#NEXUS [written Tue Sep 25 13:02:45 MDT 2012 by Mesquite version 2.75 (build 566) at Mitrovarr-Laptop-mk2/132.178.141.22] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=81; TAXLABELS Batrachochytrium_dendrobatidis_JEL423 Spizellomyces_punctatus Rhizophlyctis_rosea_JEL318 Allomyces_macrogynus_ATCC_38327 Allomyces_arbuscula_Brazil_2 Coelomomyces_stegomyiae_DUH0008925 Mucor_circinelloides_CBS277.49 Phycomyces_blakesleeanus_NRRL_1555 'Rhizopus oryzae 99-880' Coprinopsis_cinerea 'Cryptococcus neoformans B-3501A' Ustilago_maydis Aspergillus_nidulans_FGSC_A4 Saccharomyces_cerevisiae_S288c 'Schizosaccharomyces pombe 972h-' 'Rhopalomyces elegans NRRL A-10835' Conidiobolus_coronatus_NRRL_28638 'Entomaphaga conglomerata ARS-2273' Entomophthora_muscae_ARSEF3074 'Barbatospora ambicaudata TN-49-W4a' Coemansia_reversa_NRRL_1564 'Coemansia braziliensis NRRL-1566' 'Kickxella alabastrina NRRL-2693' 'Dipsacomyces acuminosporus NRRL-2925' 'Martensiomyces pterosporus NRRL-2642' 'Linderina pennispora NRRL-3781' 'Spirodactylon aureum NRRL-2810' 'Spiromyces minutus NRRL-3067' 'Spiromyces aspiralis NRRL-22631' 'Orphella catalaunica NOR-40-W10 + W12' 'Orphella dalhousiensis NS-34-W16' Ramicandelaber_longisporus_ATCC_6175 Ramicandelaber_longisporus_ATCC_6176 Dimargaris_bacillispora_NRRL_2808 'Harpellomyces montanus TN-22-W5B' 'Harpellomyces eccentricus NOR-56-W1' 'Bojamyces sp. CA-18-W17' 'Capniomyces sasquatchoides ID-130-N5' 'Capniomyces stellatus MIS-21-127' 'Caudomyces sp. OR-8-W10' 'Caudomyces sp. UT-1-W16a' Furculomyces_boomerangus 'Genistelloides hibernus KS-19-M23' 'Graminella microspora NOR-35-1' 'Harpellales sp. NF-MC-15' 'Harpella melusinae NF-15-5A' 'Harpella sp. NF-MC-18' 'Lancisporomyces falcatus NS-X-2' 'Lancisporomyces vernalis SPA-X-40' 'Legerioides tumidus NH-1-M869a' 'Legeriomyces minae PEI-X-6' 'Legeriomyces sp. CA-10-W15' 'Legeriomyces sp. nov. PEI-X-4' 'Legeriosimilis sp. NOR-31-2' 'Pennella sp. NOR-7-W12' 'Pteromaktron sp. OR-11-W8' 'Smittium culisetae COL-18-3' 'Smittium culisetae MAL-X-1' 'Harpellales sp. ALG-13-W1' 'Harpellales sp. ALG-10-W3' 'Smittium culicis 43-1-2' 'Smittium mucronatum FRA-12-3' 'Smittium simulii 41-1-6' 'Austrosmittium sp. 32-1-8' 'Coleopteromyces amnicus ARG-15-6F' Pseudoharpella_arcomylica_LCF_3 'Smittium angustum AUS-126-30' 'Smittium annulatum CR-143-8' 'Smittium caudatum KS-1-2' 'Smittium coloradense RMBL-13-41' 'Smittium commune KS-6-6' 'Smittium cylindrosporum CHI-27-1' 'Smittium gravimetallum KS-F1-3' 'Smittium megazygosporum SC-DP-2' 'Smittium morbosum AUS-X-1' 'Smittium orthocladii LCF-BT-1' 'Smittium tipulidarum RMBL-31-1' 'Smittium tronadorium ARG-24-2F' 'Stachylina lentica NOR-58-10' 'Stachylina sp. NS-X-10' 'Trichozygospora chironidarum TN-3-16' ; END; BEGIN TREES; Title 'Trees from "Fig S1 Bayesian MCM7n tree.tre"'; LINK Taxa = Taxa; TRANSLATE 1 Batrachochytrium_dendrobatidis_JEL423, 2 Spizellomyces_punctatus, 3 Rhizophlyctis_rosea_JEL318, 4 Allomyces_macrogynus_ATCC_38327, 5 Allomyces_arbuscula_Brazil_2, 6 Coelomomyces_stegomyiae_DUH0008925, 7 Mucor_circinelloides_CBS277.49, 8 Phycomyces_blakesleeanus_NRRL_1555, 9 'Rhizopus oryzae 99-880', 10 Coprinopsis_cinerea, 11 'Cryptococcus neoformans B-3501A', 12 Ustilago_maydis, 13 