#NEXUS [written Tue Sep 25 12:51:58 MDT 2012 by Mesquite version 2.75 (build 566) at Mitrovarr-Laptop-mk2/132.178.141.22] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=76; TAXLABELS Batrachochytrium_dendrobatidis_JEL423 Spizellomyces_punctatus Rhizophlyctis_rosea_JEL318 Allomyces_macrogynus_ATCC_38327 Allomyces_arbuscula_Brazil_2 Coelomomyces_stegomyiae_DUH0008925 Mucor_circinelloides_CBS277.49 Phycomyces_blakesleeanus_NRRL_1555 'Rhizopus oryzae 99-880' Coprinopsis_cinerea 'Cryptococcus neoformans B-3501A' Ustilago_maydis Aspergillus_nidulans_FGSC_A4 Saccharomyces_cerevisiae_S288c 'Schizosaccharomyces pombe 972h-' 'Rhopalomyces elegans NRRL A-10835' Conidiobolus_coronatus_NRRL_28638 Entomophthora_muscae_ARSEF3074 'Barbatospora ambicaudata TN-49-W4a' Coemansia_reversa_NRRL_1564 'Coemansia braziliensis NRRL-1566' 'Kickxella alabastrina NRRL-2693' 'Dipsacomyces acuminosporus NRRL-2925' 'Martensiomyces pterosporus NRRL-2642' 'Linderina pennispora NRRL-3781' 'Spirodactylon aureum NRRL-2810' 'Spiromyces minutus NRRL-3067' 'Spiromyces aspiralis NRRL-22631' 'Orphella catalaunica NOR-40-W10 + W12' 'Orphella dalhousiensis NS-34-W16' Ramicandelaber_longisporus_ATCC_6175 Dimargaris_bacillispora_NRRL_2808 'Harpellomyces montanus TN-22-W5B' 'Bojamyces sp. CA-18-W17' 'Capniomyces sasquatchoides ID-130-N5' 'Capniomyces stellatus MIS-21-127' 'Caudomyces sp. OR-8-W10' 'Caudomyces sp. UT-1-W16a' Furculomyces_boomerangus 'Genistelloides hibernus KS-19-M23' 'Graminella microspora NOR-35-1' 'Harpellales sp. NF-MC-15' 'Harpella melusinae NF-15-5A' 'Harpella sp. NF-MC-18' 'Lancisporomyces falcatus NS-X-2' 'Lancisporomyces vernalis SPA-X-40' 'Legerioides tumidus NH-1-M869a' 'Legeriomyces minae PEI-X-6' 'Legeriomyces sp. CA-10-W15' 'Legeriomyces sp. nov. PEI-X-4' 'Legeriosimilis sp. NOR-31-2' 'Pennella sp. NOR-7-W12' 'Pteromaktron sp. OR-11-W8' 'Smittium culisetae COL-18-3' 'Smittium culisetae MAL-X-1' 'Harpellales sp. ALG-13-W1' 'Harpellales sp. ALG-10-W3' 'Smittium culicis 43-1-2' 'Smittium mucronatum FRA-12-3' 'Smittium simulii 41-1-6' 'Coleopteromyces amnicus ARG-15-6F' Pseudoharpella_arcomylica_LCF_3 'Smittium angustum AUS-126-30' 'Smittium annulatum CR-143-8' 'Smittium caudatum KS-1-2' 'Smittium coloradense RMBL-13-41' 'Smittium commune KS-6-6' 'Smittium cylindrosporum CHI-27-1' 'Smittium gravimetallum KS-F1-3' 'Smittium megazygosporum SC-DP-2' 'Smittium morbosum AUS-X-1' 'Smittium orthocladii LCF-BT-1' 'Smittium tipulidarum RMBL-31-1' 'Smittium tronadorium ARG-24-2F' 'Stachylina lentica NOR-58-10' 'Trichozygospora chironidarum TN-3-16' ; END; BEGIN TREES; Title 'Trees from "Fig 3 Bayesian rDNA tree.tre"'; LINK Taxa = Taxa; TRANSLATE 1 Batrachochytrium_dendrobatidis_JEL423, 2 Spizellomyces_punctatus, 3 Rhizophlyctis_rosea_JEL318, 4 Allomyces_macrogynus_ATCC_38327, 5 Allomyces_arbuscula_Brazil_2, 6 Coelomomyces_stegomyiae_DUH0008925, 7 Mucor_circinelloides_CBS277.49, 8 Phycomyces_blakesleeanus_NRRL_1555, 9 'Rhizopus oryzae 99-880', 10 Coprinopsis_cinerea, 11 'Cryptococcus neoformans B-3501A', 12 Ustilago_maydis, 13 