#NEXUS [written Tue Apr 09 12:23:00 EDT 2013 by Mesquite version 2.75 (build 566) at dhcp-128-146-138-144.osuwireless.ohio-state.edu/128.146.138.144] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=22; TAXLABELS Aliatypus_coylei_MY1642 Aliatypus_starretti_MY485_Loc1 Aliatypus_roxxiae_MY472_Loc26 Aliatypus_roxxiae_MY1740_Loc27 Aliatypus_roxxiae_MY1742_Loc30 Aliatypus_roxxiae_MY4039_Loc29 Aliatypus_roxxiae_MY4332_Loc25 Aliatypus_thompsoni_MY1524_Loc20 Aliatypus_thompsoni_MY1526_Loc17 Aliatypus_thompsoni_MY4062_Loc10 Aliatypus_thompsoni_MY1723_Loc14 Aliatypus_thompsoni_MY4072_Loc19 Aliatypus_thompsoni_MY1739_Loc22 Aliatypus_thompsoni_MY471_Loc78 Aliatypus_thompsoni_MY1452_Loc75 Aliatypus_thompsoni_MY1454_Loc74 Aliatypus_thompsoni_MY1483_Loc59 Aliatypus_thompsoni_MY1497_Loc51 Aliatypus_thompsoni_MY1507_Loc44 Aliatypus_thompsoni_MY4118_Loc36 Aliatypus_thompsoni_MY4314_Loc39 Aliatypus_thompsoni_MY4319_Loc37 ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=1023; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Aliatypus_coylei_MY1642 GGTTCACGAAGTTCAGCAGCCATCGAAGGTCTGCATGATCAGGTCTTAGCAAGAACTTTGTTCTTATAATTAATGTTGGAAGTGTTCTATGGCATAGGCGGTCGCAAGGAATTCATGGCGGGTGACATAACATTTTTGTTCTGGCTTGAACAGGGTCTTGTTAAAGTACGCGATTACGTTCTCTTGACCATTATATATTTGGGACAATACTGCTCCAATACCGCAATTACTGACGTCGGTGTCAAGGATAAATGGCGCATCTGGAATTCGGTATGCAAGTATGGGCGTACACAGCAGCAAATATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAGTCTTTTGACTCTTCAATTGGATTCAAGCGATGAAAATGTTGGGATGGTGGAAAATCCTTGGACGAAGTGTCGGTGATCGATACAGAGTCCCAGAAAGCTGTGCAGTAGATAGACGTTGGTCAGTCGTGGCCGTGCTCTAACAACCTCAATCTTGTTTGGGCGCCATCTACAGACATCACGCTGCCCAAGTATTTCACATGTCGCTGAAACAACTTGCATTTGGCGGGGCTTAACTTTCGTATGGAAGCAGTTAAT---------ACTTCCCTGATTTTGCTGATGTGATGGTCAAAATCCATTCGTCCTTGCCAATGATGATGATGTCATCCAAATAGACGACGCAGGCTTCTAAAGCAAATTTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCACACCCACAAAAGACATAGCTTCAAACTGTTACAGTCTTTGACTTGTAGAAAACGCGGTCATTCCTCTGTTGTCAGGG------TGAATCTCAACGTGCCAGAAGCCGCTCTTGTGATCAAAATTGGAGAACTCCTCGGACCCTGACAAGCAGTACAGAATATTATCGATCCTGTGCAATGGAAATCTGTCAACCTTCGTAAGGTCCTT----------------CGTAAGAAA-TTTTAGCATATGGTAGTCCATACAG Aliatypus_starretti_MY485_Loc1 GGTTCACAAAGTTGAGCAGC------------------------CTTAGCAAGAACTTTGTTCTGATAATTGATGGTGGAAGTGTTCTATGGCATAGGCGKTCGCAAGGAATTCATGACGGGTGACGTAACATTTTTGTTCTGGCTTGAACAGGATCTTGTTAAAATACGCGATTACATTCTCTTGATTATTATATATTTGGGACAATACTGCTCTAATACCGCAATTACTGGCGTCGGTGTCAAGGATAAATGGCGCATCTGGAATTTGGTATGCAAGTATGGGCGTAGACAGCAGCAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGACTCTTCAATTGGACTCGAGCGATGGAAATGTTGGGATGGTGGAAAATCCTTGGACGAAGTGTCGGTAATTGATGCAGAGTCCCAGAAAGCTGTGCAGTTGATAGACGTTGGTCAGTCGTGGCCATGCTCTAACAACCTCAATCTTGTTTGGTCGCCATCTACAGAAATCACGCGGCCCAAGTATTTCGCATGTCGCTGAAACAACTTGCATTTGGTGGAGCTTAACTTTCGTCTGGAAGCAGCTAATCGAAAGAAGACTTCCCTGATTTTGCTGATGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGTCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCACAACCACAAAAGACATAGCTTCAAACTGTTACAGTTCTTGACTGATAGGAAACGCGGTCCTTCCTCTGTTATCAGGG------TGAATCTCAACTTGCCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTGTCCTGTGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCACTCCACACAGAAACTTTTAGCTTATGGTAGTCCATGCAG Aliatypus_roxxiae_MY472_Loc26 