#NEXUS [written Wed Jan 09 23:13:39 CET 2013 by Mesquite version 2.75 (build 566) at Cobus-Visagies-MacBook-Pro.local/127.0.0.1] BEGIN TAXA; TITLE 'Section_Sclerotiora_CMD_Taxa'; DIMENSIONS NTAX=52; TAXLABELS Penicillium_guanacastense_DAOM239912T Penicillium_guanacastense_DAOM239913 Penicillium_herquei_CBS136_22 Penicillium_herquei_CBS336_48T Penicillium_mallochii_DAOM239917T Penicillium_mallochii_DAOM239925 Penicillium_sclerotiorum_NRRL2074T Penicillium_adametzioides_CBS313_59T Penicillium_adametzioides_DAOM239916 Penicillium_cainii_DAOM239914T Penicillium_cainii_DAOM239915 Penicillium_jacksonii_DAOM239937T Penicillium_jacksonii_DAOM239938 Penicillium_viticola_JCM17636T Penicillium_viticola_DAOM239933 Penicillium_johnkrugii_DAOM239943T Penicillium_johnkrugii_DAOM239944 Penicillium_sclerotiorum_CBS128_65 Penicillium_sclerotiorum_CBS258_55 Penicillium_sclerotiorum_CBS118889 Penicillium_multicolor_CBS501_73T Penicillium_adametzii_AS34470 Penicillium_adametzii_AS35708 Penicillium_angulare_NRRL35630 Penicillium_angulare_NRRL35633 Penicillium_bilaiae_ATCC20851 Penicillium_bilaiae_ATCC22348 Penicillium_bilaiae_DAOM197974 Penicillium_bilaiae_NRRL3391T Penicillium_brocae_NRRL31472T Penicillium_brocae_NRRL31462 Penicillium_hirayamae_CBS229_60T Penicillium_hirayamae_CBS238_65 Penicillium_bilaiae_CV0231 Penicillium_bilaiae_CV0387 Penicillium_sclerotiorum_CV0934 Penicillium_bilaiae_CV0988 Penicillium_bilaiae_CV1213 Penicillium_bilaiae_CV1273 Penicillium_bilaiae_CV1429 Penicillium_compactum_CV0112 Penicillium_compactum_CV0204 Penicillium_compactum_CV0227 Penicillium_compactum_CV1875 Penicillium_compactum_CV0401 Penicillium_bilaiae_CBS221_66 Penicillium_bilaiae_CV0255 Penicillium_bilaiae_CV0335 Penicillium_compactum_CV1722 Penicillium_hirayamae_CV887 Penicillium_hirayamae_CV916 Penicillium_levitum_NRRL705T ; END; BEGIN CHARACTERS; TITLE 'Section_Sclerotiora_CMD_Matrix'; DIMENSIONS NCHAR=478; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Penicillium_guanacastense_DAOM239912T TTGA----------AAGACTCGTGACT-GGATTT--AATGCTGATGGATAT-GT-TCTC--C--GGC-GATAGGACAAGGATGGTGATGGTTAGTGCGACCGTCGGCGA-----------------TTTTTTTAAA--ACTCCATGCCGACTGGAGTAT-TCCCACTGAGAGGACCGAATAACTGAGACCGAT-CGATTT-ATA-GACAAATCACCACCAAGGAGTTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCCGAGCTCCAGGACATGATTAACGAAGTCGATGCCGACAACAACGGTACCATTGACTTCCCTGGTACGA-TTTCC----CTCCCACTCGAATCAT----CCCGTCCTA-------GTCTCC----GGACATATGTTAA---------CA-TGC-GA--CACAGAGTTCCTTACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_guanacastense_DAOM239913 TTGG----------AAGACTCGTGACT-GGATTT--AATGCTGATGGATAT-GT-TCTC--C--GGC-GATAGGACAAGGATGGTGATGGTTAGTGCGACCGTCGGCGA-----------------TTTTTTTAAA--ACTCCATGCCGACTGGAGTAT-TCCCACTGAGAGGACCGAATAACTGAGACCGAT-CGATTT-ATA-GACAAATCACCACCAAGGAGTTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCCGAGCTCCAGGACATGATTAACGAAGTCGATGCCGACAACAACCGTACCATTGACTTCCCTGGTACGA-TTTCC----CTCCCACTCGAATCAT----CCCGTCCTA-------GTCTCC----GGACATATGTTAA---------CA-TGC-GA--CACAGAGTTCCTTACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_herquei_CBS136_22 TTGA-----------ATGCCGTGGTTCAAAATTC--AATACTAATGGATA-----TTCG--T--CAT-AATAGGACAAGGATGGCGATGGTGAGTGCGACCGTTACCGA-------------------------GA--TCTGCGGACCGACT--ATCAC-GCCCATTGAGAGGA-TAAATTACTGAGTTGGAT-GAATTATA---GCCAGATCACTACCAAGGAGCTGGGTACCGTTATGCGTTCTCTCGGCCAGAACCCTTCCGAGTCTGAGCTGCAGGACATGATTAACGAGGTTGACGCTGACAACAACGGCACCATTGATTTCCCTGGTACGG-TCCCT-----ATGTCCTCGACGGACTCGACTTTATATT-------CCTTTC----GGACCAGTATTGA---------TA-CCT-TT--TGCAGAGTTCCTTACCATGATGGCCCGTAAGATGAAGGATACCGACTCCGAG Penicillium_herquei_CBS336_48T TTGC-----------ATACTGTGTTTTCAAATTC--AATACTGATGCATA-----TTCG--T--CAT-AATAGGACAAGGATGGCGATGGTGAGTGCGACCGTTACCGA-------------------------GA--TCTGCGGACCGACT--ATCAC-GCCCATTGAGAGGA-TAAATAACTGAGTTGGAT-GAATTATA---GCCAGATCACCACCAAGGAGCTGGGTACCGTCATGCGTTCCCTCGGCCAGAACCCTTCCGAGTCTGAGCTGCAGGACATGATTAACGAGGTTGACGCTGACAACAACGGCACCATTGATTTCCCTGGTACGA-CCTCT-----ATGTCCTCGACGAACTCGATTTTATCTC-------CTTTTC----GGATCAGTATTGA---------CA-CCT-TT--TGCAGAGTTTCTTACCATGATGGCCCGTAAGATGAAGGATACCGACTCCGAG Penicillium_mallochii_DAOM239917T