Aspergillus_nidulans_FGSC_A4, 14 Saccharomyces_cerevisiae_S288c, 15 'Schizosaccharomyces pombe 972h-', 16 'Rhopalomyces elegans NRRL A-10835', 17 Conidiobolus_coronatus_NRRL_28638, 18 'Entomaphaga conglomerata ARS-2273', 19 Entomophthora_muscae_ARSEF3074, 20 'Barbatospora ambicaudata TN-49-W4a', 21 Coemansia_reversa_NRRL_1564, 22 'Coemansia braziliensis NRRL-1566', 23 'Kickxella alabastrina NRRL-2693', 24 'Dipsacomyces acuminosporus NRRL-2925', 25 'Martensiomyces pterosporus NRRL-2642', 26 'Linderina pennispora NRRL-3781', 27 'Spirodactylon aureum NRRL-2810', 28 'Spiromyces minutus NRRL-3067', 29 'Spiromyces aspiralis NRRL-22631', 30 'Orphella catalaunica NOR-40-W10 + W12', 31 'Orphella dalhousiensis NS-34-W16', 32 Ramicandelaber_longisporus_ATCC_6175, 33 Ramicandelaber_longisporus_ATCC_6176, 34 Dimargaris_bacillispora_NRRL_2808, 35 'Harpellomyces montanus TN-22-W5B', 36 'Harpellomyces eccentricus NOR-56-W1', 37 'Bojamyces sp. CA-18-W17', 38 'Capniomyces sasquatchoides ID-130-N5', 39 'Capniomyces stellatus MIS-21-127', 40 'Caudomyces sp. OR-8-W10', 41 'Caudomyces sp. UT-1-W16a', 42 Furculomyces_boomerangus, 43 'Genistelloides hibernus KS-19-M23', 44 'Graminella microspora NOR-35-1', 45 'Harpellales sp. NF-MC-15', 46 'Harpella melusinae NF-15-5A', 47 'Harpella sp. NF-MC-18', 48 'Lancisporomyces falcatus NS-X-2', 49 'Lancisporomyces vernalis SPA-X-40', 50 'Legerioides tumidus NH-1-M869a', 51 'Legeriomyces minae PEI-X-6', 52 'Legeriomyces sp. CA-10-W15', 53 'Legeriomyces sp. nov. PEI-X-4', 54 'Legeriosimilis sp. NOR-31-2', 55 'Pennella sp. NOR-7-W12', 56 'Pteromaktron sp. OR-11-W8', 57 'Smittium culisetae COL-18-3', 58 'Smittium culisetae MAL-X-1', 59 'Harpellales sp. ALG-13-W1', 60 'Harpellales sp. ALG-10-W3', 61 'Smittium culicis 43-1-2', 62 'Smittium mucronatum FRA-12-3', 63 'Smittium simulii 41-1-6', 64 'Austrosmittium sp. 32-1-8', 65 'Coleopteromyces amnicus ARG-15-6F', 66 Pseudoharpella_arcomylica_LCF_3, 67 'Smittium angustum AUS-126-30', 68 'Smittium annulatum CR-143-8', 69 'Smittium caudatum KS-1-2', 70 'Smittium coloradense RMBL-13-41', 71 'Smittium commune KS-6-6', 72 'Smittium cylindrosporum CHI-27-1', 73 'Smittium gravimetallum KS-F1-3', 74 'Smittium megazygosporum SC-DP-2', 75 'Smittium morbosum AUS-X-1', 76 'Smittium orthocladii LCF-BT-1', 77 'Smittium tipulidarum RMBL-31-1', 78 'Smittium tronadorium ARG-24-2F', 79 'Stachylina lentica NOR-58-10', 80 'Stachylina sp. NS-X-10', 81 'Trichozygospora chironidarum TN-3-16'; TREE con_50_majrule = (1:0.5186279348920371,(2:0.2983971497982399,3:0.2224854055980438):0.1200717644522038,(((((((4:0.04653925865370707,5:0.01443416655899739):0.08738737927137526,6:0.5120100333965621):0.4503642482080253,16:0.3122907116392986,((((20:0.2328228656444537,((((((21:8.444579025102757E-4,22:8.527398969066371E-4):0.2300418787518129,27:0.09661681204215172):0.03353619075901886,(23:0.04608651971526997,26:0.1993475906653404):0.02844982035916844):0.03428044939489632,(24:0.128487761427171,25:0.07367026440855132):0.1590069485840257):0.1162616544444731,((((35:0.07339956651068896,36:0.1903540459008703):0.07582268508350172,((42:0.001389360360817363,67:0.001298128020251273):0.2934788343937295,(((((61:0.06956686763703142,68:0.1025191626148362):0.06763674270139754,