#NEXUS [MacClade 4.06 registered to Mary Berbee, University of British Columbia] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=68; TAXLABELS Helvella_macropus_MES198 Helvella_lacunosa_MES218 Helvella_lacunosa_MES286 Helvella_acetabulum_MES215 Balsamia_MES84 Balsamia_SRC395 Balsamia_SRC868 Underwoodia_singeri_mes161_Chile Underwoodia_beatonii_JT28380_Australia Gymnohydnotrya_australiana_JT19760 Gymnohydnotrya_australiana_OSC130601 Labyrinthomyces_JT27750_Australia Labyrinthomyces_JT28821_Australia Dingleya_JT31575_Australia Reddellomyces_JT27723_Australia Reddellomyces_JT4985_Australia Reddellomyces_JT27724_Australia Reddellomyces_JT6873_Australia Choiromyces_alveolatus_97 Choiromyces_meandriformis_DL_Oregon Nothojafnia_cf_thaxterii_N10_Argentina Choiromyces_meandriformis_RH691_Iowa Tuber_sp_ITCV910_Mexico Tuber_sp_RH73_Iowa Tuber_aestivum_GB202_Italy Tuber_sp1_K201_Japan Tuber_sp2_K215_Japan Tuber_sp8_K228_Japan Tuber_sp9_K213_Japan Tuber_sp14_K186_Japan Tuber_gennadii_BM667_Spain Tuber_canaliculatum_OSC59072_West_Virginia Tuber_cf_borchii_China Tuber_indicum_A_GB236_China Tuber_indicum_A_GB240_China Tuber_sp_RH8270753_Iowa Tuber_regimontanum_ITCV909_Mexico_holotype Tuber_sp_ITCV908_Mexico Tuber_lyonii_GA21_Georgia Tuber_beyeleri_JT32597_Oregon Tuber_gibbosum_JT26632_Washington Tuber_gibbosum_JT30580_Oregon Tuber_oregonense_GB284_Oregon_holotype Tuber_oregonense_JT30493_Oregon_paratype Tuber_castellanoi_JT28069_California_holotype Tuber_bellisporum_JT11679_Oregon_holotype Tuber_brumale_GB21_Italy Tuber_brumale_GB22_Italy Tuber_canaliculatum_JT28215_New_Jersey Tuber_dryophilum_GB37_Italy Tuber_magnatum_GB12_Italy Tuber_magnatum_GB13_Italy Tuber_malacodermum_JT32319_Spain Tuber_melanosporum_GB200_Italy Tuber_mesentericum_CW105_Sweden Tuber_sp_JT13224_West_Virginia Tuber_spinoreticulatum_U188_Maryland_isotype Tuber_indicum_B_JT29410_Oregon Tuber_californicum_JT28058_California Tuber_lyonii_OSC58244_Texas Tuber_asa_M1828_Italy Tuber_gennadii_M1904_Italy Tuber_gennadii_JT9627_Spain_paratype Tuber_aestivum_JT30500_Sweden Tuber_borchii_GB1_Italy Tuber_borchii_GB14_Italy Tuber_nitidum_BM105_Spain Tuber_shearii_OSC51052_North_Carolina; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=1165; FORMAT DATATYPE=DNA MISSING=? GAP=- ; MATRIX [ 1 ] [ 1 2 3 4 5 6 7 8 9 0 1 ] [ 1 2 3 4 5 6 7 8 9 0 1 2 3 4 5 6 7 8 9 0 1 2 3 4 5 6 7 8 9 0 1 2 3 4 5 6 7 8 9 0 1 2 3 4 5 6 7 8 9 0 1 2 3 4 5 6 7 8 9 0 1 2 3 4 5 6 7 8 9 0 1 2 3 4 5 6 7 8 9 0 1 2 3 4 5 6 7 8 9 0 1 2 3 4 5 6 7 8 9 0 1 2 3 4 5 6 7 8 9 0 1 2 3 4 5 6 ] [ 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345] Helvella_macropus_MES198 ?????????????????????????????????????????????????????????????????AAG-TTAAGCAAAGATG-TCTAC-AAGTATTTGGAG-AAATGTGTTGAAACG-AGT-AAGGACTTCAACCTCACCCTGGCTGTCAAATCGAA-CACCATTACCAACGGGCTCAAGTACTCTCTGGCTACGGGCAATTGGGGTGAACAGAAAAAGGCAGCATCCTCCAAGGCAGGTGTTTCCCAGGTCTTGAACCGGTATACCTTTGCCTCTACTTTGTCGCATTTACGACGAACAAACACCCCAATTGGGAGAGACGGGAAAATTGCCAAACCTCGT-CAATTGCACAATACCCATTGGGGATTAGTCTGCCCCGCCGAGACCCCAGAAGGTCAAGCATGTGGGCTCGTCAAGAATTTATCGTTGATGTC-TTATATCACGATTGGTACACCCGGA-TATCCCTTGGTCGACTTTTTGTCATCTAATGATATGGAGCTGCTCGAAGAGTACGAGCCACAGC-GGTCGCCTAATGCCACCAAGGTTTTCGTTAATGGCGTCTGGGTCGG-CACCCACCGAGACCCACTCATGTTAGCCAAGGTTGTTCAAGATGTCAGAAGGCAGGGTGTCGTCAACCACGAAGTCAGCGTCATCCGGGACATCCGTGACAGAGAATTCAAGATATTT-ACGGATGCGGGACGAGTTTGCCGCCCTCTCTTCG-TGATTGATAATGATCCACGCAGCGAGAGAAGGGGACAACTTATGCTCCAGAAGGAACATATCGATAGACTTGAG-GACGATCATG-CGTTAAGTTCAGAGGACAAGTTCGGTTGGGAAGGCCTGCTGTTTGCCGGAGCTGTCGAATACCTAGA-TGCAGAAGAAGAGGA-AGGTGTCATGATTGTTATGACACCA-GAAGACCT-CGATCTCTCGAGGCAGGTACAATTGGGATACGAAATTGAACAAGAACAAGATCAAGGAAAGAGGGTGAAGGCGCC-GATTAACACTTCC-A-CGCACACATGGACCCACTGCGAGATCCACCCCAGT-ATGATCCTTGGAATATGCGCCAGCATCATTCCCTTCCCCGACCATAACCAGGTTAGTTCAACCCTACCCGCCTTGCATACTTAAATTCTAACCGCGC??????? [1141] Helvella_lacunosa_MES218 ?????????????????????????????????????????????????????ACTTTATGGA-AGAG-TTAAGCAAAGATG-TCTAT-AAGTACTTGGAA-AAATGTGTTGAAACG-AGC-AAGGACTTCAACCTCACCCTGGCTGTCAAATCAAA-CACTATCACCAACGGGCTCAAGTACTCTCTGGCTACTGGCAATTGGGGCGAACAGAAAAAGGCGGCATCCTCCAAGGCGGGTGTTTCCCAAGTCTTGAACCGGTATACTTTCGCCTCTACTTTGTCGCATTTACGACGAACAAACACCCCAATCGGGAGAGACGGGAAAATCGCCAAACCCCGT-CAATTGCACAATACCCACTGGGGATTGGTCTGCCCTGCCGAGACCCCAGAAGGTCAAGCGTGCGGGCTCGTCAAGAATTTATCGTTGATGTC-TTACATCACAATTGGTACACCCGGT-TATCCCTTGGTCGACTTTTTGTCATCCAATGACATGGAACTGCTCGAAGAGTACGAGCCACAGC-GGTCACCTAATGCTACCAAGGTTTTCGTTAATGGCGTTTGGGTCGG-CACTCACAGAGACCCGCTCATGTTAGCGAAGGTGGTTCAAGACGTCAGAAGGCAAGGTGTCGTCAACCATGAAGTCAGCGTCATCCGGGACATTCGGGACAGAGAGTTCAAAATATTT-ACGGATGCGGGACGAGTCTGTCGTCCCCTCTTCG-TAATTGATAATGACCCACGCAGCGAGAGAAGGGGACAACTCATGCTCCAGAAGGAACATATCGACAGACTTGAA-GACGATCACG-CGCTAAGTTCAGAGGAGAAGTTTGGTTGGGAAGGCCTGCTATTTGCCGGAGCTGTCGAATACCTAGA-TGCAGAAGAAGAGGA-AGGTGTCATGATTGTTATGACACCA-GAAGACCT-CGATCTCTCTAGGCAGGTACAGCTAGGGTACGAAATTGAGCAAGAAAAAGACCAAGGAAAGAGAGTGAAGGCGCC-GATTAACACTTCC-A-CGCACACATGGACACATTGTGAGATCCACCCCAGC-ATGATCCTTGGAATATGTGCCAGCATCATTCCGTTCCCCGACCATAATCAGGTTAGTTCTCCGCACCCGCTTTGCATATCAAATTCTAACCGCGTGGAAATACC [1140] Helvella_lacunosa_MES286 ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????CCTCACCCTGGCTGTCAAATCAAA-CACTATCACCAACGGACTCAAGTATTCTCTGGCTACCGGCAATTGGGGTGAACAGAAAAAGGCGGCATCCTCCAAGGCGGGTGTTTCCCAAGTCTTGAACCGGTATACTTTCGCCTCTACTTTGTCGCATTTACGACGAACAAACACCCCGATCGGGAGAGACGGGAAAATCGCCAAACCCCGT-CAATTGCACAATACCCACTGGGGATTGGTCTGCCCTGCCGAGACCCCAGAAGGTCAAGCATGCGGGCTCGTCAAGAATTTATCGTTGATGTC-TTATATCACAATTGGTACACCCGGT-TATCCCTTGGTCGACTTTTTGTCATCCAATGACATGGAACTGCTCGAAGAGTACGAGCCACAGC-GGTCACCTAATGCTACCAAGGTTTTCGTTAATGGCGTTTGGGTTGG-CACTCACAGAGACCCTCTCATGTTAGCGAAGGTAGTTCAAGATGTCAGAAGGCAGGGTGTCGTCAACCATGAAGTCAGCGTCATCCGGGACATTCGGGACAGAGAGTTCAAAATATTT-ACGGATGCGGGACGAGTCTGTCGTCCCCTCTTCG-TAATTGATAATGACCCACGCAGCGAGAGAAGGGGACAACTCATGCTCCAGAAGGAACATATCGACAGACTTGAA-GACGATCACG-CGCTAAGTTCAGAGGAGAAGTTTGGTTGGGAAGGCCTGCTATTTGCCGGAGCTGTCGAATACCTAGA-TGCAGAAGAAGAGGA-AGGTGTCATGATCGTTATGACACCA-GAAGACCT-CGATCTCTCGAGGCAGGTACAGCTAGGGTATGAAATTGAGCAAGAAAAAGACCAAGGAAAGAGAGTGAAGGCGCC-GATTAACACTTCC-A-CGCACACATGGACACACTGTGAGATCCACCCCAGC-ATGATCCTTGGAATATGTGCCAGCATCATTCCGTTCCCCGACCATAATCAGGTAAGTTCTCCGTACCCGCTTTGCATACCAAATTCTAACCGCG?????????? [1147] Helvella_acetabulum_MES215 ????????????????????????????????????????????????????TACTTTGTGGAAGAAG-TTAAGCAAAGATG-TCTAT-AAATACTTGGAA-AAATGTGTTGAAACG-AGC-AAGGACTTCAACCTCACCCTGGCTGTCAAGTCTAA-CACCATTACCAACGGGCTTAAGTATTCTCTGGCTACGGGCAATTGGGGCGAACAGAAAAAGGCGGCATCCTCCAAGGCAGGTGTTTCCCAGGTCTTGAACCGCTATACTTTCGCCTCTACTTTGTCGCATTTACGACGAACGAACACTCCAATTGGGAGAGACGGTAAAATTGCTAAACCTCGT-CAATTGCACAATACCCATTGGGGATTGGTCTGCCCTGCTGAGACTCCGGAAGGTCAGGCATGTGGGCTCGTCAAGAATTTATCGTTGATGTC-TTATATCACGATTGGTACACCCGGA-TATCCCTTGGTCGACTTTTTGTCATCCAATGACATGGAACTGCTCGAAGAATACGAGCCACAGC-GGTCGCCTAATGCTACCAAAGTTTTCGTTAATGGCGTATGGGTCGG-CACCCACCGAGACCCTCTCATGTTAGCCAAGGTGGTTCAAGATGTCAGAAGGCAGGGTGTCGTCAACCACGAAGTCAGCGTCATTCGGGACATCCGTGACAGAGAGTTCAAGATATTT-ACGGATGCGGGGCGAGTTTGCCGCCCTCTTTTCG-TGATTGATAATGACCCACGCAGTGAGAGAAGGGGACAACTTATGCTTCAGAAGGAACATATCGACAGACTTGAAAGACGATCACG-CGTTAAGTTCGGAGGAGAAGTTCGGTTGGGAAGGCCTGCTGTTTGCCGGAGCTGTCGAGTACCTAGA-TGCGGAGGAAGAGGA-AGGCGTCATGATTGTTATGACACCC-AGA?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1147] Balsamia_MES84 ?????????????????????????????????????????????????????????????????????????????GGATG-TCTAC-AAGTACTTGGAA-AAATGTGTCNAAACA-GGT-AAAGATTTCAACCTCACGCTCGCCGTTAAGTCGAA-CACCATTACCAACGGGCTTAAGTACTCTCTCGCTACGGGGAATTGGGGTGAGCAGAAAAAAGCGGCATCCTCTAAGGCGGGCGTTTCCCAAGTCTTGAACCGGTATACGTTTGCCTCCACCCTGTCACATTTGCGAAGAACAAATACTCCAATTGGGAGAGACGGGAAAATTGCTAAACCTCGC-CAATTACATAATACACATTGGGGTTTGGTTTGTCCTGCTGAAACCCCAGAAGGGCAGGCTTGCGGTCTCGTCAAGAACTTGTCATTGATGTC-TTATATCACTATTGGAACACCTGGA-TATCCTTTGGTTGACTTTTTGTCATCCAATGACATGGAATTGCTCGAGGAGTACGAGCCACAGC-GGTCGCCTAATGCCACCAAGGTTTTCGTCAATGGAGTTTGGGTTGG-CACCCATCGAGACCCACTCATGTTAGCCAAAGTGGTTCAAGACGTCAGGAGGCAAGGCGTCGTCAGCCACGAGGTCAGCGTCATCCGAGACATCCGGGACAGAGAGTTCAAAATTTTC-ACTGATGCCGGACGAGTTTGCCGCCCCCTGTTCG-TAATTGATAACGACCCACGAAGCGAGCGAAGAGGCCAGCTTATGCTACAGAAGGAGCACATCGAGAGGCTCGAA-GACGATCACA-CGCTAGGCCCAGATGAAAAGTTTGGTTGGGAAGGTTTATTGTATGCCGGGGCCGTCGAATATCTGGA-TGCGGAGGAAGAGGA-AGGTGTTATGATCGTGATGACACCC-GAAGACCT-CGACCTTTCCAGGCAAGTACTACTAGGATATGAAATCGAACAAGAAACCGACCAGGCAAAGAGGGTGAAGGCGCC-GATTAACACTTCT-A-CGCATACCTGGACGCACTGCGAGATTCACCCCAGC-ATGATCCTTGGGATATGCGCGAGCATCATTCCGTTCCCGGATCACAATCAGGTTAGTCTCCCACTCATGCGGCCCTGAAAACGCTCCCACTAATCA???????? [1142] Balsamia_SRC395 ??????????????????????????????????????????????????????????????????????????????????????????????CTTGGAA-AAATGTGTCGAAACG-GGT-AAAGATTTCaACCTTACGCTTGCCGTCNGGTCNAA-CACCATTACCAACGGGCTTAAGTACTCTCTCGCTACGGGGAATTGGGGTGAGCAGaAAaaAGCAGCATCCTCCAAGGCGGGCGTTTCCCAAGTCTTGAACCGGTATACGTTTGCCTCCACCTTGTCACATTTGCGAAGAACAAATACTCCAATTGGGAGGGACGGGAAAATTGCTAAACCTCGT-CAATTGCACAATACACATTGGGGTTTGGTTTGTCCTGCTGAAACCCCGGAAGGCCAGGCTTGCGGTCTCGTCAAGAACTTGTCATTGATGTC-TTATATCACTATTGGAACACCTGGA-TATCCTTTGGTTGACTTTTTGTCATCCAATGACATGGAATTGCTCGAGGAGTACGAGCCACAGC-GGTCGCCTAATGCCACTAAGGTTTTCGTCAATGGGGTTTGGGTCGG-CACCCACCGAGACCCGCTCATGTTAGCCAAAGTGGTCCAAGACGTCAGAAGGCAAGGCGTCGTCAGCCACGAGGTCAGCGTCATCCGGGACATCCGGGACAGGGAGTTCAAAATTTTC-ACTGATGCCGGACGAGTTTGCCGCCCCCTGTTCG-TAATTGATAACGACCCAAGAAGCGAGCGAAGAGGTCAGCTTATGNTACAGAAGGAGCATATCGAGAGGCTCGAA-GACGATCACA-CGCTAGGCCCGGATGAAAAGTTTGGTTGGGAAGGTTTATTGTATGCCGGGGCCGTCGAATATCTGGA-TGCGGAGGAAGAGGA-AGGTGTTATGATTGTGATGACGCCC-GAGGACCT-CGACCTTTCTAGGCAAGTGCTACTAGGATATGAAATCGAACAAGAAACCGACCAGGCAAAGAGGGTGAAGGCGCC-GATTAACACTTCT-A-CGCATACCTGGACGCACTGCGAGATTCACCCCAGC-ATGATCCTTGGGATATGTGCTAGCATCATTCCGTTCCCGGATCACAATCAGGTTAGCCCCCCCACCCATACGGCTTTGAAAACGCTCCCACTAATCACGAG??? [1144] Balsamia_SRC868 ????????????????????????????????????????????????????????????????????????????????TG-TCTAC-AAGTACTTGGAA-AAATGTGTCGAAACA-GGT-AAAGATTTCAACCTCACGCTCGCCGTTAAGTCNAA-CACCATTACCAACGGGCTTAAGTACTCTCTCGCTACGGGGAATTGGGGTGAGCAGAAAAAAGCGGCATCCTCCAAGGCGGGCGTTTCCCAAGTCTTGAACCGGTATACGTTTGCCTCCACCCTGTCACATTTGCGAAGAACAAATACTCCAATTGGGAGGGACGGGAAAATTGCTAAACCTCGC-CAATTACATAATACACATTGGGGTTTGGTTTGTCCTGCTGAAACCCCAGAAGGGCAGGCTTGCGGTCTCGTCAAGAACTTGTCATTGATGTC-TTATATCACTATTGGAACACCTGGA-TATCCTTTGGTTGACTTTTTGTCATCCAATGACATGGAATTGCTCGAGGAGTACGAGCCACAGC-GGTCGCCTAATGCCACCAAGGTTTTCGTCAATGGAGTTTGGGTTGG-CACCCATCGAGACCCACTCATGTTAGCCAAAGTGGTTCAAGACGTCAGGAGGCAAGGCGTCGTCAGCCACGAGGTCAGCGTCATCCGAGACATCCGGGACAGAGAGTTCAAAATTTTC-ACTGATGCCGGACGAGTTTGCCGCCCCCTGTTCG-TAATTGATAACGACCCACGAAGCGAGCGAAGAGGCCAGCTTATGTTACAGAAGGAGCACATCGAGAGGCTCGAA-GACGATCACA-CGCTAGGCCCAGATGAAAAGTTTGGTTGGGAAGGTTTATTATATGCCGGGGCCGTCGAATATCTGGA-TGCGGAGGAAGAGGA-AGGTGTTATGATCGTGATGACACCC-GAAGACCT-CGACCTTTCCAGGCAAGTACTACTAGGATATGAAATCGAACAAGAAACCGACCAGGCAAAGAGGGTGAAGGCGCC-GATTAACACTTCT-A-CGCATACCTGGACGCATTGCGAGATTCACCCCAGC-ATGATCCTTGGGATATGCGCGAGCATCATTCCGTTCCCGGATCACAATCAGGTTAGTCTCCCACTCATGCGGCCCTGAAAACGCTC?????????????????? [1142] Underwoodia_singeri_mes161_Chile ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????aagcggcatcTTCCAAAGcTGGTGTCTCTCAAGTGTTGAACCGATACACATTTGCGTCTACATTGTCCCATTTACGACGGACAAATACACCCATTGGCAGAGACGGGAAAATTGcGAAGCCCCGC-CAACTACATAATACCCACTGGGGATTGGTTTGCCCGGCAGAAACACCCGAAGGTCAGGCTTGCGGTCTTGTCAAGAATCTATCTTTGATGTC-TTATATCACGATCGGCACTCCCGGG-TACCCTTTGGTTGACTTCCTGTCATCCAACGACATGGAGCTATTAGAGGAGTATGAACCGCAAAAGGTCGCCCAATGCTACCAAGGTCTTCGTCAACGGGGTCTGGGTTGGGCACTCACCGTGACCCTTTCATGCTAGCCAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTCGTCAGCCACGAAGTCAGTGTCATTCGTGACATCCGAGACAGGGAATTCAAGATATTY-ACTGATGCTGGACGAGTTTGCCGTCCACTTTTTG-TTATCGACAACGACCCCCGCAGCGAGCGACGAGGACAGCTCGTACTACAGAAGGAGCATATAGAAAAACTTGAA-GATGACCACC-AGCTAGATGTAGAAGATAGGTTTGGCTGGGAAGGCTTACTCTTTGCTGGGGCCGTTGAATATCTTGA-TGCAGAGGAGGAGGAAGG-TGTTATGATTGTCATGACACCT-GAGGATCTTG-ATTTGTCTAGACAGGTTCAGCTGGGTTATGAAATTGAGCAAGAAACCGACCAGGCAAAGAGAGTAAAAGCGCC-GATCAATTCTACC-A-CTCATACATGGACGCATGGTGAGATTCATCCAAGT-ATG????????????????????????????????????????????????????????????????????????????????????????????????????? [1150] Underwoodia_beatonii_JT28380_Australia ????????????????????????????????????????????????????????????????????????????????????????????????????????AAGTGCGTGGAAACGAGCANGGACTTCAATCTTACTTTGGCCGTCAAATCAAA-CACTATTACCAATGGACTGAAATACTCTCTGGCGACAGGTAACTGGGGCGAGCAAAAAAAAGCGGCGTCTTCCAAAGCCGGTGTCTCTCAAGTGTTGAACCGATACACATTTGCGTCTACTTTGTCCCACTTACGGCGGACAAATACACCCATCGGCAGAGACGGGAAAATTGCGAAGCCCCGC-CAACTACACAATACCCATTGGGGATTAGTTTGCCCGGCAGAAACGCCCGAAGGTCAGGCTTGCGGTCTTGTCAAGAATCTGTCTTTGATGTC-TTATATCACGATCGGCACTCCCGGA-TATCCCTTGGTAGACTTTCTGTCATCCAACGACATGGAGCTATTAGAGGAGTATGAACCGCAAA-GGTCGCCCAATGCTACTAAGGTCTTCGTCAATGGAGTCTGGGTTGG-CACTCACCGTGACCCTCTCATGCTAGCCAAGGTTGTTCAAGATGTGCGACGGCAAGGTGTTGTCAGCCACGAAGTCAGTGTCATTCGTGACATCCGAGACAGAGAATTCAAGATATTC-ACTGATGCTGGACGAGTTTGCCGTCCACTTTTCG-TTATCGACAACGACCCCCGCAGTGAACGACGAGGACAGCTCGTTCTACAGAAGGAGCATATAGAAAAGCTCGAA-GATGACCACC-AGCTAGATGTAGAAGATAGGTTTGGCTGGGAAGGCTTACTCTTTGCTGGGGCCGTTGAATATCTTGA-TGCAGAGGAGGAGGAAGG-TGTTATGATTGTCATGACACCT-GAGGATCTTG-ATTTGTCTAGACAGGTTCAGCTGGGTTATGAAATTGAGCAGGAAACCGACCAGGCAAAGAGAGTAAAAGCGCC-AATCAATTCCACC-A-CCCATACGTGGACGCATTGCGAGATTCATCCAAGT-ATGATACTCGGGATCTGTGCTAGTATCATTCCGTTTCCAGATCACAATCAGGTATGTCTACTGGATG????????????????????????????????????? [1147] Gymnohydnotrya_australiana_JT19760 ????????????????????????????????????????????????????????????TGGAGAAAGCTTACGAAGGATG-TCTAC-AAATATTTAGAA-AAATGCGTGGAAACG-AGCAA-GGACTTCAATCTTACCTTGGCCGTCAAATCAAA-CACTATCACCAACGGATTAAAATACTCTTTGGCGACAGGTAACTGGGGCGAGCAAAAAAAAGCGGCGTCTTCCAAGGCCGGTGTCTCTCAAGTGTTGAACCGATACACATTTGCGTCTACTTTGTCCCATTTGCGACGGACAAATACACCCATTGGCAGGGACGGGAAAATTGCGAAGCCCCGC-CAACTGCATAATACCCATTGGGGATTGGTTTGCCCGGCAGAAACACCCGAAGGTCAGGCTTGCGGTCTTGTCAAGAATTTGTCTTTGATGTC-TTATATCACGATCGGCACTCCCGGG-TACCCCTTGGTTGACTTCCTGTCATCCAACGACATGGAGCTATTAGAGGAGTATGAACCACAAA-GGTCGCCTAATGCTACCAAGGTCTTCGTCAACGGAGTCTGGGTTGG-CACTCACCGTGATCCTCTCATGCTAGCCAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTGGTCAGCCACGAAGTCAGTGTCATTCGTGACATCCGAGACAGAGAATTCAAGATATTC-ACTGATGCTGGACGAGTTTGCCGTCCACTTTTCG-TTATCGACAACGACCCACGCAGCGAGCGACGAGGACAGCTCGTACTACAGAAGGAGCATATAGAAAAACTTGAA-GATGACCACC-AGCTAGATGTAGAAGATAGGTTTGGCTGGGAAGGTTTACTCTTTGCTGGGGCCGTTGAATATCTTGA-TGCGGAGGAGGAGGAAGG-TGTTATGATTGTCATGACACCG-GAGGATCTTG-ATTTGTCTAGACAGGTTCAGCTGGGTTATGAAATTGAGCAGGAAACGGACCAGGCAAAGAGAGTAAAGGCGCC-GATCAATTCTACC-A-CCCATACGTGGACGCATTGCGAGATTCATCCAAGT-ATGATACTCGGGATCTGTGCTAGTATCATTCCATTTCCAGATCACAATCAGGTATGTCTACTGGAAGTCTATCGGAAAGCGCATACTCTA?????????????? [1142] Gymnohydnotrya_australiana_OSC130601 ???????????????????????????????????TTGGCTGGNNTTTNCNGTACCCTYTGGNANAAAGCTTACGAAGGATG-TCTAC-AAATATTTAGAA-AAATGCGTGGAAACG-AGCNAAGGACTTCaATCTTACCTTGGCCGTCAAATCAAA-CACTATCACCAACGGATTAAAATACTCTTTGGCGACAGGTAACTGGGGCGAGCAAAAAAAAGCGGCGTCTTCCAAGGCCGGTGTCTCTCAAGTGTTGAACCGATACACATTTGCGTCTACTTTGTCCCATTTGCGACGGACAAATACACCCATTGGCAGGGACGGGAAAATTGCGAAGCCCCGC-CAACTGCATAATACCCATTGGGGATTGGTTTGCCCGGCAGAAACACCCGAAGGTCAGGCTTGCGGTCTTGTCAAGAATTTGTCTTTGATGTC-TTATATCACGATCGGCACTCCCGGG-TACCCCTTGGTTGACTTCCTGTCATCCAACGACATGGAGCTATTAGAGGAGTATGAACCACAAA-GGTCGCCTAATGCTACCAAGGTCTTCGTCAACGGAGTCTGGGTTGG-CACTCACCGTGATCCTCTCATGCTAGCCAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTGGTCAGCCACGAAGTCAGTGTCATTCGTGACATCCGAGACAGAGAATTCAAGATATTC-ACTGATGCTGGACGAGTTTGCCGTCCACTTTTCG-TTATCGACAACGACCCACGCAGCGAGCGACGAGGACAGCTCGTACTACAGAAGGAGCATATAGAAAAACTTGAA-GATGACCACC-AGCTAGATGTAGAAGATAGGTTTGGCTGGGAAGGTTTACTCTTTGCTGGGGCCGTTGAATATCTTGAATGCGGAGGAGGAGGAANGGTGTTATGATTGTCATGACACCG-GAGGATCTTNGATTTGTCTAGACAGGTTCAGCTGGGTTATGAAATTGARCAGGAAACGGACCAGGCAAAGAGAGTAAAGGCGCCCGATCAATTCTACNCACCCNATACGTGGACGCATTGCGAGATTCATCCAAGT-ATGATACTCGGGATCTGTGCTAGTATCATTCCATTTCCAGATCACAATCAGGTATGTCTACTGGAAGTCTATCGGAAAGCGC?????????????????????? [1149] Labyrinthomyces_JT27750_Australia ???????????????????????????????????????????????TTTCGCACCCTGTGGAGAAAA-CTCACGAAAGACG-TCTAC-AAATATCTGGAG-AAATGTGTCGAGACT-AGT-AAAGATTTCAATCTGACCTTAGCCGTCAAATCTAA-CACTATCACCAATGGCCTAAAATATTCTCTCGCGACAGGTAACTGGGGTGAACAAAAGAAAGCAGCGTCTTCCAAGGCAGGTGTCTCTCAGGTGTTGAACCGGTATACCTTTGCCTCCACCCTCTCTCATCTACGGCGCACCAATACCCCTATTGGCAGAGACGGTAAAATTGCAAAACCCCGC-CAGTTGCATAACACCCATTGGGGATTGGTCTGCCCAGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTCAAAAACTTATCTTTGATGTC-TTATATCACTATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGACATGGAACTACTTGAGGAATATGAGCCTCAGC-GCTCTCCCAATGCGACCAAGGTTTTCGTCAACGGGGTTTGGGTTGG-AACTCACCGCGACCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGCGTTATCCGTGATATCCGAGACAGGGAGTTCAAGATTTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTATTCG-TTATCGACAATGATCCTCGTAGTGAGCGACGAGGACAGCTCGTTCTACAGAAAGAGCATATAGAAAAACTTGAA-GATGATCATC-AACTAGAAATAGAGGACAGATTTGGTTGGGAAGGTTTACTCTTCGCAGGAGCTGTTGAGTATCTTGA-TGCGGAGGAAGAAGA-GGGCGTTATGATTGTTATGACGCCT-GAAGATCT-CGATTTGTCGAGACAGGTTCAATTGGGCTATGAAATTGAACAGGAAACCGACCAGGCCAAGAGGGTGAAAGCACC-GATCAATTCTACG-A-CCCATACCTGGACACATTGCGAAATTCATCCAAGT-ATGATTCTTTGAATCTGTGCCAGTATCATACCGTTCCCCGATCATAATCAGGTATGTTTTG??????????????????????????????????????????? [1141] Labyrinthomyces_JT28821_Australia ??????????????????????????????????????????GACTTTTTCGCACCCTGTGGAG-AAA-CTCACGAAAGATG-TCTAC-AAATATCTGGAG-AAATGTGTCGAGACT-AGT-AAAGATTTCAATCTGACCTTAGCCGTCAAATCTAA-CACTATCACCAATGGCCTAAAATATTCTCTCGCGACAGGTAACTGGGGTGAACAAAAGAAAGCAGCGTCTTCCAAGGCAGGTGTCTCTCAGGTGTTGAACCGGTATACCTTTGCCTCCACCCTCTCTCATCTACGGCGCACCAATACCCCTATTGGCAGAGACGGTAAAATTGCAAAACCCCGC-CAGTTGCATAACACCCATTGGGGATTGGTCTGCCCAGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTCAAAAACTTATCTTTGATGTC-TTATATCACTATTGGCACTCCTGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGACATGGAACTACTTGAGGAATATGAGCCTCAGC-GCTCTCCCAATGCGACCAAGGTTTTCGTCAACGGGGTTTGGGTTGG-AACTCACCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGCGTTATCCGTGATATCCGAGACAGAGAGTTCAAGATTTTT-ACAGACGCGGGGCGGGTTTGCCGTCCGCTATTCG-TTATCGACAATGATCCTCGTAGTGAGCGACGAGGACAGCTCGTTCTACAGAAAGAGCATATAGAAAAACTTGAA-GATGATCATC-AACTAGAAATAGAGGACAGATTTGGTTGGGAAGGTTTACTCTTCGCAGGAGCTGTTGAGTATCTTGA-TGCGGAGGAAGAAGA-GGGCGTTATGATTGTTATGACGCCT-GAAGATCT-CGATTTGTCGAGACAGGTTCAATTGGGCTATGAAATTGAACAGGAAACCGACCAGGCCAAGAGGGTGAAAGCACC-GATCAATTCTACG-A-CCCATACCTGGACACATTGCGAAATTCATCCAAGTA-TGATTCTT-GCATCTGTGCCAGTATCATACCATTCCCCGATCATAATC??????????????????????????????????????????????????????? [1139] Dingleya_JT31575_Australia ???????????????????????????????????????????????????????????????????A-CTCACGAAAGACG-TCTAC-AAATATCTGGAG-AAATGTGTCGAGACT-AGT-AAAGATTTCAATCTGACCTTAGCCGTCAAGTCTAA-CACTATTACCAATGGCCTAAAATATTCTCTCGCGACAGGTAACTGGGGCGAACAAAAGAAAGCAGCGTCTTCCAAGGCGGGTGTCTCTCAGGTGTTGAACCGGTATACCTTTGCCTCCACCCTCTCTCATCTACGGCGCACCAATACCCCTATTGGCAGAGACGGTAAAATTGCAAAACCCCGC-CAGTTGCATAACACCCATTGGGGACTGGTTTGCCCAGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTCAAAAACTTATCTTTGATGTC-TTATATCACTATTGGCACTCCTGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAGTTACTTGAAGAATATGAGCCTCAGC-GCTCTCCGAATGCGACCAAGGTTTTCGTCAATGGGGTTTGGGTTGG-AACTCACCGCGACCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGGAGGCAAGGTGTTGTCAGCCACGAAGTTTGCGTCATCCGTGATATCCGAGACAGAGAGTTCAAGATTTTT-ACGGATGCGGGGCGGGTTTGCCGTCCACTATTCG-TTATCGACAATGATCCTCGTAGTGAGCGACGAGGACAGCTCGTTCTACAGAAAGAGCATATAGAAAAGCTTGAA-GATGATCATCAAACTAGAAATAGAGGACAGATTTGGTTGGGAAGGTTTACTCTTCGCAGGAGCTGTTGACTATCTTGA-TGCGGAGGAAGAAGA-GGGCGTTATGATTGTTATGACGCCT-GAAGATCT-CGATTTGTCGAGACAGGTTCAATTGGGCTATGAAATTGAACAGGAAACCGACCAGGCCAAGAGGGTGAAAGCACC-GATCAATTCTACG-A-CCCATACCTGGACACATTGCGAAATTCATCCAAGT-ATGATTCTTGGAATTTGTGCCAGTATCATACCGTTCCCCGATCATAATCAGGTATGTTT-T??????????????????????????????????????????? [1141] Reddellomyces_JT27723_Australia ??????????????????????????????????????????GACTTTTTCGCACCCTGTGGAG-AAA-CTCACGAAAGACGTT?TCC-AAATATCTGGAG-AAATGTGTCGAGACT-AGT-AAAGATTTCAATCTGACCTTAGCCGTCAAGTCTAA-CACTATCACCAATGGCCTAAAATATTCTCTCGCGACAGGTAACTGGGGTGAACAAAAGAAGGCAGCGTCTTCCAAGGCAGGTGTCTCTCAGGTGTTGAACCGGTATACCTTTGCCTCCACCCTCTCTCATCTACGGCGCACCAATACCCCTATTGGCAGAGACGGTAAAATTGCAAAACCCCGC-CAGTTGCATAACACCCATTGGGGACTGGTCTGCCCAGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTCAAAAACTTGTCTTTGATGTC-TTATATCACTATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGACATGGAATTACTTGAGGAATATGAGCCTCAGC-GCTCTCCCAATGCGACCAAGGTTTTCGTCAATGGGGTTTGGGTTGG-AACTCACCGCGACCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGCGTTATCCGTGATATCCGAGACAGAGAGTTCAAGATTTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTATTCG-TTATCGACAATGATCCTCGTAGTGAGCGACGAGGACAGCTCGTTCTACAGAAAGAGCATATAGAAAAACTTGAA-GATGATCATC-AACTAGAAATAGAGGACAGATTTGGTTGGGAAGGTTTACTCTTCGCAGGAGCTGTTGAGTATCTTGA-TGCGGAGGAGGAAGA-GGGCGTTATGATTGTTATGACGCCT-GAAGATCT-CGATTTGTCGAGACAGGTTCAATTGGGCTATGAAATTGAACAGGAAACCGACCAGGCCAAGAGGGTGAAAGCACC-GATCAATTCTACG-A-CCCATACCTGGACACATTGCGAAATCCATCCAAGT-ATGATTCTTGGAATCTGTGCCAGTATCATACCGTTCCCCGATCATAATCAGGTATGTTT-T??????????????????????????????????????????? [1140] Reddellomyces_JT4985_Australia ?????????????????????????????????????????????????????????????????????CTCACGAAAGATG-TCTAC-AAATATCTGGAG-AAATGTGTCGAGACT-AGT-AAAGATTTCAATCTGACCTTAGCCGTCAAATCTAA-CACTATCACCAATGGCCTAAAATATTCTCTCGCGACAGGTAACTGGGGTGAACAAAAGAAAGCAGCGTCTTCCAAGGCAGGTGTCTCTCAGGTGTTGAACCGGTATACCTTTGCCTCCACCCTCTCTCATCTACGGCGCACCAATACCCCTATTGGCAGAGACGGTAAAATTGCAAAACCCCGC-CAGTTGCATAACACCCATTGGGGATTGGTCTGCCCAGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTCAAAAACTTATCTTTGATGTC-TTATATCACTATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGACATGGAACTACTTGAGGAATATGAGCCTCAGC-GCTCTCCCAATGCGACCAAGGTTTTCGTCAACGGGGTTTGGGTTGG-AACTCACCGCGACCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGCGTTATTCGTGATATCCGAGACAGAGAGTTCAAGATTTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTATTCG-TTATCGACAATGATCCTCGTAGTGAGCGACGAGGACAGCTCGTTCTACAGAAAGAGCATATAGAAAAACTTGAA-GATGATCATC-AACTAGAAATAGAGGACAGATTTGGTTGGGAAGGTTTACTCTTCGCAGGAGCTGTTGAGTATCTTGA-TGCGGAGGAAGAAGA-GGGCGTTATGATTGTTATGACGCCT-GAAGATCT-CGATTTGTCGAGACAGGTTCAATTGGGCTATGAAATTGAACAGGAAACCGACCAGGCCAAGAGGGTGAAAGCACC-GATCAATT?TACG-A-CCCATACCTGGACACATTGCGAAATTCATCCAAGTA-TGATTCTTGGAAT?????????????????????????????????????????????????????????????????????????????????????????? [1142] Reddellomyces_JT27724_Australia ??????????????????????????????????????????????????????????????????????????????????????????AATATCTGGAG-AAATGTGTCGAGACT-AGT-AAAGATTTCAATCTGACCTTAGCCGTCAAGTCTAA-CACTATCACTAATGGTCTAAAATATTCTCTCGCGACAGGTAACTGGGGCGAACAAAAGAAAGCAGCGTCTTCCAAGGCAGGTGTCTCTCAGGTGCTGAACCGGTATACCTTTGCCTCCACCCTCTCTCATCTACGGCGCACCAATACCCCTATCGGCAGAGACGGTAAAATTGCAAAACCTCGC-CAGTTGCATAACACCCATTGGGGACTGGTTTGCCCAGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTCAAAAACTTATCTTTGATGTC-TTATATCACTATTGGCACTCCTGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAATTACTTGAAGAATATGAGCCTCAGC-GCTCTCCGAATGCGACTAAGGTTTTCGTCAACGGGGTTTGGGTTGG-AACTCACCGCGACCCTCTTATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTTAGCCACGAAGTTAGCGTCATCCGTGATATCCGAGACAGAGAGTTCAAGATTTTT-ACAGATGCCGGGCGGGTTTGCCGTCCGCTATTCG-TTATCGACAATGATCCTCGTAGTGAGCGACGAGGACAGCTCGTTCTACAGAAAGAGCATATAGAAAAA????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1154] Reddellomyces_JT6873_Australia ???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GCAGCGTCTTCCAAGGCTGGTGTCTCTCAGGTGCTGAACCGGTATACCTTTGCCTCCACCCTCTCTCATCTACGACGCACCAATACCCCTATCGGCAGAGACGGTAAAATTGCAAAACCCCGC-CAGTTGCATAACACCCATTGGGGACTGGTTTGCCCAGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTCAAAAACTTATCTTTGATGTC-TTATATCACTATTGGCACTCCTGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAATTACTTGAAGAATATGAGCCTCAGC-GCTCCCCGAATGCGACTAAGGTTTTCGTCAACGGGGTTTGGGTTGG-AACTCACCGCGACCCTCTTATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTTAGCCACGAAGTTAGCGTCATCCGTGATATCCGAGACAGAGAGTTCAAGATTTTT-ACAGATGCCGGGCGGGTTTGCCGTCCGCTATTCG-TTATCGACAATGATCCTCGTAGTGAGCGACGAGGACAGCTCGTTCTACAGAAAGAGCATATAGAAAAACTTGAA-GATGA????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1157] Choiromyces_alveolatus_97 ??????????????????????????????????????????????????????????????????????????????????????????????????CTG-ATGGGC??C?AGCCA-TG----GGATTTCAATCTGACTTTAGCCGTCAAGTCTAA-CACTATCACCAATGGTCTGAAATATTCTTTGGCAACAGGTAACTGGGGCGAACAAAAGAAAGCAGCATCTTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGATATACCTTTGCCTCCACCCTCTCTCATCTACGGCGCACCAATACCCCTATCGGCAGAGACGGAAAAATAGCAAAGCCCCGT-CAGTTGCATAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGGCAAGCCTGCGGCCTTGTCAAAAACTTGTCTCTGATGTC-CTATATCACTATTGGCACTCCCGGA-TACCCCTTAGTTGACTTTTTGTCGTCTAATGATATGGAATTACTTGAGGAATATGAGCCTCAGC-GGTCTCCGAATGCCACTAAAGTTTTCGTCAACGGGGTCTGGGTTGG-AACTCACCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAGGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTCAGTGTCATCCGTGATATCCGAGACAGAGAGTTCAAGATCTTT-ACGGATGCGGGGCGGGTTTGCCGTCCGCTTTTTG-TTATCGACAACGACCCTCGTAGCGAGCGACGAGGACAGCTCGTTCTGCAGAAGGAGCATATAGAAAAACTTGAA-GATGATCATC-AACTAGAAATAGAGGATAGATTTGGCTGGGAAGGTCTACTTTTTGCAGGAGCTGTGGAGTATCTTGA-TGCAGAAGAAGAAGA-GGGTGTTATGATTGTCATGACACCT-GAAGATCT-CGATTTGTCGCGACAGGTTCAATTGGGCTATGAGA?TGAACAGGAAACCGACCAGGCCAAGAGGGTGAAAGCGCC-GATCAATTCTACG-A-CTCATACCTGGACACATTGCGAGATTCATCCAAGTAATGATTCTT-GAATCTGTGCCAGTATTATTCCGTTCCCCGACCATAATCAGTATG--TTCT??????????????????????????????????????????? [1139] Choiromyces_meandriformis_DL_Oregon ???????????????????????????GGCCCCTGCTAGCAGGACTTTTCCGGACTCTTTGGAG-AAA-CTCACGAAAGACG-TCTAC-AAATATCTGGAG-AAATGTGTCGAGACC-AGT-AAAGATTTCAATCTGACTTTAGCCGTTAAGTCTAA-CACTATCACCAATGGTCTAAAATATTCTTTGGCAACCGGTAACTGGGGAGAACAAAAGAAAGCAGCGTCTTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGATATACCTTTGCCTCCACCCTCTCTCATCTACGGCGCACCAATACCCCTATCGGCAGAGACGGAAAAATAGCAAAGCCCCGT-CAGTTGCATAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGGCAAGCCTGCGGCCTTGTCAAAAACTTGTCTTTGATGTC-CTATATCACTATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCTAATGATATGGAATTACTTGAGGAATATGAGCCTCAGC-GGTCTCCGAATGCCACTAAGGTTTTCGTCAACGGGGTCTGGGTTGG-AACGCACCGCGATCCTCTGATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGCGTGGTTAGCCACGAAGTCAGTGTCATCCGTGATATCCGAGACAGAGAGTTCAAGATCTTT-ACGGATGCGGGGCGGGTTTGCCGTCCGCTTTTCG-TTATCGACAACGACCCTCGTAGCGAGCGACGAGGACAGCTCGTTCTGCAAAAGGAGCATATAGAAAAACTCGAA-GATGATCATC-AACTAGAAATAGAGGATAGATTTGGCTGGGAAGGTCTGCTTTTTGCAGGAGCTGTTGAATATCTTGA-TGCAGAAGAAGAGGA-AGGTGTTATGATTGTCATGACACCT-GAAGATCT-CGATTTGTCTCGACAGGTTCAATTGGGCTATGAGATTGAACAGGAAACCGACCAGGCCAAGAGGGTGAAAGCACC-GATCAATTCTACG-A-CTCATACCTGGACACATTGCGAGATTCATCCAAGT-ATGATTCTTGGAATCTGTGCCAGTATTATTCCGTTCCCCGACCATAATCAGGTAGGTTC-T??????????????????????????????????????????? [1139] Nothojafnia_cf_thaxterii_N10_Argentina ??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GCCCAGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTCAAAAACTTGTCTTTGATGTC-TTATATCACTATTGGCACTCCCGGT-TACCCCTTGGTTGACTTTCTGTCGTCTAACGATATGGAATTACTTGAAGAATATGAGCCTCAGC-GTTCTCCGAATGCGACCAAGGTTTTCGTCAACGGGGTTTGGGTTGG-AACTCACCGCGACCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGTCATGAAGTTAGCGTCATCCGCGATATTCGAGACAGAGAGTTCAAGATTTTTTACAGATGCGGGGCGGGTTTGCCGTCCGCTATTCG-TTATC???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1160] Choiromyces_meandriformis_RH691_Iowa ????????????????????????????????????????????????????????TTTTGGAGAAAA-CTCACGAAAGACG-TCTAC-AAATATCTGGAG-AAATGTGTCGAGACC-AGT-AAAGATTTCAATCTGACTTTAGCCGTCAAGTCTAA-CACTATCACCAATGGTCTAAAATATTCTTTGGCAACCGGTAACTGGGGAGAACAAAAGAAAGCAGCGTCTTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGATATACCTTTGCCTCCACCCTCTCTCATCTACGGCGCACCAATACCCCTATCGGCAGAGACGGAAAAATAGCAAAGCCCCGT-CAGTTGCATAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGGCAAGCCTGCGGCCTTGTCAAAAACTTGTCTTTGATGTC-CTATATCACTATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCTAATGATATGGAATTACTTGAGGAATATGAGCCTCAGC-GGTCTCCGAATGCCACTAAGGTTTTCGTCAACGGGGTCTGGGTTGG-AACCCACCGCGATCCTCTGATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGCGTGGTTAGCCACGAAGTCAGTGTCATCCGTGATATCCGAGACAGAGAGTTCAAGATCTTT-ACGGATGCGGGGCGGGTTTGCCGTCCGCTTTTCG-TTATCGACAACGACCCTCGTAGCGAGCGACGAGGACAGCTCGTTCTGCAAAAGGAGCATATAGAAAAACTCGAA-GATGATCATC-AACTAGAAATAGAGGATAGATTTGGCTGGGAAGGTCTGCTTTTTGCAGGAGCTGTTGAATATCTTGA-TGCAGAAGAAGAGGA-AGGTGTTATGATTGTCATGACACCT-GAAGATCT-CGATTTGTCTCGACAGGTTCAATTGGGCTATGAGATTGA????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1145] Tuber_sp_ITCV910_Mexico ??????????????????????????????????????????????????????????????????????TCACGAAGGATG-TCTAC-AAATATCTGGAG-AAATGTGTTGAAACC-AGC-AAGGATTTCAATCTGACTTTAGCTGTTAAGTCTAA-CACGATCACCAATGGCCTAAAATATTCTTTGGCAACGGGTAATTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCACAGGTGTTAAACCGGTATACCTTTGCCTCTACTCTCTCTCATCTACGGCGCACCAATACCCCTATCGGTAGAGACGGGAAAATCGCAAAGCCCCGC-CAGTTGCACAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTGAAAAACCTGTCTCTGATGTC-TTATATTACGATTGGTACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAACTGCTTGAAGAATATGAGCCCCAGC-GGTCTCCCAATGCTACCAAGGTTTTTGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAGGGTGTTGTCAGCCACGAAGTAAGCGTCATTCGTGATATCCGAGACAGAGAGTTCAAGATCTTT-ACAGATGCGGGACGAGTTTGCCGTCCGCTCTTCG-TTATTGATAACGACCCTCGCAGTGAGCGACGAGGACAGCTCGTCCTGCAAAAGGAGCATATAGAAAAGCTCGAA-GACGATCATC-AGCTAGATATAGAGGACAGATTTGGCTGGGAAGGGTTACTCTTTGCAGGAGCTGTTGAGTATCTTGA-TGCAGAGGAAGAAGA-AGGTGTTATGATTGTCATGACACCT-GAGGATCT-TGATTTGTCAAGACAGGTTCAGCTGGGTTATGAGATTGAACAGGAAACCGACCAAGCCAAGAGGGTAAAAGCCCC-AATCAATTCTACG-A-CTCACACCTGGACACACTGTGAAATCCATCCAAGT-ATGATTCTTGGAATCTGCGCTAGTATTATTCCGTTCCCTGACCATAATCAAGTATGTTCCT??????????????????????????????????????????? [1142] Tuber_sp_RH73_Iowa ???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????TTTCTGACTTTGGCTGTTAAGTCTAA-CACTATCACCAATGGTCTAAAATATTCTTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAGGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGCACCAATACTCCTATCGGTAGAGACGGGAAAATCGCAAAGCCCCGC-CAGTTGCACAATACCCATTGGGGATTGGTATGTCCGGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTAAAAAACCTGTCTCTGATGTC-TTATATTACGATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAATTGCTTGAAGAATATGAACCTCAGC-GGTCTCCCAATGCTACCAAGGTTTTTGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTCGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGCGTCATTCGTGATATCCGAGACAGAGAGTTCAAGATCTTT-ACAGATGCGGGGCGGGTCTGCCGTCCGCTTTTCG-TTATTGACAACGACCCTCGTAGTGAGCGACGAGGACAACTCGTCCTGCAGAAAGAGCATATAGAAAAGCTCGAA-GACGATCACC-AACTAGATATAGAGGACAGATTTGGCTGGGAAGGTCTACTCTTTGCAGGAGCTGTTGAGTATCTTGA-TGCAGAGGAAGAAGA-AGGTGTTATGATTGTCATGACACCT-GAGGATCT-CGATTTGTCAAGACAGGTTC?AC????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1151] Tuber_aestivum_GB202_Italy ?????????????????????????????????TTTGGGCAGGGCTTTTCCGGACTCTTTGGAGAAAG-CTCACTAAGGATG-TCTAC-AAATATCTGGAG-AAATGCGTTGAAACC-AGC-AAAGATTTCAATCTGACTTTGGCTGTCAAGTCTAA-CACTATTACTAATGGCCTAAAATATTCTCTGGCAACAGGTAACTGGGGCGAACAAAAGAAAGCGGCCTCTTCCAAGGCGGGTGTGTCTCAAGTATTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATTTACGGCGCACCAATACTCCTATCGGCAGAGACGGGAAAATTGCGAAGCCCCGC-CAGTTGCACAATACCCATTGGGGGCTGGTGTGCCCGGCCGAAACACCCGAAGGGCAGGCCTGCGGTCTTGTAAAAAACCTGTCTCTGATGTC-TTATATCACAATTGGCACTCCTGGG-TATCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAATTACTCGAGGAATATGAACCTCAGC-GGTCTCCCAATGCTACTAAGGTTTTCGTTAATGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAGGGTGTTGTCAGCCACGAAGTCAGCGTCATTCGTGATATCCGGGATAGAGAGTTCAAAATCTTC-ACAGATGCGGGGCGAGTTTGCCGTCCGCTTTTCG-TTATCGACAACGACCCCCGTAGCGAGCGACGAGGGCAGCTCGTCCTGCAAAAGGAGCATATAGAGAAGCTCGAA-GACGATCATC-AATTAGATATAGAGGACAGGTTTGGCTGGGAAGGCCTACTCTTTGCTGGAGCTGTTGAGTATCTTGA-TGCAGAGGAGGAGGA-AGGTGTTATGATTGTTATGACACCC-GAGGATCT-CGATTTGTCAAGACAGGTTCAACTGGGTTATGAGATTGAC???