT--TTGCCGACACCACCCATGTGCAG Pseudofusicoccum_stromaticum_CMM_3965 TTCGAGAAGGTGAGCCAGACTTTTT--TTGCCGACACCACCCATGTGCAG Pseudofusicoccum_stromaticum_CMW_13434 TTCGAGAAGGTGAGCCAGACTTTTT--TTGCCGACACCACCCATGTGCAG Pseudofusicoccum_stromaticum_CMW_13435 TTCGAGAAGGTGAGCCAGACTTTTT--TTGCCGACACCACCCATGTGCAG Pseudofusicoccum_stromaticum_CMM_3953 TTCGAGAAGGTGAGCCAGACTTTTT--TTGCCGACACCACCCATGTGCAG Botryosphaeria_dothidea_CAP_288 TTCGAGAAGGTAAGC-ACGCATTTT-----CTGTGCCTGCACGTGTGCTG Botryosphaeria_dothidea_CMW_8000 TTCGAGAAGGTAAGC-ACACATTTT-----CTGTGCCTGCACGTGTGCTG Pseudofusicoccum_adansoniae_CBS_122054 CGGTCTCGCTGCACGCAATTTTGGCCGCGTTTGCCT-ATCACTC-GATGA Pseudofusicoccum_adansoniae_WAC_13299 CGGTCTCGCTGCACGCAATTTTGGCCGCGTTTGCCT-ATCACTC-GATGA Pseudofusicoccum_ardesiacum_CBS_122062 CGATCTCGCTGCACGCAATTCTGGCCGGATTTGCCT-ATCACTC-GATGA Pseudofusicoccum_ardesiacum_WAC_13294 CGATCTCGCTGCACGCAATTCTGGCCGGATTTGCCT-ATCACTC-GATGA Pseudofusicoccum_kimberleyense_CBS122061 CGATCTCGCTGCATGCAATTCTGGCCGGATTTGCCT-ATCACTC-GATGA Pseudofusicoccum_kimberleyense_WAC13293 CGATCTCGCTGCATGCAATTCTGGCCGGATTTGCCT-ATCACTC-GATGA Pseudofusicoccum_stromaticum_CMM_3971 CGATCTCGCTGCACGCAATCCTGGCCGGATTTGCCT-ATCACTC-GATGA Pseudofusicoccum_stromaticum_CMM_3978 CGATCTCGCTGCACGCAATCCTGGCCGGATTTGCCT-ATCACTC-GATGA Pseudofusicoccum_stromaticum_CMM_3967 CGATCTCGCTGCACGCAATCCTGGCCGGATTTGCCT-ATCACTC-GATGA Pseudofusicoccum_stromaticum_CMM_3964 CGATCTCGCTGCACGCAATCCTGGCCGGATTTGCCT-ATCACTC-GATGA Pseudofusicoccum_stromaticum_CMM_3961 CGATCTCGCTGCACGCAATCCTGGCCGGATTTGCCT-ATCACTC-GATGA Pseudofusicoccum_stromaticum_CMM_3965 CGATCTCGCTGCACGCAATCCTGGCCGGATTTGCCT-ATCACTC-GATGA Pseudofusicoccum_stromaticum_CMW_13434 CGATCTCGCTGCACGCAATCCTGGCCGGATTTGCCT-ATCACTC-GATGA Pseudofusicoccum_stromaticum_CMW_13435 CGATCTCGCTGCACGCAATCCTGGCCGGATTTGCCT-ATCACTC-GATGA Pseudofusicoccum_stromaticum_CMM_3953 CGATCTCGCTGCACGCAATCCTGGCCGGATTTGCCT-ATCACTC-GATGA Botryosphaeria_dothidea_CAP_288 GGTTCCTGC--------------GCCGAATTTGCCTTATCACTCTGGTGA Botryosphaeria_dothidea_CMW_8000 GGTTCCTGC--------------GCCGAATTTGCCTTATCACTCTGGTGA Pseudofusicoccum_adansoniae_CBS_122054 GGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGCTC Pseudofusicoccum_adansoniae_WAC_13299 GGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGCTC Pseudofusicoccum_ardesiacum_CBS_122062 GGGGCATTTTCGTGGTGGGGTTGGTCTGCGCTAGGCCGCGTCGGTCGCTC Pseudofusicoccum_ardesiacum_WAC_13294 GGGGCATTTTCGTGGTGGGGTTGGTCTGCGCTAGGCCGCGTCGGTCGCTC Pseudofusicoccum_kimberleyense_CBS122061 GGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGCTC Pseudofusicoccum_kimberleyense_WAC13293 GGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGCTC Pseudofusicoccum_stromaticum_CMM_3971 