#NEXUS [written Tue Apr 09 12:24:41 EDT 2013 by Mesquite version 2.75 (build 566) at dhcp-128-146-138-144.osuwireless.ohio-state.edu/128.146.138.144] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=28; TAXLABELS Aliatypus_coylei_MY1642 Aliatypus_starretti_MY480_Loc4 Aliatypus_starretti_MY485_Loc1 Aliatypus_starretti_MY1736_Loc3 Aliatypus_starretti_MY1728_Loc2 Aliatypus_roxxiae_MY472_Loc26 Aliatypus_roxxiae_MY1740_Loc27 Aliatypus_roxxiae_MY1742_Loc30 Aliatypus_roxxiae_MY4039_Loc29 Aliatypus_roxxiae_MY4332_Loc25 Aliatypus_thompsoni_MY1524_Loc20 Aliatypus_thompsoni_MY1718_Loc21 Aliatypus_thompsoni_MY1526_Loc17 Aliatypus_thompsoni_MY4062_Loc10 Aliatypus_thompsoni_MY1720_Loc16 Aliatypus_thompsoni_MY1723_Loc14 Aliatypus_thompsoni_MY4071_Loc19 Aliatypus_thompsoni_MY1739_Loc22 Aliatypus_thompsoni_MY4075_Loc23 Aliatypus_thompsoni_MY471_Loc78 Aliatypus_thompsoni_MY1452_Loc75 Aliatypus_thompsoni_MY1454_Loc74 Aliatypus_thompsoni_MY1483_Loc59 Aliatypus_thompsoni_MY1497_Loc51 Aliatypus_thompsoni_MY1507_Loc44 Aliatypus_thompsoni_MY4118_Loc36 Aliatypus_thompsoni_MY4314_Loc39 Aliatypus_thompsoni_MY4319_Loc37 ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=739; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Aliatypus_coylei_MY1642 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGACGGTACGACGCRAATAAGAATCGGCAGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAACAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTCTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGTGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGACATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCRTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATCTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTTCACACTATTTTGCATGAACTTGCA Aliatypus_starretti_MY480_Loc4 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGTGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_starretti_MY485_Loc1 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATCggtGGTGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_starretti_MY1736_Loc3 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGTGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_starretti_MY1728_Loc2 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATCggtGGTGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_roxxiae_MY472_Loc26 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCCACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGTGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGACATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGACAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_roxxiae_MY1740_Loc27 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCCACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGTGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGACATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGACAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_roxxiae_MY1742_Loc30 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCCACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGTGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGACATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGACAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACAATTTTGCATGAACTTGCA Aliatypus_roxxiae_MY4039_Loc29 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCCACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGTGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGACATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGACAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACAATTTTGCATGAACTTGCA Aliatypus_roxxiae_MY4332_Loc25 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCCACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTTCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGTGGCCCGCCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGACAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY1524_Loc20 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY1718_Loc21 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY1526_Loc17 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY4062_Loc10 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY1720_Loc16 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY1723_Loc14 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCAGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY4071_Loc19 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY1739_Loc22 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY4075_Loc23 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY471_Loc78 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATCTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY1452_Loc75 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATCTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY1454_Loc74 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATCTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY1483_Loc59 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATCTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY1497_Loc51 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAACGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY1507_Loc44 