#NEXUS [written Sun Apr 14 13:59:03 CAT 2013 by Mesquite version 2.75 (build 564) at PC-de-Mika/127.0.0.1] BEGIN TAXA; TITLE Taxa_for_Ceratocystis_fimbriata_s.l.TUBB1_analysis; DIMENSIONS NTAX=17; TAXLABELS CMW35958_Ceratocystis_zambeziensis CMW35959_Ceratocystis_zambeziensis CMW35962_Ceratocystis_zambeziensis CMW35963_Ceratocystis_zambeziensis CMW35970_Ceratocystis_thulamelensis CMW35971_Ceratocystis_thulamelensis CMW35972_Ceratocystis_thulamelensis CMW35973_Ceratocystis_thulamelensis CMW4068_Ceratocystis_albifundus CMW23825_Ceratocystis_albifundus CMW37312_Ceratocystis_albifundus CMW37313_Ceratocystis_albifundus CMW15991_Ceratocystis_tanganyicensis CMW15999_Ceratocystis_tanganyicensis CMW14276_Ceratocystis_tsitsikammensis CMW14278_Ceratocystis_tsitsikammensis CMW11164_Ceratocystis_virescens ; END; BEGIN CHARACTERS; TITLE Ceratocystis_fimbriata_s.l._TUBB1_alignments; DIMENSIONS NCHAR=559; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = N; MATRIX CMW35958_Ceratocystis_zambeziensis TTTGCTCCCCTGACTAGCCGCGGCGCTCACTCTTTCCGTGCTGTGAGCGTCCCTG--AGCTTACCCAGCAGATGTTCGATCCCAAGAACATGATGGCTG CMW35959_Ceratocystis_zambeziensis TTTGCTCCCCTGACTAGCCGCGGCGCTCACTCTTTCCGTGCTGTGAGCGTCCCTG--AGCTTACCCAGCAGATGTTCGATCCCAAGAACATGATGGCTG CMW35962_Ceratocystis_zambeziensis TTTGCTCCCCTGACTAGCCGCGGCGCTCACTCTTTCCGTGCTGTGAGCGTCCCTG--AGCTTACCCAGCAGATGTTCGATCCCAAGAACATGATGGCTG CMW35963_Ceratocystis_zambeziensis TTTGCTCCCCTGACTAGCCGCGGCGCTCACTCTTTCCGTGCTGTGAGCGTCCCTG--AGCTTACCCAGCAGATGTTCGATCCCAAGAACATGATGGCTG CMW35970_Ceratocystis_thulamelensis TTTGCTCCCCTGACTAGCCGCGGCGCTCACTCTTTCCGTGCTGTGAGCGTCCCTG--AGCTTACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTG CMW35971_Ceratocystis_thulamelensis TTTGCTCCCCTGACTAGCCGCGGCGCTCACTCTTTCCGTGCTGTGAGCGTCCCTG--AGCTTACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTG CMW35972_Ceratocystis_thulamelensis TTTGCTCCCCTGACTAGCCGCGGCGCTCACTCTTTCCGTGCTGTGAGCGTCCCTG--AGCTTACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTG CMW35973_Ceratocystis_thulamelensis TTTGCTCCCCTGACTAGCCGCGGCGCTCACTCTTTCCGTGCTGTGAGCGTCCCTG--AGCTTACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTG CMW4068_Ceratocystis_albifundus TTTGCTCTCCTGCATAGCCGCGCCGCTCACTCTTTCCGTGCTGTGAGCGTCCCTG--AGCTTACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTG CMW23825_Ceratocystis_albifundus TTTGCTCTCCTGCATAGCCGCGCCGCTCACTCTTTCCGTGCTGTGAGCGTCCCTG--AGCTTACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTG CMW37312_Ceratocystis_albifundus TTTGCTCCCCTGACTAGCCGCGGTGCTCACTCTTTCCGTGCTGTGAGCGTCCCTG--AGCTTACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTG CMW37313_Ceratocystis_albifundus TTTGCTCCCCTGACTAGCCGCGGTGCTCACTCTTTCCGTGCTGTGAGCGTCCCTG--AGCTTACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTG CMW15991_Ceratocystis_tanganyicensis TTTGCTCCCCTGACTAGCCCGGGCGCTCACTCTTTCCGTGCTGTGAGCGTCCCTA--AGCTTACCCAGCAGATGTTCGATCCCAAGAACATGATGGNTG CMW15999_Ceratocystis_tanganyicensis TTTGCTCCCCTGACTAGCCCGGGCGCTCACTCTTTCCGTGCTGTGAGCGTCCCTA--AGCTTACCCAGCAGATGTTCGATCCCAAGAACATGATGGNTG CMW14276_Ceratocystis_tsitsikammensis NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTTCCGTGCTGTGAGCGTCCCTGCAGACTTACCCAGCAGATGTTCGATCCCAAGAACATGATGGCTG CMW14278_Ceratocystis_tsitsikammensis NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTTCCGTGCTGTGAGCGTCCCTGCAGACTTACCCAGCAGATGTTCGATCCCAAGAACATGATGGCTG CMW11164_Ceratocystis_virescens TTTGCTCCCCTGACCAGTCGCGGTGCTCACTCTTTCCGCGCCGTCAGCGTGCCCG--AGCTGACCCAACAGATGTTCGACCCCAAGAACATGATGGCTG CMW35958_Ceratocystis_zambeziensis CTTCCGACTTCCGCAACGGCCGTTACCTGACCTGCTCTGCCATCTTGTACGTATACCCTTTGGAAAAATTAGCCCATTGTTGTTTTCTTCGTTCATGTA CMW35959_Ceratocystis_zambeziensis CTTCCGACTTCCGCAACGGCCGTTACCTGACCTGCTCTGCCATCTTGTACGTATACCCTTTGGAAAAATTAGCCCATTGTTGTTTTCTTCGTTCATGTA CMW35962_Ceratocystis_zambeziensis CTTCCGACTTCCGCAACGGCCGTTACCTGACCTGCTCTGCCATCTTGTACGTATACCCTTTGGAAAAATTAGCCCATTGTTGTTTTCTTCGTTCATGTA CMW35963_Ceratocystis_zambeziensis CTTCCGACTTCCGCAACGGCCGTTACCTGACCTGCTCTGCCATCTTGTACGTATACCCTTTGGAAAAATTAGCCCATTGTTGTTTTCTTCGTTCATGTA CMW35970_Ceratocystis_thulamelensis CTTCCGACTTCCGCAACGGCCGTTACCTGACCTGCTCTGCCATCTTGTACGTATACCCTTTGGAAAGATTAGCCCATTGTTGTTTTCTTCGTACATGTA CMW35971_Ceratocystis_thulamelensis CTTCCGACTTCCGCAACGGCCGTTACCTGACCTGCTCTGCCATCTTGTACGTATACCCTTTGGAAAGATTAGCCCATTGTTGTTTTCTTCGTACATGTA CMW35972_Ceratocystis_thulamelensis CTTCCGACTTCCGCAACGGCCGTTACCTGACCTGCTCTGCCATCTTGTACGTATACCCTTTGGAAAGATTAGCCCATTGTTGTTTTCTTCGTACATGTA CMW35973_Ceratocystis_thulamelensis CTTCCGACTTCCGCAACGGCCGTTACCTGACCTGCTCTGCCATCTTGTACGTATACCCTTTGGAAAGATTAGCCCATTGTTGTTTTCTTCGTACATGTA CMW4068_Ceratocystis_albifundus CTTCCGACTTCCGCAACGGCCGTTACCTGACTTGCTCTGCCATCTTGTACGTATACCCTTTGAAAAGACTAGCCCATGCTTGTTTTCTTTGTACATGTA CMW23825_Ceratocystis_albifundus CTTCCGACTTCCGCAACGGCCGTTACCTGACTTGCTCTGCCATCTTGTACGTATACCCTTTGAAAAGACTAGCCCATGCTTGTTTTCTTTGTACATGTA CMW37312_Ceratocystis_albifundus CTTCCGACTTCCGCAACGGCCGTTACCTGACTTGCTCTGCCATCTTGTACGTATACCCTTTGAAAAGACTAGCCCATGCTTGTTTTCTTTGTACATGTA CMW37313_Ceratocystis_albifundus CTTCCGACTTCCGCAACGGCCGTTACCTGACTTGCTCTGCCATCTTGTACGTATACCCTTTGAAAAGACTAGCCCATGCTTGTTTTCTTTGTACATGTA CMW15991_Ceratocystis_tanganyicensis CTTCCGACTTCCGCAACGGCCGTTACCTGACCTGCTCTGCCATCTTGTACGTATACCCTTTGGAAAAATTAGCCCATTGTTGTTTTCTTCGTACATGTA CMW15999_Ceratocystis_tanganyicensis CTTCCGACTTCCGCAACGGCCGTTACCTGACCTGCTCTGCCATCTTGTACGTATACCCTTTGGAAAAATTAGCCCATTGTTGTTTTCTTCGTACATGTA CMW14276_Ceratocystis_tsitsikammensis