GGTTCACAAAGTTGAGCAGC------------------------CTTAGCAAGAACTTTGTTCTTATAATTGATGTTGGAAGTGTTCTATGGCATAGGCGGTAGCAAGGAATTCATGACGGGTGACGTAACATTTTTGTTCTGGCTTGAACAGGGTCTTGTTAAAGTACGCGATTGCATTCTCTTGATTATTATATATTTGGGACAATACTGCTCCAATACCGCAATTACTGGCGTCGGTGTCAAGGATAAATGGCGCATCTGGAATTTGGTATGCAACTATGGGCGTAGACAGCAGCAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGACTCTTCAATTGGACTCGAGCGATGGAAATGTTGGGAGGGTGGAAAATCCTTGGACGAAGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGTGCAGTTGATAGACGTTGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCTGCCCAAGTATTTCGCATGTCGCTGAAACAACTTGCATTTGGTGGAGCTTAACTTTCGTCTGGAAGCAGCTAATCGCAAGAAGACTTCCCTGATTTTGCTGATGTGATGATC-AAATCCATTAGTCCTTGCCAATAATGATGCTGCCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCACAACCACAAAAGACCTAGCTTCAAACTGTTACAGTTCTTGACTGGTAGGAAACGCGCTCCTTCCTCTGTTATCAGGGTGAATCTGAATCTCAACTTGCCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTAATAAGGAGTCCAGAATAGTATCTACCCTGTGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAA-TTTTAGCTTATGGTAGTCCATGCAG Aliatypus_roxxiae_MY1740_Loc27 GCCTCACAAAGTTGAGCAAC------------------------CTTAGCAAGAACTTTGTTCTTATAATTGATGTTGGAAGTGTTCTATGGCATAGGCGGTAGCAAGGAATTTATGACGGGTGACGTAACATTTTTGTTCTGGCTTGAACAGGGTCTTGTTAAAGTACGCGATTGCATTCTCTTGATTATTATATATTTGGGACAATACTGCTCCAATACCGCAATTACTGGCGTCGGTGTCAAGAATAAATGGCGCATCTGGAATTTGGTATGCAAGTATGGGCGTAGACAGCAGCAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGACTTTTCAATTGGACTCGAGCGATGGATAGGTTGGGATTTTGGAAAATCCTTGGACGAAGTGTCGGTAATTCATACAGGGTCCCAGAAAGCTGTGCAGTTGATAGACGTCGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCTGCCCAAGTATTTCGCATATCGCTGAAACAACTTGCATTTGGTGCAGCTTAACTTTTGTCTGGAAGCAGCTAATCGCAAGAAGACTTCACTGATTTTGCTGAGGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGCCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCACAACCACAAAAGACATAACTTCAAACTGTTACAGTTGTTGACTGGTAGGAAACGCGCTCCTTCCTCTGTTATCAGGGTGAATCTGAATCTCAACTTGCCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTACCCTGTGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAA-TTTTAGCTTATGGTAGTCCATGCAG Aliatypus_roxxiae_MY1742_Loc30 GGTTCACAAAGTTGAGCAAC------------------------CTTAGCAAGAACTTTGTTCTTATAATTGATGTTGGAAGTGTTCTATGGCATAGGCGGTAGCAAGGAATTTATGACGGGTGACGTAACATTTTTGTTCTGGCTTGAACAGGGTCTTGTTAAAGTACGCGATTGCATTCTCTTGATTATTATATATTTGGGACAATACTGCTCCAATACCGCAATTACTGGCGTCGGTGTCAAGAATAAATGGCGCATCTGGAATTTGGTATGCAAGTATGGGCGTAGACAGCAGCAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGACTTTTCAATTGGACTCGAGCGATGGATAGGTTGGGATTTTGGAAAATCCTTGGACGAAGTGTCGGTAATTCATACAGGGTCCCAGAAAGCTGTGCAGTTGATAGACGTCGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCTGCCCAAGTATTTCGCATATCGCTGAAACAACTTGCATTTGGTGCAGCTTAACTTTTGTCTGGAAGCAGCTAATCGCAAGAAGACTTCACTGATTTTGCTGAGGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGCCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCACAACCACAAAAGACATAACTTCAAACTGTTACAGTTGTTGACTGGTAGGAAACGCGCTCCTTCCTCTGTTATCAGGGTGAATCTGAATCTCAACTTGCCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTACCCTGTGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAA-TTTTAGCTTATGGTAGTCCATGCAG Aliatypus_roxxiae_MY4039_Loc29 GGTTCACAAAGTTGAGCAAC------------------------CTTAGCAAGAACTTTGTTCTTATAATTGATGTTGGAAGTGTTCTATGGCATAGGCGGTAGCAAGGAATTTATGACGGGTGACGTAACATTTTTGTTCTGGCTTGAACAGGGTCTTGTTAAAGTACGCGATTGCATTCTCTTGATTATTATATATTTGGGACAATACTGCTCCAATACCGCAATTACTGGCGTCGGTGTCAAGAATAAATGGCGCATCTGGAATTTGGTATGCAAGTATGGGCGTAGACAGCAGCAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGACTTTTCAATTGGACTCGAGCGATGGATAGGTTGGGATTTTGGAAAATCCTTGGACGAAGTGTCGGTAATTCATACAGGGTCCCAGAAAGCTGTGCAGTTGATAGACGTCGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCTGCCCAAGTATTTCGCATATCGCTGAAACAACTTGCATTTGGTGCAGCTTAACTTTTGTCTGGAAGCAGCTAATCGCAAGAAGACTTCACTGATTTTGCTGAGGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGCCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCACAACCACAAAAGACATAACTTCAAACTGTTACAGTTGTTGACTGGTAGGAAACGCGCTCCTTCCTCTGTTATCAGGGTGAATCTGAATCTCAACTTGCCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTACCCTGTGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAA-TTTTAGCTTATGGTAGTCCATGCAG