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1145] Tuber_sp1_K201_Japan ????????????????????????????GGGCCCTTTGGC--GGACTTTCCGGACCCTT-GG--AAAG-CTCAC-AAGGATG-TTTAC--AATATCTGGAG-AAATGTGTTGAAACC-AGC-AAAGATTTCAATCTGACTTTGGCTGTCAAGTCTAA-CACTATCACTAATGGCCTAAAGTATTCTTTGGCAACGGGTAACTGGGGCGAACAAAAGAAGGCAGCCTCCTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCACCTGCGGCGCACCAATACTCCTATCGGTAGAGACGGGAAAATCGCAAAGCCACGC-CAGTTGCACAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCTGAAGGGCAAGCCTGTGGTCTTGTCAAAAATCTGTCTCTGATGTC-ATATATCACGATTGGCACCCCTGGA-TACCCATTGGTTGACTTTCTGTCGTCCAATGATATGGAATTGCTTGAAGAGTATGAGCCTCAGC-GGTCTCCCAATGCTACCAAGGTTTTCGTTAATGGGGTCTGGGTTGG-AACCCATCGTGATCCTCTCATGCTAGCCAAGGTTGTCCAAGATGTGCGAAGGCAAGGTGTTGTTAGCCACGAAGTTAGTGTTATTCGTGATATCCGAGATAGAGAGTTCAAGATTTTT-ACAGATGCGGGGCGGGTTTGCCGTCCACTTTTCG-TTATCGACAACGACCCTCGCAGCGAGCGACGAGGGCAACTTGTCCTACAAAAGGAGCATATAGAGAAGCTCGAG-GACGATCATC-AACTAGATATAGAGGACAGATTTGGCTGGGAAGGTCTACTCTTTGCAGGAGCTGTTGAGTATCTTGA-TGCGGAGGAGGAAGA-AGGTGTTATGATAGTCATGACACACTGAGGATCT-CGATTTGTCAAGACAG???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1139] Tuber_sp2_K215_Japan ???????????????????????GGTGGGCCCCTTTGGAC--GACCTTTCCGGACCCTT-GGAGAAAG-CTCACGAAGGATG-TCTAC-AAATATCTGGAG-AAATGTGTTGAAACC-AGC-AAAGATTTCAATCTGACTTTGGCTGTCAAGTCTAA-CACTATCACTAATGGCCTAAAGTATTCTTTAGCAACGGGTAACTGGGGCGAGCAAAAGAAGGCAGCTTCTTCCAAGGCCGGTGTCTCTCAAGTGTTGAACCGGTACACCTTTGCCTCTACCCTCTCTCACCTGCGGCGCACCAATACTCCTATCGGTAGAGACGGGAAAATCGCAAAGCCACGC-CAGTTGCACAATACCCATTGGGGATTGGTTTGTCCGGCCGAAACACCCGAAGGGCAGGCCTGTGGTCTTGTCAAAAATCTGTCTCTAATGTC-CTATATCACGATTGGCACTCCCGGA-TACCCATTGGTTGACTTTCTGTCGTCCAATGATATGGAGTTGCTTGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCTACTAAGGTTTTCGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTTATGCTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTCAGTGTTATTCGTGATATCCGAGATAGAGAGTTCAAGATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCACTTTTCG-TTATCGACAACGACCCCCGCAGCGAGCGACGAGGGCAACTCGTCCTGCAAAAGGAGCATATAGAAAAGCTCGAG-GACGATCATC-AACTAGATATAGAGGACAGATTTGGCTGGGAAGGTCTACTCTTTGCAGGAGCTGTTGAGTATCTTGA-TGCGGAGGAGGAAGA-AGGTGTTATGATAGTCATGACACCT-GAGGATCT-CGATTTATCAGAGCAGGTTCAA?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1142] Tuber_sp8_K228_Japan ?????????????????????????????????????????GGGCTTTTCCGAACTCTTTGGAGGAAA-CTCACGAAGGATG-TCTAC-AAATATCTGGAG-AAATGCGTTGAAACC-AGT-AAAGATTTCAATCTGACTTTGGCTGTCAAGTCTAA-CACTATCACCAATGGCCTAAAATACTCTTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAAGTATTGAACCGGTATACCTTTGCCTCTACCCTCTCCCATCTACGGCGCACCAATACTCCTATCGGTAGAGACGGGAAAATCGCAAAGCCCCGC-CAGTTGCACAATACCCATTGGGGATTAGTTTGCCCGGCCGAAACACCTGAAGGGCAAGCTTGTGGTCTTGTCAAAAACTTGTCTCTGATGTC-TTATATCACGATTGGCACTCCCGGA-TACCCATTGGTTGACTTTTTGTCGTCCAATGATATGGAGCTGCTTGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCTACCAAGGTTTTCGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTCAGCGTCATTCGTGATATCCGAGACAGAGAATTCAAGATCTTT-ACAGATGCCGGGCGGGTTTGCCGTCCGCTTTTCG-TTATCGACAACGACCCGCGCAGCGAGCGACGAGGACAACTTGTCCTGCAAAAGGAGCATATTGAAAAGCTCGAA-GACGATCATC-AACTAGACATAGAGGATAGATTTGGCTGGGAAGGTCTGCTCTTTGCAGGAGCTGTTGAGTATCTTGA-TGCGGAGGAAGAAGA-AGGCGTTATGATTGTCATGACACCT-GAGGATCT-TGATTTGTTCAGACAG???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1145] Tuber_sp9_K213_Japan ?????????????????GGATTGGCAGGCCCTCTTCTGGCAGGGCTTTTCCGGACCCTTTGGAGGAAA-CTCACGAAGGATG-TCTAT-AAATATCTGGAG-AAATGCGTTGAAACC-AGT-AAAGATTTCAATCTGACTTTGGCTGTCAAGTCTAA-CACTATCACCAATGGCCTAAAATACTCTTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAAGTATTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGCACCAATACTCCTATCGGTAGAGACGGGAAAATTGCAAAGCCCCGTTCAGTTGCACAATACCCATTGGGGATTAGTTTGCCCGGCCGAAACACCTGAAGGGCAGGCCTGCGGTCT-GTTATAAACCTGTCTCTAATGTC-TTATATCACGATTGGCACTCCCCGGATACCCATTGGTTGACTTTTTGTCGTCCAATGATATGGAGCTGCTTGAAGAATATGAGCCTCAGA-GGTCTCCCAATGCTACCAAGGTTTTCGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTTATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTCAGCGTTATTCGTGATATCCGAGACAGAGAATTCAAGATCTTT-ACAGATGCCGGGCGGGTTTGCCGTCCGCTTTTCG-TTATCGACAACGACCCTCGCAGCGAGCGACGAGGACAACTTGTCCTGCAAAAGGAGCATATTGAAAAGCTCGAA-GACGATCATC-AGCTGGATATAGAGGATAGATTTGGCTGGGAAGGTCTGCTCTTTGCAGGAGCTGTTGAGTATCTTGA-TGCAGAGGAAGAAGA-AGGCGTTATGATTGTCATGACACCT-GAGGATCT-CGATTTGTACAGG??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1146] Tuber_sp14_K186_Japan ????????????????????????GCTGGACCCTTTTGGCGGGCCTTTTCCGGACTCTTTGGAGAAAG-CTCACAAAGGATG-TCTAC-AAATATCTGGAG-AAATGTGTTGAAACC-AGC-AAAGATTTCAATTTGACTTTGGCTGTCAAGTCTAA-CACTATCACTAATGGCCTAAAATATTCTTTGGCAACGGGTAACTGGGGCGAGCAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGACGCACCAATACTCCTATCGGTAGAGATGGGAAAATCGCAAAGCCTCGT-CAATTGCACAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGGCAAGCCTGTGGTCTTGTCAAAAACCTATCTCTGATGTC-TTATATCACGATTGGTACCCCTGGA-TACCCATTAGTTGACTTTTTGTCGTCTAATGATATGGAATTGCTTGAAGAATATGAGCCCCAGC-GGTCTCCCAATGCTACTAAGGTTTTCGTCAACGGGGTTTGGGTTGG-AACCCATCGTGATCCACTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAGGGTGTTGTTAGCCACGAAGTCAGTGTCATTCGTGATATCCGAGACAGAGAGTTCAAAATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTTTTCG-TTATCGACAACGACCCTCGCAGCGAGCGGCGAGGACAACTCGTCCTGCAGAAGGAGCATATAGAGAAGCTCGAA-GACGATCATC-AACTAGATATAGAGGATAGATTTGGCTGGGAAGGTCTACTCTTTGCAGGGGCTGTTGAATATCTTGA-TGCAGAAGAAGAAGA-AGGTGTTATGATTGTCATGACGCCACGAGGATCT-CGATTTGTCAAGACAGG??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1146] Tuber_gennadii_BM667_Spain ?????????????????????????????????????????????TTTTCCGTACTCTTTGGAGAAAA-CTCACAAAGGATG-TCTAC-AAATATCTGGAG-AAATGCGTTGAAACT-AGC-AAAGATTTTAATTTGACTCTGGCTGTCAAGTCCAA-CACTATCACCAATGGCCTGAAATATTCTTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAAGTGCTGAACCGATACACCTTTGCCTCTACCCTCTCTCATCTACGGCGTACCAATACTCCTATCGGTAGAGACGGGAAAATCGCAAAGCCCCGC-CAGTTGCACAATACGCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAGGGGCAAGCCTGTGGTCTTGTTAAAAACCTGTCTCTAATGTC-TTATATTACGATCGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAATTGCTTGAGGAATATGAGCCTCAGC-GGTCTCCCAATGCTACCAAGGTTTTCGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCAAAGGTTGTTCAAGATGTGCGAAGGCAGGGTGTTGTCAGCCACGAAGTGAGCGTCATTCGTGATATCCGAGACAGAGAGTTCAAGATCTTT-ACGGATGCGGGGCGGGTTTGCCGTCCGCTTTTTG-TCATCGACAACGACCCTCGCAGCGAGCGACGAGGACAACTCGTCTTGCAGAAGGAGCATATAGAGAAGCTCGAA-GACGATCATC-AACTAGATATAGAGGACAGATTTGGCTGGGAAGGTCTACTATTTGCAGGGGCTGTTGAGTATCTTGA-TGCAGAGGAAGAAGA-AGGTGTTATGATTGTCATGACACCT-GAGGATCT-CGACTTGTCAAGACAAGTTCAGCTGGGTTATGAGATTGAACAGGAAACCGACCAGGCCAAGAGGGTAAAGGCACC-TATCAATTCTACG-A-CTCATACCTGGACACATTGTGAAATCCATCCAAGT-ATGATTCTTGGAATCTGTGCCAGTATTATCCCGTTCCCTGATCATAATCAGGTATGTTCTC??????????????????????????????????????????? [1141] Tuber_canaliculatum_OSC59072_West_Virginia ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GGCAACGGGTAACTGGGGTGAACAAAAGAAGGCAGCCTCTTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCACCTGCGGCGCACCAATACTCCTATCGGTAGAGACGGGAAAATCGCAAAGCCGCGC-CAGTTGCACAATACTCATTGGGGATTGGTTTGCCCGGCCGAAACCCCCGAAGGGCAAGCCTGTGGTCTTGTCAAAAACCTGTCTCTGATGTC-CTATATCACGATTGGCACTCCCGGA-TACCCATTGGTTGACTTTCTGTCGTCCAATGATATGGAATTGCTTGAAGAATATGAGCCTCAGC-GATCTCCCAATGCTACTAAGGTTTTCGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAGGGTGTTGTCAGCCACGAAGTCAGTGTTATTCGTGATATCCGAGACAGAGAGTTCAAGATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCACTTTTCG-TTATTGACAACGACCCTCGCAGCGAGCGACGAGGGCAACTCGTCCTGCAAAAGGAGCACATAGAAAAGCTCGAG-GACGATCATC-AACTAGATATAGAGGACAGATTTGGCTGGGAAGGTCTACTCTTTGCAGGAGCTGTTGAGTATCTTGA-TGCGGAGGAGGAAGA-AGG???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1154] Tuber_cf_borchii_China ??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????ATACCTTTGCCTCTACCCTCTCTCATCTACGACGCACCAATACTCCTATCGGTAGAGATGGGAAAATCGCAAAGCCTCGT-CAATTGCACAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGACAAGCCTGCGGTCTTGTCAAAAACCTATCTCTGATGTC-TTATATCACGATCGGTACCCCTGGA-TACCCATTAGTTGACTTTTTGTCGTCTAATGATATGGAATTGCTTGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCTACCAAGGTTTTCGTTAACGGGGTCTGGGTTGG-AACCCATCGTGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAGGGTGTTGTCAGCCACGAAGTCAGTGTCATTCGTGATATCCGAGACAGAGAGTTCAAAATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTTTTCGTTTATCGACAACGACCCTCGCAGCGAGCGACGAGGACAACTCGTCCTGCAGAAGGAACATATAGAGAAGCTCGAA-GACGATCATC-AACTAGATATAGAGGATAGATTTGGCTGGGAAGGTCTACTCTTTGCAGGGGCCG????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1157] Tuber_indicum_A_GB236_China ??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????CAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTGTCTCAGGTGCTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGCACCAATACTCCTATTGGAAGGGATGGGAAAATCGCAAAGCCCCGC-CAGTTGCACAATACCCATTGGGGACTGGTTTGCCCAGCCGAAACACCCGAAGGGCAAGCCTGCGGCCTTGTAAAAAACCTGTCTCTGATGTCTTTATATTACGATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAACTGCTTGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCTACTAAGGTTTTTGTTAATGGGGTGTGGGTCGG-AACCCATCGCGATCCCCTCATGTTAGCGAAGGTCGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGCGTCATTCGTGATATCCGAGACAGAGAGTTCAAGATCTTT-ACAGATGCCGGGCGGGTTTGCCGTCCGCTTTTCG-TTATAGACAACGACCCTCGCAGTGAGCGACGAGGGCAACTTGTCCTGCAGAAGGAGCATATAGAAAAGCTCGAG-GACGATCACC-AACTAGATATAGAGGACAGATTTGGCTGGGAAGGTCTGCTCTTTGCAGGAGCTGTCGAGTATCTTGA-CGCAGAGGAAGAAGA-AGGTGTTATGATTGTTATGACACCT?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1155] Tuber_indicum_A_GB240_China ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????AAATATTCCTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTGTCTCAGGTGCTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGCACCAATACTCCTATTGGAAGGGATGGGAAAATCGCAAAGCCCCGC-CAGTTGCACAATACCCATTGGGGACTGGTTTGCCCAGCCGAAACACCCGAAGGGCAAGCCTGCGGCCTTGTAAAAAACCTGTCTCTGATGTC-TTATATTACGATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAACTGCTTGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCTACTAAGGTTTTTGTTAATGGGGTGTGGGTCGG-AACCCATCGCGATCCCCTCATGTTAGCGAAGGTCGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGCGTCATTCGTGATATCCGAGACAGAGAGTTCAAGATCTTT-ACAGATGCCGGGCGGGTTTGCCGTCCGCTTTTCG-TTATAGACAACGACCCTCGCAGTGAGCGACGAGGGCAACTTGTCCTGCAGAAGGAGCATATAGAAAAGCTCGAG-GACGATCACC-AACTAGATATAGAGGACAGATTTGGCTGGGAAGGTCTGCTCTTTGCAGGAGCTGTCGAGTATCTTGA-CGCAGAGGAAGAAGA-AGG???