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAACGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCGTCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATCTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY4118_Loc36 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCTGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY4314_Loc39 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA Aliatypus_thompsoni_MY4319_Loc37 GGAACGCCCAAGGCGATTGTCTTACGCTGGGTTTGTGAAGCCACCTCAACAAAAATCAAGAAGAGTGTCAGACGCTGGTCAGAGTGGAATTAACTCTCACGGCGTGTTGAGTGGTAGTGTCTCCGAAGTTGATTCCAACGCCCCTACTATATTGCACTTCATTGAAACTATGAATTCAGGTCGGTACGACGCGAATAAGAATCGGCCGAGTCGCCGTACTAGCCGGGCAACTGATGACGGCTTTACCTGTTCTCAGCAATCCATTCTAAGTGCTATGAACAGATTTGTACAATCTGTCAACAATATGGATTCCACAGTTCTGGTGCCTTCACGCTTGCAAGACATAGACGTCCACAACGAGAATAGTAAGTTCAGCCGATACCTTCCACCTGGCCTTAATAATTGTGATGTTTATGGTTTCTACAGTATGCTGAGAGATGTTAGAAATGAACTGTTGTGGGGCCCTTCTATC---GGCGGCCCACCTTCATCTTCCTGTCTCCCTGGCAGTGGCAGGTCATCACCAAGAGCTTCAACCATCACAAAACATGTACGACAGCCGTCAGATGATAGCCTTGGTAGTACAGGGTTTCCATCTGATCAGGAAACTGACAGTGATATTGAAAGTGTTCTGACTGATAGAGATAGCATTGATGATCAACCAGCCCCTGGCTCTCATTTAGCCACAGCCTTTAGACACCATTTGCAAGGTCTCCACACTATTTTGCATGAACTTGCA ; END; BEGIN TREES; Title 'Trees from "Mid1_clock.tre"'; LINK Taxa = Taxa; TRANSLATE 1 Aliatypus_coylei_MY1642, 2 Aliatypus_starretti_MY480_Loc4, 3 Aliatypus_starretti_MY485_Loc1, 4 Aliatypus_starretti_MY1736_Loc3, 5 Aliatypus_starretti_MY1728_Loc2, 6 Aliatypus_roxxiae_MY472_Loc26, 7 Aliatypus_roxxiae_MY1740_Loc27, 8 Aliatypus_roxxiae_MY1742_Loc30, 9 Aliatypus_roxxiae_MY4039_Loc29, 10 Aliatypus_roxxiae_MY4332_Loc25, 11 Aliatypus_thompsoni_MY1524_Loc20, 12 Aliatypus_thompsoni_MY1718_Loc21, 13 Aliatypus_thompsoni_MY1526_Loc17, 14 Aliatypus_thompsoni_MY4062_Loc10, 15 Aliatypus_thompsoni_MY1720_Loc16, 16 Aliatypus_thompsoni_MY1723_Loc14, 17 Aliatypus_thompsoni_MY4071_Loc19, 18 Aliatypus_thompsoni_MY1739_Loc22, 19 Aliatypus_thompsoni_MY4075_Loc23, 20 Aliatypus_thompsoni_MY471_Loc78, 21 Aliatypus_thompsoni_MY1452_Loc75, 22 Aliatypus_thompsoni_MY1454_Loc74, 23 Aliatypus_thompsoni_MY1483_Loc59, 24 Aliatypus_thompsoni_MY1497_Loc51, 25 Aliatypus_thompsoni_MY1507_Loc44, 26 Aliatypus_thompsoni_MY4118_Loc36, 27 Aliatypus_thompsoni_MY4314_Loc39, 28 Aliatypus_thompsoni_MY4319_Loc37; TREE PAUP_1 = (1:0.0070214,(((((2:0.0013185,((3:0.0,5:0.0):0.0013185,(((6:0.0,7:0.0):3.827E-4,(8:0.0,9:0.0):3.827E-4):4.55E-4,10:8.376E-4):4.808E-4):0.0):0.0,4:0.0013185):5.165E-4,((((20:0.0,23:0.0):0.0,22:0.0):0.0,21:0.0):9.707E-4,25:9.707E-4):8.643E-4):0.0,((((11:0.0,(12:0.0,(27:0.0,28:0.0):0.0):0.0):0.0,(14:0.0,15:0.0):0.0):0.0,(13:0.0,((17:0.0,19:0.0):0.0,18:0.0):0.0):0.0):0.0011769,(24:0.0011769,26:0.0011769):0.0):6.581E-4):6.245E-4,16:0.0024595):0.0045619):0.0; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 739; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 739; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 739; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1365524681818; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 4572993225737312358; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 4250509546354074339; mqVersion 275; checksumv 0 3 3216324948 null getNumChars 739 numChars 739 getNumTaxa 28 numTaxa 28 short true bits 3458764513820540943 states 15 sumSquaresStatesOnly 450730.0 sumSquares -2.7670116110564213E19 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 284; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1345 739; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #4572993225737312358 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #4572993225737312358; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; getTable; tell It; rowNamesWidth 330; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1061 672; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; setActive; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #4572993225737312358 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 1719.1365114715770.7862604387615955287; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1061 672; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.ladderize; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '(1:0.0070214,(16:0.0024595,(((24:0.0011769,26:0.0011769):0.0,((13:0.0,(18:0.0,(17:0.0,19:0.0):0.0):0.0):0.0,((14:0.0,15:0.0):0.0,(11:0.0,(12:0.0,(27:0.0,28:0.0):0.0):0.0):0.0):0.0):0.0011769):6.581E-4,((25:9.707E-4,(21:0.0,(22:0.0,(20:0.0,23:0.0):0.0):0.0):9.707E-4):8.643E-4,(4:0.0013185,(2:0.0013185,((3:0.0,5:0.0):0.0013185,(10:8.376E-4,((6:0.0,7:0.0):3.827E-4,(8:0.0,9:0.0):3.827E-4):4.55E-4):4.808E-4):0.0):0.0):5.165E-4):0.0):6.245E-4):0.0045619):0.0;'; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #4250509546354074339 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1061 672; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.chromaseq.ColorQuality.ColorQuality; tell It; toggleAmbiguities on; toggleMarks on; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; getEmployee #mesquite.chromaseq.SourceFileInfoEditor.SourceFileInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;