Aliatypus_roxxiae_MY4332_Loc25 GGTTCACAAAGTTGAGCAGC------------------------CTTAGCAAGAACTTTGTTCTTATAATTGATGTTGGAAGTGTTCTATGGCATAGGCGGTAGCAAGGAATTCATGACGGGTGACGTAACATTTTTGTTCTGGCTTGAACAGGGTCTTGTTAAAGTACGCGATTGCATTCTCTTGATTATTATATATTTGGGACAATACTGCTCCAATACCGCAATTACTGGCGTCGGTGTCAAGGATAAATGGCGCATCTGGAATTTGGTAGGCAAGTATGGGCGAAGACAGCAGCAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGACTCTTCAATTGGACTCGAGCGATGGAAATGTTGGGAGGGTGGAAAATCCTTGGACGAAGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGTGCAGTTGATAGACGTTGGTCAGTCGTCGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCTGCCCAAGTATTTCGCATGTCGCTGAAACAACTTGCATTTGGTGGAGCTTAACTTTCGTCTGGAAGCAGCTAATCGCAAGAAGACTTCCCTGATTTTGCTGATGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGCCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCACAACCACAAAAGACCTAGCTTCAAACTGTTACAGTTCTTGACTGGTAGGAAACGCGCTCCTTCCTCTGTTATCAGGGTGAATCTGAATCTCAACTTGCCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTACCCTGTGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAA-TTTTAGCTTATGGTAGTCCATGCAG Aliatypus_thompsoni_MY1524_Loc20 GGTTCACAAAGTTGAGCAGCCATCGAAGGTCTCCATGATC-GGTCTTAGCAAGAACTTTGTTCTTATAATTAATGTTGGAAGTGTTCTATGGCATAGACGGTCGCAAGGAATTCATGACGAGTGACATAACAGTTTTGTTCTGGCTTGAACAGGGTCTTGTTAAAATACGCGATTACATTCTCTTGACCATTATATATTTTTGACAATATTGCTCCAATACCGCAATTACTTGGGTCGGTGTCAAGGATAAATGGCGCATCTGGAATTCGGTATGCAAGTATGAGCGTAGACAGCAGCAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGACTCTTCAATTGGACTCGAGCGATGGAAATGTTGGGATGGTGGAAAATACTTGGACGAAGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGTGCAGTTGATAGACGTTGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCGGCCCAAGTATTTCGCATGTCTCTGAAACAACTTGCATTTGGTGGAGCTTAACTTTCGTCTGGAAGCAGCTAATCGCAAGAAGACTTCCCTGATTTTGCTGATGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGCCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGTTTTGGAAGGCAGCTGGAACGTTGCACAACCACAAAAGACATAGCTTCAAACAGTTACAGTTCTTGACTGGTAGGAAACGCGGTCCTTCCTCTGTTATCAGGGTGAATCTGAATCTCAACTTGCCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTATCCTGTGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAACTTTTAGCTTATGGTAGTCCATGCAG Aliatypus_thompsoni_MY1526_Loc17 GGTTCACAAAGTTGAGCAGCCATCGAAGGTCTGCATGATC-GGTCTTAGCAAGAACTTTGTTCTTRTAATTAATGTTGGAAGTGTTCTATGGCATAGACGGTCGCAAGGAATTCATGATGAGTGACATAACAGTTTTGTTCTGGCTTGAACAGGGTGTTGTTAAAGTACGCGATTACATTCTCTTGACCATTATATATTTTTGACAATATTGCTCCAATACTGCAATTACTGGCGTCGGTGTCAAGGATAAATGGCGCATCTGGAATTYGGTATGCAAGTATGAGCGTAGACAGCAGCAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGACTCTTCAATTGGACTCGAGCGATGGAAATGTTGGGATGGTGGAAAATACTTGGACGAAGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGTGCAGTTGAYAGACGTTGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCGGCCCAAGTATTTCGCATGTCGCTGAAACAAYTTGCATTTGGTGGACCTTAACTTTCGTCTGGAAGCAGCTAATCGCAAGAAGACTTCCCTRATTTTGCTGATGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGCTATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCACAACCACAAAAGACATAGCTTCAAACTGTTACAGTTCTTGRCTGGTAGGAAACGCGGTCCTTCCTCTGTTATCAGGG------TGAATCTCAACTTGCCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTATCCTGTGCAATKGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAACTTTTAGCTTATGGTAGTCCATGCAG Aliatypus_thompsoni_MY4062_Loc10 