#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=75; TAXLABELS Diaporthe_foeniculina_CBS187.27 Diaporthe_foeniculina_AR3607 Diaporthe_foeniculina_CBS129528 Diaporthe_foeniculina_CBS123208 Diaporthe_foeniculina__FAU462 Diaporthe_foeniculina_AR5150 Diaporthe_foeniculina_AR5143 Diaporthe_foeniculina_DP0391 Diaporthe_foeniculina_DP0392 Diaporthe_foeniculina_DP0454 Diaporthe_foeniculina_AR5146 Diaporthe_foeniculina_AR5147 Diaporthe_foeniculina_AR5152 Diaporthe_foeniculina_AR5142 Diaporthe_foeniculina_AR5144 Diaporthe_foeniculina_AR5151 Diaporthe_foeniculina_FAU460 Diaporthe_foeniculina_MEP12891 Diaporthe_foeniculina_AR5145 Diaporthe_cytosporella_FAU461 Diaporthe_cytosporella_AR5148 Diaporthe_cytosporella_AR5149 Diaporthe_canthii_CBS132533 Diaporthe_citri_AR3403 Diaporthe_citri_AR3405 Diaporthe_citri_AR4472 Diaporthe_citri_AR3407 Diaporthe_citri_ICMP10355 Diaporthe_citri_ICMP6981 Diaporthe_citri_AR3404 Diaporthe_citri_AR4471 Diaporthe_citri_AR4470 Diaporthe_citri_AR4473 Diaporthe_citri_AR3406 Disporthe_citri_AR4469 Diaporthe_citri_CT003 Diaporthe_citri_DA103 Diaporthe_citri_AR4370 Diaporthe_citri_AR4350 Diaporthe_citri_AR4364 Diaporthe_citri_FAU583 Diaporthe_vaccinii_CBS160.32 Diaporthe_vaccinii_FAU446 Diaporthe_vaccinii_DF5032 Diaporthe_vaccinii_FAU633 Diaporthe_vaccinii_FAU468 Diaporthe_alleghaniensis_CBS495.72 Diaporthe_cotoneastri_CBS439.82 Diaporthe_cotoneastri_DP0667 Diaporthe_pterocarpi_MFLUCC10575 Diaporthe_pterocarpi_MFLUCC10588 Diaporthe_pterocarpi_MFLUCC10571 Diaporthe_thunbergii_MFLUCC10576a Diaporthe_thunbergii_MFLUCC10576b Diaporthe_thunbergii_MFLUCC10576c Diaporthe_pterocarpicola_MFLUCC10580a Diaporthe_pterocarpicola_MFLUCC10580b Diaporthe_rudis_CBS113201 Diaporthe_rudis_AR3438 Diaporthe_rudis_AR3646 Diaporthe_rudis_AR3422 Diaporthe_rudis_DA243 Diaporthe_rudis_ER286D Diaporthe_rudis_DA244 Diaporthe_rudis_DP0423 Diaporthe_rudis_ER285A Diaporthe_rudis_ER286C Diaporthe_rudis_DPG01 Diaporthe_rudis_AR3654 Diaporthe_rudis_DPG02 Diaporthe_rudis_DP0350 Diaporthe_cyanaroidis_CBS122676 Diaporthe_rudis_CBS113487 'Diaporthe ampelina DLR1_19' Diaporthe_ampelina_CBS114016 ; END; BEGIN CHARACTERS; TITLE Diaporthe_EF1; DIMENSIONS NCHAR=377; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Diaporthe_foeniculina_CBS187.27 -----------GTTAGTAAACACCACAATCCCAGCAC-------CAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCG-------------??? Diaporthe_foeniculina_AR3607 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------CAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_foeniculina_CBS129528 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------CAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_foeniculina_CBS123208 --------AAGGTTAGTAAACACCACAATCCCAGCAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCG-------------??? Diaporthe_foeniculina__FAU462 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_foeniculina_AR5150 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_foeniculina_AR5143 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_foeniculina_DP0391 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_foeniculina_DP0392 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_foeniculina_DP0454 