TTGG----------AAGATCTGTAACT-GGATTT--AATGCTGATGGATAT-GT-TCTC--C--GGC-AATAGGACAAGGATGGCGATGGTTAGTGCGACCGTCGGCGA-----------------TTTTTT--AA--ATTCCATGCCGACTGGAGTAA-ACCCACTGAGAGAACCGAATAACTGAGACCGAT-CGATCT-ATA-GACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCCGAGCTTCAGGACATGATCAACGAGGTCGACGCCGACAACAACGGCACCATTGACTTCCCTGGTACGA-TTTCC----CTTCCGATCG---GAC----CCCCTGCTC--------CCTCC----GGATAGATGTTAA---------CG-TGC-GG--CACAGAGTTCCTGACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_mallochii_DAOM239925 TTGG----------AAGATCTGTAACT-GGATTT--AATGCTGATGGATAT-GT-TCTC--C--GGC-AATAGGACAAGGATGGCGATGGTTAGTGCGACCGTCGGCGA-----------------TTTTTT--AA--ATTCCATGCCGACTGGAGTAA-ACCCACTGAGAGAACCGAATAACTGAGACCGAT-CGATCT-ATA-GACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCCGAGCTTCAGGACATGATCAACGAGGTCGACGCCGACAACAACGGCACCATTGACTTCCCTGGTACGA-TTTCC----CTTCCGATCG---GAC----CCCCTGCTC--------CCTCC----GGATAGATGTTAA---------CG-TGC-GG--CACAGAGTTCCTGACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_sclerotiorum_NRRL2074T TTGA----------AACCCTCGTGACT-GGATTT--AATGCTGATGGATAT-GT-TCTC--C--GGC-AATAGGACAAGGATGGTGATGGTTAGTGCGACCGTCGGCGA-----------------TTTTTT--AA--ATTCCATACCGACTGGAGTAT-ACTCGCTGAGGGAACCGAATAACTGAGATCGAT-TAATCT-ATA-GACAAATCACCACCAAGGAGCTGGGCACCGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCCGAGCTTCAGGACATGATCAACGAGGTCGACGCCGACAACAACGGCACCATTGACTTCCCTGGTACGA-TTTCC----CTTCCACTCGAATGAC----CCCGTGCTTCGTACTCGCTTCC----GGACATATGTTAA---------CA-TGC-GG--CACAGAGTTCCTGACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_adametzioides_CBS313_59T TTGAGAAAGAAAAAGA----GTTGCCTAGAAACC--AAGACTAATGGATACTTT-TTCC--C--GGT-AACAGGACAAGGATGGCGATGGTGAGTGCGATCGTTATCAAGC--------------TCGAT----GA--TTTGAGGACCGATTATGTCTT-CTATGTTGAGCGAA-CGAATAACTGAGACGAAT-ACACTCGATAGGACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGTCAGAACCCCTCCGAGTCCGAGCTGCAGGACATGATCAACGAGGTCGACGCCGATAACAACGGTACCATTGACTTCCCTGGTACGA-TTTCC----CTCCCCTCCGAATAAC----CCA-------------AGCCTCGAA-ACACTCGTATTGA---------TA-TGTGGA--CACAGAGTTCCTTACCATGATGGCGCGTAAGATGAAGGACACCGACTCCGAG Penicillium_adametzioides_DAOM239916 TTGTGAAAAGAAAAAAAAATGTTGCCTAGAAACC--AAGACTAATGGATACTTT-TTCC--C--GGT-AACAGGACAAGGATGGCGATGGTGAGTGCGATCATTATCGAGC--------------TCGAT----GA--TTTGAGGACCGATTATGTCCT-CTATGTTGAGCGAA-CGAATAACTGAGACGAAT-ACACTTGATAGGACAAATTACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGTCAGAACCCCTCCGAGTCCGAGCTGCAGGACATGATCAACGAGGTCGACGCCGATAACAACGGTACCATTGACTTCCCTGGTACGA-TCTCC----CTACCCTCCGAATAAC----CCA-------------AGCCTCGAA-ACAATCGTATTGA---------TA-TGTGGA--CACAGAGTTCCTTACCATGATGGCGCGTAAGATGAAGGACACCGACTCCGAG Penicillium_cainii_DAOM239914T TTGG----------AACAGTCATGACT-GGATTT--AATGCTGATGGATAT-GT-TCTC--C--GGC-AATAGGACAAGGATGGTGATGGTTAGTGCGACCGTCGGCGATT--------------TTTTTTT--AA--CCTCCATGCCGACTGGAGTAT-ACCCCCTAAGAGAACCGAATAACTGAGACCGAT-CAAACT-ATAGGACAAATCACCACCAAGGAGTTGGGCACCGTCATGCGCTCCCTCGGTCAGAACCCCTCCGAGTCCGAGCTTCAGGACATGATCAACGAGGTCGATGCCGACAACAACGGCACCATTGACTTCCCTGGTACGATTTCCC----TTTCCATTCGAATTAC----CCCGTGCTT-------TCCTCC----GGACATATGTTAA---------CG-CCC-GA--CACAGAGTTCCTCACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_cainii_DAOM239915 TTGG----------GACAGTCATGACC-GGATTT--AATGCTGATGGATAT-GT-TCTC--C--GGC-AATAGGACAAGGATGGTGATGGTTAGTGCGACCGTCGGCGATT--------------TTTTTTT--AA--CCTCCATGCCGACTGGAGTAT-ACCCCCTAAGAGAACCGAATAACTGAGACCGAT-CAAACT-ATAGGACAAATCACCACCAAGGAGTTGGGCACCGTCATGCGCTCCCTCGGTCAGAACCCCTCCGAGTCCGAGCTTCAGGACATGATCAACGAGGTCGATGCCGACAACAACGGCACCATTGACTTCCCTGGTACGATTTCCC----TTTCCATTCGAATTAC----CCCGTGCTT-------TCCTCC----GGACATATGTTAA---------CG-CCC-GA--CACAGAGTTCCTCACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_jacksonii_DAOM239937T TTGG----------AAGATTCGTGACT-GGATTT--AATGCTGATGGATAT-GT-TCTC--C--GGC-AATAGGACAAGGATGGCGATGGTTAGTGCGACCGTCGGCGATT--------------TTTTTTT--TA--ACTCCATGCCGACTGGAGTAT-ACCCCCTAAGAGAACCGAATAACTGAGACCGAT-CAAACT-GTAGGACAAATCACCACCAAGGAGTTGGGCACCGTCATGCGCTCCCTCGGTCAGAACCCCTCCGAGTCCGAGCTCCAGGACATGATCAACGAGGTTGATGCCGACAACAACGGCACCATTGACTTCCCTGGTACGA-TTCCC----TTTCCATTCGAATGAC----CCCGTGCTT-------TGCTCC----GGACATCTGTTAA---------CA-CGC-GG--TACAGAGTTCCTTACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_jacksonii_DAOM239938 