#NEXUS [written Tue Sep 25 12:49:01 MDT 2012 by Mesquite version 2.75 (build 566) at Mitrovarr-Laptop-mk2/132.178.141.22] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=81; TAXLABELS Batrachochytrium_dendrobatidis_JEL423 Spizellomyces_punctatus Rhizophlyctis_rosea_JEL318 Allomyces_macrogynus_ATCC_38327 Allomyces_arbuscula_Brazil_2 Coelomomyces_stegomyiae_DUH0008925 Mucor_circinelloides_CBS277.49 Phycomyces_blakesleeanus_NRRL_1555 'Rhizopus oryzae 99-880' Coprinopsis_cinerea 'Cryptococcus neoformans B-3501A' Ustilago_maydis Aspergillus_nidulans_FGSC_A4 Saccharomyces_cerevisiae_S288c 'Schizosaccharomyces pombe 972h-' 'Rhopalomyces elegans NRRL A-10835' Conidiobolus_coronatus_NRRL_28638 'Entomaphaga conglomerata ARS-2273' Entomophthora_muscae_ARSEF3074 'Barbatospora ambicaudata TN-49-W4a' Coemansia_reversa_NRRL_1564 'Coemansia braziliensis NRRL-1566' 'Kickxella alabastrina NRRL-2693' 'Dipsacomyces acuminosporus NRRL-2925' 'Martensiomyces pterosporus NRRL-2642' 'Linderina pennispora NRRL-3781' 'Spirodactylon aureum NRRL-2810' 'Spiromyces minutus NRRL-3067' 'Spiromyces aspiralis NRRL-22631' 'Orphella catalaunica NOR-40-W10 + W12' 'Orphella dalhousiensis NS-34-W16' Ramicandelaber_longisporus_ATCC_6175 Ramicandelaber_longisporus_ATCC_6176 Dimargaris_bacillispora_NRRL_2808 'Harpellomyces montanus TN-22-W5B' 'Harpellomyces eccentricus NOR-56-W1' 'Bojamyces sp. CA-18-W17' 'Capniomyces sasquatchoides ID-130-N5' 'Capniomyces stellatus MIS-21-127' 'Caudomyces sp. OR-8-W10' 'Caudomyces sp. UT-1-W16a' Furculomyces_boomerangus 'Genistelloides hibernus KS-19-M23' 'Graminella microspora NOR-35-1' 'Harpellales sp. NF-MC-15' 'Harpella melusinae NF-15-5A' 'Harpella sp. NF-MC-18' 'Pennella sp. NOR-7-W12' 'Lancisporomyces falcatus NS-X-2' 'Lancisporomyces vernalis SPA-X-40' 'Legerioides tumidus NH-1-M869a' 'Legeriomyces minae PEI-X-6' 'Legeriomyces sp. CA-10-W15' 'Legeriomyces sp. nov. PEI-X-4' 'Legeriosimilis sp. NOR-31-2' 'Pteromaktron sp. OR-11-W8' 'Smittium culisetae COL-18-3' 'Smittium culisetae MAL-X-1' 'Harpellales sp. ALG-13-W1' 'Harpellales sp. ALG-10-W3' 'Smittium culicis 43-1-2' 'Smittium mucronatum FRA-12-3' 'Smittium simulii 41-1-6' 'Austrosmittium sp. 32-1-8' 'Coleopteromyces amnicus ARG-15-6F' Pseudoharpella_arcomylica_LCF_3 'Smittium angustum AUS-126-30' 'Smittium annulatum CR-143-8' 'Smittium caudatum KS-1-2' 'Smittium coloradense RMBL-13-41' 'Smittium commune KS-6-6' 'Smittium cylindrosporum CHI-27-1' 'Smittium gravimetallum KS-F1-3' 'Smittium megazygosporum SC-DP-2' 'Smittium morbosum AUS-X-1' 'Smittium orthocladii LCF-BT-1' 'Smittium tipulidarum RMBL-31-1' 'Smittium tronadorium ARG-24-2F' 'Stachylina lentica NOR-58-10' 'Stachylina sp. NS-X-10' 'Trichozygospora chironidarum TN-3-16' ; END; BEGIN TREES; Title 'Trees from "Fig 1 Bayesian MCM7p tree.tre"'; LINK Taxa = Taxa; TRANSLATE 1 Batrachochytrium_dendrobatidis_JEL423, 2 Spizellomyces_punctatus, 3 Rhizophlyctis_rosea_JEL318, 4 Allomyces_macrogynus_ATCC_38327, 5 Allomyces_arbuscula_Brazil_2, 6 Coelomomyces_stegomyiae_DUH0008925, 7 Mucor_circinelloides_CBS277.49, 8 Phycomyces_blakesleeanus_NRRL_1555, 9 'Rhizopus oryzae 99-880', 10 Coprinopsis_cinerea, 11 'Cryptococcus neoformans B-3501A', 12 Ustilago_maydis, 13 