CTTCCGACTTCCGCAACGGCCGTTACCTGACCTGCTCTGCCATCTTGTACGTATACCCTTTGGAAAAATTAGCCCATTGTTGTTTTCTTCGTTCATGTA CMW14278_Ceratocystis_tsitsikammensis CTTCCGACTTCCGCAACGGCCGTTACCTGACCTGCTCTGCCATCTTGTACGTATACCCTTTGGAAAAATTAGCCCATTGTTGTTTTCTTCGTTCATGTA CMW11164_Ceratocystis_virescens CTTCCGATTTCCGCAACGGTCGCTACCTGACTTGCTCTGCTATCTTGTATGT------------------------------TTTTCACCAACTATATT CMW35958_Ceratocystis_zambeziensis ----TCTCTGTTGCTCATGCAACT---GTGCTTTCTATGA-CTATTTGCTAACC----CTTTTTTCTTCCCCTCTCTAATTTACAGCCGTGGTAAGGTT CMW35959_Ceratocystis_zambeziensis ----TCTCTGTTGCTCATGCAACT---GTGCTTTCTATGA-CTATTTGCTAACC----CTTTTTTCTTCCCCTCTCTAATTTACAGCCGTGGTAAGGTT CMW35962_Ceratocystis_zambeziensis ----TCTCTGTTGCTCATGCAACT---GTGCTTTCTATGA-CTATTTGCTAACC----CTTTTTTCTTCCCCTCTCTAATTTACAGCCGTGGTAAGGTT CMW35963_Ceratocystis_zambeziensis ----TCTCTGTTGCTCATGCAACT---GTGCTTTCTATGA-CTATTTGCTAACC----CTTTTTTCTTCCCCTCTCTAATTTACAGCCGTGGTAAGGTT CMW35970_Ceratocystis_thulamelensis C--CTCTCTGTTGCTCATGCAACT---GTGCTTTCTATGA-CCATTTGCTAACC----CTTTTTTCTTCCCCTCTCTACTTTACAGCCGCGGTAAGGTT CMW35971_Ceratocystis_thulamelensis C--CTCTCTGTTGCTCATGCAACT---GTGCTTTCTATGA-CCATTTGCTAACC----CTTTTTTCTTCCCCTCTCTACTTTACAGCCGCGGTAAGGTT CMW35972_Ceratocystis_thulamelensis C--CTCTCTGTTGCTCATGCAACT---GTGCTTTCTATGA-CCATTTGCTAACC----CTTTTTTCTTCCCCTCTCTACTTTACAGCCGCGGTAAGGTT CMW35973_Ceratocystis_thulamelensis C--CTCTCTGTTGCTCATGCAACT---GTGCTTTCTATGA-CCATTTGCTAACC----CTTTTTTCTTCCCCTCTCTACTTTACAGCCGCGGTAAGGTT CMW4068_Ceratocystis_albifundus C--TTCACTGTTGCTGATGCAACT---GTGATTTCTATGA-CTATTTGCTAACC----CCATTTTCTT---CTCTCTACTTTACAGCCGTGGTAAGGTT CMW23825_Ceratocystis_albifundus C--TTCACTGTTGCTGATGCAACT---GTGATTTCTATGA-CTATTTGCTAACC----CCATTTTCTT---CTCTCTACTTTACAGCCGTGGTAAGGTT CMW37312_Ceratocystis_albifundus C--TTCACTGTTGCTGATGCAACT---GTGATTTCTATGA-CTATTTGCTAACC----CCATTTTCTT---CTCTCTACTCTACAGCCGTGGTAAGGTT CMW37313_Ceratocystis_albifundus C--TTCACTGTTGCTGATGCAACT---GTGATTTCTATGA-CTATTTGCTAACC----CCATTTTCTT---CTCTCTACTCTACAGCCGTGGTAAGGTT CMW15991_Ceratocystis_tanganyicensis C--CTCTCTATTGCTCATGCAACT---GTGCTTGATATGA-CTATTTGCTAACC----CTTCTTTCTTCCCCTCTCTACTTTACAGCCGTGGTAAGGTT CMW15999_Ceratocystis_tanganyicensis C--CTCTCTATTGCTCATGCAACT---GTGCTTGATATGA-CTATTTGCTAACC----CTTCTTTCTTCCCCTCTCTACTTTACAGCCGTGGTAAGGTT CMW14276_Ceratocystis_tsitsikammensis CCTCTCTCTGTTGCTCATGCAACT---GTGCTTTCTATGA-CTATTTGCTAACC----CTTTTTTCTTCCCCTCTCTACTTTACAGCCGTGGTAAGGTT CMW14278_Ceratocystis_tsitsikammensis CCTCTCTCTGTTGCTCATGCAACT---GTGCTTTCTATGA-CTATTTGCTAACC----CTTTTTTCTTCCCCTCTCTACTTTACAGCCGTGGTAAGGTT CMW11164_Ceratocystis_virescens TGTCTATCATTAGTTTATA------------TTTGCATGG-ATCTTTGCTAACA----CCTCTTTCTTTCGT------CTTTATAGCCGTGGTAAGGTT CMW35958_Ceratocystis_zambeziensis