#NEXUS [written Mon May 13 11:33:09 EDT 2013 by Mesquite version 2.72 (build 528) at andrea-weeks-power-mac-g5.local/129.174.86.85] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=22; TAXLABELS Ambilobea_madagascariensis Commiphora_ankaranensis Commiphora_aprevalii Commiphora_arafy Commiphora_falcata Commiphora_franciscana Commiphora_grandifolia Commiphora_humbertii Commiphora_lamii Commiphora_lasiodisca Commiphora_mafaidoha Commiphora_mahafaliensis Commiphora_marchandii Commiphora_monstruosa Commiphora_orbicularis Commiphora_pervilleana Commiphora_simplicifolia Commiphora_sinuata Commiphora_spnov Commiphora_stellulata Commiphora_tetramera Commiphora_vezorum ; END; BEGIN CHARACTERS; TITLE Character_Matrix; LINK TAXA = Taxa; DIMENSIONS NCHAR=2021; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Ambilobea_madagascariensis ?????????ctgtgttgcttacctaccggaaggtattcgatggtct-gtttgttcctttccgccccatgccctcacgggtggtggggtggatgttaggcaagcctcgtgttcctagcatgcctcgcctagctgcgtggttgccttggcccatgaggtgttttgcccgtcctctcggatgcagaatgttatgcacgggcgggtggtctct-----cggcctccgattgcccaagc---aatgcattttgtccaacgacatgaacgactgctgcgcctatctttgagcct---gcggcctcacggctcgacggggctcatgtgggtgtcagcgtcgcgaaggaatgctacctggttgatcctgccagtagtcatatgcttgtctc?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Commiphora_ankaranensis ???????????????????????????????????????acggtctcgtttgtccctctccgcacccagccctcgcgggttgtggggcggacacgaggcaagccccgtgttcccggcaagcctcgcccagtcgcttggctgcttcggcccacggtgtgctctgcccgttctctcagatgcagaacgttacgcgcgggcacggggtcttc-----cgg-ctccgtttgcccaagc---aacgca-cctgtccctcgacgcgaacgactgccgtgcccgtc-ttgagccc---gcagcctcacggcccgtcgggcgtcatgcgggcgtcggcgtcgcgaaggaacgctacctggttgatcctgccagtagtcatatgcttgtctc????????????????????????????????tggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaattatattaccttttttcaaaaaaagaaataggaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaattttgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat----aaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaatttaagaacccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaacctgttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatatgaacatcaagtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataggaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatat------------------------ttgatataaagtataaatagaaaattcatatgtaattcacgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgacttt---ttttattaattcctttcaacaaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttattatta?????ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatccaaagatttcaat-------ttatagcattgatcattatttttgatcatcattcttttttatcttaacttatgaagatcgaaattcagatccaagagacaaaaaattccaac-ttttatttttttatctaatcgattcgagtttctatattag---ttttttttctattattctat------agattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaatacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggaacaataccggtattgctccgttattttcaaaaactcgtatacacaaagaacgaaatcttatccatttgtagatggagcttcaat Commiphora_aprevalii ttcggtatcctgtgttgcttacctatcgaaaggaatcagacggtctcatttgtccccttccgcacccag-cctcgcaggttgtagggcagacatgaggcatgccccgtgctcccggcaagcctcgtccagtcgcttggctgcttcggccgacggtgtgctttgttcgttctctcggatgcagaacgttacgtgcgggcgtggggtcttc-----tgg-ctctgtttgcccaagc---aacgca-tctgtccctcgacgcgaatgactgtcgtgcccgtc-ttgagccc---gtggcctcacggcccgtcaggcgtcatgcgggcatcggcgtcgcgaaggagctctacctggttgatcctgccagtagtcatatgctt?????????????????????????????????????tggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaattatattaccttttttcaaaaaaagaaataggaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaattttgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat----aaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaatttaagaacccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatat---------gtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataagaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatat------------------------ttgatataaagtataaatagaaaattcatatgtaattcacgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgactttt--ttttattaatccctttcaacaaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttattatta?????????ttggctacatccgcccctccactatttcgatttaaataaaaaaatccaaagatttcaatttctagcttctagcattgatcattatttttgattatcattcttttttatcttaacttatgaagatcgaaattcagatccaagagacaaaaaattccaac--tttttttttttatctaatcgattcgagtttctatattag---ttttttttctattattctat------atattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaatacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccgaaatcttatccatttgtagatggagcttcaat Commiphora_arafy ttcggtatcctgtgttgcttacctatcgaaaggaatccgacggtYtcgtttgtccctctccgcccccggccctcgcgggttgcggggtggacatcaggcacgccccgtgttccYggcaagcctcgcccagccgcttggttgcctcggcccacggtgtgctctgcccgttctctcggatgcagaacgttacgtgcgggcgtggggtctgc-----cga-Ytccgtttgccctcgcaaaaacgca-attgtccctcgacgcgaacgactgYcgtgcccgtc-ttgagccc---gcggcctcacggcccgtcgggtctcatgcgggcgtcggcgtcgcgaaggaatgctacctggttgatcctgccagtagtcatatgcttgtctc????????????????????????????????tggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaatcatattaccttttttcaaaaaaagaaatagaaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaatttcgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatacctattcaaattgatatctataggacctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat----aaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaattt------ccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatatgaacatcaagtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataagaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatatttgatataaagtataaat------ttgatataaagtataaatagaaaatacttat--------tgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgacttttttttttattaatcccttt---caaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttattat???????ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatcaaaagatttcaat-------ttctagcattgatcattatttttgatcatcattcttttttatcttaacttatgaagatcgaaattcagatccaagaggcagaaaattccaac-ttttatctttttatctaatcgattcgagtttctatattag---ttttttttctattattctatatattcatattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaagacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaaaaccggtattgctccgttattttcaaaaactcgtatacacaaagaccaaaatcttatccatttgtagatggagcttcaat Commiphora_falcata ttcggtatcctgtgttgcttacctatggaaaggaatccgacggtctcgtttgtccctctccgcccccggccctcgcgggttgtggggcggacacgaggcacgccccgtgctcccggcaagcctcgcccagtcgcttggttgcttcggcccacggtgcgctttgcccgttctctcggatgcagaacgttacgcgcgggcgtggggtcttt-----cgg-ctctgtttgcccaagc---aacgca-tctgtccctcgacgcgaacgactgtcgtgcccgtc-ttgagccc---gtggcctcacggtccgtcgggcgtcatgcgggcgtcggcgtcgcgaaggaacgctacctggttgatcctgccagtagtcatatgcttgtctc???????????????????????????????ttggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaattatattaccttttttcaaaaaaagaaataggaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaattttgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat----aaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaatttaagaacccttacctaattaaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatat---------gtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataagaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatat------------------------ttgatataaagtataaatagaaaattcatatgtaattcacgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgactttt--ttttattaatccctttcaacaaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttattatta?????ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatccaaagatttcaatttctagcttctagcattgatcattatttttgattatcattcttttttatcttaacttatgaagatcgaaattcagatccaagagacaaaaaattccaac----tttttttttatctaatcgattcgagtttctatattag---ttttttttctattattctat------atattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaatacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccgaaatcttatccatttgtagatggagcttcaat Commiphora_franciscana ???????????????????????????????????????acggtctcgttcgtccctctccgcccccggcccttgcgggctgcggggtggacatcaggcacgccccgtgttcccggcatgcctcgcccagtcgcttggYtgcctcggcccacggtgtgcttcgcccgttctctcggatgcagaacgttaggcgcgggcgtggggtctgt-----cgg-ctccgtttgccctcgc---aacgca-attgtccctcgacgcgaacgactgccgtgcccgtc-ttgagccc---gcggcctcacggcccgtcgggtctcatgcgggcgtcggcgtcgcgaaggaacgctacc??????????????????????????????????????????????????????????????????tggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaatcatattaccttttttcaaaaaaagaaatagaaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaatttcgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat--aaaaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaattt------ccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatatgaacatcaagtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataaaaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatatttgatataaagtataaat------ttgatataaagtataaatagaaaatacttat--------tgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgacttttttttttattaatcccttt---caaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttatta????????ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatcaaaagatttcaat-------ttctagcattgatcattatttttgatcatcattcttttttatcttaacttatgaagatcgaaattcagatccaagaggcagaaaattccaac-ttttatctttttatctaatcgattcgagtttctatattag---ttttttttctattattctatatattcatattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaagacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccaaaatcttatccatttgtagatggagcttcaat Commiphora_grandifolia ???????????????????????????????????????acggtctcgtctgtccctctccgcacccagccctcgcgggttgtggggcggacacgaggcacgccccgtgctccctgcaagcctcgcccagtcgcttggctgcttcggcccacggtgtgctccgcccgttctctcggatgcagaacgttacgcgcgggcgtggggtcttc-----cgg-Ycccgtttgcccgagc---aactca-tatgtccctcgacgcgaacgactgccgtgcccgtc-ttgagccc---gcggcctcacggcccgtcgggcgtcatgcgggcgtcggcgtcgcgaaggaacgctacctggttgatcctgccagtagtcatatgcttgtctc????????????????????????????????????????gaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaattatattaccttttttcaaaaaaagaaataggaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaattttgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat-----aaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaatttaagaacccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatatgaacatcaagtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataagaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatat------------------------ttgatataaagtataaatagaaaattcatatgtaattcacgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt-----aatacctgactttt--ttttattaatccctttcaacaaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttattatta?????ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatccaaagatttcaat-------ttctagcattgatcattatttttgatcatcattcttttttatcttaacttatgaagatcgaaattcagatccaagagacaaaaaattccaac-ttttatttttttatttaatcgattcgagtttctatattag---ttttttttctattattctat------atattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaatacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccgaaatcttatccatttgtagatggagcttcaat Commiphora_humbertii ?????????????????????????????????????cgacggtctcgttcgtccctctccgcccccggccctcgcgggttgcggggtggacatcaggcacgccccgtgttcccggcaagcctcgcccagtcgcttggctgcctcggcccacggtgtgcttcgcccgttctctcggatgcggaacgttaSgcgcgggcgtggggtctgt-----cgg-ctccgtttgccctcgc---aacgca-attgtccctcgacgcgaacgactgtcgtgcccgtc-ttgagccc---gcggcctcacggcccgtcgggtctcatgcgggcgtcggcgtcgcgaaggaacgctacc??????????????????????????????????????????????????????gaatacgttttttggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaatcatattactttttttcaaaaaaagaaatagaaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaatttcgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat---aaaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaattt------ccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatatgaacatcaagtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataaaaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatatttgatataaagtataaat------ttgatataaagtataaatagaaaatacttat--------tgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgacttttttttttattaatcccttt---caaaagagataacagccggtgaattagaaacaattaattaattcagaa-taaaaaaaaaaagtt????????????ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatcaaaagatttcaat-------ttctagcattgatcattatttttgatcatcattcttttttatcttaacttatgaagatcgaaattcagatccaagaggcagaaaattccaac-ttttatctttttatctaatcgattcgagtttctatattag---ttttttttctattattctatatattcatattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaagacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccaaaatcttatccatttgtagatggagcttcaat Commiphora_lamii ttcggtatcctgtgttgcttacctatcgaaaggaatctgacggtctcgttcgtccctctccgcacccagccctcgcgggttgtggggcggacacgaggcacgccccgtgctcccggcaagcctcgcccagtcgcttggctgcttcggcccacggtgtgctctgcccgttctctcggatgcagaacgttacgcgcgggcgtggggccttc-----tgg-ctctgtttgcccgagc---aactca-tctgtccctcgacgcgaacgactgccgtgcccgtc-ttgagccc---gcggcctcacggcccgtcgggcgtcatgcgggcgtcggcgtcgcgaaggaacgctacctggttgatcctgccagtagtcatatgcttgtctc????????????????????????????????tggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaattatattaccttttttcaaaaaaagaaataggaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaattttgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat---aaaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaatttaagaacccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatatgaacatcaagtacttttttttggtgtatgtaattctttagtcttgatctctgtccctaaattattgtaataaggaataagaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatat------------------------ttgatataaagtataaatagaaaattcatatgtaattcacgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgactttt--ttttattaatccctttcaacaaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttattatta?????ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatccaaagatttcaat-------ttctagcattgatcattatttttgatcatcattcttttttatcttaacttatgaagatcgaaattcagatccaagagacaaaaaattccaac-ttttctttttttatctaatcgattcgagtttctatattag---ttttttttctattattctat------atattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaatacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccgaaatcttatccatttgtagatggagcttcaat Commiphora_lasiodisca ?????????????????????????????????????cgacggtttagtttgtccctctccgccccatgccctcgcgggttgtggggtggacatcaggcacgccccgtgttcccggcaagccatgcccagctgcttggctgccttggcccattgggtgctctgcccgtgctctcggatgcagaatgtYgtgcgcgggtgtggggtctgt-----tgg-ctccgtttgcccaagc---aatgca-tctgtccatcgacacgaacgactgtcgtgcccgtc-ttgagcccgcagcagcctcagggcctgttgggtctcatacgggcgtcggcgtcgcgaaggaacgctacc??????????????????????????????????ttttttccaaatatttttacgaattcgttttttggagatagaagtacgtttttttggaactgccattcacaaaagaaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttcattttgactattcatttgattatttgtctattgattctctaaattatattaccttttttcaaaaaaagaaatagaaatatg--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgaaatttgaatttgctacatcttcatcaaaatcttacttaatatat------------------------ttgatataaagtataaatagaaaatacttat--------tgatttttatttttcgctaggagcttagttatatcattggactactttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctctttaagtttttttttaataaatacctgacttttt-ttttattaatcccttt---caaaagagataagagccggtgaatcagaaacaattaattaattcagaattaaaaaaaaaaagttattattattatt????ttggctacatccgcccctacattatttcgatttaaataaataaatccaaggatttcaat-------ttctagcattgatcattatttttgatcatcattcttttttatcttaacttatgaagatcgaaattcagatccaagaggcagaaaattccaac-ttttatctttttatctaatcgattcgagtttctatattcgtttttttttttctattattctat------atattcgattagtatataattattagtatataaggaagggataaatataaataaaaggcataaaaatacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggaacaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccgaaatcttatccatttgtagatggagcttcaat Commiphora_mafaidoha ttcggtatcctgtgttgcttacctatcgaaaggaatccgacggtcccgttcgtccctctccgcccctggccctcgcgggttgcggggtggacatcgggcacgccccgtgttcccggcaggcctcgcccagtcgcttggctgcctcggcccacggtgtgctccgcccgttctctcggatgcagaacgttaggcgcgggcgtggggtcttt-----cgg-ctctgtttgccctcgc---aacgca-atcgtccctcgacgcgaacgactgccgtgcccgtc-ttgagccc---gcggcctcacggcccgtcgggtctcatgcgggtgtcggcgtcgcgaaggaacgctacctggttgatcctgccagtagtcatatgctt?????????????????????????????????????tggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaatcatattaccttttttcaaaaaaagaaatagaaatatgtgaaaatagaataaaatattattagaacaaaaaagaaaaacaatagaaaaataatatgatataggattttttcaatttcgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat--aaaaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaattt------ccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatatgaacatcaagtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataaaaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatatttgatataaagtataaat------ttgatataaagtataaatagaaaatacttat--------tgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgacttttttttttattaatcccttt---caaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttat??????????ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatcaaaagatttcaat-------ttctagcattgatcattatttttgatcatcattcttttttatcttaacttatgaagatcgaaattcagatccaagaggcagaaaattccaac-ttttatctttttatctaatcgattcgagtttctatattcg---ttttttttctattattctatatattcatattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaagacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccaaaatcttatccatttgtagatggagcttcaat Commiphora_mahafaliensis ttcggtatcctgtgttgcttacctatcgaaaggaaaccgacggtctcgttcgtccctctccgcccccggccctcgcgggttgcggggtggacatcaggcacgccccgtgttcccggcaagcctcgcgcagtcgcttggctgcctcggcccacggtgtgctccgcccgttctctcggatgcagaacgttaggcgcgggcgtggggtctgt-----cgg-ctccgtttgccctcgc---aacgca-attgtccctcgacgcgaacgactgtcgtgcccgtc-ttgagccc---gcggcctcacggcccgtcgggtctcatgcgggcgtcggcgtcgcgaaggaacgctacctggttgatcctgccagtagtcatatgcttgtctc???tttccaaatatttttacgaatacgttttttggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaatcatattaccttttttcaaaaaaagaaatagaaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaatttcgattcccatacaatagaatatcggggaaaggataattcgtatttcgaagttcttgttttgttattggtggtccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat---aaaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaatttaagaacccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatatgaacatcaagtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataagaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatatttgatataaagtataaat------ttgatataaagtataaatagaaaatacttat--------tgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatattttggaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgacttttt-ttttattaatcccttt---caaaagagataacagccggtgaattagaaacaattaattaattcagaa-taaaaaaaaaaaaaaatt?????????ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatccaaagatttcaat-------ttctagcattgatcattatttttgatcatcattcttttttatcttaacttatgaagatcgaaattcagatccaagaggcagaaaattccaac-ttttatctttttatctaatcgattcgagtttctatattag---ttttttttctattattctatatattcatattcgattagtttctaattattagtatataaggaagggac-----taaatcaaaggcataaaaagacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccaaaatcttatccatttgtagatggagcttcaat Commiphora_marchandii ttcggtatcctgtgttgcttacctatcgaaaggaatccgacggtctcgtttgtccctctccgcccccagccctcgcgggttgtggggcggacacgaggcacgccccgtgctcccggcaagcctcgcccagtcgcttggttgcttcggcccacggtgtgctctgcccgttctctcggatgcagaacgttacgcgcgggcgtggggccttc-----cgg-ctctgtttgcccaagc---aacgca-tctgtccctcgacacgaacgactgccgtgcccgtc-ttgagccc---gcggcctcacggcccgtcgggcgtcatgcgggcgtcggcgtcgcgaaggaatgctacctggttgatcctgccagtagtcatatgcttgtc??????????????????????????????????tggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaattatattaccttttttcaaaaaaagaaataggaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaattttgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat----aaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaatttaagaacccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatat---------gtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataagaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatat------------------------ttgatataaagtataaatagaaaattcatatgtaattcacgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaaatatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgactttt--ttttattaatccctttcaacaaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttattatta?????????ttggctacatccgcccctccactatttcgatttaaataaaaaaatccaaagatttcaatttctagcttctagcattgatcattatttttgattatcattcttttttatcttaacttatgaagatcgaaattcagatccaagagacaaaaaattccaactttttttttttttatctaatcgattcgagtttctatattag---ttttttttctattattctat------atattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaatacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccgaaatcttatccatttgtagatggagcttcaat Commiphora_monstruosa ttcggtatcctgtgttgcttacctatggaaaggaatccgacggtcccgttcgtccctctccgcccccggccctcgcgggctgcggggtggacatcaggcacgccccgtgttcctggcaagcctcgcccaaccgcttggctgcctcggcccacggtgtgctctgcccgttctctcggatgcagaacgttacgcgcgggcgcggggtctgt-----cgg-ctccgtttgccctcgc---aacgca-attgtccctcgacgcgaacgactgtcgtgcccgtctttgagccc---gcggcctcacggcccgtcgggtctcatgcgggcgtcggcgtcgcgaaggaacgctacctggttgatcctgccagtagtcatatgcttg????????????????????????????????????tggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaatcatattaccttttttcaaaaaaagaaatagaaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaatttcgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgataaaaaaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaattt------ccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatatgaacatcaagtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataaaaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatatttgatataaagtataaat------ttgatataaagtataaatagaaaatacttat--------tgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgactttttYttttattaatcccttt---caaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttatta????????ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatcaaaagatttcaat-------ttctagcattgatcattatttttgatcatcattcttttttatcttaacttatgaagatcgaaattcagatccaagaggcagaaaattccaac-ttttatctttttatctaatcgattcgagtttctatattag--tttttttttctattattctatatattcatattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaagacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccaaaatcttatccatttgtagatggagcttcaat Commiphora_orbicularis ??????????????????????????????????????????????????????????????cccccggccctcgcgggttgcggggtggacatcgggcacgccccgtgttcccggcaagcctcgcccaStcgcttggctgcctcggcccacggtgtgctccgcccgttctctcggatgcagaacgttacgcgcgggcgcggggtctgt-----cgg-ctccgtttgccctcgc---aacgca-attgtccctagacgcgaacgactgYcgtgcccgtcttcgagccc---gcggcctcacggcccgtcgggtctcgtgcgggcgtcggcgtcgcgaaggaacgctacc??????????????????????????????????????????????????????????????????tggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaatcatattaccttttttcaaaaaaagaaatagaaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaatttcgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtgatccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat--aaaaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaattt------ccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatatgaacatcaagtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataagaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatatttgatataaagtataaatttgatattgatataaagtataaatagaaaatacttat--------tgattttgatttttcactagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgacttttttttttattaatcccttt---caaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttattat???????ccacttggctacatccgcccctccactatttcaatttaaataaaaaaatcaaaagatttcaat-------ttctagcattgatcattatttttgatcatcattcttttttatcttaacttatgaagatcgaaattcagatccaagaggcagaaaattccaac-ttttatctttttatctaatcgattcgagtttctatattag---ttttttttctattattctatatattcatattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaagacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccaaaatcttatccatttgtagatggagcttcaat Commiphora_pervilleana ttcggtatcctgtgttgcttacctatcgaaaggaatccgacggtctcgcttgtccccctccgcccccagccctcgcgggttgtggggcggacacgaggcacgccccgtgctcccggcaagcctcgccaagtcgcttggctgcttcggcccacggtgtgctctgcccgttctctcggatgcagaacgttacgcgcgggcgtggggtcttc-----cgg-ctctgtttgcccaagcaacaacgca-tctgtccctcgacgcgaacgactgccgtgcccgtc-ttgagccc---gcggcctcacggcccgtcgggcgtcatgcgggcgtcggcgtcgcgaaggaacgctacctggttgatcctgccagtagtcatatgcttgtctc????????????????????????????????tggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaattatattaccttttttcaaaaaaagaaataggaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaattttgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatagaaatcaaattgcttgaagttgat---aaaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaatttaagaacccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatatgaacatcaagtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataagaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatat------------------------ttgatataaagtataaatagaaaattcatatgtaattcacgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattcgatttaagtttttttt-----aatacctgactttt--ttttattaatccctttcaacaaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttattatta?????ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatccaaagatttcaat-------ttctagcattgatcattatttttgatcatcattcttt--------------tgaagatcgaaattcagatccaagagacaaaaaattccaac-ttttatttttttatctaatcgattcgagtttctatattag--tttttttttctattattctat------atattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaatacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaacgactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccgaaatcttatccatttgtagatggagcttcaat Commiphora_simplicifolia ttcggtatcctgtgttgcttacctatcgaaaggaatgcgatggtcccgttcgtccctctccgcccccagccctcgcgggttgcggggtggacgataggcacgccccgtgttcctggcaagcctcgcccaKtcgcttggctgcctcggcccatggtgtgttatgcccgttctctcggatgcggaacgttacgcacgggcgtggggtctgttacgacaggctccgttcgcccgagc---aacgcattttgtccctagacgcgaacgactgccgtgcccgtc-tcgagctc---gcggcttcacggcccgtcgggtgtcgtgcgggcgtcggcgtcgcgaaggaacgctacctggttgatcctgccagtagtcatatgcttgtctc????????????????????????????????tggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgattattcatttgattatttgtctagtgattctctaaattatattaccctttttcaaaaaaagaaatagaaatatgtgaaaatagactaaaatattattagaacaaaaaataaaaacaatagaaaaatactgtgatataggattttttcaatttcgattccgatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat--aaaaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaatttaagaacccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagctcttttttagtggttaaagttatgggccagcctatgatttatatgaacatcaagtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataagaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatat------------------------ttgatataaagtataaatagaaaatacttat--------tgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgacttttt-ttttattaatccctttcaacaaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttatta????????ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatccaaagatttaaat-------ttctagcattgatcattatttttgatcatcattcttttttatcttaacttatgaagatcgaaattcagatccaagagacagaaaattccaac-ttttatctttttatctaatcgattcgagtttctatattag---ttttttttctattattccat------atattcgattagtttctaattattagtatataaggaagggac-----taaatcaaaggcataaaaatacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccgaaatcttatccatttgtagatggagcttcaat Commiphora_sinuata ttcggtatcctgtgttgcttacctatcgaaaggaatccgacggtctcgttcgtccctctccgcccccggccctcgcgggttgcggggtggacatcaggcacgccccgtgttcccggcaagcctcgcccagtcgcttggctgcctcggcccacggtgtgctccgcccgttctctcggatgcagaacgttaggcgcgggcgtggggtctgt-----cgg-ctccgtttgccctcgc---aacgca-attgtccctcgacgcgaacgactgtcgtgcccgtc-ttgagccc---gcggcctcacggcccgtcgggtctcatgcgggcgtcggcgtcgcgaaggaacgctacctggttgatcctgccagtagtcatatgctt?????????????????????????????????????tggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaatcatattaccttttttcaaaaaaagaaatagaaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaatttcgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat----aaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaattt------ccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatatgaacatcaagtacttttttttgc----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataaaaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatatttgatataaagtataaat------ttgatataaagtataaatagaaaatacttat--------tgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgacttttttttttattaatcccttt---caaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttattat???????ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatcaaaagatttcaat-------ttctagcattgatcattatttttgatcatcattcttttttatcttaacttatgaagatcgaaattcagatccaagaggcagaaaattccaac-ttttatctttttatctaatcgattcgagtttctatattag---ttttttttctattattctatatattcatattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaagacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccaaaatcttatccatttgtagatggagcttcaat Commiphora_spnov ttcggtatcctgtgttgcttacctatcgaaaggaatccSaYggtctcgttcgtccctctccgcccccggccctYgcgggYtgYggggtggacatcaggcacgccccgtgttcccggcaWgcctcgcccagtcgcttggctgcctcggcccacggtgtgctYcgcccgttctctcggatgcagaacgttaggcgcgggcgtggggtctgt-----cgg-ctccgtttgccctcgc---aacgca-attgtccctcgacRcgaacgactgccgtgcccgtc-ttgagccc---gcggcctcacggcccgtcgggtctcatgcgggcgtcggcgtcgcgaaggaacgctacctggttgatcctgccagtagtcatatgcttg????????????????????????????????????tggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaatcatattaccttttttcaaaaaaagaaatagaaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaatttcgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat---aaaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaattt------ccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatatgaacatcaagtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataaaaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatatttgatataaagtataaat------ttgatataaagtataaatagaaaatacttat--------tgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgactttttKttttattaatcccttt---caaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttattat???????ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatcaaaagatttcaat-------ttctagcattgatcattatttttgatcatcattcttttttatcttaacttatgaagatcgaaattcagatccaagaggcagaaaattccaac-ttttatctttttatctaatcgattcgagtttctatattag---ttttttttctattattctatatattcatattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaagacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccaaaatcttatccatttgtagatggagcttcaat Commiphora_stellulata ttcggtatcctgtgttgcttacctatcgaaaggaatccgacgRtctcRtttgtccctctcYgcacccagccctcRcgggttRtggagtagacatgaggcaYgccccgtgYtcccggcaagcctYgcccagtYKYttRgctgcttcggcccacggtgtgctctgcYcgttctctcggatgcagaacgttacgcRcgggYgtggggtcttc-----cgg-ctctgtttRYccaagc---aacgca-tctgtccctcgacgcgaaYgactgccRtgccYgtc-ttgagccc---gcggcctcacggcccgtcgggcRtcatRcgRgcgtcRRcgtYgcgaWggaaYgctacctggttgatcctgccagtagtcatatgcttg?????????????????????????????????????ggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaattatattaccttttttcaaaaaaagaaataggaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaattttgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtgatccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat----aaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaatttaagaacccttacctaat----------tttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatatgaacatcaagtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataagaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatat------------------------ttgatataaagtataaatagaaaattcatatgtaattcacgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---ttaatacctgactttt--ttttattaatccctttcaacaaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttattattat????ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatccaaagatttcaat-------ttctagcattgatcattatttttgatcatcattcttttttatcttaacttatgaagatcgaaattcagatccaagagacaaaaaattccaac-ttttatttttttatctaatcgattcgagtttctatattag---ttttttttctattattctat------atattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaatacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccgaaatcttatccatttgtagatggagcttcaat Commiphora_tetramera ttcggtatcctgtgttgcttacctatcgaaaggaatccgacggtttcgttcgtccctctccgcccccggccctcgcgggttgcggggtggacatcaggcacgccccgtgttcccggcaagcctcgcccagccgcttggttgcctcggcccacggtgtgctctgcccgttctctcggatgcagaacgttacgcgtgggcgtggggtctgt-----cga-ctccgtttgccctcgcaaaaacgca-atYgtccctcgacgcgaacgactgccgtgcccgtc-ttgagccc---gcggcctcacggcccgtcgggtctcatgcgggcgtcggcgtcgcgaaggaatgctacctggttgatcctgccagtagtcatatgcttgtctc????????????????????????????????tggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaatcatattaccttttttcaaaaaaagaaatagaaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaatttcgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatacctattcaaattgatatctataggacctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat---aaaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaattt------ccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatatgaacatcaagtacttttttttgg----Kgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataagaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatatttgatataaagtataaat------ttgatataaagtataaatagaaaatacttat--------tgattttgatttttcactagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgacttttttttttattaatcccttt---caaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagtt?tta????????ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatcaaaagatttcaat-------ttctagcattgatcattatttttgatcatcattcttttttatcttaacttatgaagatcgaaattcagatccaagaggcagaaaattccaac-ttttatctttttatctaatcgattcgagtttctatattag---ttttttttctattattctatatattcatattcgattattttataattattagtatataaggaagggac-----taaatcaaaggcataaaRRgacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccaaaatcttatccatttgtagatggagcttcaat Commiphora_vezorum