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1154] Tuber_sp_RH8270753_Iowa ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????A-CACTATCACCAATGGCCTAAAATATTCTTTGGCAACGGGTAATTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAGGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGTACCAATACTCCTATTGGTAGAGACGGGAAAATCGCAAAGCCCCGC-CAGTTGCACAACACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTGAAAAACCTGTCTCTGATGTC-TTATATTACGATTGGCACTCCCGGA-TACCCTTTGGTTGACTTTTTGTCGTCCAATGATATGGAACTGCTTGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCAACCAAAGTTTTTGTTAACGGGGTTTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTAAGCGTCATTCGCGATATCCGAGACAGAGAGTTCAAGATCTTT-ACAGATGCGGGACGGGTTTGCCGTCCGCTCTTCG-TTATCGATAACGACCCTCGCAGTGAGCGACGAGGACAGCTCGTCCTGCAAAAGGAGCATATAGAAAAGCTGGAA-GATGATCATC-AGCTAGATGTAGAGGACAGATTTGGCTGGGAAGGGTTACTCTTTGCAGGAGCCGTTGAGTATCTTGA-TGCAGAGGAAGAAGA-AGGT??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1153] Tuber_regimontanum_ITCV909_Mexico_holotype ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????A-CACTATCACCAATGGCTTAAAATATTCCTTGGCAACAGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTGTCTCAGGTGCTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGCACCAATACTCCTATTGGAAGGGATGGGAAAATCGCAAAGCCCCGC-CAGTTGCACAATACCCATTGGGGACTGGTTTGCCCAGCCGAAACACCCGAAGGGCAAGCCTGCGGCCTTGTAAAAAACCTGTCTCTGATGTC-TTATATTACGATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAGCTGCTTGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCTACTAAGGTTTTTGTTAACGGAGTCTGGGTCGG-AACCCATCGCGATCCCCTCATGTTAGCGAAGGTCGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGCGTCATTCGTGATATCCGAGACAGAGAGTTCAAGATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTTTTCG-TTATAGACAACGACCCTCGCAGTGAGCGACGAGGGCAACTCGTTCTGCAGAAGGAACATATAGAAAAGCTCGAG-GACGATCACC-AACTAGATGTAGAGGACAGATTTGGCTGGGAAGGTCTGCTCTTTGCAGGAGCTGTCGAGTATCTTGA-TGCAGAGGAAGAAGA-AGGTGTTATGATTGTTATG???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1153] Tuber_sp_ITCV908_Mexico ??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GCGGGTGTCTCCCAGGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGCACCAATACTCCTATCGGTAGAGACGGGAAAATCGCAAAGCCCCGC-CAGCTGCACAACACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGGCAGGCCTGCGGTCTTGTGAAAAACCTGTCTCTGATGTC-TTATATTACGATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAACTGCTTGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCTACCAAGGTTTTTGTTAACGGGGTCTGGGTTGG-AACTCATCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGACGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGCGTCATTCGCGATATCCGAGACAGAGAGTTCAAGATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTCTTCG-TCATCGACAACGACCCTCGCAGTGAGCGACGAGGACAACTCGTCCTCCAAAAGGAGCATATAGAGAAGCTCGAA-GACGATCATC-AACTAGAAATAGAGGATAGATTTGGCTGGGAAGGTTTACTCTTTGCAGGAGCTGTTGAATATCTTGA-TGCAGAGGAAGAAGA-AGGTGTTATGATTGTCATGACACCT-GAAGATCT-CGATTTGTCGAGACAGGTTCAACTGGGTTAT????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1152] Tuber_lyonii_GA21_Georgia ??????????????????????????????????????????????????????CTCTTTGGAGAAAA-CTCACGAAGGATG-TCTAC-AAATATTTGGAG-AAATGTGTTGAAACC-AGC-AAGGATTTCAATCTGACTTTAGCTGTTAAGTCTAA-CACTATCACCAATGGCCTAAAATATTCTTTGGCAACGGGTAATTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCCCAGGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGCACCAATACTCCTATCGGTAGAGACGGGAAAATCGCAAAGCCCCGC-CAGTTGCACAACACCCATTGGGGATTGGTTTGCCCGGCTGAAACACCCGAAGGGCAGGCCTGCGGTCTTGTGAAAAACCTGTCTCTGATGTC-TTATATTACGATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAACGATATGGAACTGCTTGAAGAATATGAACCTCAGC-GGTCTCCCAATGCTACCAAGGTTTTTGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGCGTCATTCGCGATATCCGAGACAGAGAGTTCAAGATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTCTTCG-TCATCGACAACGACCCTCGCAGTGAGCGACGAGGACAACTCGTCCTCCAAAAGGAGCATATAGAGAAGCTCGAA-GACGATCATC-AACTAGAAATAGAGGATAGATTTGGCTGGGAAGGTTTACTCTTTGCAGGAGCTGTTGAATATCTTGA-CGCAGAGGAAGAAGA-AGGTGTTATGATTGTCATGAC?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1147] Tuber_beyeleri_JT32597_Oregon ??????????????????????????????????????????????????????????????????????????????????????????????TCTGGAG-AAATGTGTTGAAACC-AGC-AAAGATTTCAATCTGACTTTGGCTGTTAAGTCTAA-CACTATCACTAATGGCCTAAAATATTCTTTGGCGACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCCTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGCACCAATACTCCTATTGGTAGAGACGGGAAAATCGCAAAGCCCCGC-CAATTGCACAATACCCATTGGGGATTGGTTTGTCCGGCTGAAACACCCGAAGGGCAAGCCTGTGGTCTTGTCAAAAACCTGTCTCTGATGTC-TTATATCACGATTGGCACTCCCGGA-TATCCATTGGTTGACTTTTTGTCGTCTAATGACATGGAATTGCTTGAAGAATATGAGCCCCAGC-GGTCTCCTAATGCTACCAAGGTTTTCGTTAACGGGGTCTGGGTTGG-AACCCACCGCGATCCTCTCATGTTGGCGAAGGTTGTTCAAGATGTGCGAAGGCAGGGTGTTGTCAGCCACGAAGTTAGTGTCATTCGTGATATCCGAGACAGAGAATTCAAAATCTTT-ACAGACGCGGGACGGGTTTGCCGTCCGCTTTTCG-TTATCGACAACGACCCTCGCAGCGAGCGACGAGGACAACTCGTCCTGCAAAAGGAGCATATAGAGAAGCTCGAA-GATGATCATCAAACTAGATATCGAGGACAGATTTGGCTGGGAAGGCCTACTCTTTGCAGGAGCTGTCGAATATCTTGA-TGCGGAGGAAGAAGA-AGGTGTTATGATTGTCATGACGCCC-GAGGATCT-CGATTTGTCAAGACAGGTTCAACTGGGTTATGAGATTGAACAGGAAACTGACCAGGCTAAAAGAGTCAAGGCGCC-GATAAATTCTACA-A-CTCATACTTGGACACATTGTGAAATCCATCCAAGT-ATGATTCTTGGAATCTGTG????????????????????????????????????????????????????????????????????????????????????? [1145] Tuber_gibbosum_JT26632_Washington ??????????????????????????????????????????????????????????????????????????????????????????AATATCTGGAG-AAATGTGTTGAAACC-AGC-AAAGATTTCAATCTGACTTTGGCTGTCAAATCTAA-CACCATCACTAATGGCCTAAAATATTCTTTGGCAACGGGTAACTGGGGAGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAGGTGTTGAACCGGTATACATTTGCCTCTACCCTCTCTCATCTGCGGCGCACCAATACTCCCATTGGTAGAGACGGGAAAATTGCAAAGCCCCGC-CAGTTACATAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGGCAAGCCTGTGGTCTTGTCAAAAACCTGTCTCTAATGTC-GTATATCACGATTGGCACTCCCGGA-TACCCATTGGTTGACTTTTTGTCGTCCAATGACATGGAATTGCTTGAAGAATACGAGCCTCAAC-GATCTCCCAATGCTACTAAGGTTTTCGTCAACGGGGTCTGGGTCGG-AACCCATCGTGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGTGTCATTCGTGATATACGAGATAGAGAGTTCAAGATCTTT-ACAGATGCGGGGCGGGTTTGCCGACCGCTTTTTG-TTATCGACAACGACCCTCGTAGCGAGCGACGAGGACAGCTCGTCCTACAAAAGGAGCATATAGAGAAGCTCGAA-GATGATCATC-AACTGGATATAGAGGATAGATTTGGC????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1152] Tuber_gibbosum_JT30580_Oregon ??????????????????????????????????????????????????????????????????????????????????????????AATATCTGGAG-AAATGTGTTGAAACC-AGC-AAAGATTTCAATCTGACTTTGGCTGTCAAATCTAA-CACCATCACTAATGGCCTAAAATATTCTTTGGCAACGGGTAACTGGGGAGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAGGTGTTGAACCGGTATACATTTGCCTCTACCCTCTCTCATCTGCGGCGCACCAATACTCCCATTGGTAGAGACGGGAAAATTGCAAAGCCCCGC-CAGTTACATAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGGCAAGCCTGTGGTCTTGTCAAAAACCTGTCTCTAATGTC-GTATATCACGATTGGCACTCCCGGA-TACCCATTGGTTGACTTTTTGTCGTCCAATGACATGGAATTGCTTGAAGAATACGAGCCTCAAC-GATCTCCCAATGCTACTAAGGTTTTCGTCAACGGGGTCTGGGTCGG-AACCCATCGTGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGTGTCATTCGTGATATACGAGATAGAGAGTTCAAGATCTTT-ACAGATGCGGGGCGGGTTTGCCGACCGCTTTTTG-TTATCGACAACGACCCTCGTAGCGAGCGACGAGGACAGCTCGTCCTACAAAAGGAGCATATAGAGAAGCTCGAA-GATGATCATC-AACTGGATATAGAGGATAGATTTGGCTGG?A?GGTCTACTCTTTGCAGGAGCT?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1152] Tuber_oregonense_GB284_Oregon_holotype ??????????????????????????????????????????????????????????????????????????????????????????AATATCTGGAG-AAATGTGTTGAAACC-AGC-AAGGACTTCAATCTGACCTTGGCTGTCAAATCTAA-CACCATCACTAATGGCCTAAAATATTCTTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGGTATACCTTTGCCTCTACTCTCTCTCATCTGCGGCGCACCAATACTCCTATCGGCAGAGACGGGAAAATTGCAAAGCCCCGC-CAATTACACAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCTGAAGGGCAAGCCTGTGGTCTTGTCAAAAACCTGTCTCTAATGTC-GTATATCACGATTGGCACCCCCGGG-TACCCATTGGTTGACTTTTTGTCGTCCAATGACATGGAATTGCTTGAAGAATATGAGCCTCAAC-GATCTCCCAATGCTACTAAGGTTTTCGTCAACGGGGTCTGGGTCGG-AACCCATCGTGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAG????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1156] Tuber_oregonense_JT30493_Oregon_paratype ?????????????????????????????????????????????????????????????????????CTCACGAAGGATG-TCTAC-AAATATCTGGAG-AAATGTGTTGAAACC-AGC-AAGGACTTCAATCTGACCTTGGCTGTCAAATCTAA-CACCATCACTAATGGCCTAAAATATTCTTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGGTATACCTTTGCCTCTACTCTCTCTCATCTGCGGCGCACCAATACTCCTATCGGCAGAGACGGGAAAATTGCAAAGCCCCGC-CAATTACACAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCTGAAGGGCAAGCCTGTGGTCTTGTCAAAAACCTGTCTCTAATGTC-GTATATCACGATTGGCACCCCCGGG-TACCCATTGGTTGACTTTTTGTCGTCCAATGACATGGAATTGCTTGAAGAATATGAGCCTCAAC-GATCTCCCAATGCTACTAAGGTTTTCGTCAACGGGGTCTGGGTTGG-AACCCATCGTGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGGAGGCAGGGTGTTGTTAGCCACGAAGTTAGTGTCATTCGTGATATACGAGATAGAGAGTTCAAGATCTTT-ACAGATGCGGGGCGGGTTTGCCGACCGCTTTTTG-TTATCGACAACGACCCTCGCAGCGAGCGACGAGGACAGCTCGTTCTACAGAAGGAGCATATAGAGAAGCTCGAA-GACGATCATC-AACTGGATATAGAGGAGAGATTTGGTTGGGAAGGTCTACTCTTTGCAGGAGCTGTTGAGTATCTTGA-TGCAGAGGAGGAAGA-AGGTGTTATGATTGTCATGACACCT-GAGGATCT-TGATTTGTCAAGACAAGTTCAACTAGGTTATGAGATTGAACAGGAAACCGACCAGGCCAAAAGAGTCAAGGCACC-GATCAATTCTACG-A-CTCATACCTGGACACATTGTGAAATCCATCCAAGT-ATGATTCTTGGAATTTGTGCCAGTATTATTCCGTTCCCAGATCATAATCAGGTATGTTCCT??????????????????????????????????????????? [1142] Tuber_castellanoi_JT28069_California_holotype ???????????????????????????????????????????????TTTTCCGGANTCTTTGGAGAA-AACTCACGAAGGANGNCTACNAATATCTGGAG-AAATGTGTTGAAACC-AGC-AAAGATTTCAATCTGACTTTGGCTGTCAAATCTAA-CACCATCACTAATGGCCTAAAATATTCTTTAGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGGTATACATTTGCCTCTACCCTCTCTCATCTGCGGCGCACCAATACTCCCATTGGCAGAGACGGGAAAATTGCAAAGCCCCGC-CAGTTACACAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTCAAAAACCTGTCTCTAATGTC-GTATATCACGATTGGCACTCCCGGA-TACCCATTGGTTGACTTTTTGTCGTCCAATGACATGGAATTGCTTGAAGAATATGAGCCTCAAC-GATCTCCCAATGCTACTAAGGTTTTCGTCAACGGGGTCTGGGTTGG-AACCCATCGTGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGTGTCATTCGTGATATACGAGATAGAGAGTTCAAGATCTTT-ACAGATGCGGGGCGAGTTTGCCGACCGCTTTTTG-TTATCGACAACGACCCTCGTAGCGAGCGACGAGGACAGCTCGTCCTACAAAAGGAGCATATAGAGAAGCTCGAA-GATGATCATC-AACTGGATATAGAGGATAGATTTGGCTGGGAAGGTCTACTCTTTGCAGGAGCTGTTGAGTATCTTGA-TGCAGAGGAGGANGA-AGGTGTTATGATTGTCATGACGCCT-GAGGATCT-TGATTTGTCAAGGCAAGTTCAACTAGGTTATGAGATTGAACAGGAAACCGACCAGGCCAAAAGAGTCAAGGCACC-GATCAATTCTACG-A-CTCATACCTGGACACATTGCGAAATCCATCCAAGTATGATTCTTGGAATCTGTGCCAGTATTATTCCGTTCCCAGATCATAATCAGGTATGTTCCT???????????????????????????????????????????? [1144] Tuber_bellisporum_JT11679_Oregon_holotype ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GACTTTGGCTGTTAAATCTAA-CACCATCACTAATGGCCTAAAATATTCTTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGGTATACCTTTGCCTCTACTCTCTCTCATCTGCGGCGCACCAATACTCCTATCGGCAGAGACGGGAAAATTGCAAAGCCCCGC-CAATTACACAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCTGAAGGGCAAGCCTGTGGTCTTGTCAAAAACCTGTCTCTAATGTC-GTATATCACGATTGGCACCCCCGGG-TACCCATTGGTTGACTTTTTGTCGTCCAATGACATGGAATTGCTTGAAGAATATGAGCCTCAAC-GATCTCCCAATGCTACTAAGGTTTTCGTCAACGGGGTCTGGGTTGG-AACCCATCGTGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGGAGGCAGGGTGTTGTTAGCCACGAAGTTAGTGTCATTCGTGATATACGAGATAGAGAGTTCAAGATCTTT-ACAGATGCGGGGCGGGTTTGCCGACCGCTTTTTG-TTATCGACAACGACCCTCGCAGTGAGCGACGAGGACAGCTCGTTCTACAGAAGGAGCATATAGAGAAGCTCGAA-GACGATCATC-AACTGGATATAGAGGAGAGATTTGGTTGGGAAGGTCTACTCTTTGCAGA?