#NEXUS [written Mon Mar 18 17:45:55 EDT 2013 by Mesquite version 2.74 (build 550) at cesar-herreras-MacBook-Pro.local/10.109.194.193] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=27; TAXLABELS Pseudocosmospora_eutypellae_AR4453 Pseudocosmospora_eutypellae_AR4527 Pseudocosmospora_eutypellae_AR4562 Pseudocosmospora_eutypellae_CH1002 Pseudocosmospora_eutypellae_GJS10248 Pseudocosmospora_eutypellae_GJS9315 Pseudocosmospora_sp_AR4768 Pseudocosmospora_rogersonii_CH1011 Pseudocosmospora_rogersonii_GJS9056 Pseudocosmospora_sp_MAFF241531 Pseudocosmospora_rogersonii_CH1012 Pseudocosmospora_rogersonii_GJS091384 Pseudocosmospora_sp_CH1102 Pseudocosmospora_sp_MF241499 Pseudocosmospora_vilior_AR4771 Pseudocosmospora_sp_GJS96216 Pseudocosmospora_vilior_AR4810 Pseudocosmospora_vilior_PC1246 Pseudocosmospora_eutypae_CH1101 Pseudocosmospora_eutypae_IM73016 Pseudocosmospora_sp_GJS95141 Pseudocosmospora_sp_AR4826 Pseudocosmospora_metajoca_AR4576 Pseudocosmospora_joca_AR4779 Pseudocosmospora_sp_GJS95143 Microcera_larvarum_AR4580 Corallomycetella_repens_AR4547 ; END; BEGIN CHARACTERS; TITLE mcm7; DIMENSIONS NCHAR=561; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Pseudocosmospora_eutypellae_AR4453 tgcgaccgttgtggttgtgaaatcttccagcctatcagcgacaagcagtacggccctctgacgatgtgtccctcgtccgactgcaagtcgaatcagtccaagggtcagctgaacccttcatcccgggcgtccaagttcctacctttccaggaagtcaaggtgcaggagatggcggagcaagttcccatcggtcagattcctcgaagtctgaccgtcatgtgctacggcagtctcgtcagacagatcaaccctggtgatgtcgttgacatctctggcatcttcctaccaactccttataccggcttcaaggctatgaaggccggcctactgactgatacctacgtggaggctcaccacatccttcagcacaagaaggcctacagcgagatgattgtagatccttcgttggtgcgaagaatcgaaaagtaccgccagactggtcaagtctacgagctcctcgccaagtcgattgcccctgagattttcggccatctcgatgtcaagaaagccctcttgttgctccttattggcggtgttaccaaggagatgggcgacggtatg Pseudocosmospora_eutypellae_AR4527 tgcgaccgttgtggttgtgaaatcttccagcctatcagcgacaagcagtacggccctctgacgatgtgtccctcgtccgactgcaagtcgaatcagtccaagggtcagctgaacccttcatcccgggcgtccaagttcctacctttccaggaagtcaaggtgcaggagatggcggagcaagttcccatcggtcagattcctcgaagtctgaccgtcatgtgctacggcagtctcgtcagacagatcaaccctggtgatgtcgttgacatctctggcatcttcctaccaactccttataccggcttcaaggctatgaaggccggcctactgactgatacctacgtggaggctcaccacatccttcagcacaagaaggcctacagcgagatgattgtagatccttcgttggtgcgaagaatcgaaaagtaccgccagactggtcaagtctacgagctcctcgccaagtcgattgcccctgagattttcggccatctcgatgtcaagaaagccctcttgttgctccttattggcggtgttaccaaggagatgggcgacggtatg Pseudocosmospora_eutypellae_AR4562 tgcgaccgttgtggttgtgaaatcttccagcctatcagcgacaagcagtacggccctctgacgatgtgtccctcgtccgactgcaagtcgaatcagtccaagggtcagctgaacccttcatcccgggcgtccaagttcctacctttccaggaagtcaaggtgcaggagatggcggagcaagttcccatcggtcagattcctcgaagtctgaccgtcatgtgctacggcagtctcgtcagacagatcaaccctggtgatgtcgttgacatctctggcatcttcctaccaactccttataccggcttcaaggctatgaaggccggcctactgactgatacctacgtggaggctcaccacatccttcagcacaagaaggcctacagcgagatgattgtagatccttcgttggtgcgaagaatcgaaaagtaccgccagactggtcaagtctacgagctcctcgccaagtcgattgcccctgagattttcggccatctcgatgtcaagaaagccctcttgttgctccttattggcggtgttaccaaggagatgggcgacggtatg