TTGG----------AAGATTCGTGACT-GGATTT--AATGCTGATGGATAT-GT-TCTC--C--GGCAAATAGGACAAGGATGGTGATGGTTAGTGCGACCGTCGGCGATT---------------TTTTTT--TA--ACTCCATGCCGACTGGAGTAT-ACCCCCTAAGAGAACCGAATAACTGAGACCGAT-CAAACT-GTAGGACAAATCACCACCAAGGAGTTGGGCACCGTCATGCGCTCCCTCGGTCAGAACCCCTCCGAGTCCGAGCTCCAGGACATGATCAACGAGGTTGATGCCGACAACAACGGCACCATTGACTTCCCTGGTACGA-TTCCC----TTTCCATTCGAATGAC----CCCGTGCTT-------TGCTCC----GGACATCTGTTAA---------CA-CGC-GG--TACAGAGTTCCTTACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_viticola_JCM17636T TTGG----------AAGTGTCGTGACT-GGATTT--AATGCTGATGGATAT-GT-TCTC--C--GGT-AATAGGACAAGGATGGTGATGGTTAGTGCGACCGTCGGCGATT---------------TTTTTT--TA--CCTCCATGCCGACTGGAGTATACCTCACTAAGAGAACCGAATAACTGAGACCGAT-CAAACT-ATAGGACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGTCAGAACCCCTCCGAGTCCGAGCTTCAGGACATGATCAACGAGGTCGATGCCGACAACAACGGCACCATTGACTTCCCTGGTACGA-TTCCC----TTTCTATTCGAATGAC----CCCGAGCTC-------GCCTCC----GGACGTATGTTAA---------CT-CGC-GG--TACAGAGTTCCTTACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_viticola_DAOM239933 TTGC----------AGTAGTCGTGCCT-GGATTT--AATGCTGATGGATAT-GTCTCTC--C--GGC-AATAGGACAAGGATGGTGATGG-TAGTGCGACCGTCGGCCGAT---------------TTTTTT--TA--CCTCCATGCCGACTGGAGTATAACTCACTAAGAGAACCGAATAACTGAGACCGAT-CAAACT-ATAGGACAAATCACCCCCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGTCAGAACCCCTCCGAGTCCGAGCTTCAGGACATGATCAACGAGGTCGATGCCGACAACAACGGCACCATTGACTTCCCTGGTACGA-TTCCC----TTTCTATTCGAATGGC----CCCGTGCTC-------GCCTCC----GGACGTATGTTAA---------CT-CGC-GG--TACAGAGTTCCTTACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_johnkrugii_DAOM239943T TTGG----------AAGATTTGTAACT-GGATTT--AATGCTGATGGATAT-GT-TCTC--C--GGC-AATAGGACAAGGATGGCGATGGTTAGTGCGACCGTCGGCGA-----------------TTTTTT--GA--ATTCCATGCCGACTGGAGTAT-ACCCACTGAGAGAACCGAATAACTGAGACCGAT-CGATCT-ATAGGACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCTCTCGGCCAGAACCCCTCCGAGTCCGAGCTTCAGGACATGATCAACGAGGTCGATGCCGACAACAACGGCACCATTGACTTCCCTGGTACGA-TTTCC----CTTCCACCCGAAAGGC----CCCGTGCTT--------CCTCC----GGATAGATGTTAA---------CG-AAA-GG--CACAGAATTCCTGACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_johnkrugii_DAOM239944 TTGG----------AAGATCTGTGATC-GAATTT--AATGCTGATGGATAT-GT-TCTC--C--GGC-AATAGGACAAGGATGGCGATGGTTAGTGCGACCGTCGGCGA-----------------TTTTTT--AA--ATTCCATGCCGACTGGAGTAT-ACCCACTGAGAGAACCGAATAACTGAGACCGAT-CGATCT-ATAGGACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCTCTCGGCCAGAACCCCTCCGAGTCCGAGCTTCAGGACATGATCAACGAGGTCGATGCCCACAACAACGGCACCATTGACTTCCCTGGTACGA-TTTCC----CATTCACCCGAAAGGC----CCCGTGCTT--------CCTCC----GGATAGATGTTAA---------CG-TGC-GG--CACAGATTTCCTGACCATGATGGCCCGTAAGATGAAGGACACCGTCTCCGAG Penicillium_sclerotiorum_CBS128_65 TTGA----------AACCCTCGAGGTT-GGATTT--AATGCTGATGGATAT-GT-TTTC--C--GGC-AATAGGACAAGGATGGTGATGGTTAGTGCGACCGTCGGCGA-----------------TTTTTT--AA--ATTCCATGCCGACTGGAGTAT-ACCCACTGAGAGAACCGAATAACTGAGACCGAT-CAATCT-ATAGGACAAATCACCACCAAGGAGCTGGGCACCGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCCGAGCTTCAGGACATGATCAACGAGGTCGACGCCGACAACAACGGCACCATTGACTTCCCTGGTACGA-TTTCC----CTTCCACTCGAATGAC----CCTATGCTCCGTGCTCGCCTCC----GAACCTATATTAA---------CA-TGC-GG--CACAGAGTTCCTGACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_sclerotiorum_CBS258_55 TTGA----------AACCCTCGTGGTT-GGATTT--AATGCTGATGGATAT-GT-TCTG--C--GGC-AATAGGACAAGGATGGTGATGGTTAGTGCGACCGTCGGCGA-----------------TTTTTT--AA--ATTCC-TGCCGACTGGAGTAT-ACCCACTGAGAGAACCGAATAACTGAGACCGAT-CAATCT-ATAGGACAAATCACCACCAAGGAGCTGGGCACCGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCCGAGCTTCAGGACATGATCAACGAGGTCGACGCCGACAACAACGGCACCATTGACTTCCCTGGTACGA-TTTCC----CTTCCACTCGAATGAC----CCTATGCTCCGTGCTCGCCTCC----GAACCTATATTAA---------CA-TGC-GG--CACAGAGTTCCTGACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_sclerotiorum_CBS118889 