GGTTCACAAAGTTGAGCAGCCATCGAAGGTCTGCATGATA-GGTCTTAGCAAGAACTTTGTTCTTATAATTGATGTTGGAAGTGTTCTATGGCATAGGCGGTAGCAAGGAATTCATGACGAGTGACATAACAGTTTCGTTCTGGCTTGAACAGGGTCTTGTTAAAGTACGCGATTACATTCTCTTGACCATTATATATTTTTGACAATATTGCTCCAATACCGCAATTACTGGCGTCGGTGTCAAGGATAAATGGCGCATCTGGAATTCAGTATGCAAGTATGAGCGTAGACAGCAGCAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGACTCTTCAATTGGACTCGAGCGATGAAAATGTTGGGATGGTGGAAAATACTTGGACGAAGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGTGCAGTTGACAGACGTTGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTAGACGCCATCTACAGAAATCACGCGGCCCAAGTATTTCGCATGTCGCTGAAACAACTTGCATTTGGTGGAGCTTAACTTTCGTCTGGAAGCAGATAATCGCAAGAAGACTTCCCTGATTTTGCTGATGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGTCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAATCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCACAACCACAAAAGACATAGCTTCAAACTGTTACAGTTCTTGACTGGTAGGAAACGCGGTCCTTCCTCTGTTATCAGGG------TGAATCTCAACTTGCCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACGCCTTGGACCCTGACAAGGAGTCCAGAACAATATCCATCCTGTGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAACTTTTAGCTTATGGTAGTCCACGCAG Aliatypus_thompsoni_MY1723_Loc14 GATTCACAAAGTTGAGCAGC------------------------CTTAGCAAGAACTTTGTTCTTATAATTGATGTTGGAAGTGTTCTATGGCATAGGCGGTAGCAAGGAATTCATGACGGGTGACGTAACATTTTTGTTCTGGCATGAACAGGGTCTTGTTAAAGTACGCGATTGCATTCTCTTGATTATTATATATTTGGGACAATACTGCTCCAATACCGCAATTACTGGCGTCGGTGTCAAGGATAAATGGCGCATCTGGAATTTAGTATGCAAGTATGGGC----ATAGCAGCAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTTGAGATCAATTGTAAATCTTTTGACTCTTCAATTGGACTCGAGCGATGGAAATGTTGGGATGGTGGAAAATCCTTGGACGAAGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGTGCAGTTGATAGACGTTGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCGGCCCAAGTATTTCGCATGTCGCTGAAACAACTTGCATTTGGTGGAGCTTAACTTTCGTCTGGAAGCAGCTAATCGCAAGAAGACTTCCCTGATTTTGCTGATGTGATGATC-AAATCCATTAGTCCTTGCCAATAATGATGCTGCCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCACAACCACAAAAGACATAGCTTCAAACTGTTACAGTTCTTGACCGGTAGGAAACGCGGTCCTTCCTCTGTTATCAGGG------TGAATCTCAACTTGCCAGCAGCCGCTCTTGACATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTATCCTGTGCAATGGATAGCTGTTCTCTTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAACTTTTAGCTTATGGTAGTCCATGCAG Aliatypus_thompsoni_MY4072_Loc19 GATTCACAAAGTTGAGCAGC------------------------CTTAGCAAGAACTTTGTTCTTATAATTGATGTTGGAAGTGTTCTATGGCATAGGCGGTAGCAAGGAATTCATGACGGGTGACGTAACATTTTTGTTCTGGCATGAACAGGGTCTTGTTAAAGTACGCGATTGCATTCTCTTGATTATTATATATTTGGGACAATACTGCTCCAATACCGCAATTACTGGCGTCGGTGTCAAGGATAAATAGCGCATCTGGAATTTAGTATGCAAGTATGGGC----ATAGCAGCAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGACTCTTCAATTGGACTCGAGCGATGGAAATGTTGGGATGGTGGAAAATACTTGGACGAAGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGTGCAGTTGATAGACGTTGGTCAGTCGTGGCCATGCTTTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCGGCCCAAGTATTTCGCATGTCGCTGAAACAACTTGCATTTGGTGGAGCTTAACTTTCGTCTGGAAGCAGCTAATCGCAAGAAGACTTCCCTGATTTTGCTGATGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGCCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCACAACCACAAAAGAC--AGTTTCAAACTGTTACAGTTCTTGACTGGTAGGAAACGCGGTCCTTCCTCTGTTATCATTG------TGAATCTCAACTTGCCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTATCCTGTGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAA-TTTTAGCTTATGGTAGTCCATGCAG Aliatypus_thompsoni_MY1739_Loc22 