GGGGCATTTTCGTGGTGGGGTTGGTCGGCGCTAGGCCGCGTCGGTCGTTC Pseudofusicoccum_stromaticum_CMM_3978 GGGGCATTTTCGTGGTGGGGTTGGTCGGCGCTAGGCCGCGTCGGTCGTTC Pseudofusicoccum_stromaticum_CMM_3967 GGGGCATTTTCGTGGTGGGGTTGGTCGGCGCTAGGCCGCGTCGGTCGTTC Pseudofusicoccum_stromaticum_CMM_3964 GGGGCATTTTCGTGGTGGGGTTGGTCGGCGCTAGGCCGCGTCGGTCGTTC Pseudofusicoccum_stromaticum_CMM_3961 GGGGCATTTTCGTGGTGGGGTTGGTCGGCGCTAGGCCGCGTCGGTCGTTC Pseudofusicoccum_stromaticum_CMM_3965 GGGGCATTTTCGTGGTGGGGTTGGTCGGCGCTAGGCCGCGTCGGTCGTTC Pseudofusicoccum_stromaticum_CMW_13434 GGGGCATTTTCGTGGTGGGGTTGGTCGGCGCTAGGCCGCGTCGGTCGTTC Pseudofusicoccum_stromaticum_CMW_13435 GGGGCATTTTCGTGGTGGGGTTGGTCGGCGCTAGGCCGCGTCGGTCGTTC Pseudofusicoccum_stromaticum_CMM_3953 GGGGCATTTTCGTGGTGGGGTTGGTCGGCGCTAGGCCGCGTCGGTCGTTC Botryosphaeria_dothidea_CAP_288 GGGGCAATTTCTTGGTGGGGCTGGCCCGCGCTAAGCCTCGTTTGGTCTTC Botryosphaeria_dothidea_CMW_8000 GGGGCAATTTCTTGGTGGGGCTGGCCCGCGCTAAGCCTCGTTTGGTCTTC Pseudofusicoccum_adansoniae_CBS_122054 GGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGT Pseudofusicoccum_adansoniae_WAC_13299 GGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGT Pseudofusicoccum_ardesiacum_CBS_122062 GGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGT Pseudofusicoccum_ardesiacum_WAC_13294 GGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGT Pseudofusicoccum_kimberleyense_CBS122061 GGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGT Pseudofusicoccum_kimberleyense_WAC13293 GGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGT Pseudofusicoccum_stromaticum_CMM_3971 GGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGT Pseudofusicoccum_stromaticum_CMM_3978 GGCAAAATGCCCGTTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGT Pseudofusicoccum_stromaticum_CMM_3967 GGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGT Pseudofusicoccum_stromaticum_CMM_3964 GGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGT Pseudofusicoccum_stromaticum_CMM_3961 GGCAAAATGCCCGTTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGT Pseudofusicoccum_stromaticum_CMM_3965 GGCAAAATGCCCGTTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGT Pseudofusicoccum_stromaticum_CMW_13434 GGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGT Pseudofusicoccum_stromaticum_CMW_13435 GGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGT Pseudofusicoccum_stromaticum_CMM_3953 GGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGT Botryosphaeria_dothidea_CAP_288 GGCAAAATCTCCGCATCTGGATTTTTTGTGACCGGCGTGCGACCGA---- Botryosphaeria_dothidea_CMW_8000 GGCAAAATCTCCGCATCTGGATTTTTTGTGACCGGCGTGCGACCGA---- Pseudofusicoccum_adansoniae_CBS_122054 GCATGGTGCACGACCGCCCCTCGCCAAAAAATTTCCTGCGTCATCTGATT Pseudofusicoccum_adansoniae_WAC_13299 