-CTGT???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1154] Tuber_brumale_GB21_Italy ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????AGATGGGAAAATTGC?AAGCCCCGC-CAGTTGCACAATACCCATTGGGGACTGGTTTGCCCGGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTAAAAAACCTGTCTCTGATGTC-TTATATTACGATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAATTGCTTGAAGAATATGAACCTCAGC-GGTCTCCAAATGCTACCAAGGTTTTTGTTAACGGGGTCTGGGTGGG-AACCCATCGCGATCCCCTCATGTTAGCGAAGGTCGTTCAAGATGTGCGAAGGCAAGGCGTTGTCAGCCACGAAGTTAGCGTCATTCGTGATATACGGGATAGAGAGTTCAAAATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTTTTCG-TTATAGACAACGACCCTCGCAGTGAGCGACGAGGGCAACTCGTTCTGCAGAAGGAGCATATAGAAAAGCTCGAG-GACGATCACC-AACTAGATGTAGAGGACAGGTTTGGCTGGGAAGGCCTGCTCTTTGCA?GAGCTGTTG?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1156] Tuber_brumale_GB22_Italy ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GGGAAAATTGC?AAGCCCCGC-CAGTTGCACAATACCCATTGGGGACTGGTTTGCCCGGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTAAAAAACCTGTCTCTGATGTC-TTATATTACGATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAATTGCTTGAAGAATATGAACCTCAGC-GGTCTCCAAATGCTACCAAGGTTTTTGTTAACGGGGTCTGGGTGGG-AACCCATCGCGATCCCCTCATGTTAGCGAAGGTCGTTCAAGATGTGCGAAGGCAAGGCGTTGTCAGCCACGAAGTTAGCGTCATTCGTGATATACGGGATAGAGAGTTCAAAATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTTTTCG-TTATAGACAACGACCCTCGCAGTGAGCGACGAGGGCAACTCGTTCTGCAGAAGGAGCATATAGAAAAGCTCGAG-GACGATCACC-AACTAGATGTAGAGGACAGGTTTGGCTGGGAAGGCCTGCTCTTTGCAGGAGCTGTTGA????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1156] Tuber_canaliculatum_JT28215_New_Jersey ?????????????????????????????????????????????????????????????????????????CGAAGGATG-TCTAC-AAATATCTGGAG-AAATGTGTTGAAACC-AGC-AAAGATTTCAATCTGACTTTGGCTGTCAAGTCTAA-CACTATCACTAATGGCCTAAAGTATTCTTTGGCAACGGGTAACTGGGGTGAACAAAAGAAGGCAGCCTCTTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCACCTGCGGCGCACCAATACTCCTATCGGTAGAGACGGGAAAATCGCAAAGCCGCGC-CAGTTGCACAATACTCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGGCAAGCCTGTGGTCTTGTCAAAAACCTGTCTCTGATGTC-CTATATCACGATTGGCACTCCCGGA-TACCCATTGGTTGACTTTCTGTCGTCCAATGATATGGAATTGCTTGAAGAATATGAGCCTCAGC-GATCTCCCAATGCTACTAAGGTTTTCGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAGGGTGTTGTCAGCCACGAAGTCAGTGTTATTCGTGATATCCGAGACAGAGAGTTCAAGATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCACTTTTCG-TTATTGACAACGACCCTCGCAGCGAGCGACGAGGACAACTCGTCCTGCAAAAGGAGCACATAGAAAAGCTCGAG-GACGATCATC-AACTAGATATAGAGGACAGATTTGGCTGGGAAGGTCTACTCTTTGCAGGAGCTGTTGAGTATCTTGA-TGCGGA?GAGGAAGA-A?GTGTTATGATAGTCATGACACCT-GA?GATCT-CGATTTGTCAAGACAGGTTCAACTGGGTTAT????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1146] Tuber_dryophilum_GB37_Italy ??????????????????????????????????????????????????????????????????????????????????????????????????????????G?GTTGAAACC-AGC-AAAGATTTCAATTTGACTTTGGCTGTCAAGTCTAA-CACTATCACTAATGGCCTAAAATATTCTTTGGCAACCGGTAACTGGGGCGAGCAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGACGCACCAATACTCCTATCGGTAGAGATGGGAAAATCGCGAAGCCTCGT-CAATTGCACAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGGCAAGCCTGTGGTCTTGTCAAAAACCTATCTCTGATGTC-TTATATCACGATTGGTACCCCCGGA-TACCCATTAGTTGACTTTTTGTCGTCTAATGATATGGAATTGCTTGAAGAATATGAGCCTCAAC-GGTCTCCCAATGCTACTAAGGTTTTCGTTAACGGGGTCTGGGTTGG-AACCCATCGTGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAGGGTGTTGTCAGCCACGAAGTCAGTGTCATTCGTGATATCCGAGACAGAGAGTTCAAAATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTTTTCG-TTATCGACAACGACCCTCGCAGCGAGCGACGAGGACAACTCGTCTTGCAGAAGGAGCATATAGAGAAGCTCGAA-GATGATCATC-AACTAGATATAGAGGATAGATTTGGCTGGGAAGGTCTACTCTTTGCAGGGGCTGTT??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1153] Tuber_magnatum_GB12_Italy ???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????gcagcctCTTCCAAGGCGGGTGTGTCTCAGGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGCACCAATACTCCTATCGGTAGAGACGGGAAAATCGCAAAGCCCCGC-CAGCTGCACAATACCCATTGGGGGTTGGTTTGCCCGGCCGAAACACCCGAAGGCCAAGCCTGCGGTCTTGTAAAAAACCTGTCCCTGATGTC-CTATATCACGATTGGCACTCCCGGA-TATCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAATTGCTCGAGGAGTATGAACCTCAAC-GGTCTCCCAATGCTACCAAGGTTTTCGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGACAAGGTGTTGTCAGCCACGAAGTCAGCGTCATTCGTGATATCCGAGATAGAGAGTTCAAGATCTTT-ACAGATGCGGGGCGAGTTTGCCGTCCGCTTTTCG-TTATTGACAATGACCCTCGTAGCGAGCGGCGAGGACAACTCGTCTTGCAAAAAGAGCATATAGAAAAACTCGAA-GACGATCATC-AACTAGATATAGAGGACAGATTTGGCTGGGAAGGTCTGCTCTTTGCGGGAGCCGTTGA????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1156] Tuber_magnatum_GB13_Italy ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GATTTCAATCTGACTTTGGCTGTCAAGTCTAA-CACTATCACCAATGGCCTAAAATATTCTTTGGCAACGGGTAACTGGGGCGAACAAAAAAAAGCAGCCTCTTCCAAGGCGGGTGTGTCTCAGGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGCACCAATACTCCTATCGGTAGAGACGGGAAAATCGCAAAGCCCCGC-CAGCTGCACAATACCCATTGGGGGTTGGTTTGCCCGGCCGAAACACCCGAAGGCCAAGCCTGCGGTCTTGTAAAAAACCTGTCCCTGATGTC-CTATATCACGATTGGCACTCCCGGA-TATCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAATTGCTCGAGGAGTATGAACCTCAAC-GGTCTCCCAATGCTACCAAGGTTTTCGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGACAAGGTGTTGTCAGCCACGAAGTCAGCGTCATTCGTGATATCCGAGATAGAGAGTTCAAGATCTTT-ACAGATGCGGGGCGAGTTTGCCGTCCGCTTTTCG-TTATTGACAATGACCCTCGCAGCGAGCGGCGAGGACAACTCGTCTTGCAAAAAGAGCATATAGAAAAACTCGAA-GA???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1156] Tuber_malacodermum_JT32319_Spain ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????TATCACCAATGGCCTAAAATATTCTTTGGCAACGGGTAATTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAGGTGCTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGTACCAATACGCCTATCGGTAGAGATGGGAAAATCGCAAAACCCCGC-CAGTTGCACAACACCCATTGGGGATTGGTTTGCCCTGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTGAAAAACCTGTCTCTGATGTC-TTATATTACGATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAACTGCTTGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCTACCAAAGTTTTTGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAGGGTGTTGTCAGCCACGAAGTTAGCGTCATTCGTGATATCCGAGACAGGGAATTCAAGATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTCTTCG-TTATCGACAACGACCCTCGCAGTGAGCGACGGGGACAACTCGTTCTGCAAAAGGAGCATATAGAAAAGCTCGAA-GACGATCATC-AGCTAGAAATAGAGGACAGATTTGGCTGGGAAGGTTTACTCTTTGCAGGAGCTGTTGAGTATCTTGA-TGCGGAGGAAGAAGA-AGGTGTTATGATTGTCA?GACACC??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1154] Tuber_melanosporum_GB200_Italy ?????????????????????????????????????????????????????????????????????????????????????????????????GGAG-AAATGCGTTGAAACT-AGC-AAAGATTTCAATCTGACTTTGGCTGTCAAGTCTAA-CACTATCACCAATGGCTTAAAATATTCCTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTGTCTCAGGTGCTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGCACCAATACTCCTATTGGAAGGGATGGGAAAATCGCAAAGCCCCGC-CAGTTGCACAATACCCATTGGGGACTGGTTTGCCCAGCCGAAACACCTGAAGGGCAAGCCTGCGGCCTTGTAAAAAACCTGTCTCTGATGTC-TTATATTACGATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAGCTGCTTGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCTACTAAGGTTTTTGTTAACGGGGTCTGGGTCGG-AACCCATCGCGATCCCCTCATGTTAGCGAAGGTCGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGCGTCATTCGTGATATCCGAGACAGAGAGTTCAAGATCTTT-ACAGATGCCGGGCGGGTTTGCCGTCCGCTTTTCG-TTATAGACAACGACCCTCGCAGTGAGCGACGAGGGCAACTTGTCCTGCAGAAGGAGCATATAGAAAAGCTTGAG-GACGATCACC-AACTAGATATAGAGGACAGATTTGGCTGGGAAGGTCTGCTCTTTGCAGGA????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1152] Tuber_mesentericum_CW105_Sweden ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????CCTAAAATATTCTTTAGCAACGGGTAATTGGGGCGAACAAAAGAAAGCAGCCTCCTCCAAGGCAGGTGTGTCTCAAGTATTGAACCGGTACACCTTTGCCTCTACCCTCTCTCATCTACGGCGCACCAATACTCCTATCGGTAGAGACGGGAAAATTGCGAAGCCTCGC-CAGTTGCACAATACCCATTGGGGGTTGGTATGCCCGGCCGAAACACCCGAAGGGCAGGCCTGCGGTCTTGTAAAAAACCTGTCTCTGATGTC-TTATATCACGATTGGCACTCCCGGG-TATCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAATTACTCGAGGAATATGAACCTCAGC-GGTCTCCAAATGCTACTAAGGTTTTCGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTGGCGAAGGTTGTTCAAGATGTGCGAAGACAGGGTGTTGTCAGCCACGAAGT-AGCGTCATTCGTGATATTCGAGATAGAGAGTTCAAAATCTTT-ACAGATGCGGGGCGAGTTTGCCGTCCGCTTTTCG-TTATCGACAATGACCCCCGTAGCGAGCGACGAGGACAACTCGTCCTGCAAAAGGAGCATATAGAAAAGCTCGAA-GACGATCATC-AACTAGATATAGAGGACAGATTTGGCTGGGAAGGCCTACTCTTTGCTGGGGCTGTTGAGTAT????A-TGCAGAGGAGGAGGA-AGGTGTTATGAT??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1153] Tuber_sp_JT13224_West_Virginia ??????????????????????????????????????????????????????????????????????????????????GTCTAC-AAATATCTGGAG-AAATGCGTTGAAACC-AGC-AAGGATTTCAATCTGACTTTAGCTGTTAAGTCTAA-CACTATCACCAATGGCCTAAGGTATTCTTTGGCAACGGGTAATTGGGGCGAACAAAAGAAAGCAGCCTCTTCTAAGGCGGGTGTTTCTCAGGTGTTGAACCGGTATACCTTTGCGTCTACCCTCTCTCATCTACGGCGCACCAATACGCCTATCGGTAGGGATGGGAAAATCGCAAAGCCCCGC-CAGTTGCACAACACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTGAAAAACCTGTCTCTGATGTC-TTATATTACGATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAGCTGCTTGAAGAATATGAGCCCCAGC-GGTCTCCCAATGCTACTAAGGTTTTTGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGCGTCATTCGCGATATCCGAGACAGAGAATTCAAGATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTCTTCG-TTATCGACAACGATCCTCGCAGTGAGCGACGGGGACAACTCGTTCTGCAAAAGGAGCATATAGAAAAGCTCGAA-GACGATCATC-AGCTAGAAATAGAGGACAGATTTGGCTGGGAAGG?TTACTCTTTGC??G-GCTGTTGAG???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1150] Tuber_spinoreticulatum_U188_Maryland_isotype ??????????????????????????????????????????????????????????????????????????????????????????AATATCTGGAG-AA?TGTGTTGAAACC-AGC-AAAGATTTCAATCTGACTTTAGCTGTCAAGTCTAA-CACTATCACCAATGGCCTAAAATATTCTTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAGGTGTTGAACCGGTATACATTTGCCTCCACCCTCTCTCATCTACGGCGCACCAATACTCCTATCGGCAGAGACGGGAAAATCGCAAAGCCCCGC-CAGTTGCACAATACCCACTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGACAAGCCTGCGGTCTTGTAAAAAACCTGTCTCTGATGTC-TTATATTACGATTGGTACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAATTGCTTGAGGAATATGAGCCTCAGC-GGTCTCCTAATGCTACCAAGGTTTTTGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTTGTCCAAGATGTGCGGAGGCAAGGTGTCGTCAGCCACGAAGTTAGCGTCATTCGTGATATCCGAGACAGAGAGTTCAAGATCTTT-ACAGATGCGGGACGGGTTTGCCGTCCGCTATTCG-TTATCGACAACGACCCTCGCAGCGAGCGGCGAGGACAACTCGTCCTGCAAAAGGAACATATAGAAAAGCTCGAA-GACGATCACC-AACTAGAAATAGAGGACAGATTTGGCTGGGAAGGTTTACTCTTTGCAGGAGCTGTTGA????