Aspergillus_nidulans_FGSC_A4, 14 Saccharomyces_cerevisiae_S288c, 15 'Schizosaccharomyces pombe 972h-', 16 'Rhopalomyces elegans NRRL A-10835', 17 Conidiobolus_coronatus_NRRL_28638, 18 'Entomaphaga conglomerata ARS-2273', 19 Entomophthora_muscae_ARSEF3074, 20 'Barbatospora ambicaudata TN-49-W4a', 21 Coemansia_reversa_NRRL_1564, 22 'Coemansia braziliensis NRRL-1566', 23 'Kickxella alabastrina NRRL-2693', 24 'Dipsacomyces acuminosporus NRRL-2925', 25 'Martensiomyces pterosporus NRRL-2642', 26 'Linderina pennispora NRRL-3781', 27 'Spirodactylon aureum NRRL-2810', 28 'Spiromyces minutus NRRL-3067', 29 'Spiromyces aspiralis NRRL-22631', 30 'Orphella catalaunica NOR-40-W10 + W12', 31 'Orphella dalhousiensis NS-34-W16', 32 Ramicandelaber_longisporus_ATCC_6175, 33 Ramicandelaber_longisporus_ATCC_6176, 34 Dimargaris_bacillispora_NRRL_2808, 35 'Harpellomyces montanus TN-22-W5B', 36 'Harpellomyces eccentricus NOR-56-W1', 37 'Bojamyces sp. CA-18-W17', 38 'Capniomyces sasquatchoides ID-130-N5', 39 'Capniomyces stellatus MIS-21-127', 40 'Caudomyces sp. OR-8-W10', 41 'Caudomyces sp. UT-1-W16a', 42 Furculomyces_boomerangus, 43 'Genistelloides hibernus KS-19-M23', 44 'Graminella microspora NOR-35-1', 45 'Harpellales sp. NF-MC-15', 46 'Harpella melusinae NF-15-5A', 47 'Harpella sp. NF-MC-18', 48 'Pennella sp. NOR-7-W12', 49 'Lancisporomyces falcatus NS-X-2', 50 'Lancisporomyces vernalis SPA-X-40', 51 'Legerioides tumidus NH-1-M869a', 52 'Legeriomyces minae PEI-X-6', 53 'Legeriomyces sp. CA-10-W15', 54 'Legeriomyces sp. nov. PEI-X-4', 55 'Legeriosimilis sp. NOR-31-2', 56 'Pteromaktron sp. OR-11-W8', 57 'Smittium culisetae COL-18-3', 58 'Smittium culisetae MAL-X-1', 59 'Harpellales sp. ALG-13-W1', 60 'Harpellales sp. ALG-10-W3', 61 'Smittium culicis 43-1-2', 62 'Smittium mucronatum FRA-12-3', 63 'Smittium simulii 41-1-6', 64 'Austrosmittium sp. 32-1-8', 65 'Coleopteromyces amnicus ARG-15-6F', 66 Pseudoharpella_arcomylica_LCF_3, 67 'Smittium angustum AUS-126-30', 68 'Smittium annulatum CR-143-8', 69 'Smittium caudatum KS-1-2', 70 'Smittium coloradense RMBL-13-41', 71 'Smittium commune KS-6-6', 72 'Smittium cylindrosporum CHI-27-1', 73 'Smittium gravimetallum KS-F1-3', 74 'Smittium megazygosporum SC-DP-2', 75 'Smittium morbosum AUS-X-1', 76 'Smittium orthocladii LCF-BT-1', 77 'Smittium tipulidarum RMBL-31-1', 78 'Smittium tronadorium ARG-24-2F', 79 'Stachylina lentica NOR-58-10', 80 'Stachylina sp. NS-X-10', 81 'Trichozygospora chironidarum TN-3-16'; TREE con_50_majrule = (1:0.3579970969239264,(2:0.07753954888693648,3:0.1498744697648489):0.1077769077289086,((((4:0.007264731514324492,5:0.007297796616804401):0.1087984075225157,6:0.2294471601903724):0.3474726651833234,(16:0.1921475526799835,((17:0.2247179399979407,(18:0.1342978374704389,19:0.1189212200243932):0.1155618828377659):0.09578685733368748,((20:0.2472842525443214,((((((21:0.003355779381322687,22:0.003412217161272293):0.2184527110873859,27:0.04725816223985429):0.02627703073048651,(23:0.05237983336800528,26:0.1608944621245941):0.03682450852393328):0.0363271257047882,(24:0.01122521289745662,25:0.01968204532716963):0.03631510183929763):0.2012786507226468,((((35:0.006353107144990179,36:0.078789644519546):0.1164382377572344,(40:0.00325774996039311,41:0.003439