GCATGGTGCACGACCGCCCCTCGCCAAAAAATTTCCTGCGTCATCTGATT Pseudofusicoccum_ardesiacum_CBS_122062 GCATGGTGCACGACCGCCCCTCGCCAAAAA-TTTCCTGCGTCATCTGATT Pseudofusicoccum_ardesiacum_WAC_13294 GCATGGTGCACGACCGCCCCTCGCCAAAAA-TTTCCTGCGTCATCTGATT Pseudofusicoccum_kimberleyense_CBS122061 GCATGGTGCACGACCGCCCCTCGCCAAAAA-TTTCCTGCGTCATCTGATT Pseudofusicoccum_kimberleyense_WAC13293 GCATGG?GCACGACCGCCCCTCGCCAAAAA-TTTCCTGCGTCATCTGATT Pseudofusicoccum_stromaticum_CMM_3971 GCATGGTGCACGACCGCCCCTCGCCAAAAA-TTTCCTGCGTCATCTGATT Pseudofusicoccum_stromaticum_CMM_3978 GCATGGTGCACGACCGCCCCTCGCCAAAAA-TTTCCTGCGTCATCTGATT Pseudofusicoccum_stromaticum_CMM_3967 GCATGGTGCACGACCGCCCCTCGCCAAAAA-TTTCCTGCGTCATCTGATT Pseudofusicoccum_stromaticum_CMM_3964 GCATGGTGCACGACCGCCCCTCGCCAAAAA-TTTCCTGCGTCATCTGATT Pseudofusicoccum_stromaticum_CMM_3961 GCATGGTGCACGACCGCCCCTCGCCAAAAA-TTTCCTGCGTCATCTGATT Pseudofusicoccum_stromaticum_CMM_3965 GCATGGTGCACGACCGCCCCTCGCCAAAAA-TTTCCTGCGTCATCTGATT Pseudofusicoccum_stromaticum_CMW_13434 GCATGGTGCACGACCGCCCCTCGCCAAAAA-TTTCCTGCGTCATCTGATT Pseudofusicoccum_stromaticum_CMW_13435 GCATGGTGCACGACCGCCCCTCGCCAAAAA-TTTCCTGCGTCATCTGATT Pseudofusicoccum_stromaticum_CMM_3953 GCATGGTGCACGACCGCCCCTCGCCAAAAA-TTTCCTGCGTCATCTGATT Botryosphaeria_dothidea_CAP_288 --------CGCGAACACCCCTCACCAACGCTTCCAGCCACTCACGTTCGT Botryosphaeria_dothidea_CMW_8000 --------CGCGAACACCCCTCACCAACGCTTCCAGCCACTCACGTTCGT Pseudofusicoccum_adansoniae_CBS_122054 CCGCGCGACACGATGCTAACGCCCGCCACA---GGAAGCCGCTGAGCTCG Pseudofusicoccum_adansoniae_WAC_13299 CCGCGCGACACGATGCTAACGCCCGCCACA---GGAAGCCGCTGAGCTCG Pseudofusicoccum_ardesiacum_CBS_122062 CCGCGCGACACGATGCTAACGCCCGCAACA---GGAAGCCGCTGAGCTCG Pseudofusicoccum_ardesiacum_WAC_13294 CCGCGCGACACGATGCTAACGCCCGCCACA---GGAAGCCGCTGAGCTCG Pseudofusicoccum_kimberleyense_CBS122061 CCGCGCGACACGATGCTAACGCCCACCACA---GGAAGCCGCTGAGCTCG Pseudofusicoccum_kimberleyense_WAC13293 CCGCGCGACACGATGCTAACGCCCGCCACA---GGAAGCCGGTGAGCTCG Pseudofusicoccum_stromaticum_CMM_3971 CCGCGCGACACGATGCTAACGCCCACCACA---GGAAGCCGCTGAGCTCG Pseudofusicoccum_stromaticum_CMM_3978 CCGCGCGACACGATGCTAACGCCCACCACA---GGAAGCCGCTGAGCTCG Pseudofusicoccum_stromaticum_CMM_3967 CCGCGCGACACGATGCTAACGCCCACCACA---GGAAGCCGCTGAGCTCG Pseudofusicoccum_stromaticum_CMM_3964 CCGCGCGACACGATGCTAACGCCCACCACA---GGAAGCCGCTGAGCTCG Pseudofusicoccum_stromaticum_CMM_3961 CCGCGCGACACGATGCTAACGCCCACCACA---GGAAGCCGCTGAGCTCG Pseudofusicoccum_stromaticum_CMM_3965 CCGCGCGACACGATGCTAACGCCCACCACA---GGAAGCCGCTGAGCTCG Pseudofusicoccum_stromaticum_CMW_13434 CCGCGCGACACGATGCTAACGCCCACCACA---GGAAGCCGCTGAGCTCG Pseudofusicoccum_stromaticum_CMW_13435 CCGCGCGACACGATGCTAACGCCCACCACA---GGAAGCCGCTGAGCTCG Pseudofusicoccum_stromaticum_CMM_3953 CCGCGCGACACGATGCTAACGCCCACCACA---GGAAGCCGCTGAGCTCG