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1152] Tuber_indicum_B_JT29410_Oregon ???????????????????????????????????????????????????????????????????????????????????????????????????????????????????CT-AGC-AAAGAtTTCAATCTGACTTTGGCTGTCAAGTCTAA-CACTATCACCAATGGCTTAAAATATTCCTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTGTCTCAGGTGCTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGCACCAATACTCCTATTGGAAGGGATGGGAAAATCGCAAAGCCCCGC-CAGTTGCACAATACCCATTGGGGACTGGTTTGCCCAGCCGAAACACCCGAAGGGCAAGCCTGCGGCCTTGTAAAAAACCTGTCTCTGATGTC-TTATATTACGATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAGCTGCTTGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCTACTAAGGTTTTTGTTAACGGGGTGTGGGTCGG-AACCCATCGCGATCCCCTCATGTTAGCGAAGGTCGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGCGTCATTCGTGATATCCGAGACAGAGAGTTCAAGATCTTT-ACAGATGCCGGGCGGGTTTGCCGTCCGCTTTTCG-TTATAGACAATGACCCTCGCAGTGAGCGACGAGGGCAACTTGTCCTGCA?AAGGAGCATATAGAAAAGCTCGAG-GACGATCACC-AACTAGATATAGAGGACAGATTTGGCTGGGAAGGTCTGCTCTTTGCA?GA????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1153] Tuber_californicum_JT28058_California ???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GGCCTAAAATATTCTTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGACGCACCAATACTCCTATCGGTAGAGATGGGAAAATCGCGAAGCCTCGT-CAATTGCACAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGGCAAGCCTGTGGTCTTGTCAAAAACCTATCTCTGATGTC-TTATATCACGATTGGCACCCCCGGA-TACCCACTAGTTGACTTCTTGTCGTCTAATGATATGGAATTGCTTGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCTACTAAGGTTTTCGTTAACGGGGTCTGGGTTGG-AACTCATCGTGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAGGGTGTTGTCAGCCACGAAGTCAGTGTCATTCGTGATATCCGAGATAGAGAGTTCAAAATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTTTTCG-TTATCGACAACGACCCTCGCAGCGAGCGACGAGGACAACTCGTCCTGCAGAAGGAGCATATAGAGAAGCTCGAA-GACGATCATC-AACTAGATATAGAGGATAGATTTGGCTGGGAAGGTCTACTCTTTGCAGGGGCTGTTGAATATCTTGA-TGCAGAGGAAGAAGA-AGGTGTTATGATCGTCATGACGCCC-GAGGATCT-SGATTTGTCAAGACAGGTTC??CTGGGTTATGAGATTG?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1152] Tuber_lyonii_OSC58244_Texas ?????????????????????????????????????????????????????????????????????CTCACGAAGGATG-TCTAC-AAATATTTGGAG-AAATGTGTTGAAACC-AGC-AAGGATTTCAATCTGACTTTAGCTGTTAAGTCTAA-CACTATCACCAATGGCCTAAAATATTCTTTGGCAACGGGTAATTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCCCAGGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGCACCAATACTCCTATCGGTAGAGACGGGAAAATCGCAAAGCCCCGC-CAGTTGCACAACACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGGCAGGCCTGCGGTCTTGTGAAAAACCTGTCTCTGATGTC-TTATATTACGATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAACTGCTTGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCTACCAAGGTTTTTGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGCGTCATTCGCGATATCCGAGACAGAGAGTTCAAGATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTCTTCG-TCATCGACAACGACCCTCGCAGTGAGCGACGAGGACAACTCGTCCTCCAAAAGGAGCATATAGAGAAGCTCGAA-GACGATCATC-AACTAGAAATAGAGGATAGATTTGGCTGGGAAGGTTTACTCTTTGCAGGAGCTGTTGAATATCTTGA-TGCAGAGGAAGAAGA-AGGTGTTATGATTGTCATGACACCT-GAAGATCT-CGATTTGTCGAGACAGGTTCAACTAGGTTATGAGATTGAACAGGAAACCGACCAAGCCAAGAGGGTAAAGGCCCC-GATCAACTCTACG-A-CTCACACCTGGACACATTGTGAAATCCATCCAAGT-ATGATTCTTGGAATCTGCGCTAGTATTATTCCGTTCCCTGATCATAATCAAGTATGTTCCT??????????????????????????????????????????? [1142] Tuber_asa_M1828_Italy ????AAAAAAGAGATTGGATTTGGCTGGGCCTCTTTTGGCAGGACTTTTCCGGACTCTTTGGAGGAAG-CTCACAAAGGATG-TCTAC-AAATATCTGGAG-AAATGTGTTGAAACC-AGC-AAAGATTTCAATTTGACTTTGGCTGTCAAGTCTAA-CACTATCACTAATGGCCTAAAATATTCTTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGGTATACCTTTGCCTCTACACTCTCTCATCTACGGCGCACCAATACTCCTATCGGTAGAGACGGGAAAATCGCAAAGCCTCGT-CAATTGCACAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAGGGGCAAGCCTGCGGTCTTGTCAAAAACCTGTCTCTGATGTC-TTATATCACGATTGGCACCCCCGGG-TACCCATTAGTTGACTTTTTGTCGTCTAACGATATGGAATTGCTTGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCTACTAAGGTTTTCGTTAACGGAGTCTGGGTTGG-AACCCATCGTGATCCTCTCATGTTAGCGAAGGTTGTCCAAGATGTGCGAAGGCAGGGTGTTGTCAGCCACGAAGTCAGTGTTATTCGCGATATCAGAGACAGAGAGTTCAAAATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCACTTTTCG-TTATCGACAACGACCCTCGCAGCGAGCGACGAGGACAGCTCGTCCTGCAGAAGGAGCATATAGAGAAGCTCGAA-GACGATCATC-AACTAGATATAGAGGATAGATTTGGCTGGGAAGGTCTACTCTTTGCAGGAGCTGTTGAATATCTTGA-TGCAGAGGAAGAAGA-AGGTGTTATGATTGTCATGACGCCC-GAGGATCT-CGA????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1145] Tuber_gennadii_M1904_Italy ?????AAAAAAGAGACTGGATTGGCGGG?CCTCTTTTGGCAGGACTTTTCCGTACTCTTTGGAGAAAA-CTCACAAAAGGATGTCTACAAAATATCTGGAGAAAATGCGTTGAAAACTAGCAAAAGATTTTAATCTGACTCTGGCTGTCAAGTCCAAACACTATCACCAATGGCCTAAAATATTCTTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCCTCCAAGGCGGGTGTCTCTCAAGTGCTGAACCGATACACTTTTGCCTCTACCCTCTCTCATCTACGGCGTACCAATACTCCTATCGGTAGAGACGGGAAAATCGCAAAACCCCGC-CAGTTGCACAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAGGGGCAAGCCTGTGGTCTTGTTAAAAACCTGTCTCTAATGTC-TTATATTACAATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAATTGCTTGAGGAATATGAGCCTCAGC-GGTCTCCCAATGCTACCAAGGTTTTCGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTGAGCGTCATTCGTGATATCCGAGACAGAGAGTTCAAGATCTTT-ACGGATGCGGGGCGGGTTTGCCGTCCGCTTTTTG-TTATCGACAACGACCCTCGCAGCGAGCGACGGGGGCAACTCGTCTTGCAGAAGGAGCATATAGAGAAGCTCGAA-GACGATCATC-AACTAGATATAGAGGACAGATTTGGCTGGGAAGGTCTACTTTTCGCAGGGGCTGTTGAGTATCTTGA-TGCAGAGGAAGAAGA-AGGTGTTATGATCGTCA?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1153] Tuber_gennadii_JT9627_Spain_paratype ????????????????????????????????????????????????TCCGTACTCTTTGGAGAAAA-CTCACAAAAGGATGTCTACAAAATATCTGGAGAAAATGCGTTGAAAACTAGC-AAAGATTTTAATTTGACTCTGGCTGTCAAGTCCAA-CACTATCACCAATGGCCTGAAATATTCTTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAAGTGCTGAACCGATACACCTTTGCCTCTACCCTCTCTCATCTACGGCGTACCAATACTCCTATCGGTAGAGACGGGAAAATCGCAAAGCCCCGC-CAGTTGCACAATACGCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAGGGGCAAGCCTGTGGTCTTGTTAAAAACCTGTCTCTAATGTC-TTATATTACGATCGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAATTGCTTGAGGAATATGAGCCTCAGC-GGTCTCCCAATGCTACCAAGGTTTTCGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCAAAGGTTGTTCAAGATGTGCGAAGGCAGGGTGTTGTCAGCCACGAAGTGAGCGTCATTCGTGATATCCGAGACAGAGAGTTCAAGATCTTT-ACGGATGCGGGGCGGGTTTGCCGTCCGCTTTTTG-TCATCGACAACGACCCTCGCAGCGAGCGACGAGGACAACTCGTCTTGCAGAAGGAGCATATAGAGAAGCTCGAA-GACGATCATC-AACTAGATATAGAGGACAGATTTGGCTGGGAAGGTCTACTATTTGCAGGGGCTGTTGAGTATCTTGA-TGCAGAGGAAGAAGA-AGGTGTTATGATTGTCATGACACCT-GA??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1150] Tuber_aestivum_JT30500_Sweden ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????TGGGGGCGAACAAAAGAAAGCGGCCTCTTCCAAGGCGGGTGTGTCTCAAGTATTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATTTACGGCGCACCAATACTCCTATCGGCAGAGACGGGAAAATTGCGAAGCCCCGC-CAGTTGCACAATACCCATTGGGGGTTGGTGTGCCCGGCCGAAACACCCGAAGGGCAGGCCTGCGGTCTTGTAAAAAACCTGTCTCTGATGTC-TTATATCACAATTGGCACTCCTGGG-TATCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAATTACTCGAGGAATATGAACCTCAGC-GGTCTCCCAATGCTACTAAGGTTTTCGTTAATGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAGGGTGTTGTCAGCCACGAAGTCAGCGTCATTCGTGATATCCGGGATAGAGAGTTCAAAATCTTC-ACAGATGCGGGGCGAGTTTGCCGTCCGCTTTTCG-TTATCGACAACGACCCCCGTAGCGAGCGACGAGGGCAGCTCGTCCTGCAAAAGGAGCATAT???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1158] Tuber_borchii_GB1_Italy ?????????????????????????????????????????????????????????????????????????????????????????????????GGAG-AAATGTGTTGAAACT-AGC-AAAGATTTCAATTTGACTTTGGCTGTCAAGTCTAA-CACTATCACTAATGGCCTGAAATATTCTTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGACGCACCAATACTCCTATCGGTAGAGATGGGAAAATCGCAAAACCTCGT-CAGTTGCACAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGACAAGCCTGTGGTCTTGTCAAAAACCTATCTCTGATGTC-TTATATCACGATTGGCACCCCCGGA-TACCCATTAGTTGACTTTTTGTCGTCTAATGATATGGAATTGCTCGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCTACTAAGGTTTTCGTTAACGGGGTCTGGGTTGG-TACCCATCGTGATCCTCTCATGTTAGCAAAGGTTGTTCAAGATGTGCGAAGGCAGGGTGTTGTCAGTCACGAAGTCAGTGTCATTCGTGATATCCGAGACAGAGAGTTCAAAATCTTT-ACAGATGCGGGGCGGGTTTG???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1155] Tuber_borchii_GB14_Italy ????????????????????????????????????????????????????????????GGAGAAAG-CTCACAAAGGACG-TCTAC-AAATATCTGGAG-AAATGTGTTGAAACT-AGC-AAAGATTTCAATTTGACTTTGGCTGTCAAGTCTAA-CACTATCACTAATGGCCTGAAATATTCTTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGACGCACCAATACTCCTATCGGTAGAGATGGGAAAATCGCAAAACCTCGT-CAGTTGCACAATACCCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGACAAGCCTGTGGTCTTGTCAAAAACCTATCTCTGATGTC-TTATATCACGATTGGCACCCCCGGA-TACCCATTAGTTGACTTTTTGTCGTCTAATGATATGGAATTGCTCGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCTACTAAGGTTTTCGTTAACGGGGTCTGGGTTGG-TACCCATCGTGATCCTCTCATGTTAGCAAAGGTTGTTCAAGATGTGCGAAGGCAGGGTGTTGTCAGTCACGAAGTCAGTGTCATTCGTGATATCCGAGACAGAGAGTTCAAAATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTTTTCG-TTATCGACAACGACCCTCGCAGCGAGCGACGAGGACAGCTTGTCCTGCAGAAGGA?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1151] Tuber_nitidum_BM105_Spain ???????????????????????????????????????????????????????????????????????????????????????????ATATCTGGAG-AAATGTGTTGAAACC-AGC-AAGGATTTCAATCTGACTTTAGCTGTTAAGTCTAA-CACTATCACCAATGGCCTAAAATATTCTTTGGCAACGGGTAATTGGGGCGAACAAAAGAAAGCAGCCTCTTCCAAGGCGGGTGTCTCTCAGGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGCACCAATACGCCTATTGGTAGAGATGGGAAAATCGCAAAGCCCCGC-CAGTTGCACAACACTCATTGGGGATTGGTTTGCCCGGCCGAAACACCCGAAGGGCAAGCCTGCGGTCTTGTGAAAAACCTGTCTCTGATGTC-TTATATTACGATTGGCACTCCCGGA-TACCCCTTGGTTGACTTTTTGTCGTCCAATGATATGGAACTGCTGGAAGAATATGAGCCTCAGC-GGTCTCCCAATGCTACCAAGGTTTTTGTTAACGGGGTCTGGGTTGG-AACCCATCGCGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAAGGTGTTGTCAGCCACGAAGTTAGCGTCATTCGCGATATCCGAGACAGAGAATTCAAGATCTTT-ACAGATGCGGGGCGGGTTTGCCGTCCGCTCTTCG-TTATCGACAACGACCCTCGCAGTGAGCGACGGGGACAACTCGTTCTGCAAAAGGAGCATATAGAAAAGCTCGAA-GACGATCATC-A?