GGTTCACAAAGTTGAGCAGCCATCGAAGGTCTGCATGATC-GGTCTTAGCAAGAACTTTGTTCTTATAATTAATGTTGGAAGTGTTCTATGGCATAGACGGTCGCAAGGAATTCATGACGAGTGACATAACAGTTTTGTTCTGGCTTGAACAGGGTCTTGTTAAAGTACGCGATTACATTCTCTTGACCATTATATTTTTTTGACAATATTGCTCCAATACCGCAATTACTGGCGTCGGTGTCAAGGATAAATGGCGCATCTGGAATTCGGTATGCAAGTATGAGCGTAGACAGCAGCAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGGCTCTTCAATTGGACTCGAGCGATGGAGATGTTGGGATGGTGGAAAATACTTGGACGAAGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGTGCAGTTGATAGACGTTGGTCAGTCGTGGCCATGCTCTAAGAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCGGCCCAAGTATTTCGCATGTCGCTGAAACAACTTGCATTTGGTGGAGCTTAACTTTCGTCTGGAAGCAGCTAATCGCAAGAAGACTTCCCTGATTTTGCTGATGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGTCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAACACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCACAACCACAAAAGACATAGCTTCGAACTGTTACAGTTCTTGACTGGTAGGAAACGCGGTCCTTCCTCTGTTATCAGGG------TGAATCTCAACTTGCCAGCAGCCGCTCTTAAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTATCCTGTGCAACGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAACTTTTAGCTTATGGTAGTCCATGCAG Aliatypus_thompsoni_MY471_Loc78 ??????????GTTGAGCAGC------------------------CTTAGCAAGAACTTTGTTCTTATAATTCATGTTGGAAGTGTTCTATGGCATAGGCGGTAGCAAGGAATTCATGACGGGTGACGTAACATTTTTGTTCTGGCTTGAACAGGGTCTTGTTAAAGTACGCGATTGCATTCTCTTGATTATTATATATTTGGGACAATACTGCTCCAATACCGCAATTACTGGCGTCGGTGTCAAGGATAAATGGCGCATCTGGAATTTGGTATGCAAGTATGGGCGTAGACAGCAGAAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGGCTCTTCAATTGGACTCGAGCGATGGAAATGTTGGGATGGTGGAAAATACTTGGACGAAGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGTGCAGTTGATAGACGTTGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCGGCCCAAGTATTTCGCATGTCGCTGAAACAACTTGCATTTGGTGAAGCTTAACTTTCATCTGGAAGCAGCTAATCGCAAGAAGACTTCCCTGATTTTGCTGATGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGTCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCGCAACCACAAAAGACATAGCTTCAAACATTTACAGTTCTTGACTGGTAGGAATCGCGGTCCTTCCTCTGTTATCAGGG------TGAATCTCAACTTGCCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTATCCTGTGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAACTTTTAGCTTATGGTAGTCCATGCAG Aliatypus_thompsoni_MY1452_Loc75 GGTTCACAAAGTTGAGCAGC------------------------CTTAGCAAGAACTTTGTTCTTATAATTCATGTTGGAAGTGTTCTATGGCATAGGCGGTAGCAAGGAATTCATGACGGGTGACGTAACATTTTTGTTCTGGCTTGAACAGGGTCTTGTTAAAGTACGCGATTGCATTCTCTTGATTATTATATATTTGGGACAATACTGCTCCAATACCGCAATTACTGGCGTCGGTGTCAAGGATAAATGGCGCATCTGGAATTTGGTATGCAAGTATGGGCGTAGACAGCAGAAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGGCTCTTCAATTGGACTCGAGCGATGGAAATGTTGGGATGGTGGAAAATACTTGGACGAAGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGTGCAGTTGATAGACGTTGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCGGCCCAAGTATTTCGCATGTCGCTGAAACAACTTGCATTTGGTGAAGCTTAACTTTCATCTGGAAGCAGCTAATCGCAAGAAGACTTCCCTGATTTTGCTGATGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGTCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCGCAACCACAAAAGACATAGCTTCAAACATTTACAGTTCTTGACTGGTAGGAATCGCGGTCCTTCCTCTGTTAYCAGGG------TGAATCTCAACTTGCCAGCAGCCGCTCTTGAGATCCAAAGYGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATARTATCTATCCTGTGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCTTSTGGCAGTCCACACAGAAACTTTTAGCTTATGGTAGTCCATGCAG Aliatypus_thompsoni_MY1454_Loc74 GGTTCACAAAGTTGAGYAGC------------------------CTTAGCAAGAACTTTGTTCTTATAATTCATGTTGGAAGTGTTCTATGGCATAGGCGGTAGCAAGGAATTCATGACGGGTGACGTAACATTTTTGTTCTGGCTTGAACAGGGTCTTGTTAAAGTACGCGATTGCATTCTCTTGATTATTATATATTTGGGACAATACTGCTCCAATACCGCAATTACTGGCKTCGGTGTCAAGGATAAATGGCGCATCTGGAATTTGGTATGCAAGCATGGGCGTAGACAGCAGAAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGGCTCTTCAATTGGACTCGAGCGATGGAAATGTTGGGATGGTGGAAAATACTTGGACGAAGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGTGCAGTTGATAGACGTTGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCGGCCCAAGTATTTCGCATGTCGCTGAAACAACTTGCATTTGGTGAAGCTTAACTTTCATMTGGAAGCAGCTAATCGCAAGAAGACTTCCCTGATTTTGCTGATGTGATGGTC-AAATCCATTAGTCYTTGCCAATAATGATGCTGTCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCGCAACCACAAAAGACATAGCTTCAAACATTTACAGTTCTTGACTGGTAGGAATCGCGGTCCTTCCTCTGTTATCAGGG------TGAATCTCAACTTGCCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTATCCTGTGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAACTTTTAGCTTATGGTAGTCCATGCAG