TTGA----------AACCCTCGTGACT-GGATTT--AATGCTGATGGATAT-GT-TCTC--C--GGC-AATAGGACAAGGATGGTGATGGTTAGTGCGACCGTCGGCGA-----------------TTTTTT--AA--ATTCCATGCCGACTGGAGTAT-ACCCACTGAGAGAACCGAATAACTGAGACCGAT-CAATCT-ATAGGACAAATCACCACCAAGGAGCTGGGCACCGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCCGAGCTTCAGGACATGATCAACGAGGTCGATGCCGACAACAACGGCACCATTGACTTCCCTGGTACGA-TTTCC----CTTCCACTCGAATGAC----CCCGTGCTCCGTGCTCGCCTCC----GAACCTATATTAA---------CA-TGC-GG--CACAGAGTTCCTGACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_multicolor_CBS501_73T TTGCGAAT-------TTTGTTTGGCCT-AGGGGA--AACGCAGCTAACCATGTTATTTT--C------AACAGGACAAGGATGGCGATGGTGAGTGC-----CCGACGACA--------------CCAGACATAAAAGTCCCCCAGCAATTGGAATCAT-TTTTA-----------------CTGAGACGAA--ATGGTGATTAGGACAAATCACCACCAAGGAGCTTGGCACTGTCATGCGCTCGCTTGGCCAGAACCCCTCCGAGTCTGAGCTGCAGGACATGATCAACGAAGTCGACGCCGATAACAACGGCACCATTGATTTCCCCGGTACAAAATTGCTGCACCACCCCCTCT---------CCGGCCCTTCTCAGCTGACCC-----GGACTGTTACTGA------------TTT-CG--ACTAGAATTCCTTACCATGATGGCCCGCAAGATGAAGGATACCGACTCAGAG Penicillium_adametzii_AS34470 TTGA-----------AGGATGCTGCCT-AGAACCGAAATACTAATGGATAC-TT-TTCC--C--GGT-AACAGGACAAGGATGGCGATGGTGAGTGCGATCGTCTTCGAT------------------------GA--CTTCAGATCAGATTGTGCTCT-CTCCATTGAGCGAA-CGAATAACTAAGACGAATAAAATTCAACAGGCCAGATCACTACCAAGGAGCTGGGCACTGTCATGCGCTCTCTCGGCCAGAACCCCTCCGAGTCCGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAATAACGGTACAATTGACTTCCCTGGTACGA-TATGC----CTCCCCTATATTCAAGAAACCC--------------AACCTA----GGACTCGTATTGA---------CA-TGC-GA--CACAGAGTTCCTTACCATGATGGCGCGTAAGATGAAGGATACCGACTCCGAG Penicillium_adametzii_AS35708 TTGA-----------AGGATGCTGCCT-AGAACCGAAATACTAATGGATAC-TT-TTCC--C--GGT-AACAGGACAAGGATGGCGATGGTGAGTGCGATCGTCTTCGAT------------------------GA--CTTCAGATCAGATTGTGCTCT-CTCCATTGAGCGAA-CGAATAACTAAGGCGAATAAAATTCAACAGGCCAGATCACTACCAAGGAGCTGGGCACTGTCATGCGCTCTCTCGGCCAGAACCCCTCCGAGTCCGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAATAACGGTACAATTGACTTCCCTGGTACGA-TATGC----CTCCCCTATATTCAAGAAACCC--------------AACCTA----GGACTCGTATTGA---------CA-TGC-GA--CACAGAGTTCCTTACCATGATGGCGCGTAAGATGAAGGATACCGACTCCGAG Penicillium_angulare_NRRL35630 TTGAGAAGAGAGTAAAAATGCTGCCTTAAAAACC--AATACTAATGGATAC-TT-TTCC--C--GAT-AACAGGACAAGGATGGCGATGGTGAGTGCGATCGTTATCGGAC--------------TCGAT----GA--TTT-AAAACCGATTATGTACT-CTATATCAAGTGAA-CGAGTGACTGAGACGAAT-AAACTCGATAGGACAAATCACTACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGTCAGAACCCCTCCGAGTCCGAGCTGCAGGACATGATCAACGAGGTCGACGCCGATAACAACGGTACCATTGACTTCCCTGGTACGA-TCTCC----CT---CTCCGAATAAT----CCA-------------AGCCTCGGA-ATAATTGCATTGA---------CA-TGCGGA--CACAGAGTTTCTTACCATGATGGCGCGTAAGATGAAGGACACCGACTCCGAG Penicillium_angulare_NRRL35633 TTGAGAAGAGAGTAAAAATGCTGCCTTAAAAACC--AATACTAATGGATAC-TT-TTCC--C--GAT-AACAGGACAAGGATGGCGATGGTGAGTGCGATCGTTATCGGAC--------------TCGAT----GA--TTT-AAAACCGATTATGTACT-CTATATCAAGTGAA-CGAGTGACTGAGACGAAT-AAACTCGATAGGACAAATCACTACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGTCAGAACCCCTCCGAGTCCGAGCTGCAGGACATGATCAACGAGGTCGACGCCGATAACAACGGTACCATTGACTTCCCTGGTACGA-TCTCC----CT---CTCCGAATAAT----CCA-------------AGCCTCGGA-ATAATTGCATTGA---------CA-TGCGGA--CACAGAGTTTCTTACCATGATGGCGCGTAAGATGAAGGACACCGACTCCGAG Penicillium_bilaiae_ATCC20851 TTGG-AAA-----AAAAAGCGTCGCCT-GGAATC--AACACTAATGGATGC-TT-TTTC--CCGGGA-AATAGGACAAGGATGGCGATGGTGAGTGCGATCGTACTCGGGC--------------TCGAT----AA-TTTCAAGATCCGATTATGTCCT-CTTGACCGAGTGAA-CAAATCACTGAGATGAAT-AAATTCGATA-GACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCTTCCGAGTCTGAGCTGCAGGATATGATCAACGAGGTCGCCGCCGATAATAACGGTACCATCGATTTCCCTGGTACGC-TCTCC----CTCCCCTCCGAATGATGATCTCA-------------AGCCCCGAGAAGACTGATATTGA---------CATTGC-GA--CACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAG Penicillium_bilaiae_ATCC22348 TTGG-AAA-----AAAAAGCGTCGCCT-GGAATC--AACACTAATGGATGC-TT-TTTC--CCGGGA-AATAGGACAAGGATGGCGATGGTGAGTGCGATCGTACTCGGGC--------------TCGAT----AA-TTTCAAGATCCGATTATGTCCT-CTTGACCGAGTGAA-CAAATCACTGAGATGAAT-AAATTCGATA-GACAAACCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCTTCCGAGTCTGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAATAACGGTACCATCGATTTCCCTGGTACGC-TCTCC----CTCCCCTCCGAATGATGATCTCA-------------AGCCCCGAGAAGACTGATATTGA---------CATTGC-GA--CACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAG Penicillium_bilaiae_DAOM197974 