Aspergillus_nidulans_FGSC_A4, 14 Saccharomyces_cerevisiae_S288c, 15 'Schizosaccharomyces pombe 972h-', 16 'Rhopalomyces elegans NRRL A-10835', 17 Conidiobolus_coronatus_NRRL_28638, 18 Entomophthora_muscae_ARSEF3074, 19 'Barbatospora ambicaudata TN-49-W4a', 20 Coemansia_reversa_NRRL_1564, 21 'Coemansia braziliensis NRRL-1566', 22 'Kickxella alabastrina NRRL-2693', 23 'Dipsacomyces acuminosporus NRRL-2925', 24 'Martensiomyces pterosporus NRRL-2642', 25 'Linderina pennispora NRRL-3781', 26 'Spirodactylon aureum NRRL-2810', 27 'Spiromyces minutus NRRL-3067', 28 'Spiromyces aspiralis NRRL-22631', 29 'Orphella catalaunica NOR-40-W10 + W12', 30 'Orphella dalhousiensis NS-34-W16', 31 Ramicandelaber_longisporus_ATCC_6175, 32 Dimargaris_bacillispora_NRRL_2808, 33 'Harpellomyces montanus TN-22-W5B', 34 'Bojamyces sp. CA-18-W17', 35 'Capniomyces sasquatchoides ID-130-N5', 36 'Capniomyces stellatus MIS-21-127', 37 'Caudomyces sp. OR-8-W10', 38 'Caudomyces sp. UT-1-W16a', 39 Furculomyces_boomerangus, 40 'Genistelloides hibernus KS-19-M23', 41 'Graminella microspora NOR-35-1', 42 'Harpellales sp. NF-MC-15', 43 'Harpella melusinae NF-15-5A', 44 'Harpella sp. NF-MC-18', 45 'Lancisporomyces falcatus NS-X-2', 46 'Lancisporomyces vernalis SPA-X-40', 47 'Legerioides tumidus NH-1-M869a', 48 'Legeriomyces minae PEI-X-6', 49 'Legeriomyces sp. CA-10-W15', 50 'Legeriomyces sp. nov. PEI-X-4', 51 'Legeriosimilis sp. NOR-31-2', 52 'Pennella sp. NOR-7-W12', 53 'Pteromaktron sp. OR-11-W8', 54 'Smittium culisetae COL-18-3', 55 'Smittium culisetae MAL-X-1', 56 'Harpellales sp. ALG-13-W1', 57 'Harpellales sp. ALG-10-W3', 58 'Smittium culicis 43-1-2', 59 'Smittium mucronatum FRA-12-3', 60 'Smittium simulii 41-1-6', 61 'Coleopteromyces amnicus ARG-15-6F', 62 Pseudoharpella_arcomylica_LCF_3, 63 'Smittium angustum AUS-126-30', 64 'Smittium annulatum CR-143-8', 65 'Smittium caudatum KS-1-2', 66 'Smittium coloradense RMBL-13-41', 67 'Smittium commune KS-6-6', 68 'Smittium cylindrosporum CHI-27-1', 69 'Smittium gravimetallum KS-F1-3', 70 'Smittium megazygosporum SC-DP-2', 71 'Smittium morbosum AUS-X-1', 72 'Smittium orthocladii LCF-BT-1', 73 'Smittium tipulidarum RMBL-31-1', 74 'Smittium tronadorium ARG-24-2F', 75 'Stachylina lentica NOR-58-10', 76 'Trichozygospora chironidarum TN-3-16'; TREE con_50_majrule = (1:0.09201122221602373,((((4:0.001378728977067671,5:0.001712416321341428):0.06018494395806149,6:0.3410301160899988):0.07115842747801025,(17:0.155181079736414,18:0.1741732346281654):0.0565490893570494):0.01502936251680222,(((((7:0.01898974594328179,9:0.02356665697819541):0.02650660642990622,8:0.06394570240846546):0.1245545043428163,(((10:0.05279963487246874,11:0.04710600730080266):0.01208394769734665,12:0.09667247441674465):0.02089952380866842,((13:0.0879442453780368,14:0.03337230620362158):0.02251811571812694,15:0.03347357960959689):0.02193154031644221):0.01027835646870745):0.01131654559822573,((16:0.1249271486872114,31:0.1147694967269261):0.01281639916433182,32:0.5628260980614848):0.01965041086049909):0.01164653684540451,(19:0.05962611031122475,((((((((20:0.02130850