ttcggtatcctgtgttgcttacctatcgaaaggaatccgacggtctcgtttgtccctctccgcccccggccctcgcgggttgtggggcggacacgaggcacgccccgtgctcccggcaagcctcgcccagtcgcttggctgcttcggcccacggtgtgctctgcccgttctctcggatgcagaacgttacgtgcgggcgtggggtcttc-----cgg-ctctgtttgcccaagc---aacgca-tctgtccctcgacgcgaacgactgtcgtgcccgtc-ttgagccc---gcggcctcacggcccgtcgggcgtcatgcgggcgtcggcgtcgccaaggaacgctacctggttgatcctgccagtagtcatatgcttgtctc????????????????????gaatacgttttttggagatagaagtacgtttttttggaactgccattcacaaaataaaaggttattcattgctaaaattggatgtcaaagacatctattgtttaaaacaaatcatttttgattttgactattcatttgattatttgtctattgattctctaaattatattaccttttttcaaaaaaagaaataggaatatgtgaaaatagaataaaatattattagaacaaaaaataaaaacaatagaaaaataatatgatataggattttttcaattttgattcccatacaatataatatcggggaaaggataattcgtatttcgaagttc-----ttgttattggtggtccctttaatatccctattcaaattgatatctataggatctattatgccatataatataaatctaatattaatataaatcaaattgcttgaagttgat----aaaaaaaaaacaaaagcctttctgtttctatctctgtctattttcggcatgctacatttatccatgaaaaatacatcgaccaaatttaagaacccttacctaattcaaaaaaactttaatctttttttctagtaatcgattcttaaatgtcatttattgtaatggaagacaatcaaccagttccgaaatgataattaatgattctgaataaacaaactaaaatacctagttcttttttagtggttaaagttatgggccagcctatgatttatat---------gtacttttttttgg----tgtaattctttagtcttgatctatgtccctaaattattgtaataaggaataagaattgaaatttgaattttctacatcttcatcaaaatcttacttaatatat------------------------ttgatataaagtataaatagaaaattcatatgtaattcacgattttgatttttcgctagtagcttagttatatcatttgactgctttgaactttgaatatttttgaagtatttgggaaagattcaaaataactacgaatagcaaattctatttaagtttttttt---t-aatacctgactttt--ttttattaatccctttcaacaaaagagataacagccggtgaattagaaacaattaattaattcagaa-t--aaaaaaaaagttattattatt???ccacttggctacatccgcccctccactatttcgatttaaataaaaaaatccaaagatttcaatttctagcttctagcattgatcattatttttgattatcattcttttttatcttaacttatgaagatcgaaattcagatccaagagacaaaaaattccaac---ttttttttttatctaatcgattcgagtttctatattag---ttttttttctattattctat------atattcgattagtttataattattagtatataaggaagggac-----taaatcaaaggcataaaaatacttttgttttgttgaaaacaaagatatggaaagaaaaaagtactaaagaaaaactactaaatagcgataacggagcaataccggtattgctccgttattttcaaaaactcgtatacacaaagaccgaaatcttatccatttgtagatggagcttcaat ; END; BEGIN TAXA; TITLE Taxa3; DIMENSIONS NTAX=22; TAXLABELS Commiphora_lasiodisca Commiphora_tetramera Commiphora_arafy Commiphora_orbicularis Commiphora_monstruosa Commiphora_spnov Commiphora_franciscana Commiphora_mafaidoha Commiphora_humbertii Commiphora_sinuata Commiphora_mahafaliensis Commiphora_pervilleana Commiphora_marchandii Commiphora_vezorum Commiphora_falcata Commiphora_aprevalii Commiphora_stellulata Commiphora_ankaranensis Commiphora_lamii Commiphora_grandifolia Commiphora_simplicifolia Ambilobea_madagascariensis ; END; BEGIN TREES; Title 'Trees from "Maximum_Clade_Credibility_Tree_Final.nex"'; LINK Taxa = Taxa3; TRANSLATE 1 Commiphora_lasiodisca, 2 Commiphora_tetramera, 3 Commiphora_arafy, 4 Commiphora_orbicularis, 5 Commiphora_monstruosa, 6 Commiphora_spnov, 7 Commiphora_franciscana, 8 Commiphora_mafaidoha, 9 Commiphora_humbertii, 10 Commiphora_sinuata, 11 Commiphora_mahafaliensis, 12 Commiphora_pervilleana, 13 Commiphora_marchandii, 14 Commiphora_vezorum, 15 Commiphora_falcata, 16 Commiphora_aprevalii, 17 Commiphora_stellulata, 18 Commiphora_ankaranensis, 19 Commiphora_lamii, 20 Commiphora_grandifolia, 21 Commiphora_simplicifolia, 22 Ambilobea_madagascariensis; TREE 'Commiphora_Maximum_Clade_Credibility_Tree' = (1:0.023814000000000002,(((((2:0.002687999999999996,3:0.0027764999999999943):0.004310999999999999,4:0.006140499999999997):7.46500000000011E-4,(5:0.004799499999999998,((((6:5.3499999999997994E-5,7:0.0015854999999999966):0.0016725000000000073,8:0.006212499999999999):6.224999999999981E-4,9:0.0022830000000000003):0.001006,10:0.0018255000000000042):0.0010319999999999982):0.0018895000000000092):8.37499999999991E-4,11:0.007240499999999997):0.0061440000000000106,(((12:0.003877499999999999,(13:0.003662000000000009,((14:0.0010205000000000075,15:0.004564000000000002):0.0012939999999999965,16:0.016863499999999997):0.0013390000000000069):0.0018474999999999915):0.0015529999999999988,(17:0.0022680000000000027,(18:0.0089745,(19:0.0037704999999999926,20:0.004865499999999998):0.0013205000000000022):3.670000000000062E-4):0.0021964999999999936):0.012248499999999999,21:0.020290999999999993):0.002471000000000015):0.02087499999999999,22:0.058921); END; BEGIN TAXA; TITLE Taxa2; DIMENSIONS NTAX=22; TAXLABELS Commiphora_lasiodisca Commiphora_tetramera Commiphora_arafy Commiphora_orbicularis Commiphora_monstruosa Commiphora_spnov Commiphora_franciscana Commiphora_mafaidoha Commiphora_humbertii Commiphora_sinuata Commiphora_mahafaliensis Commiphora_pervilleana Commiphora_marchandii Commiphora_vezorum Commiphora_falcata Commiphora_aprevalii Commiphora_stellulata Commiphora_ankaranensis Commiphora_lamii Commiphora_grandifolia Commiphora_simplicifolia Ambilobea_madagascariensis ; END; BEGIN TAXA; TITLE Taxa4; DIMENSIONS NTAX=22; TAXLABELS Ambilobea_madagascariensis Commiphora_lasiodisca Commiphora_vezorum Commiphora_aprevalii Commiphora_falcata Commiphora_marchandii Commiphora_ankaranensis Commiphora_lamii Commiphora_grandifolia Commiphora_stellulata Commiphora_pervilleana Commiphora_simplicifolia Commiphora_arafy Commiphora_tetramera Commiphora_mahafaliensis Commiphora_humbertii Commiphora_mafaidoha Commiphora_franciscana Commiphora_spnov Commiphora_sinuata Commiphora_monstruosa Commiphora_orbicularis ; END; BEGIN TREES; Title 'Trees from "Bayes_MajRule_Consensus_Final.nex"'; LINK Taxa = Taxa4; TRANSLATE 1 Ambilobea_madagascariensis, 2 Commiphora_lasiodisca, 3 Commiphora_vezorum, 4 Commiphora_aprevalii, 5 Commiphora_falcata, 6 Commiphora_marchandii, 7 Commiphora_ankaranensis, 8 Commiphora_lamii, 9 Commiphora_grandifolia, 10 Commiphora_stellulata, 11 Commiphora_pervilleana, 12 Commiphora_simplicifolia, 13 Commiphora_arafy, 14 Commiphora_tetramera, 15 Commiphora_mahafaliensis, 16 Commiphora_humbertii, 17 Commiphora_mafaidoha, 18 Commiphora_franciscana, 19 Commiphora_spnov, 20 Commiphora_sinuata, 21 Commiphora_monstruosa, 22 Commiphora_orbicularis; TREE 'Commiphora_Bayes_Majority_Rule_Consensus' = 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CHARSET ETS = 1 - 383; CHARSET 'ndhF-rpl32' = 