TTGG-AAA-----AAAAAGCGTCGCCT-GGAATC--AACACTAATGGATGC-TT-TTTC--CCGGGA-AATAGGACAAGGATGGCGATGGTGAGTGCGATCGTACTCGGGC--------------TCGAT----AA-TTTCAAGATCCGATTATGTCCT-CTTGACCGAGTGAA-CAAATCACTGAGATGAAT-AAATTCGATA-GACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCTTCCGAGTCTGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAATAACGGTACCATCGATTTCCCTGGTACGC-TCTCC----CTCCCCTCCGAATGATGATCTCA-------------AGCCCCGAGAAGACTGATATTGA---------CATTGC-GA--CACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAG Penicillium_bilaiae_NRRL3391T TTGGAAAA-----AAAAAGCGTCGCCT-GGAATC--AACACTAATGGATGC-TT-TTTC--CCGGGA-AATAGGACAAGGATGGCGATGGTGAGTGCGATCGTACTCGGGC--------------TCGAT----AA-TTTCAAGATCCGATTATGTCCT-CTTGACCGAGTGAA-CAAATCACTGAGATGAAT-AAATTCGATA-GACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCTTCCGAGTCTGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAATAACGGTACCATCGATTTTCCTGGTACGC-TCTCC----CTCCCCTCCGAATGATGATCTCA-------------AAGCCCGAGAAGACTGATATTGA---------CATTGC-GA--CACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAG Penicillium_brocae_NRRL31472T CTAGAAAA-----ATAAAACGTTGCCT-AAAACC--AATACTAATGGATAC-TT-TTCC--C--GGT-AATAGGACAAGGATGGCGATGGTGAGTGCGACCGTCTTCGATA--------------CCGAT----GA--TTTTAGATGCGATCACGCCTG-ATTTATCGATTGAA-CAAATAACTGAGACGAAT-AAACTCGACAGGCCAGATTACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCTGAGTTGCAGGACATGATTAACGAGGTTGACGCTGATAACAACGGAACCATTGACTTCCCTGGTACGA-CCGTC----CTTCCCTTCGAACGAT----TCA-------------AGCTCC----AGACCCATATTAA---------CA-TGC-GA--CACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAG Penicillium_brocae_NRRL31462 CTAGAAAA-----ATAAAACGTTGCCT-AAAACC--AATACTAATGGATAC-TT-TTCC--C--GGT-AATAGGACAAGGATGGCGATGGTGAGTGCGACCGTCTTCGATA--------------CCGAT----GA--TTTTAGATGCGATCACGCCTG-ATTTATCGATTGAA-CAAATAACTGAGACGAAT-AAACTCGACAGGCCAGATTACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCTGAGTTGCAGGACATGATTAACGAGGTTGACGCTGATAACAACGGAACCATTGACTTCCCTGGTACGA-CCGTC----CTTCCCTTCGAACGAT----TCA-------------AGCTCC----AGACCCATATTAA---------CA-TGC-GA--CACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAG Penicillium_hirayamae_CBS229_60T TTGA-----------AGACCCATGACT-GGATTT---ATACTGATAAATAC-GT-TCTG--C--TTC-AATAGGACAAGGACGGCGATGGTGAGTGCGACCGTCTGCGAT------------------------TA--TTTCCAGGCCGACTGTATCAC-CCCTATTGAGAGGACCGAATAACTGAGATCAAT-CAATAT-ATA-GCCAAATCACTACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAAAACCCCTCCGAGTCTGAGCTTCAGGATATGATTAACGAGGTCGATGCCGACAACAACGGTACCATTGACTTCCCTGGTACGAGTTTCTCTTTCTTCCACCCGAAATGC----CCCATACTC-------GCCATT----CGCCATATATTGA---------CA-GAC-GGCACACAGAGTTCCTGACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_hirayamae_CBS238_65 TTGA-----------AGACCCATGACT-GGATTT---ATACTGATAAATAC-GT-TCTG--C--TTC-AATAGGACAAGGACGGCGATGGTGAGTGCGACCGTCTGCGAT------------------------TA--TTTCCAGGCCGACTGTATCAC-CCCTATTGAGAGGACCGAATAACTGAGATCAAT-CAATAT-ATA-GCCAAATCACTACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAAAACCCCTCCGAGTCTGAGCTTCAGGATATGATTAACGAGGTCGATGCCGACAACAACGGTACCATTGACTTCCCTGGTACGAGTTTCTCTTTCTTCCACCCGAAATGC----CCCATACTC-------GCCATT----CGCCATATATTGA---------CA-GAC-GGCACACAGAGTTCCTGACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_bilaiae_CV0231 TTGG--AA-----AAAAAGCGTCGCCT-GGAATC--AACACTAATGGATGC-TT-TTTC--CCGAGA-AATAGGACAAGGATGGCGATGGTGAGTGCGATCGTACTCGGGC--------------TCGAT----AA-TTTCAAGATCCGATTATGTCCT-CTTGACCGAGTGAA-CAAATCACTGAGATGAAT-AAATTCGATAGGACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCTTCCGAGTCTGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAATAACGGTACCATCGATTTCCCTGGTACGC-TCTCC----CTCCCCTCCGAATGATGATCTCA-------------AGCCCCGAGAAGACTGATATTGA---------CATTGC-GA--CACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAG Penicillium_bilaiae_CV0387 TTGG--AA-----AAAAAGCGTCGCCT-GGAATC--AACACTAATGGATGC-TT-TTTC--CCGAGA-AATAGGACAAGGATGGCGATGGTGAGTGCGATCGTACTCGGGC--------------TCGAT----AA-TTTCAAGATCCGATTATGTCCT-CTTGACCGAGTGAA-CAAATCACTGAGATGAAT-AAATTCGATAGGACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCTTCCGAGTCTGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAATAACGGTACCATCGATTTCCCTGGTACGC-TCTCC----CTCCCCTCCGAATGATGATCTCA-------------AGCCCCGAGAAGACTGATATTGA---------CATTGC-GA--CACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAG Penicillium_sclerotiorum_CV0934 TTGA----------AACCCTCGTGACT-GGATTT--AATGCTGATGGATAT-GT-TCTC--C--GGC-AATAGGACAAGGATGGTGATGGTTAGTGCGACCGTCGGCGA-----------------TTTTTT--AA--ATTCCATGCCGACTGGAGTAT-ACCCACTGAGAGAACCGACTAACTGAGACCGAT-CAATCT-ATAGGACAAATCACCACCAAGGAGCTGGGCACCGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCCGAGCTTCAGGACATGATCAACGAGGTCGACGCCGACAACAACGGCACCATTGACTTCCCTGGTACGA-TTTCC----CCTCCACTCGAATAAC----CCCGTGCTCCGTGCTCGCCTCC----GAACCTATATTAA---------TA-TGC-GG--CGCAGAGTTCCTGACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_bilaiae_CV0988 TTGG--AA-----AAAAAGCGTCGCCT-GGAATC--AACACTAATGGATGC-TT-TTTC--CCGAGA-AATAGGACAAGGATGGCGATGGTGAGTGCGATCGTACTCGGGC--------------TCGAT----AA-TTTCAAGATCCGATTATGTCCT-CTTGACCGAGTGAA-CAAATCACTGAGATGAAT-AAATTCGATAGGACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCTTCCGAGTCTGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAATAACGGTACCATCGATTTCCCTGGTACGC-TCTCC----CTCCCCTCCGAATGATGATCTCA-------------AGCCCCGAGAAGACTGATATTGA---------CATTGC-GA--CACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAG Penicillium_bilaiae_CV1213 TTGG---------AAAAAGCGTCGCCT-GGAATC--AACACTAATGGATGC-TT-TTTC--CCGGGA-AATAGGACAAGGATGGCGATGGTGAGTGCGATCGTACTCGGGA--------------TCGAT----AA-TTTCAAGATCCGATTATGTCCT-CTTGACCGAGTGAA-CAAATCACTGAGATGAAT-AAATTCGATAGGACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCTTCCGAGTCTGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAATAACGGTACCATCGATTTCCCTGGTACGC-TCTCC----CTCCCCTCCGAATGATGATCTCA-------------AGCCCCGAGAAGACTGATATTGA---------CATTGC-GA--CACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAG Penicillium_bilaiae_CV1273 TTGG--AA-----AAAAAGCGTCGCCT-GGAATC--AACACTAATGGATGC-TT-TTTC--CCGAGA-AATAGGACAAGGATGGCGATGGTGAGTGCGATCGTACTCGGGC--------------TCGAT----AA-TTTCAAGATCCGATTATGTCCT-CTTGACCGAGTGAA-CAAATCACTGAGATGAAT-AAATTCGATAGGACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCTTCCGAGTCTGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAATAACGGTACCATCGATTTCCCTGGTACGC-TCTCC----CTCCCCTCCGAATGATGATCTCA-------------AGCCCCGAGAAGACTGATATTGA---------CATTGC-GA--CACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAG Penicillium_bilaiae_CV1429 ATGG-AGA-----AAAAAGCGTCGCCT-GGAATC--AATACTAATGGATAC-TT-TTTC--CCGGGA-AATAGGACAAGGATGGCGATGGTGAGTGCGATCGTACTCGGGC--------------TCGAT----AA-TTTCAAGATCCGATCATGTCCT-CTTGACCGAGTGAA-CAAATCACTGAGATGAAT-AAATTCGATAGGACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCTTCCGAGTCTGAGCTGCAGGACATGATCAACGAGGTCGACGCCGATAACAATGGTACCATCGATTTCCCTGGTACGC-TCTCC----CTCCCCTCCGAATGATGATCTCA-------------AGCCCCGAGAAACCTTATATTGA---------CATTGC-GA--CACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAG Penicillium_compactum_CV0112 TTGAAAA--------AAAATGTTGCCT-AAAACC--AATACTAATGGGTGC-TT-TTCC--C--GGT-AACAGGACAAGGATGGCGATGGTGAGTGCGATCGTCTTCGATA--------------TCGAT----GATTTTTTAAATCTGATTGTGTCCT-CTTTATCGAGTGAA-CAAATAACTGAGACGAAT-GAATTTGATAGGCCAGATCACTACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCTGAGCTGCAGGACATGATTAACGAGGTTGACGCCGATAACAACGGAACCATTGACTTCCCTGGTACGA-ATCTC----CTTCCCCTCGATCGTT----TCA-------------AGCTTC----AGACCCGTATTGA---------CA-TGC-GA--CATAGAGTTCCTTACCATGATGGCGCGTAAGATGAAGGACACCGACTCCGAG Penicillium_compactum_CV0204 TTGAAAA--------AAAATGTTGCCT-AAAACC--AATACTAATGGGTGC-TT-TTCC--C--GGT-AACAGGACAAGGATGGCGATGGTGAGTGCGATCGTCTTCGATA--------------TCGAT----GATTTTTTAAATCTGATTGTGTCCT-CTTTATCGAGTGAA-CAAATAACTGAGACGAAT-GAATTTGATAGGCCAGATCACTACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCTGAGCTGCAGGACATGATTAACGAGGTTGACGCCGATAACAACGGAACCATTGACTTCCCTGGTACGA-ATCTC----CTTCCCCTCGATCGTT----TCA-------------AGCTTC----AGACCCGTATTGA---------CA-TGC-GA--CATAGAGTTCCTTACCATGATGGCGCGTAAGATGAAGGACACCGACTCCGAG Penicillium_compactum_CV0227 TTGAAAA--------AAAATGTTGCCT-AAAACC--AATACTAATGGGTGC-TT-TTCC--C--GGT-AACAGGACAAGGATGGCGATGGTGAGTGCGATCGTCTTCGATA--------------TCGAT----GATTTTTTAAATCTGATTGTGTCCT-CTTTATCGAGTGAA-CAAATAACTGAGACGAAT-GAATTTGATAGGCCAGATCACTACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCTGAGCTGCAGGACATGATTAACGAGGTTGACGCCGATAACAACGGAACCATTGACTTCCCTGGTACGA-ATCTC----CTTCCCCTCGATCGTT----TCA-------------AGCTTC----AGACCCGTATTGA---------CA-TGC-GA--CATAGAGTTCCTTACCATGATGGCGCGTAAGATGAAGGACACCGACTCCGAG