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1152] Tuber_shearii_OSC51052_North_Carolina ???????????????????????????????????????????????????????????????????????????????????????????ATATTTGGAG-AA?TGTGTTGAAACC-AGC-AAAGATTTCAATCTGACTTTGGCTGTTAAGTCCAA-CACTATCACTAATGGCCTAAAATATTCTTTGGCAACGGGTAACTGGGGCGAACAAAAGAAAGCAGCCTCCTCCAAGGCGGGTGTCTCTCAAGTGTTGAACCGGTATACCTTTGCCTCTACCCTCTCTCATCTACGGCGCACCAATACCCCTATCGGCAGGGACGGGAAAATCGCAAAGCCCCGC-CAATTGCACAATACCCATTGGGGGTTGGTTTGCCCGGCTGAAACACCTGAAGGGCAAGCCTGTGGTCTTGTCAAAAACCTGTCTCTTATGTC-TTATATCACGATTGGCACTCCCGGA-TACCCATTGGTTGACTTTTTGTCGTCTAATGACATGGAATTGCTTGAAGAATATGAGCCCCAAC-GGTCTCCTAATGCTACCAAGGTTTTCGTTAACGGGGTCTGGGTTGG-AACCCATCGTGATCCTCTCATGTTAGCGAAGGTTGTTCAAGATGTGCGAAGGCAGGGTGTTGTCAGCCATGAAGTCAGTGTCATTCGTGATATCCGAGATAGAGAGTTCAAAATCTTT????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? [1156] ; END; BEGIN SETS; CHARSET RPB2 = 5-68 70-342 344-461 463-526 528-573 575-692 694-802 804-881 883-897 899-923 925-932 934-1008 1010-1022 1024 1026-1122; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; EXSET * UNTITLED = 1-125 861-1165; END; BEGIN CODONS; CODONPOSSET * CodonPositions = N: 1-1165; CODESET * UNTITLED = Universal: all ; END; Begin trees; [Treefile saved Wednesday, January 12, 2011 9:26 PM] [! >Data file = RPB2_Dec2.nex >Heuristic search settings: > Optimality criterion = likelihood > 430 characters are excluded > Likelihood settings: > Number of substitution types = 2 (restriction of 6ST GTR model) > User-specified substitution rate matrix = > - 1.000000 13.421941 1.000000 > 1.000000 - 1.000000 13.421941 > 13.421941 1.000000 - 1.000000 > 1.000000 13.421941 1.000000 - > Assumed state frequencies (set by user): > A=0.25000 C=0.25000 G=0.25000 T=0.25000 > These settings correspond to a submodel of the SYM+G model (this is the K80=K2P+G model) > Among-site rate variation: > Assumed proportion of invariable sites = none > Distribution of rates at variable sites = gamma (discrete approximation) > Shape parameter (alpha) = estimated > Number of rate categories = 4 > Representation of average rate for each category = mean > Number of distinct data patterns under this model = 371 > Molecular clock not enforced > Starting branch lengths obtained using Rogers-Swofford approximation method > Trees with approximate likelihoods 5% or further from the target score are rejected > without additional iteration > Branch-length optimization = one-dimensional Newton-Raphson with pass limit=20, > tolerance=1e-07 > -ln L (unconstrained) = unavailable due to missing-data and/or ambiguities > Vector processing enabled > Conditional likelihoods rescaled when they drop below 1e-20 > > Starting tree(s) obtained via stepwise addition > Addition sequence: random > Number of replicates = 1 > Starting seed = 310827008 > Number of trees held at each step = 1 > Branch-swapping algorithm: tree-bisection-reconnection (TBR) with reconnection limit = 8 > Steepest descent option not in effect > Initial 'Maxtrees' setting = 100 (will be auto-increased by 100) > Branches collapsed (creating polytomies) if branch length is less than or equal to 1e-08 > 'MulTrees' option in effect > No topological constraints in effect > Trees are unrooted > >Heuristic search aborted during replicate #1 > Total number of rearrangements tried = 38904 > Score of best tree(s) found = 5880.021 > Number of trees retained = 1 > Time used = 23:26:32 (CPU time = 39:27:42.6) ] Translate 1 Helvella_macropus_MES198, 2 Helvella_lacunosa_MES218, 3 Helvella_lacunosa_MES286, 4 Helvella_acetabulum_MES215, 5 Balsamia_MES84, 6 Balsamia_SRC395, 7 Balsamia_SRC868, 8 Underwoodia_singeri_mes161_Chile, 9 Underwoodia_beatonii_JT28380_Australia, 10 Gymnohydnotrya_australiana_JT19760, 11 Gymnohydnotrya_australiana_OSC130601, 12 Labyrinthomyces_JT27750_Australia, 13 Labyrinthomyces_JT28821_Australia, 14 Dingleya_JT31575_Australia, 15 Reddellomyces_JT27723_Australia, 16 Reddellomyces_JT4985_Australia, 17 Reddellomyces_JT27724_Australia, 18 Reddellomyces_JT6873_Australia, 19 Choiromyces_alveolatus_97, 20 Choiromyces_meandriformis_DL_Oregon, 21 Nothojafnia_cf_thaxterii_N10_Argentina, 22 Choiromyces_meandriformis_RH691_Iowa, 23 Tuber_sp_ITCV910_Mexico, 24 Tuber_sp_RH73_Iowa, 25 Tuber_aestivum_GB202_Italy, 26 Tuber_sp1_K201_Japan, 27 Tuber_sp2_K215_Japan, 28 Tuber_sp8_K228_Japan, 29 Tuber_sp9_K213_Japan, 30 Tuber_sp14_K186_Japan, 31 Tuber_gennadii_BM667_Spain, 32 Tuber_canaliculatum_OSC59072_West_Virginia, 33 Tuber_cf_borchii_China, 34 Tuber_indicum_A_GB236_China, 35 Tuber_indicum_A_GB240_China, 36 Tuber_sp_RH8270753_Iowa, 37 Tuber_regimontanum_ITCV909_Mexico_holotype, 38 Tuber_sp_ITCV908_Mexico, 39 Tuber_lyonii_GA21_Georgia, 40 Tuber_beyeleri_JT32597_Oregon, 41 Tuber_gibbosum_JT26632_Washington, 42 Tuber_gibbosum_JT30580_Oregon, 43 Tuber_oregonense_GB284_Oregon_holotype, 44 Tuber_oregonense_JT30493_Oregon_paratype, 45 Tuber_castellanoi_JT28069_California_holotype, 46 Tuber_bellisporum_JT11679_Oregon_holotype, 47 Tuber_brumale_GB21_Italy, 48 Tuber_brumale_GB22_Italy, 49 Tuber_canaliculatum_JT28215_New_Jersey, 50 Tuber_dryophilum_GB37_Italy, 51 Tuber_magnatum_GB12_Italy, 52 Tuber_magnatum_GB13_Italy, 53 Tuber_malacodermum_JT32319_Spain, 54 Tuber_melanosporum_GB200_Italy, 55 Tuber_mesentericum_CW105_Sweden, 56 Tuber_sp_JT13224_West_Virginia, 57 Tuber_spinoreticulatum_U188_Maryland_isotype, 58 Tuber_indicum_B_JT29410_Oregon, 59 Tuber_californicum_JT28058_California, 60 Tuber_lyonii_OSC58244_Texas, 61 Tuber_asa_M1828_Italy, 62 Tuber_gennadii_M1904_Italy, 63 Tuber_gennadii_JT9627_Spain_paratype, 64 Tuber_aestivum_JT30500_Sweden, 65 Tuber_borchii_GB1_Italy, 66 Tuber_borchii_GB14_Italy, 67 Tuber_nitidum_BM105_Spain, 68 Tuber_shearii_OSC51052_North_Carolina ; tree PAUP_1 = [&R] ((((1:0.02502194,4:0.03258101):0.01027832,(2:0.00808317,3:0.00713730):0.03786639):0.06673767,((5:0.00308562,7:0.00182820):0.01708121,6:0.01512031):0.12477948):0.18336127,(((8:0.01577703,9:0.03072222):0.00787084,(10:0.00000001,11:0.00000001):0.01007193):0.06449499,((((((12:0.00121084,13:0.00365633,16:0.00121084):0.00411923,15:0.00326819):0.00801163,(14:0.01163989,(17:0.00163510,18:0.00478026):0.01104562):0.00149854):0.00053728,21:0.02699529):0.04501916,(19:0.00966184,(20:0.00243885,22:0.00000001):0.01240483):0.01638664):0.01742367,(((((((23:0.01552529,36:0.01213596):0.00794242,(53:0.01045980,56:0.01260572,67:0.00396086):0.00636709):0.00091143,(38:0.00429839,39:0.00365595,60:0.00000001):0.00769895):0.00940621,57:0.02170230):0.00416505,(24:0.01405283,(((((34:0.00000001,35:0.00000001):0.00263451,58:0.00121324):0.00124896,54:0.00242585):0.00330720,37:0.00566371):0.01179485,(47:0.00000001,48:0.00000001):0.02286470):0.01643471):0.00346594):0.00644551,(((25:0.00279924,64:0.00217322):0.02323318,55:0.01375062):0.02110773,(51:0.00149690,52:0.00000140):0.01982811):0.01137539):0.00180677,(((((26:0.02288588,27:0.01487112):0.00521683,(32:0.00268383,49:0.00000001):0.00846991):0.01346577,((((((30:0.00768581,33:0.00775769):0.00106657,50:0.00629075):0.00239379,59:0.00655427,(65:0.00000001,66:0.00000001):0.01417349):0.00343548,61:0.01570918):0.00983845,(40:0.01551510,68:0.01810766):0.01197817):0.00478680,(((41:0.00000001,42:0.00000001):0.00712222,45:0.00409678):0.00656975,(43:0.00128636,(44:0.00000001,46:0.00369573):0.00575577):0.01305987):0.02972115):0.00248058):0.00361972,(28:0.00608993,29:0.01850197):0.01589985):0.00176866,((31:0.00000001,63:0.00000001):0.01041619,62:0.00903446):0.02533836):0.00088604):0.02126349):0.12565378):0.11321569):0; End; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1292; END; BEGIN MacClade; Version 4.0 84; LastModified -920381296; FileSettings editor '0' '0' '1' '1'; Singles 000; Editor 0001100111111110010001001 '1' '12' Geneva '10' '432' '1' all; EditorPosition '44' '31' '723' '1091'; TreeWindowPosition '46' '6' '671' '1102'; ListWindow Characters closed Geneva '9' '50' '10' '273' '406' 000; ListWindow Taxa closed Geneva '9' '50' '10' '276' '490' 100000; ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ; ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow ExSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharSets closed Geneva '9' '50' '10' '129' '181' ; ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharPartitions closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharPartNames closed Geneva '9' '50' '10' '276' '490' ; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ; ChartWindowPosition '52' '30' '638' '1092'; StateNamesSymbols closed Geneva '9' '10' '50' '30' '148' '220'; WindowOrder Data; OtherSymbols &/ 00 ?-; Correlation '0' '0' '1000' '0' '0' 10011010; Salmo 00000001; EditorFile '4'; ExportHTML _ MOSS '100' 110000; PrettyPrint 10; EditorToolsPosition '54' '252' '142' '138'; TreeWindowProgram 10; TreeWindow 0000; Continuous '0' '3' 1; Calculations 0000001; SummaryMode '0' '0' 0; Charts Geneva '9' (normal) 0010; NexusOptions '0' '0' '50' 001001011; TipLabel '1'; TreeFont Geneva '9' (normal); TreeShape 1.0 1.0 0100; TraceLabels 0101; ChartColors '0' '0' '65535' '9' '0' 1; ChartBiggestSpot 1; ChartPercent 10; ChartBarWidth '10' 1; ChartVerticalAxis 10101; ChartMinMax '0'; TraceAllChangesDisplay '1' 1; BarsOnBranchesDisplay '0' '0' '60000' '10000' '10000' '10000' '10000' '60000' '65000' '65000' '65000' '6' '1' 0000101; ContinuousBranchLabels 0; AllStatesBranchLabels 1; IndexNotation '2' 1; PrintTree 10.00 '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' Geneva '9' (normal) Geneva '10' (normal) Geneva '9' (normal) Geneva '9' (normal) Geneva '9' (bold ) Geneva '9' (normal) Geneva '9' (normal) '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '1' '1' '1' '1' '0' '-4245' '-39' '4' '-40' '0' '1' '2' '1' '8' '0' '0' '0' '2' 1000111000000000000100000111000; MatchChar 00 .; EntryInterpretation 01; ColorOptions 00; TreeTools '0' '5' '4' '0' '10' '4' '0' 00100111111101110; EditorTools '0' '0' '0' '1000' '0' '0' '5' '4' '0' 110010101110001; PairAlign '2' '2' '3' '2' '1' '1' '2' '1' '3' 1011; BothTools '1'; END; BEGIN MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 4068946943676534181; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 8338118809519158523; checksum 0 1312605808 null; endTell; getWindow; tell It; setResourcesState false false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 464; setLocation 8 22; setFont SanSerif; setFontSize 10; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #8338118809519158523 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 600 397; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; END;