384 - 1493; CHARSET 'psbA-trnH' = 1494 - 2021; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS; TYPESET * UNTITLED = unord: 1 - 2021; END; BEGIN CODONS; CODONPOSSET * UNTITLED = N: 1- 2021 ; CODONPOSSET CodonPositions = N: 1- 2021 ; CODESET * UNTITLED = universal: 1 - 2021; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 2021; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1368459189539; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 7552900335929230069; setID 1 5807117432802211374; tell It; attachments ; endTell; setID 2 1524547846631877746; setID 3 3867241481151757061; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 1313449396057576915; checksumv 0 2 2707567298 null getNumChars 2021 numChars 2021 getNumTaxa 22 numTaxa 22 short true bits 3458764513820540943 states 15 sumSquaresStatesOnly 1015777.0 sumSquares 3.0183484990607254E21 NumFiles 1 NumMatrices 1; endTell; getWindow; tell It; suppress; setResourcesState false false 285; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1343 693; setLocation 146 71; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #7552900335929230069 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #7552900335929230069; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1058 626; setLocation 146 71; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; showTaxa #3867241481151757061 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #3867241481151757061; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1058 626; setLocation 146 71; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.ManageTrees.ManageTrees; tell It; showTrees 0 #mesquite.lists.TreesList.TreesList; tell It; setTreeBlock 1; getWindow; tell It; newAssistant #mesquite.lists.NumForTreeList.NumForTreeList; tell It; suppress; setValueTask #mesquite.trees.NumberOfTaxa.NumberOfTaxa; desuppress; endTell; newAssistant #mesquite.lists.TreeListRooted.TreeListRooted; newAssistant #mesquite.lists.TreeListPolys.TreeListPolys; newAssistant #mesquite.lists.TreeListPolyAssumption.TreeListPolyAssumption; getTable; tell It; rowNamesWidth 295; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1058 626; setLocation 146 71; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TreesList.TreesListWindow.ibeam; endTell; endTell; showWindow; endTell; showTrees 1 #mesquite.lists.TreesList.TreesList; tell It; setTreeBlock 1; getWindow; tell It; newAssistant #mesquite.lists.NumForTreeList.NumForTreeList; tell It; suppress; setValueTask #mesquite.trees.NumberOfTaxa.NumberOfTaxa; desuppress; endTell; newAssistant #mesquite.lists.TreeListRooted.TreeListRooted; newAssistant #mesquite.lists.TreeListPolys.TreeListPolys; newAssistant #mesquite.lists.TreeListPolyAssumption.TreeListPolyAssumption; getTable; tell It; rowNamesWidth 384; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1058 626; setLocation 146 71; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TreesList.TreesListWindow.ibeam; endTell; endTell; showWindow; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #1524547846631877746 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTaxa #1524547846631877746; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 807.1368458570826.5593195373149847898; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1058 626; setLocation 146 71; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.reroot; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle on; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '((1:0.023814000000000002,(((((2:0.002687999999999996,3:0.0027764999999999943):0.004310999999999999,4:0.006140499999999997):7.46500000000011E-4,(5:0.004799499999999998,((((6:5.3499999999997994E-5,7:0.0015854999999999966):0.0016725000000000073,8:0.006212499999999999):6.224999999999981E-4,9:0.0022830000000000003):0.001006,10:0.0018255000000000042):0.0010319999999999982):0.0018895000000000092):8.37499999999991E-4,11:0.007240499999999997):0.0061440000000000106,(((12:0.003877499999999999,(13:0.003662000000000009,((14:0.0010205000000000075,15:0.004564000000000002):0.0012939999999999965,16:0.016863499999999997):0.0013390000000000069):0.0018474999999999915):0.0015529999999999988,(17:0.0022680000000000027,(18:0.0089745,(19:0.0037704999999999926,20:0.004865499999999998):0.0013205000000000022):3.670000000000062E-4):0.0021964999999999936):0.012248499999999999,21:0.020290999999999993):0.002471000000000015):0.02087499999999999):0.0294605,22:0.0294605);'; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; makeTreeWindow #3867241481151757061 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTaxa #3867241481151757061; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 836.1368458580661.6838134827367414988; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1058 626; setLocation 146 71; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.reroot; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '((2:0.024529,(((((3:0.001819,4:0.014246,5:0.005185):0.001433,6:0.003492):0.001887,(7:0.009998,(8:0.003864,9:0.00504):0.001929,10:0.003363):0.001153,11:0.004149):0.011905,12:0.020886):0.002405,((13:0.002822,14:0.002712):0.00491,15:0.006078,((16:0.002333,17:0.006789,(18:0.00201,19:5.99E-4):0.00202,20:0.0012):0.001232,21:0.005176):0.001228,22:0.006393):0.006284):0.019916):0.0274755,1:0.0274755);'; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #1313449396057576915 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1058 626; setLocation 146 71; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;