Pseudocosmospora_eutypellae_CH1002 tgcgaccgttgtggttgtgaaatcttccagcctatcagcgacaagcagtacggccctctgacgatgtgtccctcgtccgactgcaagtcgaatcagtccaagggtcagctgaacccttcatcccgggcgtccaagttcctacctttccaggaagtcaaggtgcaggagatggcggagcaagttcccatcggtcagattcctcgaagtctgaccgtcatgtgctacggcagtctcgtcagacagatcaaccctggtgatgtcgttgacatctctggcatcttcctaccaactccttataccggcttcaaggctatgaaggccggcctactgactgatacctacgtggaggctcaccacatccttcagcacaagaaggcctacagcgagatgattgtagatccttcgttggtgcgaagaatcgaaaagtaccgccagactggtcaagtctacgagctcctcgccaagtcgattgcccctgagattttcggccatctcgatgtcaagaaagccctcttgttgctccttattggcggtgttaccaaggagatgggcgacggtatg Pseudocosmospora_eutypellae_GJS10248 tgcgaccgttgtggttgtgaaatcttccagcctatcagcgacaagcagtacggccctctgacgatgtgtccctcgtccgactgcaagtcgaatcagtccaagggtcagctgaacccttcatcccgggcgtccaagttcctacctttccaggaagtcaaggtgcaggagatggcggagcaagttcccatcggtcagattcctcgaagtctgaccgtcatgtgctacggcagtctcgtcagacagatcaaccctggtgatgtcgttgacatctctggcatcttcctaccaactccttataccggcttcaaggctatgaaggccggcctactgactgatacctacgtggaggctcaccacatccttcagcacaagaaggcctacagcgagatgattgtagatccttcgttggtgcgaagaatcgaaaagtaccgccagactggtcaagtctacgagctcctcgccaagtcgattgcccctgagattttcggccatctcgatgtcaagaaagccctcttgttgctccttattggcggtgttaccaaggagatgggcgacggtatg Pseudocosmospora_eutypellae_GJS9315 tgcgaccgttgtggttgtgaaatcttccagcctatcagcgacaagcagtacggccctctgacgatgtgtccctcgtccgactgcaagtcgaatcagtccaagggtcagctgaacccttcatcccgggcgtccaagttcctacctttccaggaagtcaaggtgcaggagatggcggagcaagttcccatcggtcagattcctcgaagtctgaccgtcatgtgctacggcagtctcgtcagacagatcaaccctggtgatgtcgttgacatctctggcatcttcctaccaactccttataccggcttcaaggctatgaaggccggcctactgactgatacctacgtggaggctcaccacatccttcagcacaagaaggcctacagcgagatgattgtagatccttcgttggtgcgaagaatcgaaaagtaccgccagactggtcaagtctacgagctcctcgccaagtcgattgcccctgagattttcggccatctcgatgtcaagaaagccctcttgttgctccttattggcggtgttaccaaggagatgggcgacggtatg Pseudocosmospora_sp_AR4768 tgcgatcggtgtggttgcgaaatctttcagcctatcagcgataggcagtacggcccccttacgatgtgtccctcgtccgactgcaagtccaatcagtccaagggtcaactaaacccttcatcccgagcgtccaagttcttgcctttccaggaagtcaaggtgcaagagatggcagagcaagttcctatcggtcagattcctcggagtctcactgtcatgtgctacggcagtcttgttagacagatcaaccctggtgatgtcgttgacatctctggcatcttcttgccaactccttatactggcttcaaggctatgaaggctggtctactgacggatacctacgtggaggctcaccatatcctccaacacaagaaggcttatagcgagatgatcgttgacccttcgttggtgcgaagaatcgaaaagtaccgccagaccggccaagtctacgagcttctcgccaagtcgattgcccctgaaatttttggacatctcgacgtgaagaaggccctgctcctacttctcattggtggtgtcacgaaggagatgggcgacggcatg Pseudocosmospora_rogersonii_CH1011 