Penicillium_compactum_CV1875 TTGAAAA--------AAAATGTTGCCT-AAAACC--AATACTAATGGGTGC-TT-TTCC--C--GGT-AACAGGACAAGGATGGCGATGGTGAGTGCGATCGTCTTCGATA--------------TCGAT----GATTTTTTAAATCTGATTGTGTCCT-CTTTATCGAGTGAA-CAAATAACTGAGACGAAT-GAATTTGATAGGCCAGATCACTACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCTGAGCTGCAGGACATGATTAACGAGGTTGACGCCGATAACAACGGAACCATTGACTTCCCTGGTACGA-ATCTC----CTTCCCCTCGATCGTT----TCA-------------AGCTTC----AGACCCGTATTGA---------CA-TGC-GA--CATAGAGTTCCTTACCATGATGGCGCGTAAGATGAAGGACACCGACTCCGAG Penicillium_compactum_CV0401 TTGAAAAA-------AAAATGTTGCCT-AAAACC--AATACTAATGGGTGC-TT-TTCC--C--GGT-AACAGGACAAGGATGGCGATGGTGAGTGCGATCGTCTTCGATA--------------TCGAT----GA-TTTTTAAATCCGATTGTGTCCT-CTCTATCGAGTGAA-CAAATAACTGAGACGAAT-GAATTTGATAGGCCAGATCACTACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCCGAGCTGCAGGACATGATTAACGAGGTTGACGCCGATAACAACGGAACCATTGACTTCCCTGGTACGA-ATCCC----CTTCCCCTCGATCGTT----TCA-------------AGCTTC----AGACCCGTATTGA---------CA-TGC-GA--CATAGAGTTCCTTACCATGATGGCGCGTAAGATGAAAGACACCGACTCCGAG Penicillium_bilaiae_CBS221_66 TTGG--AA-----AAAAAGCGTCGCCT-GGAATC--AACACTAATGGATGC-TT-TTTC--CCGGGA-AATAGGACAAGGATGGCGATGGTGAGTGCGATCGTACTCGGGC--------------TCGAT----AA-TTTCAAGATCCGATTATGTCCT-CTTGACCGAGTGAA-CAAATCACTGAGATGAAT-AAATTCGATAGGACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCTTCCGAGTCTGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAATAACGGTACCATCGATTTCCCTGGTACGC-TCTCC----CTCCCCTCCGAATGATGATCTCA-------------AGCCCCGAGAAGACTGATATTGA---------CATTGC-GA--CACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAG Penicillium_bilaiae_CV0255 TTGG--AA-----AAAAAGCGTCGCCT-GGAATC--AACACTAATGGATGC-TT-TTTC--CCGGGA-AATAGGACAAGGATGGCGATGGTGAGTGCGATCGTACTCGGGC--------------TCGAT----AA-TTTCAAGATCCGATTATGTCCT-CTTGACCGAGTGAA-CAAATCACTGAGATGAAT-AAATTCGATAGGACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCTTCCGAGTCTGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAATAACGGTACCATCGATTTCCCTGGTACGC-TCTCC----CTCCCCTCCGAATGATGATCTCA-------------AGCCCCGAGAAGACTGATATTGA---------CATTGC-GA--CACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAG Penicillium_bilaiae_CV0335 TTGG--AA-----AAAAAGCGTCGCCT-GGAATC--AACACTAATGGATGC-TT-TTTC--CCGGGA-AATAGGACAAGGATGGCGATGGTGAGTGCGATCGTACTCGGGC--------------TCGAT----AA-TTTCAAGATCCGATTATGTCCT-CTTGACCGAGTGAA-CAAATCACTGAGATGAAT-AAATTCGATAGGACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCTTCCGAGTCTGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAATAACGGTACCATCGATTTCCCTGGTACGC-TCTCC----CTCCCCTCCGAATGATGATCTCA-------------AGCCCCGAGAAGACTGATATTGA---------CATTGC-GA--CACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAG Penicillium_compactum_CV1722 TTGAAAA--------AAAATGTTGCCT-AAAACC--AATACTAATGGGTGC-TT-TTCC--C--GGT-AACAGGACAAGGATGGCGATGGTGAGTGCGATCGTCTTCGATA--------------TCGAT----GATTTTTTAAATCTGATTGTGTCCT-CTTTATCGAGTGAA-CAAATAACTGAGACGAAT-GAATTTGATAGGCCAGATCACTACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCTGAGCTGCAGGACATGATTAACGAGGTTGACGCCGATAACAACGGAACCATTGACTTCCCTGGTACGA-ATCTC----CTTCCCCTCGATCGTT----TCA-------------AGCTTC----AGACCCGTATTGA---------CA-TGC-GA--CATAGAGTTCCTTACCATGATGGCGCGTAAGATGAAGGACACCGACTCCGAG Penicillium_hirayamae_CV887 TTGA-----------AGACCATA-ACT-GGATTT---ATACTGACGGATAC-GT-TCTC--C--GGC-AATAGGACAAGGATGGCGATGGTGAGTGCGACCGTCTGCGAT------------------------AA--TTCCCAGGCCGACTGTATCAC-GCCCATTGAGAGGACGGAATAACTGAGACCAAT-CAATCT-ATAGGTCAAATCACYACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGKCCAGAACCCCTCCGAGTCTGAGCTTSAGGACATGATCAACGAGGTCGATGCCGACAACAACGGTACCATTGACTTCCCTGGWACGAGTTCCCCTTTCTCCCACCCGAAATAC----CCTGTACTC-------GCTCTT----GGACATATATAGA---------CA-GAC-GG--CACAGAGTTCCTTACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_hirayamae_CV916 