415994985344):0.207982482238928):0.05859510262164634,((37:0.1887491624451351,(((38:0.1647168608463331,(53:0.007268800792005809,55:0.01218015143796648):0.07918210011607785):0.03535830892452384,51:0.09267941955928416,(52:0.003127212817752452,54:0.007352517957333933):0.0987593586384918):0.03851124860935072,(39:0.05570725844957071,(59:0.002856846209765662,60:0.0030879679298097):0.05719252039321569):0.02065058496758293):0.09191569418108039,((44:0.9894632452384241,56:0.2155118022897845):0.1718784228831872,(57:0.003128702537563429,58:0.003185265800377246):0.1805266838196941):0.1086799710316157):0.1676317419272292,((43:0.4746983140466233,(49:0.08227442299128836,50:0.1500621185902934):0.0433271020885033):0.1688835313112511,((45:0.003178089408462949,46:0.003047864628470905):0.3696833658377011,(47:0.003199629088069469,48:0.003196047571331185):0.2795710555809074):0.2197101083960065):0.0465599082614332):0.08478840251908946):0.03029908716858504,((42:0.003148613392680646,67:0.003174930923630494):0.1167278721819736,((((61:0.01150223221994323,68:0.01706149762171871):0.03165462082108096,70:0.04721672664714193):0.03862614228664385,62:0.08065447740659921,64:0.1765265405226599,69:0.07456373649371395):0.1982649839816417,(((((63:0.005760348668812209,(71:0.003138995180274144,81:0.003060169158372999):0.008841297442653724):0.01827841631743665,(72:0.1464423336670979,(76:0.03218927813037701,78:0.02218232398215859):0.153148399463918):0.04548108852232963):0.03145993461955052,66:0.07704614886191498):0.02342501979990187,(65:0.0904229934062776,77:0.04926116674347548):0.02787462352876263):0.05129469304021175,(73:0.003243500619078174,74:0.003131624749640568):0.1837340406099436):0.056143597266453):0.03673178086470155,(75:0.1013327670639491,(79:0.06439182024957248,80:0.03026154883370239):0.1128896888076175):0.09611294894516134):0.06187145826101219):0.2787154327311206):0.0418890088299683,(28:0.1223125139077584,29:0.08321607772747788):0.05788122150805733,(30:0.313221933841589,31:0.1066891238624736):0.1057256280860874):0.07080894672721022):0.07318800218847915,((32:0.007284769278668359,33:0.003056961036584382):0.3587561662601428,34:0.2492395914844531):0.06091103834564911):0.06161170888117314):0.02360242586255833):0.03000524579924801):0.03731769402387035,((((7:0.05928329287946258,9:0.0778641129455977):0.07599739565271714,8:0.09800398568785537):0.1384391924265646,((13:0.2137798917714762,14:0.3580032743368442):0.04581095895632775,15:0.1452851976125159):0.07602220758086507):0.02977990745711729,((10:0.2298009077176673,12:0.2299197275827686):0.06153371132423249,11:0.2034919277211234):0.1018060890668286):0.02680437643046235):0.09524751072432465); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1348598941300; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 2669329323692465498; endTell; getWindow; tell It; suppress; setResourcesState false false 302; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1366 662; setLocation -8 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #2669329323692465498 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #2669329323692465498; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1064 595; setLocation -8 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; endTell; end;