tgcgaccgatgtggttgtgaaatcttccagcctatcagcgacaagcagtacgggcctctgacgatgtgtccctcgtccgactgcaaatcgaatcagtccaagggtcagctgaacccttcatcccgggcgtccaagttcctacctttccaggaagtcaaggtgcaggagatggcggagcaagtccccatcggtcagattcctcgaagtctgactgtcatgtgctacggtagtctcgtcagacagatcaaccctggtgatgtcgttgacatctctggcatcttcctaccaactccttacaccggcttcaaggctatgaaggccggcctactgactgatacttacgtggaggctcaccacatccttcagcacaagaaggcctacagcgagatgattgtagatccttcgttggtgcgaagaatcgaaaagtaccgccagactggtcaagtctacgagctcctcgccaagtcgattgcccctgagattttcggccacctcgatgtcaagaaagccctcctgttactccttattggcggtgttggtaaggagat------------- Pseudocosmospora_rogersonii_GJS9056 tgcgaccgatgtggttgtgaaatcttccagcctatcagcgacaagcagtacgggcctctgacgatgtgtccctcgtccgactgcaaatcgaatcagtccaagggtcagctgaacccttcatcccgggcgtccaagttcctacctttccaggaagtcaaggtgcaggagatggcggagcaagtccccatcggtcagattcctcgaagtctgactgtcatgtgctacggtagtctcgtcagacagatcaaccctggtgatgtcgttgacatctctggcatcttcctaccaactccttacaccggcttcaaggctatgaaggccggcctactgactgatacttacgtggaggctcaccacatccttcagcacaagaaggcctacagcgagatgattgtagatccttcgttggtgcgaagaatcgaaaagtaccgccagactggtcaagtctacgagctcctcgccaagtcgattgcccctgagattttcggccacctcgatgtcaagaaagccctcctgttactccttattggcggtgttggtaaggagatgggcgacggcatg Pseudocosmospora_sp_MAFF241531 tgcgaccgatgtggttgtgaaatctttcagcctatcagcgacaagcagtacggccctctgacgatgtgtccctcgtccgactgcaaatcgaatcagtccaagggtcagctgaacccttcatcccgggcgtccaagttcctacctttccaggaagtcaaggtgcaggagatggcggagcaagttcccatcggtcagattcctcgaagtctgactgtcatgtgctacggcagtctcgtcaggcagatcaatcctggtgatgtcgttgacatctctggcatcttcctaccaactccttataccggcttcaaggctatgaaagccggcctactgactgatacctacgtggaggcccaccatatccttcagcacaagaaggcctacagcgagatgattgtagatccctcgttggtgcgaagaatcgagaagtaccgccagactggtcaagtctacgagctcctcgccaagtcgattgctcctgaaattttcggccacctcgatgtcaagaaagccctcctgttgctccttattggcggtgttaccaaggag--------------- Pseudocosmospora_rogersonii_CH1012 tgcgaccgatgtggttgtgaaatcttccagcctatcagcgacaagcagtacgggcctctgacgatgtgtccctcgtccgactgcaaatcgaatcagtccaagggtcagctgaacccttcatcccgggcgtccaagttcctacctttccaggaagtcaaggtgcaggagatggcggagcaagtccccatcggtcagattcctcgaagtctgactgtcatgtgctacggcagtctcgtcagacagatcaaccctggtgatgtcgttgacatctctggcatcttcctaccaactccttacaccggcttcaaggctatgaaggccggcctactgactgatacttacgtggaggctcaccacatccttcagcacaagaaggcctacagcgagatgattgtagatccttcgttggtgcgaagaatcgaaaagtaccgccagactggtcaagtctacgagctcctcgccaagtcgattgcccctgagattttcggccacctcgatgtcaagaaagccctcctgttactccttattggcggtgttggtaaggagatgggcgacggcatg Pseudocosmospora_rogersonii_GJS091384 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pseudocosmospora_sp_CH1102 tgcgatcgatgtggttgcgaaatcttccagcccatcagcgataagcagtacggtcccctgacaatgtgtccatcctccgactgcaagtccaaccagtccaagggtcagctgaacccttcatcccgagcgtcgaagttcctgcctttccaagaagtcaaggtgcaggagatggcagagcaagttcccatcggccagatcccgcgaagtcttactgtcatgtgctacggtagtcttgtgagacagatcaaccctggtgatgttgttgacatttctggcatcttcctaccaactccttataccggtttcaaggctatgaaagctggcctcctaactgatacctacgtcgaagctcatcacatccttcagcacaagaaggcctacagtgagatgatcgtcgacccttcattggtgcgaagaatcgaaaagtaccgccagactggccaagtttacgagcttcttgccaagtcgattgcccctgaaattttcgggcatcttgatgtgaagaaggctcttcttctactcctcattggcggtgtcacaaaggagatgggtgacggtatg Pseudocosmospora_sp_MF241499 