Botryosphaeria_dothidea_CAP_288 CTATGCGACCATATGCTAACCACCGCCACAACAGGAAGCCGCTGAGCTCG Botryosphaeria_dothidea_CMW_8000 CTATGCGACCATATGCTAACCACCGCCACAACAGGAAGCCGCTGAGCTCG Pseudofusicoccum_adansoniae_CBS_122054 GCAAGGGTTC---------------------------------------- Pseudofusicoccum_adansoniae_WAC_13299 GCAAGGGTTC---------------------------------------- Pseudofusicoccum_ardesiacum_CBS_122062 GCAAGGGTTC---------------------------------------- Pseudofusicoccum_ardesiacum_WAC_13294 GCAAGGGTTC---------------------------------------- Pseudofusicoccum_kimberleyense_CBS122061 GTAAGGGTTC---------------------------------------- Pseudofusicoccum_kimberleyense_WAC13293 GCAAGGGTTC---------------------------------------- Pseudofusicoccum_stromaticum_CMM_3971 GCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAG Pseudofusicoccum_stromaticum_CMM_3978 GCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAG Pseudofusicoccum_stromaticum_CMM_3967 GCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAG Pseudofusicoccum_stromaticum_CMM_3964 GCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAG Pseudofusicoccum_stromaticum_CMM_3961 GCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAG Pseudofusicoccum_stromaticum_CMM_3965 GCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAG Pseudofusicoccum_stromaticum_CMW_13434 GTAAGGGTTC---------------------------------------- Pseudofusicoccum_stromaticum_CMW_13435 GTAAGGGTTC---------------------------------------- Pseudofusicoccum_stromaticum_CMM_3953 GCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAG Botryosphaeria_dothidea_CAP_288 GTAAGGGTTCCTTCAAGTA------------------------------- Botryosphaeria_dothidea_CMW_8000 GTAAGGGTTC---------------------------------------- Pseudofusicoccum_adansoniae_CBS_122054 -------------------------------------------------- Pseudofusicoccum_adansoniae_WAC_13299 -------------------------------------------------- Pseudofusicoccum_ardesiacum_CBS_122062 -------------------------------------------------- Pseudofusicoccum_ardesiacum_WAC_13294 -------------------------------------------------- Pseudofusicoccum_kimberleyense_CBS122061 -------------------------------------------------- Pseudofusicoccum_kimberleyense_WAC13293 -------------------------------------------------- Pseudofusicoccum_stromaticum_CMM_3971 CGTGAGCGTGGTATCACCATCGACATCGCTCTCTGGAAGTTCGAAACCCC Pseudofusicoccum_stromaticum_CMM_3978 CGTGAGCGTGGTATCACCATCGACATCGCTCTCTGGAAGTTCGAAACCCC Pseudofusicoccum_stromaticum_CMM_3967 CGTGAGCGTGGTATCACCATCGACATCGCTCTCTGGAAGTTCGAAACCCC Pseudofusicoccum_stromaticum_CMM_3964 CGTGAGCGTGGTATCACCATCGACATCGCTCTCTGGAAGTTCGAAACCCC Pseudofusicoccum_stromaticum_CMM_3961 CGTGAGCGTGGTATCACCATCGACATCGCTCTCTGGAAGTTCGAAACCCC