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_foeniculina_AR5146 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_foeniculina_AR5147 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_foeniculina_AR5152 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_foeniculina_AR5142 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_foeniculina_AR5144 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_foeniculina_AR5151 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_foeniculina_FAU460 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_foeniculina_MEP12891 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_foeniculina_AR5145 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGCAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGTGGCTCGTCGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCACACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGTCCACCATCAACCTCAACC-----CTTCAAT---------------------TATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_cytosporella_FAU461 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGAAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGTGCGGTTGTTCGTGCGGTTCGTGGCACT---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCATACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGCCCACCATCAACCTCAACC-----CTCCAATATCACCATTT---AAAAATTGTATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_cytosporella_AR5148 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGAAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGAGCGGTTGTTCGAGCGGTTCGAGGCACA---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCATACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGCCCACCATCAACCTCAACC-----CTCCAATATCACCATTT---AAAAATTGTATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_cytosporella_AR5149 CGAGAAGGAAGGTTAGTAAACACCACAATCCCAGAAC-------AAACTACCTTGTCCT-CGCATTTTGCCCCAAAT-CATCAGCGAGCGGTTGTTCGAGCGGTTCGAGGCACA---GGGCAGCGCATTTTC-ACCCCGCCCTCTGGATTTTTCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCATACACCCAAAACCCTGTTACATCACC----CACTCCATGCCACA-------------ACTACGCCCACCATCAACCTCAACC-----CTCCAATATCACCATTT---AAAAATTGTATCA-AAAAACATGCTGACCTTTCCTTCTTCACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_canthii_CBS132533 CGAGAAGGAAGGTTAGTAAACATCGCAATCACACAAC-------ATCGTGCCCTGCCCT-CGCATTTTGCCCCATAT-CATCAGCTTGCGGCTGCTCTTGCGGCTCGTCGCACT---GGGAGGCGCATTTTG-ACCCCTCCCTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCTGATGCCCAAAACCCTGTTACATCGCC----CACTCCCCGCCATC-------------AAAACGCCTACCATCAACCTCATCGTCCGCTTTAAACACAACGTGTC---AGAAATCGCATCG-AAACCCATACTAACCTTTCTATCTATACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_AR3403 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------TTGCTCCTCTGCCCTTCGCACTGCACCTCAAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_AR3405 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------TTGCTCCTCTGCCCTTCGCACTGCACCTCAAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_AR4472 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------TTGCTCCTCTGCCCTTCGCACTGCACCTCAAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_AR3407 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------TTGCTCCTCTGCCCTTCGCACTGCACCTCAAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_ICMP10355 