tgcgaccgttgtggttgtgaaatcttccagcctatcagcgacaagcagtacggccctctgacgatgtgtccctcgtccgactgcaaatcgaatcagtccaagggtcagctgaacccttcatccagggcgtcgaaattcctacctttccaggaagtcaaagtgcaggagatggcggagcaagtccccatcggtcagattcctcgaagtctgactgtcatgtgctacggcagtctcgtcagacagatcaaccctggtgatgtcgttgacatctctggcatcttcctaccaactccttataccggcttcaaggctatgaaggccggcctactgaccgatacctacgtggaggctcaccacatacttcagcacaagaaggcctacagcgagatgattgtagatccttcgttggtgcgaagaatcgaaaagtaccgccagactggtcaagtctacgagcttctcgccaagtcgattgcccctgagattttcggccacctcgatgtcaaaaaagccctcctgttgctccttattggcggtgttaccaaggagatgggcgacggcatg Pseudocosmospora_vilior_AR4771 tgtgacagatgcggctgcgaaatcttccagcctattagcgataagcaatacggccccctgactatgtgtccctcgtccgattgcaaatccaaccagtccaagggccagttgaatccttcctctcgagcgtccaagttcctccctttccaggaagtcaaggtacaggaaatggcggaacaggtcccaatcggccagattcctcggagtctcaccgtcatgtgccatggcagccttgtcagacagatcaaccctggcgatgtgatcgacatctcaggcatcttcctgcctacaccctatactgggttcaaggctatgaaggctggcctgttaactgacacctatgttgaggcccaccatattcttcagcacaagaaggcttacagcgagatgattgttgatccctcgctggtgcgaagaatcgacaagtatcgtcagaccggacaggtttacgaacttctcgccaagtcgatcgcccctgagatttttgggcatctggacgtcaagaagtcgctccttctactccttatcggcggtgtcaccaaggaaatgggcgatggcatg Pseudocosmospora_sp_GJS96216 tgtgacagatgcggttgcgaaatcttccagcctatcagcgacaagcaatacggtcccctgactatgtgtccctcgtccgattgcaagtccaatcagtccaagggtcaactgaacccctcctctcgagcatccaagttcctcccctttcaggaagtcaaggtgcaggagatggcggagcaagttcccatcggccagatccctcgaagtctgaccgtcatgtgctacggcagcctcgtcagacagattaatcctggtgatgtggtagacatctctggcatcttcctacctactccctatactgggttcaaggccatgaaggccggactactgactgacacctatgtggaggcccatcacatccttcagcacaagaaggcttacagtgagatgatagttgatccctcgttggtgcgaagaatcgaaaagtaccgtcagactggacaagtctacgagcttctcgccaagtcgatcgcccctgagatttacgggcatctcgacgtcaagaagtcactgcttttgctgctcattggcggtgtgacgaaggaaatgggcgatggcatg Pseudocosmospora_vilior_AR4810 tgtgatagatgcggctgtgaaatctttcagcccattagcgataagcaatacggtcccctgactatgtgtccgtcgtccgattgcaaatccaaccagtccaagggccagttgaacccttcctctcgagcgtccaagttcctccctttccaggaagtcaaggtccaagaaatggcggaacaggttccaatcggccagatccctcgaagtctcaccgtcatgtgccacggcagccttgtcaggcagatcaaccctggcgatgtggtcgacatctcgggcatctttctgcctaccccttatacggggtttaaggctatgaaggctggcctattgactgacacctatgttgaggcccatcacatccttcagcataagaaggcttacagcgagatgattgttgatccctcgttggtgcgaagaatcgacaagtatcgccagaccggacaagtttacgagctcctcgccaagtcaatcgcccctgagatttttgggcatcttgacgtcaagaagtcacttcttctactccttatcggcggtgtcaccaaggaaatgggcgatggcatg Pseudocosmospora_vilior_PC1246 tgcgacagatgcggctgcgaaatcttccagcctattagcgataagcaatacggccccctgactatgtgtccctcatccgattgcaaatccaaccagtccaagggccagttgaatccttcctctcgagcgtccaagttcctccctttccaggaagtcaaggtccaggaaatggcggaacaggtcccaatcggccagattcctcggagtctcaccgtcatgtgccacggaagccttgtcagacagatcaaccctggcgatgtggtcgacatctcgggcatcttcctgcctaccccctatactgggttcaaggctatgaaggctggcctattaactgacacctatgttgaagcccaccatattcttcagcacaagaaggcttacagcgagatgattgtcgatccctcgctggtgcgaagaatcgacaagtatcgtcagaccggacaggtttacgagcttctcgccaagtccatcgcccctgagatttttgggcatctggacgtcaagaagtcgctccttctactccttatcggcggtgtcaccaaggaaatgggcgatggcatg