TTGA-----------AGACCCGT-ACT-GGATTT---ATACTGACGGATAC-GT-TCTC--C--GGC-AATAGGACAAGGATGGCGATGGTGAGTGCGACCGTCTGCGAT------------------------TA--TTCCCAGGCCGACTGTATCAT-GCCCATTGAGAGGACGGAATAACTGAGACCAGT-CAATCT-ATAGGTCAAATCACTACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTCGATGCCGACAACAACGGTACCATTGACTTCCCTGGTACGAGTTCCCCTTTCTCCCACCCGAAATAC----CCTGTACTC-------GCTCTT----GGACATATATTGA---------CA-GAC-GG--CACAGAGTTCCTTACCATGATGGCCCGTAAGATGAAGGACACCGACTCCGAG Penicillium_levitum_NRRL705T TTGA----------CAATCTCCGATCGGGAAAACAGTAGACTGACCAAGGCCGTTTTCCCGCTTGTG-AACAGGACAAGGATGGCGATGGTGCGTGCAGTCTTTCCCGGTAGCTCGGACGCTCTTTCTTAGGAAGCAGTCCTTGGGCCACTGGCACCCG-CGAAGGTTTTAAAACAGAATGACTGAGTTATAT-ATCATCGTTAGGCCAAATCACCACCAAGGAGCTCGGCACCGTCATGCGCTCGCTCGGCCAGAACCCCTCCGAGTCCGAGCTGCAGGATATGATCAACGAGGTCGATGCCGACAACAACGGCACCATCGACTTCCCCGGTATGTATTGAATCGCTTGGCAGTCTG---------CTGTGGCTCTTTTTCTCCCTTT----AGACCAAGACTGATTGCTTTTCTG-TGCGCC--TGCAGAGTTCCTTACCATGATGGCCCGCAAGATGAAGGACACCGACTCAGAG ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 478; END; BEGIN TREES; Title 'Trees from "SclerotioraCMD.tre"'; LINK Taxa = 'Section_Sclerotiora_CMD_Taxa'; TRANSLATE 1 Penicillium_guanacastense_DAOM239912T, 2 Penicillium_guanacastense_DAOM239913, 3 Penicillium_herquei_CBS136_22, 4 Penicillium_herquei_CBS336_48T, 5 Penicillium_mallochii_DAOM239917T, 6 Penicillium_mallochii_DAOM239925, 7 Penicillium_sclerotiorum_NRRL2074T, 8 Penicillium_adametzioides_CBS313_59T, 9 Penicillium_adametzioides_DAOM239916, 10 Penicillium_cainii_DAOM239914T, 11 Penicillium_cainii_DAOM239915, 12 Penicillium_jacksonii_DAOM239937T, 13 Penicillium_jacksonii_DAOM239938, 14 Penicillium_viticola_JCM17636T, 15 Penicillium_viticola_DAOM239933, 16 Penicillium_johnkrugii_DAOM239943T, 17 Penicillium_johnkrugii_DAOM239944, 18 Penicillium_sclerotiorum_CBS128_65, 19 Penicillium_sclerotiorum_CBS258_55, 20 Penicillium_sclerotiorum_CBS118889, 21 Penicillium_multicolor_CBS501_73T, 22 Penicillium_adametzii_AS34470, 23 Penicillium_adametzii_AS35708, 24 Penicillium_angulare_NRRL35630, 25 Penicillium_angulare_NRRL35633, 26 Penicillium_bilaiae_ATCC20851, 27 Penicillium_bilaiae_ATCC22348, 28 Penicillium_bilaiae_DAOM197974, 29 Penicillium_bilaiae_NRRL3391T, 30 Penicillium_brocae_NRRL31472T, 31 Penicillium_brocae_NRRL31462, 32 Penicillium_hirayamae_CBS229_60T, 33 Penicillium_hirayamae_CBS238_65, 34 Penicillium_bilaiae_CV0231, 35 Penicillium_bilaiae_CV0387, 36 Penicillium_sclerotiorum_CV0934, 37 Penicillium_bilaiae_CV0988, 38 Penicillium_bilaiae_CV1213, 39 Penicillium_bilaiae_CV1273, 40 Penicillium_bilaiae_CV1429, 41 Penicillium_compactum_CV0112, 42 Penicillium_compactum_CV0204, 43 Penicillium_compactum_CV0227, 44 Penicillium_compactum_CV1875, 45 Penicillium_compactum_CV0401, 46 Penicillium_bilaiae_CBS221_66, 47 Penicillium_bilaiae_CV0255, 48 Penicillium_bilaiae_CV0335, 49 Penicillium_compactum_CV1722, 50 Penicillium_hirayamae_CV887, 51 Penicillium_hirayamae_CV916, 52 Penicillium_levitum_NRRL705T; TREE PAUP_1 = (1,(2,((((5,6),(16,17)),((7,((18,19),(20,36))),((14,15),((10,11),(12,13))))),(((32,33),(50,51)),((3,4),(((22,23),(((30,31),(45,(49,(44,(43,(41,42)))))),(((8,9),(24,25)),(40,(38,(26,((46,(47,48)),(28,((27,29),(39,(37,(34,35)))))))))))),(21,52)))))))[% ] [% ] [% setBetweenBits = selected ]; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 478; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 478; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1357769619300; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 8070459500093644334; tell It; setSelected 52; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 2759634243137639283; mqVersion 275; checksumv 0 3 2390638650 null getNumChars 478 numChars 478 getNumTaxa 52 numTaxa 52 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 412942.0 sumSquares -1.3835058055281971E19 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 403; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1366 732; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #8070459500093644334 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 893.1357769466954.7228542381625441055; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 963 665; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.ladderize; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;