69:0.2486810382361952,70:0.1291930941306688):0.03505495145211814,62:0.1485642546205531,64:0.4286910612983613):0.1827337225982186,((((63:0.01979251757538163,(71:7.663064514711026E-4,81:7.357355468676042E-4):0.01234376861362592):0.07828944004350687,((65:0.1137989432265369,(66:0.1734947945690136,72:0.2758684330776725):0.08501001774418787):0.04930139784055724,77:0.09916962869476713):0.07165054265696297):0.04779395842582555,(76:0.03688433442469179,78:0.1989992385254156):0.2610747658547581):0.06951099814649943,(73:0.003203570661383999,74:0.006819239533528196):0.2907663805176184):0.04829183428243748):0.05123719288380454,(75:0.1249807587449889,(79:0.07744594908369183,80:0.07137719314727185):0.1357569424169068):0.1272758438130299):0.1473656024825443):0.32524804143384):0.0465849367936635,((45:7.209269102251385E-4,46:7.471202103086691E-4):0.5185444651421519,(47:0.001879119911490179,55:0.001606600112121023):0.3769855336521672):0.2664792501351941):0.05053822586233761,(((((37:0.3311096895216106,((44:1.008265390984688,56:0.1694128923938213):0.2263316712921643,(57:0.001561888395404555,58:0.001291724156107728):0.2205118226359018):0.1144863344430855):0.07706899138770851,(((38:0.1724707923505843,(52:0.01682268791524743,54:0.03384172029607726):0.2181619278592526):0.07071338640172607,50:0.1858759462712252):0.04715397347102315,(51:9.43014837877651E-4,53:0.003442322456901477):0.1729866449695063):0.04177512487414997):0.1163075457167451,(39:0.08416872357272787,(59:7.88072620450883E-4,60:8.136925473182286E-4):0.1932909252884343):0.04415411200863657):0.18003473503049,(43:0.67877270164322,(48:0.1227529203629502,49:0.3103881481347889):0.0663975215069276):0.3848335041968278):0.1607102235184365,(40:0.0054955789851888,41:0.002178202069027202):0.1815462132949864):0.05620346030164191):0.1723437492211079):0.0490611476727555,(28:0.3787692837878206,29:0.1126095057757852):0.08283309496616965):0.09618754367505314):0.05576957653701522,(30:0.5757007985061926,31:0.2084534501224867):0.2997818058652161):0.08728733480456997,(32:0.001739529369175104,33:8.164353279785622E-4):0.6279285078518884):0.05590394619378743,34:0.3942588522509158):0.0641274501174714):0.03917028258783908,12:0.3792900940645278):0.1354186251199679,((7:0.09453096742411808,9:0.2262770415631619):0.09863637030196046,8:0.1757275703814232):0.14874879321796):0.05329580980461751,(13:0.305661172765767,(14:0.4673530222063091,15:0.3361115572788983):0.07367672057614416):0.1096898971672841):0.04447579657271719,((10:0.277278868350972,11:0.2924246828522446):0.06575246672477758,(17:0.3074456315496751,(18:0.2834079741724749,19:0.2474463499054939):0.1360366260615557):0.1644284552576094):0.04163977494634739):0.1164495325075967); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1348599765825; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 1179525256439064151; endTell; getWindow; tell It; suppress; setResourcesState false false 302; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 464; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #1179525256439064151 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #1179525256439064151; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 398 397; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; endTell; end;