Aliatypus_thompsoni_MY1483_Loc59 GGTTCACAAAGTTGAGCAGC------------------------CTTAGCAAGAACTTTGTTCTTATAATTCATGTTGGAAGTGTTCTATGGCATAGGCGGTAGCAAGGAATTCATGACGGGTGACGTAACATTTTTGTTCTGGCTTGAACAGGGTCTTGTTAAAGAACGCGATTGCATTCTCTTGATTATTATATATTTGGGACAATACTGCTCCAATACCTCAATTACTGGCGTCGGTGTCAAGGATAAATGGCGCATCTGGAATTTGGTATGCAAGTATGGGCGTAGACAGCAGAAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGGCTCTTCAATTGGACTCGAGCGATGGAAATGTTGGGATGGTGGAAAATACTTGGACGAAGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGTGCAGTTGATAGACGTTGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCGGCCCAAGTATTTCGCATGTCGCTGAAACAACTTGCATTTGGTGAAGCTTAACTTTCATCTGGAAGCAGCTAATCGCAAGAAGACTTCCCTGATTTTGCTGATGTAATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGTCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCGCAACCACAAAAGACATAGCTTCAAACATTTACAGTTCTTGACTGGTAGGAATCGCGGTCCTTCCTCTGTTATCAGGG------TGAATCTCAACTTGCCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTATCCTGTGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAACTTTTAGCTTATGGTAGTCCATGCAG Aliatypus_thompsoni_MY1497_Loc51 GGTTCAC-AAGTTGAGCAGC------------------------CTTAGCAAGAACTTTGTTCTTATAATTCATGTTGGAAGTGTTCTATGGCATAGGCGGT?????????????????????????????????????????GCATTAACAGGGTCTTGTTAAAGTACGCGATTGCATTCTCTTGATTATTATATATTTGGGACAATACTGCTCCAATACCGCAATTACTGGCGTCGGTGTAAAGGATAAATGGCGCATCTGGAATTTGGTATGCAAGTATGGGCGTAGACAGCAGAAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGGCTCTTCAATTGGACTCGAGCGATAGAAATGTTGGGATGGTGGAAAATCCTTGGACGAAGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGCGCAGTTGATAGACGTTGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCGGCCCAAGTATTTCGCATGTCGCTGAAACAACTTGCATTTGGTGGAGCTTAACTTTCGTCTGGAAGCAGCTAATCGCAAGAAGACCTTCCTGATTTTGCTGATGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGCCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCACAACCACAAAAGACATAGCTTCAAACTGTTACAGTTCTTGACTGGTAGGAAACGCGGTCCTTCCTCTGTTATCAGGG------TGAATCTCAACTTACCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTATCCTGTGCAATGGATAGCTGTCCTCCTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAACTTTTAGCTTATGGTAGTCCATGCAG Aliatypus_thompsoni_MY1507_Loc44 GGTTCACAAAGTTGAGCAGC------------------------CTTAGCAAGAACTTCGTTCTTATAATTCATGTTGGAAGTGTTCTATGGCAGAGGCGGTAGCAAGGAATTCATGACGGGTGACGTAACATTTTTGTTCTGGCATTAACAGGGTCTTGTTAAAGTACGCGATTGCATTCTCTTGATTATTATATATTTGGGACAATACTGCTCCAATACCGCAATTACTGGCGTCGGTGTAAAGGATAAATGGCGCATCTGGAATTTGGTATGCAAGTATGGGCGTAGACAGCAGAAA--ATATTGTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGGCTCTTCAATTGGACTCGAGCGATAGAAATGTTGGGATGGTGGAAAATCCTTGGACGAAGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGTGCAGTTGATAGACGTTGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCGGCCCAAGTATTTCGCATGTCGCTGAAACAACTTGCATTTGGTGGAGCTTAACTTTCGTCTGGAAGCAGCTAATCGCAAGAAGACCTTCCTGATTTTGCTGATGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGCCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCACAACCACAAAAGACATAGCTTCAAACTGTTACAGTTCTTGACTGGTAGGAAACGCGGTCCTTCCTCTGTTATCAGGG------TGAATCTCAACTTACCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTATCCTGTGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAACTTTTAGCTTATGGTAGTCCATGCAG