Pseudofusicoccum_stromaticum_CMM_3965 CGTGAGCGTGGTATCACCATCGACATCGCTCTCTGGAAGTTCGAAACCCC Pseudofusicoccum_stromaticum_CMW_13434 -------------------------------------------------- Pseudofusicoccum_stromaticum_CMW_13435 -------------------------------------------------- Pseudofusicoccum_stromaticum_CMM_3953 CGTGAGCGTGGTATCACCATCGACATCGCTCTCTGGAAGTTCGAAACCCC Botryosphaeria_dothidea_CAP_288 -------------------------------------------------- Botryosphaeria_dothidea_CMW_8000 -------------------------------------------------- Pseudofusicoccum_adansoniae_CBS_122054 -------------------------------------------------- Pseudofusicoccum_adansoniae_WAC_13299 -------------------------------------------------- Pseudofusicoccum_ardesiacum_CBS_122062 -------------------------------------------------- Pseudofusicoccum_ardesiacum_WAC_13294 -------------------------------------------------- Pseudofusicoccum_kimberleyense_CBS122061 -------------------------------------------------- Pseudofusicoccum_kimberleyense_WAC13293 -------------------------------------------------- Pseudofusicoccum_stromaticum_CMM_3971 GAAGTACTATGTCACCGTCATTGACGCCCCCGGCCACCGTGACTTCATCA Pseudofusicoccum_stromaticum_CMM_3978 GAAGTACTATGTCACCGTCATTGACGCCCCCGGCCACCGTGACTTCATCA Pseudofusicoccum_stromaticum_CMM_3967 GAAGTACTATGTCACCGTCATTGACGCCCCCGGCCACCGTGACTTCATCA Pseudofusicoccum_stromaticum_CMM_3964 GAAGTACTATGTCACCGTCATTGACGCCCCCGGCCACCGTGACTTCATCA Pseudofusicoccum_stromaticum_CMM_3961 GAAGTACTATGTCACCGTCATTGACGCCCCCGGCCACCGTGACTTCATCA Pseudofusicoccum_stromaticum_CMM_3965 GAAGTACTATGTCACCGTCATTGACGCCCCCGGCCACCGTGACTTCATCA Pseudofusicoccum_stromaticum_CMW_13434 -------------------------------------------------- Pseudofusicoccum_stromaticum_CMW_13435 -------------------------------------------------- Pseudofusicoccum_stromaticum_CMM_3953 GAAGTACTATGTCACCGTCATTGACGCCCCCGGCCACCGTGACTTCATCA Botryosphaeria_dothidea_CAP_288 -------------------------------------------------- Botryosphaeria_dothidea_CMW_8000 -------------------------------------------------- Pseudofusicoccum_adansoniae_CBS_122054 -------------------------------------------------- Pseudofusicoccum_adansoniae_WAC_13299 -------------------------------------------------- Pseudofusicoccum_ardesiacum_CBS_122062 -------------------------------------------------- Pseudofusicoccum_ardesiacum_WAC_13294 -------------------------------------------------- Pseudofusicoccum_kimberleyense_CBS122061 -------------------------------------------------- Pseudofusicoccum_kimberleyense_WAC13293 -------------------------------------------------- Pseudofusicoccum_stromaticum_CMM_3971 AGAACATGATCACTGGTACCTCCCAGGCCGACTGCGCCATTCTCATCATT