GCCATGAAGGAGGTCGAAGACCAGATGCGCAACGTTCAGAACAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAACGTGCAGACCGCTCTGTGC CMW35959_Ceratocystis_zambeziensis GCCATGAAGGAGGTCGAAGACCAGATGCGCAACGTTCAGAACAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAACGTGCAGACCGCTCTGTGC CMW35962_Ceratocystis_zambeziensis GCCATGAAGGAGGTCGAAGACCAGATGCGCAACGTTCAGAACAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAACGTGCAGACCGCTCTGTGC CMW35963_Ceratocystis_zambeziensis GCCATGAAGGAGGTCGAAGACCAGATGCGCAACGTTCAGAACAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAACGTGCAGACCGCTCTGTGC CMW35970_Ceratocystis_thulamelensis GCCATGAAGGAGGTCGAAGACCAGATGCGCAACGTTCAGAACAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAACGTGCAGACCGCTCTGTGC CMW35971_Ceratocystis_thulamelensis GCCATGAAGGAGGTCGAAGACCAGATGCGCAACGTTCAGAACAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAACGTGCAGACCGCTCTGTGC CMW35972_Ceratocystis_thulamelensis GCCATGAAGGAGGTCGAAGACCAGATGCGCAACGTTCAGAACAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAACGTGCAGACCGCTCTGTGC CMW35973_Ceratocystis_thulamelensis GCCATGAAGGAGGTCGAAGACCAGATGCGCAACGTTCAGAACAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAACGTGCAGACCGCTCTGTGC CMW4068_Ceratocystis_albifundus GCCATGAAGGAGGTCGAAGACCAGATGCGCAACGTCCAGAACAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAACGTGCAGACCGCCCTGTGC CMW23825_Ceratocystis_albifundus GCCATGAAGGAGGTCGAAGACCAGATGCGCAACGTCCAGAACAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAACGTGCAGACCGCCCTGTGC CMW37312_Ceratocystis_albifundus GCCATGAAGGAGGTCGAAGACCAGATGCGCAACGTCCAGAACAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAACGTGCAGACCGCCCTGTGC CMW37313_Ceratocystis_albifundus GCCATGAAGGAGGTCGAAGACCAGATGCGCAACGTCCAGAACAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAACGTGCAGACCGCCCTGTGC CMW15991_Ceratocystis_tanganyicensis GCCATGAAGGAGGTCGAAGACCAGATGCGCAACGTTCAGAACAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAACGTGCAGACCGCTCTGTGC CMW15999_Ceratocystis_tanganyicensis GCCATGAAGGAGGTCGAAGACCAGATGCGCAACGTTCAGAACAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAACGTGCAGACCGCTCTGTGC CMW14276_Ceratocystis_tsitsikammensis GCCATGAAGGAGGTCGAAGACCAGATGCGCAACGTTCAGAACAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAACGTGCAGACCGCTCTGTGC CMW14278_Ceratocystis_tsitsikammensis GCCATGAAGGAGGTCGAAGACCAGATGCGCAACGTTCAGAACAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAACGTGCAGACCGCTCTGTGC CMW11164_Ceratocystis_virescens GCCATGAAGGAGGTTGAGGACCAGATGCGCAACGTCCAGAACAAGAACTCCTCTTACTTTGTTGAGTGGATCCCCAACAACGTCCAGACTGCCCTGTGC CMW35958_Ceratocystis_zambeziensis TCTATCCCCCCCCGTGGCCTCAAGATGTCATCGACCTTTGTTGGTAACTCGACGGCCATCCAGGAGTTGTTCAAGCGCATTGGCGAGCAGTTCACTGCC