Aliatypus_thompsoni_MY4118_Loc36 GGTTCACAAAGTTGAGCAGC------------------------CTTAGCAAGAACTTTGTTCTTATAATTCATGTTGGAAGTGTTCTATGGCATAGGCGGTAGCAAGGAATTCATGACGGGTGACGTAACATTTTTGTTCTGGCTTGAACAGGGTCTTGTTAAAGTACGCGATTGCATTCTCTTGATTATTATATATTTGGGACAATACTGCTCCAATACCGCAATTACTGGCGTCGGTGTAAAGGATAAATGGCGCATCTGGAATTTATTATGCAAGTATGGGCGTAGACAGCAGAAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGGCTCTTCAATTGGACTCGAGCGATAGAAATGTTGGGATGGTGGAAAATCCTTGGACGAAGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGTGCAGTTGATAGACGTTGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCGGCCCAAGTATTTCGCATGTCGCTGAAACAACTTGCATTTGGTGGAGCTTAACTTTCGTCTGGAAGCAGCTAATCGCAAGAAGACCTTCCTGATTTTGCTGATGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGCCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCACAACCACAAAAGACATAGCTTCAAACTGTTACAGTTCTTGACTGGTAGGGA--------------CTGTTATCAGGG------TGAATCTCAACTTACCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTATCCTGTGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCAGTCCACACAGAAACTTTTAGCTTATGGTAGTCCATGCAG Aliatypus_thompsoni_MY4314_Loc39 GGTTCACAAAGTTGAGCAGC------------------------CTTAGCAAGAACTTTGTTCTTATAATCCATGTTGGAAGTATTCAATGGCATAGGCGGTAGCAAGGAATTCATGACGGGTGACGTAACATTTTTGTTCTGGCTTGAACAGGGTCTTGTTAAAGTACGCGATTGCATTCTCTTGATTATTATATATTTGGGACAATACTGCTCCAATACCGCAATTACTGGCGTCGGTGTCAAGGATAAATGGCGCATCTGGAATTTGGTATGCAAGTATGGGCGTAGACAGCAGAAA--ATATTTTAGCTTCGTAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGGCTCTTCAATTGGACTCGAGCGATGGAAATGTTGGGATGGTGGAAAATCCTTGGACGACGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGTGCAGTTGATAGACGTTGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCGGCCCAAGTATTTCGCATGTCGCTGAAACAACTTGCATTTGGTGGAGCTTAACTTTCGTCTGGAAGCAGCTAATCGCAAGAAGACTTCCCTGATTTTGCTGATGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGCCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGAACGTTGCACAACCACAAAAGACATAGCTTCAAACTGTTACAGTTCTTGACTGGTAGGAAACGCGGTCCTTCCTCTGTTATCAGGG------TGAATCTCAACTTGCCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAAGAGTCCAGAATAGTATCTATCCTATGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCTGTCCACACAGAAACTTTTAGCTTATGGTAGTCCATGCAG Aliatypus_thompsoni_MY4319_Loc37 GGTTCACAAAGTTGAGCAGC------------------------CTTAGCAAGAACTTTGTTCTTATAATTCATGYTGGAAGTATTCAATGGCATAGGCKGTAGCAAGGAATTCATGACGGGTGACGTAACATTTTTGTTCTGGCTTGAACAGGGTCTTGTTAAAGTACGCGATTGCATTCTCTTGATTATTATATATTTGGGACAATACTGCTCCAATACCGCAATTACTGGCGTCGGTGTCAAGGATAAATGGCGCATGTGGAATTTGGTATGCAAGTATGGGCGTAGACAGCAGAAA--ATATTTTAGCTTCGYAAAAGCTGCCTCGCACTCTGGAGATCAATTGTAAATCTTTTGGCTCTTCAATTGGACTCGAGCGATGGAAATGTTGGGATGGTGGAAAATCCTTGGACGACGTGTCGGTAATTGATACAGAGTCCCAGAAAGCTGTGCAGTTGATAGACGTTGGTCAGTCGTGGCCATGCTCTAACAGCCTCAATCTTGTTTGGACGCCATCTACAGAAATCACGCGGCCCAAGTATTTCGCATGTCGCTGAAACAACTTGCATTTGGTGGAGCTTAACTTTCGTCTGGAAGCAGCTAATCGCAAGAAGACTTCCCTGATTTTGCTGATGTGATGGTC-AAATCCATTAGTCCTTGCCAATAATGATGCTGCCATCCAAATAGACGACGCAGGCTTCTAAAGAAAATCTCCAAAGCACAGTCTCCATCAAGCTTTGGAAGGCAGCTGGARCGTTGCACAACCACAAAAGACATAGCTTCAAACTGKTACAGTTCTTGACTGGTAGGAAACGCGGTCCTTCCTCTGTTATCAGGG------TGAATCTCAACTTGCCAGCAGCCGCTCTTGAGATCCAAAGTGGAGAACTCCTTGGACCCTGACAAGGAGTCCAGAATAGTATCTATCCTATGCAATGGATAGCTGTCCTCTTTCGTCAGGTCATTTAGCCTGTGGCTGTCCACACAGAAACTTTTAGCTTATGGTAGTCCATGCAG ; END; BEGIN TREES; Title 'Trees from "Methyl_clock.tre"'; LINK Taxa = Taxa; TRANSLATE 1 Aliatypus_coylei_MY1642, 2 Aliatypus_starretti_MY485_Loc1, 3 Aliatypus_roxxiae_MY472_Loc26, 4 Aliatypus_roxxiae_MY1740_Loc27, 5 