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------TTGCTCCTCTGCCCTTCGCACTGCACCTCAAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_ICMP6981 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------TTGCTCCTCTGCCCTTCGCACTGCACCTCAAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_AR3404 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------TTGCTCCTCTGCCCTTCGCACTGCACCTCAAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_AR4471 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------TTGCTCCTCTGCCCTTCGCACTGCACCTCAAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_AR4470 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------TTGCTCCTCTGCCCTTCGCACTGCACCTCAAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_AR4473 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------TTGCTCCTCTGCCCTTCGCACTGCACCTCAAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_AR3406 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------TTGCTCCTCTGCCCTTCGCACTGCACCTCAAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Disporthe_citri_AR4469 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------TTGCTCCTTTGCCCTTCGCACTGCACCTCAAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_CT003 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------ATGCTCCTCTGCCCTTCGCACTGCACCTCAAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_DA103 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------ATGCTCCTCTGCCCTTCGCACTGCACCTCAAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_AR4370 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------ATGCTCCTCTGCCCTTCGCACTGCACCTCCAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_AR4350 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------ATGCTCCTCTGCCCTTCGCACTGCACCTCCAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_AR4364 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------ATGCTCCTCTGCCCTTCGCACTGCACCTCCAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_citri_FAU583 CGAGAAGGAAGGTTAGTAAACACCACAGTCACGGAAC-------TTGCTCCTCTGCCCTTCGCACTGCACCTCAAAT-CATCAGCCTGCAGCTGCTCGCGCGGCTCGTCATATC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACTCCCAAAACCCTGCTGCATCACT----CAATCCTTGTCACCACCACCACCACC-AATACGCTCAC-ATCAATCCCATCGCCCTCTTTCAACACAACTC------GTGAAACGAGTCG-AATA-TATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_vaccinii_CBS160.32 --------AAGGTTAGTAAATACCACAATCACGGAAC-------ATGCCACCCTGCCCTCCATACTGCACCTCAAGT-CATCAGCCCGCAGCTGCTCGCGCGGCTCGTCATGCC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACATCCAAAACCCTGTTGCATCACT--------CTCACTCCTCGCCACCACCACC-AATACGCTCACGATCAATCCCATCG-CCTCTTTCAATACAACTC------TTGAAACGCGTCG-AACATTATGCTGACC-TTCTATCTACACAGCCGCCG-------------??? Diaporthe_vaccinii_FAU446 --------AAGGTTAGTAAATACCACAATCACGGAAC-------ATGCCACCCTGCCCTCCATACTGCACCTCAAGT-CATCAGCCCGCAGCTGCTCGCGCGGCTCGTCATGCC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACATCCAAAACCCTGTTGCATCACT--------CTCACTCCTCGCCACCACCACC-AATACGCTCACGATCAATCCCATCG-CCTCTTTCAATACAACTC------TTGAAACGCGTCG-AACATTATGCTGACC-TTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_vaccinii_DF5032 --------AAGGTTAGTAAATACCACAATCACGGAAC-------ATGCCACCCTGCCCTCCATACTGCACCTCAAGT-CATCAGCCCGCAGCTGCTCGCGCGGCTCGTCATGCC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACACCCAAAACCCTGTTGCATCACT--------CTCACTCCTCGCCACCACCACC-AATACGCTCACGATCAATCCCATCG-CCTCTTTCAATACAACTC------TTGAAACGCGTCG-AACGTTATGCTGACC-TTCTATCCACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_vaccinii_FAU633 --------AAGGTTAGTAAATACCACAATCACGGAAC-------ATGCCACCCTGCCCTCCATACTGCACCTCAAGT-CATCAGCCCGCAGCTGCTCGCGCGGCTCGTCATGCC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACACCCAAAACCCTGTTGCATCACT--------CTCACTCCTCGCCACCACCACC-AATACGCTCACGATCAATCCCATCG-CCTCTTTCAATACAACTC------TTGAAACGCGTCG-AACGTTATGCTGACC-TTCTATCCACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_vaccinii_FAU468 --------AAGGTTAGTAAATACCACAATCACGGAAC-------ATGCCACCCTGCCCTCCATACTGCACCTCAAGT-CATCAGCCCGCAGCTGCTCGCGCGGCTCGTCATGTC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCAATTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCGTACACCCAAAACCCTGTTGCATCACT--------CTCACTCCTCGCCACCACCACC-AATACGCTCACGATCAATCCCATCG-CCTCTTTCAATACAACTC------TTGAAACGCGTCG-AACATTATGCTGACC-TTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_alleghaniensis_CBS495.72 --------AAGGTTAGTAAATACCACAGTCACGGAAC-------ATGCCACCCTGCCCTCCATACTGCACCTCGAGTCCATCAGCCCGCAGCTGCTCGCGCGGCTCGTCATGTT---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GGGCTTATCTCCTACACCCAAAACCCTGTTGCATCACA--------CTCACTCCTCGCCACCACCACCAAATACGTTCACCATCAATCCCGCCG-CCTCTTTCAATACAACTC------TTGAAACGCGTCG-AACATTATGCTGACC-CTCTATCTACACAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_cotoneastri_CBS439.82 --------AAGGTTAGTAAATATCACAGTCACGGAAC-------ATGCTACCTGGCCCTCCATACTGCACCTC-AAT-CATCAGCACGCAGCTGCTCGCGCGGCCCGCCATGTC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGAGTGCGGGGTGCGCTTATCAGGGGGCGGGCTTATCTCCTACAACCAAAACCCTGTTACATCACT------CACTCAATCCTTGTCACCACCACC-AATACGCTCACCATCAACCCCATCG-CCTCTTTCAACACAACTC------GTGAAACGCGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCG-------------??? Diaporthe_cotoneastri_DP0667 --------------------------AGTCACGGAAC-------ATGCTACCTGGCCCTCCATACTGCACCTC-AAT-CATCAGCCCGCAGCTGCTCGCGCGGCCCGCCATGTC---GGGGGGCGCATTTTC-ACCCCTCGCTTTGGATTTTCCATTTTCAGTGCGAGTGCGGGGTGCGCTTATCAGGGGGCGGGCTTATCTCCTACAACCAAAACCCTGTTACATCACT------CACTCAATCCTTGTCACCACCACC-AATACGCTCACCATCAACCCCATCG-CCTCTTTCAACACAACTC------GTGAAACGCGTCG-AATATTATGCTGACC-CTCTATCTACACAGCCGCCG-------------??? Diaporthe_pterocarpi_MFLUCC10575 --------------------------CATGCAAGAAC-------GACTTACCTTGCCCT-CGCATTTTCCCTCAAGT--CCCCGCGTGCAGCTGTTCTGGCGGCTGGTCGCACT---GGGAGGCGCATTTTTGACCCCTCCCTCTGGATTTTCCACTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTTCTACA-CCAAAACCCTGTTACATCACC----TACTCCATGCCACC-------------AATACGTCCACCATCAATATTATTG-----CTCTGAAATACCTCGTTCCAAAAAATCGCATTG-AAAATAATGCTGACCTTGGCATCTTCACAGCCGCCG-------------??? Diaporthe_pterocarpi_MFLUCC10588 --------------------------TATGCAAGAAC-------GACTTACCTTGCCCT-CGCATTTTCCCTCAAGT--CCCCGCGTGCAGCTGTTCTGGCGGCTGGTCGCACT---GGGAGGCGCATTTTTGACCCCTCCCTCTGGATTTTCCACTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTTCTACA-CCAAAACCCTGTTACATCACC----TACTCCATGCCACC-------------AATACGTCCACCATCAATATTATTG-----CTCTGAAATACCTCGTTCCAAAAAATCGCATTG-AAAATAATGCTGACCTTGGCATCTTCACAGCCGCCG-------------??? Diaporthe_pterocarpi_MFLUCC10571 --------------------------CATGCAAGGAC-------GACTTACCTTGCCCT-CGCATTTTCCCTCAAGT--CCCCGCGTGCAGCTGTTCTGGCGGCTGGTCGCACT---GGGAGGCGCATTTTTGACCCCTCCCTCTGGATTTTCCACTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTTCTACA-CCAAAACCCTGTTACATCACC----TACTCCATGCCACC-------------AATACGTCCACCATCAATATTATTG-----CTCTGAAATACCTCGTTCCAAAAAATCGCATTG-AAAATAATGCTGACCTTGGCATCTTCACAGCCGCCG-------------??? Diaporthe_thunbergii_MFLUCC10576a ---------------------------------GCCC-------ATGCTGCCCTGCCCTCTACATC-CACCTTGAAC-CATCCGCGTGTGGCTGTTTGCGCAGCTCGTCATACCCTGGGGCGGCGCATTTTC-ACCCCTCGCTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCCCACTCCTAAAACCCTGCTGCATCTCA----CACTCGTGGCCACC---ACCACCACC-AACACCCTCAC-------------G---T-CTCCAATATAATAT------GATGATCGTATTGAAAAATGATGCTGACC-TTCAATCTGAACAGCCGCCG-------------??? Diaporthe_thunbergii_MFLUCC10576b ---------------------------------GCCC-------ATGCTGCCCTGCCCTCTACATC-CACCTTGAAC-CATCCGCGTGTGGCTGTTTGCGCAGCTCGTCATACCCTGGGGCGGCGCATTTTC-ACCCCTCGCTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCCCACTCCTAAAACCCTGCTGCATCTCA----CACTCGTGGCCACC---ACCACCACC-AACACCCTCAC-------------G---T-CTCCAATATAATAT------GATGATCGTATTGAAAAATGATGCTGACC-TTCAATCTGAACAGCCGCCG-------------??? Diaporthe_thunbergii_MFLUCC10576c ---------------------------------GCCC-------ATGCTGCCCTGCCCTCTACATC-CACCTTGAAC-CATCCGCGTGTGGCTGTTTGCGCAGCTCGTCATACCCTGGGGCGGCGCATTTTC-ACCCCTCGCTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCCCACTCCTAAAACCCTGCTGCATCTCA----CACTCGTGGCCACC---ACCACCACC-AACACCCTCAC-------------G---T-CTCCAATATAATAT------GATGATCGTATTGAAAAATGATGCTGACC-TTCAATCTGAACAGCCGCCG-------------??? Diaporthe_pterocarpicola_MFLUCC10580a -------------------------AATCATAAGCAT-------GCTCTCCTCTGCCCTCAGCCCTTTGCCTCAGAT-CATCAGTGTGCGGCTGTTGGTACAGCTCGTCATACT---GAGGGGCGCATTTTC-ACCCCTCGCTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCCTACACCCAAAACCCTGTTGCAACAACACACCCACCTTCCTTGCAGTTATTACCACC-ACTACATCCACCCTCAACCCCCATCGACATCCTTAAATCAATCA------AGCAAACCTCCAG-GAAATCATGCTGACT-TTCTATCTACATAGCCGCCG-------------??? Diaporthe_pterocarpicola_MFLUCC10580b -------------------------AATCATAAGCAT-------GCTCTCCTCTGCCCTCAGCCCTTTGCCTCAGAT-CATCAGTGTGCGGCTGTTGGTACAGCTCGTCATACT---GAGGGGCGCATTTTC-ACCCCTCGCTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GAGCTTATCTCCTACACCCAAAACCCTGTTGCAACAACACACCCACCTTCCTTGCAGTTATTACCACC-ACTACATCCACCCTCAACCCCCATCGACATCCTTAAATCAATCA------AGCAAACCTCCAG-GAAATCATGCTGACT-TTCTATCTACATAGCCGCCG-------------??? Diaporthe_rudis_CBS113201 --------AAGGTTAGTAAATATCAGAGCTACATTGCAATCGCAACACGCACTTCCCCTCTACACT---CTGCGAAT-CCACATTATGCGACCGCCTCTACGGCTCGTCATGCT---TGGTCGCAT-TTTTC-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GACCTTATCTCACAATCCCAAAACCCTGTTACATCACC----AGCCCCCTGTCACAACCACCACCAAC--------------------ACATCGCCCTCATTCAACCCACCATG-----ATGAATTACAATTGGAAATCGTGCTGACT-TTCTACTTTACCAGCCGCCG-------------??? Diaporthe_rudis_AR3438 CGAGAAGGAAGGTTAGTAAATATCAGAGCTACATTGCAATCGCAACACGCACTTCCCCTCTACACT---CTGCGAAT-CCACATTATGCGACCGCCTCTACGGCTCGTCATGCT---TGGTCGCAT-TTTTC-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GACCTTATCTCACAATCCCAAAACCCTGTTACATCACC----AGCCCCCTGTCACAACCACCACCAAC--------------------ACATCGCCCTCATTCAACCCACCATG-----ATGAATTACAATTGGAAATCGTGCTGACT-TTCTACTTTACCAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_rudis_AR3646 