CMW35959_Ceratocystis_zambeziensis TCTATCCCCCCCCGTGGCCTCAAGATGTCATCGACCTTTGTTGGTAACTCGACGGCCATCCAGGAGTTGTTCAAGCGCATTGGCGAGCAGTTCACTGCC CMW35962_Ceratocystis_zambeziensis TCTATCCCCCCCCGTGGCCTCAAGATGTCATCGACCTTTGTTGGTAACTCGACGGCCATCCAGGAGTTGTTCAAGCGCATTGGCGAGCAGTTCACTGCC CMW35963_Ceratocystis_zambeziensis TCTATCCCCCCCCGTGGCCTCAAGATGTCATCGACCTTTGTTGGTAACTCGACGGCCATCCAGGAGTTGTTCAAGCGCATTGGCGAGCAGTTCACTGCC CMW35970_Ceratocystis_thulamelensis TCTATCCCCCCCCGTGGCCTCAAGATGTCATCGACCTTTGTTGGTAACTCGACGGCCATCCAGGAGTTGTTCAAGCGCATTGGCGAGCAGTTCACTGCC CMW35971_Ceratocystis_thulamelensis TCTATCCCCCCCCGTGGCCTCAAGATGTCATCGACCTTTGTTGGTAACTCGACGGCCATCCAGGAGTTGTTCAAGCGCATTGGCGAGCAGTTCACTGCC CMW35972_Ceratocystis_thulamelensis TCTATCCCCCCCCGTGGCCTCAAGATGTCATCGACCTTTGTTGGTAACTCGACGGCCATCCAGGAGTTGTTCAAGCGCATTGGCGAGCAGTTCACTGCC CMW35973_Ceratocystis_thulamelensis TCTATCCCCCCCCGTGGCCTCAAGATGTCATCGACCTTTGTTGGTAACTCGACGGCCATCCAGGAGTTGTTCAAGCGCATTGGCGAGCAGTTCACTGCC CMW4068_Ceratocystis_albifundus TCTATTCCCCCCCGTGGCCTCAAGATGTCGTCGACCTTTGTTGGTAACTCGACGGCCATCCAGGAGTTGTTCAAGCGCATTGGCGAGCAGTTCACTGCC CMW23825_Ceratocystis_albifundus TCTATTCCCCCCCGTGGCCTCAAGATGTCGTCGACCTTTGTTGGTAACTCGACGGCCATCCAGGAGTTGTTCAAGCGCATTGGCGAGCAGTTCACTGCC CMW37312_Ceratocystis_albifundus TCTATTCCCCCCCGTGGCCTCAAGATGTCGTCGACCTTTGTTGGTAACTCGACGGCCATCCAGGAGTTGTTCAAGCGCATTGGCGAGCAGTTCACTGCC CMW37313_Ceratocystis_albifundus TCTATTCCCCCCCGTGGCCTCAAGATGTCGTCGACCTTTGTTGGTAACTCGACGGCCATCCAGGAGTTGTTCAAGCGCATTGGCGAGCAGTTCACTGCC CMW15991_Ceratocystis_tanganyicensis TCTATCCCCCCCCGTGGCCTCAAGATGTCATCGACCTTTGTTGGTAACTCGACGGCCATCCAGGAGTTGTTCAAGCGCATTGGCGAGCAGTTCACTGCC CMW15999_Ceratocystis_tanganyicensis TCTATCCCCCCCCGTGGCCTCAAGATGTCATCGACCTTTGTTGGTAACTCGACGGCCATCCAGGAGTTGTTCAAGCGCATTGGCGAGCAGTTCACTGCC CMW14276_Ceratocystis_tsitsikammensis TCTATTCCCCCCCGTGGCCTCAAGATGTCATCGACCTTTGTTGGTAACTCGACGGCCATCCAGGAGTTGTTCAAGCGCATTGGCGAGCAGTTCACTGCC CMW14278_Ceratocystis_tsitsikammensis TCTATTCCCCCCCGTGGCCTCAAGATGTCATCGACCTTTGTTGGTAACTCGACGGCCATCCAGGAGTTGTTCAAGCGCATTGGCGAGCAGTTCACTGCC CMW11164_Ceratocystis_virescens TCCATTCCTCCCCGTGGCCTCAAGATGTCGTCTACCTTCGTCGGTAACTCGACTGCCATCCAGGAGCTGTTCAAGCGTATTGGCGAGCAGTTCACTGCT CMW35958_Ceratocystis_zambeziensis ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA CMW35959_Ceratocystis_zambeziensis ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA CMW35962_Ceratocystis_zambeziensis ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA CMW35963_Ceratocystis_zambeziensis ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA CMW35970_Ceratocystis_thulamelensis ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA CMW35971_Ceratocystis_thulamelensis ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA CMW35972_Ceratocystis_thulamelensis ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA CMW35973_Ceratocystis_thulamelensis ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA CMW4068_Ceratocystis_albifundus ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA CMW23825_Ceratocystis_albifundus ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA CMW37312_Ceratocystis_albifundus ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA CMW37313_Ceratocystis_albifundus ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA CMW15991_Ceratocystis_tanganyicensis ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA CMW15999_Ceratocystis_tanganyicensis ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA CMW14276_Ceratocystis_tsitsikammensis ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA CMW14278_Ceratocystis_tsitsikammensis ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA CMW11164_Ceratocystis_virescens ATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCA ; END; BEGIN TREES; Title Most_ParsimoniousTrees_from_Ceratocystis_fimbriata_s.l._TUBB1_analysis; LINK Taxa = Taxa_for_Ceratocystis_fimbriata_s.l.TUBB1_analysis; TRANSLATE 1 CMW35958_Ceratocystis_zambeziensis, 2 CMW35959_Ceratocystis_zambeziensis, 3 CMW35962_Ceratocystis_zambeziensis, 4 CMW35963_Ceratocystis_zambeziensis, 5 CMW35970_Ceratocystis_thulamelensis, 6 CMW35971_Ceratocystis_thulamelensis, 7 CMW35972_Ceratocystis_thulamelensis, 8 CMW35973_Ceratocystis_thulamelensis, 9 CMW4068_Ceratocystis_albifundus, 10 CMW23825_Ceratocystis_albifundus, 11 CMW37312_Ceratocystis_albifundus, 12 CMW37313_Ceratocystis_albifundus, 13 CMW15991_Ceratocystis_tanganyicensis, 14 CMW15999_Ceratocystis_tanganyicensis, 15 CMW14276_Ceratocystis_tsitsikammensis, 16 CMW14278_Ceratocystis_tsitsikammensis, 17 CMW11164_Ceratocystis_virescens; TREE PAUP_1 = ((((((1:0.0,2:0.0,3:0.0,4:0.0):3.0,(15:0.0,16:0.0):8.0):1.0,(13:0.0,14:0.0):7.0):2.0,(5:0.0,6:0.0,7:0.0,8:0.0):2.0):11.0,((9:0.0,10:0.0):4.0,(11:0.0,12:0.0):2.0):8.0):3.0,17:14.0):0.0; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 559; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 559; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 559; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1365940744115; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 7090491744124880798; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 3098866896816173129; mqVersion 275; checksumv 0 3 292539889 null getNumChars 559 numChars 559 getNumTaxa 17 numTaxa 17 short true bits 15 states 15 sumSquaresStatesOnly 215111.0 sumSquares 215111.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 464; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; endTell; end;