Aliatypus_roxxiae_MY1742_Loc30, 6 Aliatypus_roxxiae_MY4039_Loc29, 7 Aliatypus_roxxiae_MY4332_Loc25, 8 Aliatypus_thompsoni_MY1524_Loc20, 9 Aliatypus_thompsoni_MY1526_Loc17, 10 Aliatypus_thompsoni_MY4062_Loc10, 11 Aliatypus_thompsoni_MY1723_Loc14, 12 Aliatypus_thompsoni_MY4072_Loc19, 13 Aliatypus_thompsoni_MY1739_Loc22, 14 Aliatypus_thompsoni_MY471_Loc78, 15 Aliatypus_thompsoni_MY1452_Loc75, 16 Aliatypus_thompsoni_MY1454_Loc74, 17 Aliatypus_thompsoni_MY1483_Loc59, 18 Aliatypus_thompsoni_MY1497_Loc51, 19 Aliatypus_thompsoni_MY1507_Loc44, 20 Aliatypus_thompsoni_MY4118_Loc36, 21 Aliatypus_thompsoni_MY4314_Loc39, 22 Aliatypus_thompsoni_MY4319_Loc37; TREE PAUP_1 = (1:0.040974,((2:0.0142649,(((3:0.0049169,7:0.0049169):0.004755,(4:6.594E-4,(5:0.0,6:0.0):6.594E-4):0.0090126):0.0020464,((11:0.006417,12:0.006417):0.0053013,(((14:0.0012318,(15:0.0012318,17:0.0012318):0.0):0.0,16:0.0012318):0.0072989,(((18:0.0022804,19:0.0022804):0.0015933,20:0.0038737):0.004657,(21:0.0017304,22:0.0017304):0.0068002):0.0):0.0031877):0.0):0.0025465):0.0040357,(((8:0.0069783,9:0.0069783):0.0012601,13:0.0082384):0.0026912,10:0.0109296):0.0073709):0.0226735):0.0; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 1023; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 1023; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1023; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1365524580563; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 164419095039234490; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 6881434587094508740; mqVersion 275; checksumv 0 3 2206130384 null getNumChars 1023 numChars 1023 getNumTaxa 22 numTaxa 22 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 501991.0 sumSquares -7.37869762948382E19 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 284; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1272 751; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #164419095039234490 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #164419095039234490; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; getTable; tell It; rowNamesWidth 283; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 988 684; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #164419095039234490 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 1909.1365115145563.819499397677184898; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 988 684; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.ladderize; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '(1:0.040974,((10:0.0109296,(13:0.0082384,(8:0.0069783,9:0.0069783):0.0012601):0.0026912):0.0073709,(2:0.0142649,(((3:0.0049169,7:0.0049169):0.004755,(4:6.594E-4,(5:0.0,6:0.0):6.594E-4):0.0090126):0.0020464,((11:0.006417,12:0.006417):0.0053013,((16:0.0012318,(14:0.0012318,(15:0.0012318,17:0.0012318):0.0):0.0):0.0072989,((21:0.0017304,22:0.0017304):0.0068002,(20:0.0038737,(18:0.0022804,19:0.0022804):0.0015933):0.004657):0.0):0.0031877):0.0):0.0025465):0.0040357):0.0226735):0.0;'; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #6881434587094508740 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 165; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 988 684; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.chromaseq.ColorQuality.ColorQuality; tell It; toggleAmbiguities on; toggleMarks on; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; getEmployee #mesquite.chromaseq.SourceFileInfoEditor.SourceFileInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;