CGAGAAGGAAGGTTAGTAAATATCAGAGCTACATTGCAATCGCAACACGCACTTCCCCTCTACACT---CTGCGAAT-CCACATTATGCGACCGCCTCTACGGCTCGTCATGCT---TGGTCGCAT-TTTTC-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GACCTTATCTCACAATCCCAAAACCCTGTTACATCACC----AGCCCCCTGTCACAACCACCACCAAC--------------------ACATCGCCCTCATTCAACCCACCATG-----ATGAATTACAATTGGAAATCGTGCTGACT-TTCTACTTTACCAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_rudis_AR3422 CGAGAAGGAAGGTTAGTAAATATCAGAGCTACATTGCAATCGCAACACGCACTTCCCCTCTACACT---CTGCGAAT-CCACATTATGCGACCGCCTCTACGGCTCGTCATGCT---TGGTCGCAT-TTTTC-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GACCTTATCTCACAATCCCAAAACCCTGTTACATCACC----AGCCCCCTGTCACAACCACCACCAAC--------------------ACATCGCCCTCATTCAACCCACCATG-----ATGAATTACAATTGGAAATCGTGCTGACT-TTCTACTTTACCAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_rudis_DA243 CGAGAAGGAAGGTTAGTAAATATCAGAGCTACATTGCAATCGCAACACGCACTTCCCCTCTACACT---CTGCGAAT-CCACATTATGCGACCGCCTCTACGGCTCGTCATGCT---TGGTCGCAT-TTTTC-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GACCTTATCTCACAATCCCAAAACCCTGTTACATCACC----AGCCCCCTGTCACAACCACCACCAAC--------------------ACATCGCCCTCATTCAACCCACCATG-----ATGAATTACAATTGGAAATCGTGCTGACT-TTCTACTTTACCAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_rudis_ER286D CGAGAAGGAAGGTTAGTAAATATCAGAGCTACATTGCAATCGCAACACGCACTTCCCCTCTACACT---CTGCGAAT-CCACATTATGCGACCGCCTCTACGGCTCGTCATGCT---TGGTCGCAT-TTTTC-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GACCTTATCTCACAATCCCAAAACCCTGTTACATCACC----AGCCCCCTGTCACAACCACCACCAAC--------------------ACATCGCCCTCATTCAACCCACCATG-----ATGAATTACAATTGGAAATCGTGCTGACT-TTCTACTTTACCAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_rudis_DA244 CGAGAAGGAAGGTTAGTAAATATCAGAGCTACATTGCAATCGCAACACGCACTTCCCCTCTACACT---CTGCGAAT-CCACATTATGCGACCGCCTCTACGGCTCGTCATGCT---TGGTCGCAT-TTTTC-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GACCTTATCTCACAATCCCAAAACCCTGTTACATCACC----AGCCCCCTGTCACAACCACCACCAAC--------------------ACATCGCCCTCATTCAACCCACCATG-----ATGAATTACAATTGGAAATCGTGCTGACT-TTCTACTTTACCAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_rudis_DP0423 CGAGAAGGAAGGTTAGTAAATATCAGAGCTACATTGCAATCGCAACACGCACTTCCCCTCTACACT---CTGCGAAT-CCACATTATGCGACCGCCTCTACGGCTCGTCATGCT---TGGTCGCAT-TTTTC-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GACCTTATCTCACAATCCCAAAACCCTGTTACATCACC----AGCCCCCTGTCACAACCACCACCAAC--------------------ACATCGCCCTCATTCAACCCACCATG-----ATGAATTACAATTGGAAATCGTGCTGACT-TTCTACTTTACCAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_rudis_ER285A CGAGAAGGAAGGTTAGTAAATATCAGAGCTACATTGCAATCGCAACACGCACTTCCCCTCTACACT---CTGCGAAT-CCACATTATGCGACCGCCTCTACGGCTCGTCATGCT---TGGTCGCAT-TTTTC-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GACCTTATCTCACAATCCCAAAACCCTGTTACATCACC----AGCCCCCTGTCACAACCACCACCAAC--------------------ACATCGCCCTCATTCAACCCACCATG-----ATGAATTACAATTGGAAATCGTGCTGACT-TTCTACTTTACCAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_rudis_ER286C CGAGAAGGAAGGTTAGTAAATATCAGAGCTACATTGCAATCGCAACACGCACTTCCCCTCTACACT---CTGCGAAT-CCACATTATGCGACCGCCTCTACGGCTCGTCATGCT---TGGTCGCAT-TTTTC-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GACCTTATCTCACAATCCCAAAACCCTGTTACATCACC----AGCCCCCTGTCACAACCACCACCAAC--------------------ACATCGCCCTCATTCAACCCACCATG-----ATGAATTACAATTGGAAATCGTGCTGACT-TTCTACTTTACCAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_rudis_DPG01 -------------------------------------AATCGCAACACGCACTTCCCCTCTACACT---CTGCGAAT-CCACATTATGCGACCGCCTCTACGGCTCGTCATGCT---TGGTCGCAT-TTTTC-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GACCTTATCTCACAATCCCAAAACCCTGTTACATCACC----AGCCCCCTGTCACAACCACCACCAAC--------------------ACATCGCCCTCATTCAACCCACCATG-----ATGAATTACAATTGGAAATCGTGCTGACT-TTCTACTTTACCAGCCGCCG-------------??? Diaporthe_rudis_AR3654 CGAGAAGGAAGGTTAGTAA--ATCAGAGCTACATTGCAATCGCAACACGCACTTCCCCTCTACACT---CTGCGAAT-CCACATTATGCGACCGCCTCTACGGCTCGTCATGCT---TGGTCGCAT-TTTTC-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GACCTTATCTCACAATCCCAAAACCCTGTTACATCACC----AGCCCCCTGTCACAACCACCACCAAC--------------------ACATCGCCCTCATTCAACCCACCATG-----ATGAATTACAATTGGAAATCGTGCTGACT-TTCTACTTTACCAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_rudis_DPG02 -------------------------------------AATCGC-ACACGCACTTCCCCTCTACACT---CTGCGAAT-CCACATTATGCGACCGCCTCTACGGCTCGTCATGCT---TGGTCGCAT-TTTTC-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GACCTTATCTCACAATCCCAAAACCCTGTTACATCACC----AGCCCCCTGTCACAACCACCACCAAC--------------------ACATCGCCCTCATTCAACCCACCATG-----ATGAATTACAATTGGAAATCGTGCTGACT-TTCTACTTTACCAGCCGCCG-------------??? Diaporthe_rudis_DP0350 CGAGAAGGAAGGTTAGTAAATATCAGAGCTACATTGCAATCGCAACACGCACTTCCCCTCTACACT---CTGCGAAT-CCACATTATGCGACCGCCTCTACGGCTCGTCATGCT---TGGTCGCAT-TTTTC-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GACCTTATCTCACAATCCCAAAACCCTGTTACATCACC----AGCCCCCTGTCACAACCACCACCAAC--------------------ACATCGCCCTCATTCAACCCACCATG-----ATGAATTACAA-TGGAAATCGTGCTGACT-TTCTACTTTACCAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_cyanaroidis_CBS122676 CGAGAAGGAAGGTTAGTAAATATCAGAGCTACATTGCAATCGCAGCACACACTTCCCCTCTACACT---CTGCGAAT-CCACAGTATGCGACTGCTTCTAAGGCTCGTCATGCT---TGGTCGCAT-TTTTC-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GACCTTATCTCACACTCCCAAAACCCTGTTACATCACC----AGCCCCCTGTCACA---ACCACCAAC--------------------ACATCGCCCTCATTCAACCCGCCATG-----ATGAATTACTATTTGAAACCGTGCTGACT-TATCGCTTTACCAGCCGCCGAGCTTGGTAAGGG??? Diaporthe_rudis_CBS113487 CGAG-AAGAAGGTTAGTAAATATCAGAGCTACATTGCAATCGCAACACGCACTTCCCCTCTACACT---CTGCGAAT-CCACATTATGCGACCGCCTCTACGGCTCGTCATGCT---TGGTCGCAT-TTTTC-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGG----GACCTTATCTCACAATCCCAAAACCCTGTTACATCACC----AGCCCCCTGTCACAACCACCACCAAC--------------------ACATCGCCCTCATTCAACCCACCATG-----ATGAATTACAATTGGAAATCGTGCTGACT-TTCTACTTTACCAGCCGCCGAGCTTGGTAAGGG??? 'Diaporthe ampelina DLR1_19' --------AAGGTTAGTAAACATCACAATAACAGCAC-------ATGCAGTCTTGCCATTCATATGCACCTTAAAAT-CATCGGCTTGCGGCCGCCTGTGCAGCTCGTCA--CT---GGGGCGCAT-TTT-C-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGA----GAGCTTATCTCCCACTCGCCAAACCCTGGTGCACCACT--------CCCTGCCCCCACCACCGCCACC----------ACCACTCATCCTACTG-----CCTCCAAGTATA--------AAAGAATGCGCTG-GAATAGAAGCTAACA-ATCCATCTATACAGCCGCCGAGCTT--------??? Diaporthe_ampelina_CBS114016 --------AAGGTTAGTAAACATCACAATAACAGCAC-------ATGCAGTCTTGCCATTCATATGCACCTTAAAAT-CATCGGCTTGCGGCCGCCTGTGCAGCTCGTCA--CT---GGGGCGCAT-TTT-C-ACCCCTCGTTCTGGATTTTCCATTTTCAGTGCGGGTGCGGGGTGCGCTTATCAGA----GAGCTTATCTCCCACTCGCCAAACCCTGGTGCACCACT--------CCCTGCCCCCACCACCGCCACC----------ACCACTCATCCTACTG-----CCTCCAAGTATA--------AAAGAATGCGCTG-GAATAGAAGCTAACA-ATCCATCTATACAGCCGCCGAGCTT--------??? ; END; BEGIN