Pseudofusicoccum_stromaticum_CMM_3978 AGAACATGATCACTGGTACCTCCCAGGCCGACTGCGCCATTCTCATCATT Pseudofusicoccum_stromaticum_CMM_3967 AGAACATGATCACTGGTACCTCCCAGGCCGACTGCGCCATTCTCATCATT Pseudofusicoccum_stromaticum_CMM_3964 AGAACATGATCACTGGTACCTCCCAGGCCGACTGCGCCATTCTCATCATT Pseudofusicoccum_stromaticum_CMM_3961 AGAACATGATCACTGGTACCTCCCAGGCCGACTGCGCCATTCTCATCATT Pseudofusicoccum_stromaticum_CMM_3965 AGAACA-------------------------------------------- Pseudofusicoccum_stromaticum_CMW_13434 -------------------------------------------------- Pseudofusicoccum_stromaticum_CMW_13435 -------------------------------------------------- Pseudofusicoccum_stromaticum_CMM_3953 AGAACATGATCACTGGTACCTCCCAGGCCGACTGCGCCATTCTCATCATT Botryosphaeria_dothidea_CAP_288 -------------------------------------------------- Botryosphaeria_dothidea_CMW_8000 -------------------------------------------------- Pseudofusicoccum_adansoniae_CBS_122054 ------------------------- Pseudofusicoccum_adansoniae_WAC_13299 ------------------------- Pseudofusicoccum_ardesiacum_CBS_122062 ------------------------- Pseudofusicoccum_ardesiacum_WAC_13294 ------------------------- Pseudofusicoccum_kimberleyense_CBS122061 ------------------------- Pseudofusicoccum_kimberleyense_WAC13293 ------------------------- Pseudofusicoccum_stromaticum_CMM_3971 GCCGCCGGTACTGGTGAGTTCGAG- Pseudofusicoccum_stromaticum_CMM_3978 GCCGCCGGTA--------------- Pseudofusicoccum_stromaticum_CMM_3967 GCCGCCGGTACTGG----------- Pseudofusicoccum_stromaticum_CMM_3964 GCCGCCGGTACTG------------ Pseudofusicoccum_stromaticum_CMM_3961 GCCGCCGGTACTGGTGA-------- Pseudofusicoccum_stromaticum_CMM_3965 ------------------------- Pseudofusicoccum_stromaticum_CMW_13434 ------------------------- Pseudofusicoccum_stromaticum_CMW_13435 ------------------------- Pseudofusicoccum_stromaticum_CMM_3953 GCCGCCGGTACTGGTGAGTTCGAGG Botryosphaeria_dothidea_CAP_288 ------------------------- Botryosphaeria_dothidea_CMW_8000 ------------------------- ; END; BEGIN TREES; Title Pseudofusicoccum_MP_trees; LINK Taxa = Taxa; TRANSLATE 1 Pseudofusicoccum_adansoniae_CBS_122054, 2 Pseudofusicoccum_adansoniae_WAC_13299, 3 Pseudofusicoccum_ardesiacum_CBS_122062, 4 Pseudofusicoccum_ardesiacum_WAC_13294, 5 Pseudofusicoccum_kimberleyense_CBS122061, 6 Pseudofusicoccum_kimberleyense_WAC13293, 7 Pseudofusicoccum_stromaticum_CMM_3971, 8 Pseudofusicoccum_stromaticum_CMM_3978, 9 Pseudofusicoccum_stromaticum_CMM_3967, 10 Pseudofusicoccum_stromaticum_CMM_3964, 11 Pseudofusicoccum_stromaticum_CMM_3961, 12 Pseudofusicoccum_stromaticum_CMM_3965, 13 Pseudofusicoccum_stromaticum_CMW_13434, 14 Pseudofusicoccum_stromaticum_CMW_13435, 15 Pseudofusicoccum_stromaticum_CMM_3953, 16 Botryosphaeria_dothidea_CAP_288, 17 