Pseudocosmospora_eutypae_CH1101 tgcgacagatgtggttgcgaaatcttccaacccatcagcgataggcagtacggtcccttgacgatgtgtccctcgtccgactgcaagtccaaccagtccaagggtcaactgaatccgtcttcccgagcttccaagttcctgcccttccaggaagtcaaggttcaggagatggcagagcaagttcccatcggccagatccctcgaagcctcactgtcatgtgctacggcagtcttgtcaggcagatcaaccctggagatgtggttgacatttctggcatcttcctgccgactccctatactggcttcaaggctatgaaggccgggctactgactgatacctacgtggaggctcaccatatccttcagcataagaaggcctacagtgagatgatcgttgacccttcgctggtgcgaagaatcgacaagtatcgccagaccggacaagtctacgaacttctcgccaagtcgatcgcccccgagattttcggccatcttgatgttaagaaggccctccttctgctcctcattggtggtgtcaacaaggaaatgggcgacggcatg Pseudocosmospora_eutypae_IM73016 tgcgacagatgtggttgcgaaatcttccaacccatcagcgataggcagtacggtcccttgacgatgtgtccctcgtccgactgcaagtccaaccagtccaagggtcaactgaatccgtcttcccgagcttccaagttcctgcccttccaggaagtcaaggttcaggagatggcagagcaagttcccatcggccagatccctcgaagcctcactgtcatgtgctacggcagtcttgtcaggcagatcaaccctggagatgtggttgacatttctggcatcttcctgccgactccctatactggcttcaaggctatgaaggccgggctactgactgatacctacgtggaggctcaccatatccttcagcataagaaggcctacagtgagatgatcgttgacccttcgctggtgcgaagaatcgacaagtatcgccagaccggacaagtctacgaacttctcgccaagtcgatcgcccccgagattttcggccatcttgatgttaagaaggccctccttctgctcctcattggtggtgtcaacaaggaaatgggcgacggcatg Pseudocosmospora_sp_GJS95141 tgcgatcggtgtggctgcgaaatctttcagcccatcagcgataagcagtacggtcccctaaccatgtgtccctcgtccgactgcaagtccaaccagtccaagggtcagctgaatccttcgtcccgagcgtccaaattcctgccttttcaggaagtcaaggtccaggagatggcagagcaagttcccatcggtcagatccctcgaagtcttactgtcatgtgctacggcagtcttgtaagacaaatcaaccctggtgatgtcgttgacatctctggcatcttcctacccactccttataccggcttcaaggctatgaaggccggcttattgactgatacctacgtggaggctcatcatatccttcagcacaaaaaggcttacagcgagatgattgtcgacccttccttggtgcgaaggattgagaagtaccgccagactggccaagtttacgaacttctcgccaagtcgatcgcccctgaaatctttggacatcttgatgtgaagaaggccctccttctactcctcattggtggtgtcacaaaggagatgggtgacggtatg Pseudocosmospora_sp_AR4826 tgtgacagatgtggctgcgaaatcttccagcctattagcgacaagcaatacggtcccctgactatgtgtccctcgtccgattgcaagtccaatcagtccaagggtcaactgaacccctcctctcgagcatccaagttcctccccttccaggaagtcaaggtgcaggaaatggcagagcaagtcccgatcggccagatccctcgaagtctgaccgtcatgtgctatggcagcctcgtcagacagatcaatcctggtgatgtggtagacatctctggcatcttcctgcctactccctatactggcttcaaggccatgaaggccggactgctgactgacacctacgtggaagctcatcacatccttcaacacaagaaggcttacagtgagatgatagttgatccctcgttggtgcgaagaatcgaaaagtaccgtcagactggacaagtctacgagcttctcgccaagtcgattgcccctgaaatctacgggcatctcgacgtcaagaagtctctgcttttgctgctcattggcggtgttacgaaggagatgggcgatggcatg Pseudocosmospora_metajoca_AR4576 tgcgacagatgcggttgcgaaattttccaacccattagcgacaagcagtacggtcctttgacgatgtgcccctcgtccgactgtaaggccaaccagtccaagggccagctgaacccttcttctcgagcttccaaattcttgcctttccaagaagtcaaagttcaggagatggcagaacaagttcccattggtcaaattcctcgaagtctcactgtcatgtgctacgggagtcttgtcagacagatcaaccctggcgatgtcgttgacatctccggtatcttcctgcctactccctatactggtttcaaggcgatgaaggctggacttctgaccgatacttatgtggaggctcaccatatccttcagcataagaaagcgtatagcgagatgattttcgacccttcgttggtgcgaagaatcgagaagtatcgtcaaactggacaggtgtacgagcttctcgccaagtcaatcgctcccgaaattttcggacatctcgatgtcaagaaagccctgctgttgctcctcatcggtggtgtcaacaaggagatgggcgatggcatg