TREES; Title Diaporthe_EF1_MP11; LINK Taxa = Taxa; TRANSLATE 1 Diaporthe_foeniculina_CBS187.27, 2 Diaporthe_foeniculina_AR3607, 3 Diaporthe_foeniculina_CBS129528, 4 Diaporthe_foeniculina_CBS123208, 5 Diaporthe_foeniculina__FAU462, 6 Diaporthe_foeniculina_AR5150, 7 Diaporthe_foeniculina_AR5143, 8 Diaporthe_foeniculina_DP0391, 9 Diaporthe_foeniculina_DP0392, 10 Diaporthe_foeniculina_DP0454, 11 Diaporthe_foeniculina_AR5146, 12 Diaporthe_foeniculina_AR5147, 13 Diaporthe_foeniculina_AR5152, 14 Diaporthe_foeniculina_AR5142, 15 Diaporthe_foeniculina_AR5144, 16 Diaporthe_foeniculina_AR5151, 17 Diaporthe_foeniculina_FAU460, 18 Diaporthe_foeniculina_MEP12891, 19 Diaporthe_foeniculina_AR5145, 20 Diaporthe_cytosporella_FAU461, 21 Diaporthe_cytosporella_AR5148, 22 Diaporthe_cytosporella_AR5149, 23 Diaporthe_canthii_CBS132533, 24 Diaporthe_citri_AR3403, 25 Diaporthe_citri_AR3405, 26 Diaporthe_citri_AR4472, 27 Diaporthe_citri_AR3407, 28 Diaporthe_citri_ICMP10355, 29 Diaporthe_citri_ICMP6981, 30 Diaporthe_citri_AR3404, 31 Diaporthe_citri_AR4471, 32 Diaporthe_citri_AR4470, 33 Diaporthe_citri_AR4473, 34 Diaporthe_citri_AR3406, 35 Disporthe_citri_AR4469, 36 Diaporthe_citri_CT003, 37 Diaporthe_citri_DA103, 38 Diaporthe_citri_AR4370, 39 Diaporthe_citri_AR4350, 40 Diaporthe_citri_AR4364, 41 Diaporthe_citri_FAU583, 42 Diaporthe_vaccinii_CBS160.32, 43 Diaporthe_vaccinii_FAU446, 44 Diaporthe_vaccinii_DF5032, 45 Diaporthe_vaccinii_FAU633, 46 Diaporthe_vaccinii_FAU468, 47 Diaporthe_alleghaniensis_CBS495.72, 48 Diaporthe_cotoneastri_CBS439.82, 49 Diaporthe_cotoneastri_DP0667, 50 Diaporthe_pterocarpi_MFLUCC10575, 51 Diaporthe_pterocarpi_MFLUCC10588, 52 Diaporthe_pterocarpi_MFLUCC10571, 53 Diaporthe_thunbergii_MFLUCC10576a, 54 Diaporthe_thunbergii_MFLUCC10576b, 55 Diaporthe_thunbergii_MFLUCC10576c, 56 Diaporthe_pterocarpicola_MFLUCC10580a, 57 Diaporthe_pterocarpicola_MFLUCC10580b, 58 Diaporthe_rudis_CBS113201, 59 Diaporthe_rudis_AR3438, 60 Diaporthe_rudis_AR3646, 61 Diaporthe_rudis_AR3422, 62 Diaporthe_rudis_DA243, 63 Diaporthe_rudis_ER286D, 64 Diaporthe_rudis_DA244, 65 Diaporthe_rudis_DP0423, 66 Diaporthe_rudis_ER285A, 67 Diaporthe_rudis_ER286C, 68 Diaporthe_rudis_DPG01, 69 Diaporthe_rudis_AR3654, 70 Diaporthe_rudis_DPG02, 71 Diaporthe_rudis_DP0350, 72 Diaporthe_cyanaroidis_CBS122676, 73 Diaporthe_rudis_CBS113487, 74 'Diaporthe ampelina DLR1_19', 75 Diaporthe_ampelina_CBS114016; TREE PAUP_1 = (((((((((1:0.0,2:0.0,3:0.0):1.0,4:0.0,5:0.0,6:0.0,7:0.0,8:0.0,9:0.0,10:0.0,11:0.0,12:0.0,13:0.0,14:0.0,15:0.0,16:0.0,17:0.0,18:0.0,19:0.0):4.0,(20:0.0,(21:0.0,22:0.0):4.0):3.0):21.0,(50:0.0,51:0.0,52:1.0):29.0):13.0,23:24.0):13.0,((56:0.0,57:0.0):46.0,((58:0.0,59:0.0,60:0.0,61:0.0,62:0.0,63:0.0,64:0.0,65:0.0,66:0.0,67:0.0,68:0.0,69:0.0,70:0.0,71:0.0,73:0.0):6.0,72:9.0):46.0):20.0):12.0,(((24:0.0,25:0.0,26:0.0,27:0.0,28:0.0,29:0.0,30:0.0,31:0.0,32:0.0,33:0.0,34:0.0,35:1.0,41:0.0):1.0,36:0.0,37:0.0,(38:0.0,39:0.0,40:0.0):1.0):8.0,(((((42:0.0,43:0.0):1.0,(44:0.0,45:0.0):2.0):1.0,46:2.0):2.0,47:6.0):6.0,(48:1.0,49:0.0):10.0):11.0):15.0):22.0,(53:0.0,54:0.0,55:0.0):21.0):24.0,(74:0.0,75:0.0):30.0):0.0; END;