Botryosphaeria_dothidea_CMW_8000; TREE PAUP_1 = ((((1:12.0,2:12.0):10.0,(7:0.0,(8:0.0,11:0.0,12:0.0):1.0,9:0.0,10:0.0,(13:0.0,14:0.0):1.0,15:0.0):14.0):404.0,((3:1.0,4:0.0):1.0,(5:2.0,6:2.0):2.0):417.0):0.0,16:1.0,17:0.0); END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 1175; END; begin mrbayes; sumt filename = BOTLSU.t burnin = 2000 contype = halfcompat; log stop; END; BEGIN TREES; Title 'Trees from "bayes.tre"'; LINK Taxa = Taxa; TRANSLATE 1 Pseudofusicoccum_adansoniae_CBS_122054, 2 Pseudofusicoccum_adansoniae_WAC_13299, 3 Pseudofusicoccum_ardesiacum_CBS_122062, 4 Pseudofusicoccum_ardesiacum_WAC_13294, 5 Pseudofusicoccum_kimberleyense_CBS122061, 6 Pseudofusicoccum_kimberleyense_WAC13293, 7 Pseudofusicoccum_stromaticum_CMM_3971, 8 Pseudofusicoccum_stromaticum_CMM_3978, 9 Pseudofusicoccum_stromaticum_CMM_3967, 10 Pseudofusicoccum_stromaticum_CMM_3964, 11 Pseudofusicoccum_stromaticum_CMM_3961, 12 Pseudofusicoccum_stromaticum_CMM_3965, 13 Pseudofusicoccum_stromaticum_CMW_13434, 14 Pseudofusicoccum_stromaticum_CMW_13435, 15 Pseudofusicoccum_stromaticum_CMM_3953, 16 Botryosphaeria_dothidea_CAP_288, 17 Botryosphaeria_dothidea_CMW_8000; TREE con_50_majrule = (17:0.001643,16:0.002143,(((1:0.001188,2:0.001179)1.00:0.011481,(7:0.001149,9:0.001148,10:0.001142,15:0.001139,(8:0.001121,11:0.001135,12:0.001143)0.98:0.002269,(13:0.001167,14:0.00118)0.97:0.002289)0.94:0.016452)0.60:0.005285,((3:0.002379,4:0.001204)0.88:0.002839,(5:0.003511,6:0.003634)0.87:0.002988)0.60:0.005106)1.00:0.774618); TREE con_50_majrule = (17:0.001643,16:0.002143,(((1:0.001188,2:0.001179):0.011481,(7:0.001149,9:0.001148,10:0.001142,15:0.001139,(8:0.001121,11:0.001135,12:0.001143):0.002269,(13:0.001167,14:0.00118):0.002289):0.016452):0.005285,((3:0.002379,4:0.001204):0.002839,(5:0.003511,6:0.003634):0.002988):0.005106):0.774618); END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 1175; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1175; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1344267865324; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 2806747108326635981; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 7126898516163995075; mqVersion 274; checksumv 0 2 1619754953 null getNumChars 1175 numChars 1175 getNumTaxa 17 numTaxa 17 short true bits 15 states 15 sumSquaresStatesOnly 322236.0 sumSquares 322236.0 NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1280 728; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #7126898516163995075 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 0 -67; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; getWindow; tell It; forceAutosize; endTell; hideWindow; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;