747127928,26:0.119279098361581):0.01346466304686728,21:0.05231510533540601):0.04874591939342359,22:0.0501005110414451):0.01618912450043706,25:0.03435080358157458):0.01100209504302991,(23:0.04232486777251426,24:0.01302162875522835):0.009193762515912711):0.06954430285385636,(29:0.03794906869829295,30:0.01727949737425287):0.1196356050278606):0.06158938271963699,(27:0.01595178084385824,28:0.05031533538496812):0.03680288857312703):0.02479068382973172,((((33:0.02814165894551937,((((34:0.008135520127847863,((((35:0.007886748342917988,(48:4.374415126394833E-4,50:4.417395272920582E-4):0.01192149873922247):0.001485951630153803,47:0.001049720066973183,49:4.366815470393755E-4):0.001056166216124351,51:4.895067714253356E-4):0.001653227736505947,(36:0.005089901174671003,(56:4.354265834971656E-4,57:4.458801725341651E-4):0.005011192149796291):0.003409540350497588,((41:0.01122548954207073,53:0.009125321562510747):0.004920768760593911,(54:7.172404056330566E-4,55:5.262566703893862E-4):0.003764051052906205):0.02320110807355919):0.001755141459889116):0.008393880866984088,52:0.01129193523514384):0.00233974022666438,((40:0.01093652898458032,45:0.001609338998465746):0.00233954897231172,46:0.01157094053677007):0.00824088664072993):0.004207763099083836,(42:4.377873183237381E-4,43:4.393668897826464E-4,44:4.42085696966787E-4):0.0183958529287052):0.007190377208028345):0.008722458674543836,(((58:0.00454433435089981,64:0.004572407240372189):0.002877664234421212,(59:0.0127330319708414,66:0.008926464581448731):0.002880862236496303):0.006126282371249239,65:0.01635213287749365):0.006186420279581115):0.005551651607807092,((((60:4.334799272029698E-4,67:0.00616523032209474,76:4.436143938006685E-4):0.001849179678060659,((68:0.01027890604491173,(69:0.003858470402247726,70:0.00378555729322782):0.02361617354444706):0.004274599217999333,(72:0.004568561040345953,74:0.001328717716432643):0.001523523661583155):0.001695151484534508):0.001886070772132143,61:0.003014316038813136,73:0.002498762327451517):0.002866330882758312,62:8.882165469034886E-4):0.01616358870387769):0.005369365748596418,((37:4.322085162248079E-4,38:4.395874991139515E-4):0.02120577484511531,(71:0.01871328970082272,75:0.03252240473694745):0.02164198470943545):0.006569027717664122,(39:0.004693274111218827,63:0.00177898506645526):0.02001431105354189):0.06293642721693259):0.02045155428078959):0.01744529551856444):0.01227304883535702):0.01811208021576283,(2:0.02854284764389615,3:0.004999360347120194):0.01465682578367621); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1348599118859; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 4732325048769038683; endTell; getWindow; tell It; suppress; setResourcesState false false 302; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 500; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #4732325048769038683 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #4732325048769038683; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 398 433; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; 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