Pseudocosmospora_joca_AR4779 tgcgacagatgcggttgcgaaatcttccagcccattagcgacaggcagtatggccccttgtcaatgtgcccctcgtccgactgcaaggccaaccagtccaagggccagttgaacccttcttctcgggcctccaaattcttgcctttccaagaggtcaaggttcaggagatggcagaacaagttcccatcggccaaattcctcgaagtctcactgtcatgtgctacgggagcctcgtcagacaaatcaaccctggtgatgtcgttgacatctccggtatcttcctgcctactccctatactggtttcaaagcgatgaaggctggactcctgactgatacttatgtggaggctcaccatatccttcagcataagaaggcttacagtgagatgattgtcgacccttcattggtgcgaagaatcgagaaatatcgccaaactggacaagtgtacgagcttctcgccaagtcaatcgctcccgagattttcggacttctcgatgttaagaaatccctgcttctactcctgattggtggtgtcaacaaggagatgggcgatggcatg Pseudocosmospora_sp_GJS95143 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Microcera_larvarum_AR4580 tgcgatcgatgcggttgcgaaattttccagcctatcaacgagaagcagtacggtcccttaacgatgtgtccatcttcagactgcaagaacaatcagtccagaggccaattgaatccttcctctcgagcgtcgaaattcctaccattccaggaggttaaggttcaggagatggcagagcaagtgcccatcggccagattccacgaagtcttactgttatgtgctacggtacactcgtccggaagatcaaccccggtgatgtggtggatatctctggaattttcctgcctactccatataccggcttcaaggctatgaaggctggcctgctcaccgacacctatctcgaggctcaccacatcctccaacacaaaaaggcctacagtgaaatgattgtggatcctatgctggtgcgaagaatcgaaaagtaccgtcaaagtggccaggtgtacgagctccttgcaaagtcgatcgctcctgagattttcggacatctcgacgtaaagaaggctcttcttctgctccttatcggtggtgtcaataaagagatgggtgacggcatg Corallomycetella_repens_AR4547 tgcgataggtgtggttgcgaaatcttccagcccgtgagcgagagacagtacggccccctgacgatgtgcccctccaccgattgcaaggagaaccaatccaggggacaactgaacccctcgtcgagggcctccaagtttctgcctttccaggaggtcaaggtgcaggagatggcagagcaagttcccatcggccagattcctcgcagtctcaccgtcatgtgctatggcaccctggtcagaaaagtgaaccctggcgacgtcattgatatctctggcatcttcctccccaccccatacaccgggtttaaggccatgagggcaggcctgctgaccgatacctaccttgaggctcaccatattcttcagcacaagaaggcctacagcgagatgatcgtggatccggcgttggttcgacgaatcgagaaatatcgccagacaggtcaggtctatgagcttcttgccaagtccatcgcccctgagatctacggccacctggatgtcaagaaggctctcctcctgctcctcattggcggagtaaacaaggagatgggtgacggcatg ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 561; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 561; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 561; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1363643155689; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 3552632723958451767; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 6939877087427334187; mqVersion 274; checksumv 0 2 3418731075 null getNumChars 561 numChars 561 getNumTaxa 27 numTaxa 27 short true bits 1152921504606846991 states 15 sumSquaresStatesOnly 288767.0 sumSquares -6.795319348152756E21 NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 464; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #6939877087427334187 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 600 397; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;